Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAATCAACCTGAGACCAACATGTAACATGAAGCATACATTACGTCATTACCAAGGGAGAGCAACGGAAGTCGATCAAAAGAGAGAGATAGTGTATAGATTCTACTGATAATTGGAAAAATGAAGTCTTTAGCAAGATGGTCTGTAGAAGAAGAAGAATTAGTAGCATGTTGTGGCAGCACCAAGTTCGCTAAACAAATGACTGCTTTATCCCCCTTTTCCCATCTTAATCACGCCGTTGAAGCTGCTAGAGACATCTGGTTCAACAAGGTCTCTCTTTTACCCATCTGGGCTTTACTCAAATTCTTTCCTTTTTCGCAATTATCTTCAAATTAATCAACAATTTTTTTTTTTGACAATTATTGATCAACAATTTTTGGTTGATGTATTTGTTGATTATTAATGTTGTAGATTGATGTTTGTGGATGGCTTGAAGCGTTCTCAGCTCATCCTCAGATTGGTCAATCTCCTTCCTCCTCACATGGCAGTGAGACCAGTGCCCAGTTGAGTCCTTTTCTCTCCTCTTTAGTTATGAAGAGTGTGTGAATTTGCAATTAATTTCAAAGAATGTTTTATTAGCTTTTTATGGGTTCTAGCCGATTTAATCAATTTTAGATGCTTTTGATTGTGTAATTGCTTGATTAGAAGACCTGTTAATTTGGATTAATGAGGATAGTGGGATCATAACTAGTAAGATTAGTTTGTGATCCTAATTCCCGAGAGAGATAGGCTTTCCGAATGAAGGGTTTGATTGGGGTTTATGCTGCTTGAACATTACTTTCACATTGAGTAAGACTATGTATGGTTGGCAAAGCTCTCTTGGATTGTATGTTTCCGTTTCCACTTCCACTTCCCTTTTTTTGTTTGTTTTATATACTACATTCACTAATAACTAATGTGAAAATATGGCTCGGCAGGTGGAGCAAGGGAGAGCAGTCAACTGCTATGAAATCAGCTACATCCACTACATTACAGGTTTATATATTTCAATTTGTAAATTATTGACAATGTACTAAGTTCAAGTTAGCAAAGTAAAGTCTATTGTCCCCTCAAAAAAAGAAAAGAAAGTAAAGTGTATAGTGATCCAAATTCCGTATGATAACCACCTGTCTGGTGAATTACCTGGTAGGTTGATCATAAGAATTCACTGTATAATCGATCATTTGTACTACAGACAACATAACTATGGCATATCAAATTTTTACTTACCATTCTTATTTTGGTGTTTATGTGTGCTGGATCTGTGAATTTTTGTTGTTTGGTGTTTACTCCTGGTATCTGTACTTGTGTTGGGCAGGAACTGGCCGAGTGGAATGCCCAATATAAGCTAAAGTTTGGGTTTGTCTTTCTTATTTGTGCATCAGGGAGGAGTACTGCAGAAATTCTGGCTGAATTGAAGGTGAAGTTCCTTTTTAAACTTTTGTAAAGGAAAGCTTGTCTTACAGCTAGTTTCTTAAATTCTAATGTTAATAGATTTTGGATTGATCGCAACTTCTTGAATTTCATTGGATCGTCTATTCTGAATTTGAGGACATGTTCAACTAACTATGTACTTCATATAACTTATTATTCTATTGTTAGGGAAGATTAAGGTGTGTTGCTGGCTTGTTGCTTGGTTCTTTTACTATTATTTGATTAAGTTAACATTCTGCTGAAACTATAATATTTTCCCAAGCTCAACGTTCTAATTTTGGACATAGCAAATAACAGTTCTTTTGAACTCAATTCATTTCTTAAAGCTTTCCGAAGAAATTTTCACGCTAAAATGAATACTTTTAGAAGAAAGAGGAAAAGCAATAGGTAAACAAATAACAATTTTTTCCTTGTCAAGGAGGGGGTAAGTGTGGAAGTTATCTTGTTCTTGAGACGATGTTTACTTTTGCTGATATCATATAGCTATATTATAATATGTTACATGGTAATCTTTTAGAGTTGGAAGTTCCATTGTTCAATACTTGCTAAAAGCATCACTTAACTTAACCGACTGGAGCTCGGAACAAATTTCTTTCTAACATACTGGAAGAGAATGAAACATGGAAGTTAATGAGGTTCAAAACCTCGGATCAGACACTGGGACCTTGTCCTAGGTTTGAGGGTTGAATCATAGTCCTAATTATAAAAGACTTTTGCAGGTCTGTTAACATTACAAATACATAATATAGTACATTCCAGAATTACTTTTTGTCTGGTTCTGGTCAGACTTGTTATCTCAATCCGATATGGCATAAATTTCTCTTGCTTCCCTTTTTTTAGCTCCAAAGGAAAGACAATCAAAGAATACGGTCGAGGAGGGAAACTAGCTGGCAAGAGTGTCTTCGTAGGTTTTCTACAAATATGGGGATCAAGATAATTGAGGTGTCTGGCTTAAAAGTTAAAACTAAAGTTTTGGGGGCAACAAAATAATCCTTGTCAGAGTAACATGGGTACTTAAGTTTTTTTTTTTTTGAGATAACATGGGTACTTAAGTTGAATACAAGATTCAAAGTAACATAGATTCCACATCATCACCATATGGCTGATGCGAGCTTTTGCTTTTCTGGAAGTTGTGTCTACATAAAGTATGAGACGTGTAATTTGCATTTGCAAACCATTCATGCTTTGCAAAAGAAAGCATTTGTTATCTGAAATTAGGGCAAAGTTTCCAAATAAACTTTAAGCTTTTAGGAGACCAATTGTAGCAGCATTCGTCCATATTTAGGGTGACATGTATGAGTCATACGAAGTATGTTTTGTTCACTTCTGAAGTTGATGGCTCTTGTTTACTGATTTACAGAGGCGCTACTCAAACAGGCCTGTAGTCGAGCTTGAAATAGCAGCCCAGGAACAGATGAAAATAACTGAACTGCGTCTTGCCAAACTCTTCTCAGCAAAATCAAGCCCTGCTGCAGCTACTGAATATGAACCTGCATCTGTCACCGCAAAAGCTAATGGTAATATGTTATTAGAAATGCTTTTACAGTGAGATTGTAGCTAGGTTTAAATGGTTTGATTTACTATACTAGCTCATGTGGAACAAATCAAAACCTAATTTGCCCTCAAAGCTGCCCAACTTTGCAGGTTAGAGGTTTGACTGCCTGTGATGGTTAATTTGTAATTAACCATTACTTAGTCATGATTAAATCAGATCACCTCAAATACACGTATGTCACTCACAAGTGCAGCTGCATGAGGCTCCAAATAACCTCTAACAATAGGCAAGAGATAAGCTTATGCATTCTGTCCATAACTGTGTGCTTCTGGTTTGACGTTCTATTCTGCCCCTGTATGGTCATATTGTTGTGAATTTAGACTCAAAATCTCCTTCCTTTTAGTTCAATTGACAAGCCACTTTAGGTTCCTATCAACTGCTAACTAGGTTTGTAAACCTAATTTGAGCTCAGCAGACCAACATGATTGCTCCCCTTTTTCACAGTAGTTGATCCCTCTGATCTTCTCCTTGCTGTTCATTTGATCAAACCTTTAATTTGTTTACAAAAAATATTCAAGATATTTGTTAACCTTTAATTTGTTTACAAAGAATATTCAAAAAAAGTTACTAAAGCACTGAGTTTTTCATCAACATTTCCTCCACATCATAGGACAAAGAGAAGTCTTGATGCAATTGATAGTCTTGTTATATAGGTGTGTATTAGAAGTGGGTCGTCCTTGACCCTCCAGGACTGAAGGTGAGATTTAGGAAATCAGAAAAGACAGTGCAGATAACATTGTAAGAAGGTATCCTACTGTTAACAGCTCAATCTTCATATACCGATTTCCTCTTGAGGTTCAATATCCTTTCCTCTGGATGGATCAGCTTCAGCCTCCAGAAGTGGAGGGATCTACGGCTATTCTTCTAGATAATCCTTCTAAGTTCCAAGTTTCTAACTTTGCAACTTTAATTCTGGCATTTATTCATTCAACTCACCTGTTTCCGAAATGCCTCAAACTGGGACCTATCAATTAAGCCATCAGTTGCCATCCTACTCTTTCGAGTGACTTCATAAAACCTACTGAAATCACTCTTTCGAGTGACTTCATAAAACCTTCTGAAATCTGCTGGGATCCACTTGTTCGAGTGACTTCGTAAAACCCCAGCATGGAAATTTCTATCATTAATTTCGCTGTTTCTACATATGAACATAGCAAAATCTGTGTATTGACCCTACATTGTTAATTGTTGTGTAATTTCTAACATCCATATCAGTTCACTACAACACCTATTAATCTGATATAGGTAGTTTCTAATCCTACAGCACCTGTCAAACTGCACTGTATTATCCTGGGCATGGCCGTATTCATGCTCCCTTTAACAACAACTGAAACTGTAAATTGTCATACCATTCATAACGCACAGAGTACTCTTGATCAATCTTGATTCTAGTTAAATTACAAAATGTTCTCTGCTTGCTTAGACAAATAAAAACTGTTCTCTGCTTGCTTAGACAAATGAAAACGGTTAATAGTACAAATCCTTGATGCTTATTTATGTGCTGTTTAACTTGTAGAAGATCGCCTGACCATGATTAATGCTCATCTCATCCCTGCATCTGAATCTGAATCTTCCGGAGAGAAAAAATCTCAAGTTCCAAAGAGGAACCGGCCACCCATCACCACCCATGTCCTCGATATGGCACGTGGTGGTCCCGGGTCAGGTATTGATGTACAATTGGATGTATGGAGGGGCCCGGAGCCTCGGCCTTCATTTCCCGGATCAGATCCAAGTGGTTGGACACTTGTGGGATCTGGTAAGACAGATGATGATGGTAGAAGTAACCCATTAATGAACATTGTTGATGCAGTAAGTCCTGGTATATACAAGATAAGTTTCAACACAGGCAAGTACAATCCCTCTGGGTTTTTTCCTTTCGTCTCTATAGTGTTTCAGATTACCGAGTCCCAGAAGTTCGAGCATTTTCACGTGCCACTGCTGCTAGCTCCTTTCGGGTTCTCAACTTATCGTGGAAGCTAGAAATTTAAACTTTTGTGGTTTATTTTCCTCACAAGGGAATTAGTGAGCTACTGAAAGCTGTTTGTTAAGACTGATTGGAAAATTGGTTTCATTTTTGTTAATAGTAAAATGTTTTACTCTGTTAAACCTCGAGACCTAATTCAGAGAGCTAATTATTTAGCACGGAATTAAGGTCTGATGTATACTTGGATAGTTAGATGATTTCTTCTCCGATGAATAGAGAAATGCACTTGATTTGAAGTATACTACGTATGTTGCAGCA GAGGAATCAACCTGAGACCAACATGTAACATGAAGCATACATTACGTCATTACCAAGGGAGAGCAACGGAAGTCGATCAAAAGAGAGAGATAGTGTATAGATTCTACTGATAATTGGAAAAATGAAGTCTTTAGCAAGATGGTCTGTAGAAGAAGAAGAATTAGTAGCATGTTGTGGCAGCACCAAGTTCGCTAAACAAATGACTGCTTTATCCCCCTTTTCCCATCTTAATCACGCCGTTGAAGCTGCTAGAGACATCTGGTTCAACAAGATTGATGTTTGTGGATGGCTTGAAGCGTTCTCAGCTCATCCTCAGATTGGTCAATCTCCTTCCTCCTCACATGGCAGTGAGACCAGTGCCCAGTGGAGCAAGGGAGAGCAGTCAACTGCTATGAAATCAGCTACATCCACTACATTACAGGAACTGGCCGAGTGGAATGCCCAATATAAGCTAAAGTTTGGGTTTGTCTTTCTTATTTGTGCATCAGGGAGGAGTACTGCAGAAATTCTGGCTGAATTGAAGAGGCGCTACTCAAACAGGCCTGTAGTCGAGCTTGAAATAGCAGCCCAGGAACAGATGAAAATAACTGAACTGCGTCTTGCCAAACTCTTCTCAGCAAAATCAAGCCCTGCTGCAGCTACTGAATATGAACCTGCATCTGTCACCGCAAAAGCTAATGAAGATCGCCTGACCATGATTAATGCTCATCTCATCCCTGCATCTGAATCTGAATCTTCCGGAGAGAAAAAATCTCAAGTTCCAAAGAGGAACCGGCCACCCATCACCACCCATGTCCTCGATATGGCACGTGGTGGTCCCGGGTCAGGTATTGATGTACAATTGGATGTATGGAGGGGCCCGGAGCCTCGGCCTTCATTTCCCGGATCAGATCCAAGTGGTTGGACACTTGTGGGATCTGGTAAGACAGATGATGATGGTAGAAGTAACCCATTAATGAACATTGTTGATGCAGTAAGTCCTGGTATATACAAGATAAGTTTCAACACAGGCAAGTACAATCCCTCTGGGTTTTTTCCTTTCGTCTCTATAGTGTTTCAGATTACCGAGTCCCAGAAGTTCGAGCATTTTCACGTGCCACTGCTGCTAGCTCCTTTCGGGTTCTCAACTTATCGTGGAAGCTAGAAATTTAAACTTTTGTGGTTTATTTTCCTCACAAGGGAATTAGTGAGCTACTGAAAGCTGTTTGTTAAGACTGATTGGAAAATTGGTTTCATTTTTGTTAATAGTAAAATGTTTTACTCTGTTAAACCTCGAGACCTAATTCAGAGAGCTAATTATTTAGCACGGAATTAAGGTCTGATGTATACTTGGATAGTTAGATGATTTCTTCTCCGATGAATAGAGAAATGCACTTGATTTGAAGTATACTACGTATGTTGCAGCA ATGAAGTCTTTAGCAAGATGGTCTGTAGAAGAAGAAGAATTAGTAGCATGTTGTGGCAGCACCAAGTTCGCTAAACAAATGACTGCTTTATCCCCCTTTTCCCATCTTAATCACGCCGTTGAAGCTGCTAGAGACATCTGGTTCAACAAGATTGATGTTTGTGGATGGCTTGAAGCGTTCTCAGCTCATCCTCAGATTGGTCAATCTCCTTCCTCCTCACATGGCAGTGAGACCAGTGCCCAGTGGAGCAAGGGAGAGCAGTCAACTGCTATGAAATCAGCTACATCCACTACATTACAGGAACTGGCCGAGTGGAATGCCCAATATAAGCTAAAGTTTGGGTTTGTCTTTCTTATTTGTGCATCAGGGAGGAGTACTGCAGAAATTCTGGCTGAATTGAAGAGGCGCTACTCAAACAGGCCTGTAGTCGAGCTTGAAATAGCAGCCCAGGAACAGATGAAAATAACTGAACTGCGTCTTGCCAAACTCTTCTCAGCAAAATCAAGCCCTGCTGCAGCTACTGAATATGAACCTGCATCTGTCACCGCAAAAGCTAATGAAGATCGCCTGACCATGATTAATGCTCATCTCATCCCTGCATCTGAATCTGAATCTTCCGGAGAGAAAAAATCTCAAGTTCCAAAGAGGAACCGGCCACCCATCACCACCCATGTCCTCGATATGGCACGTGGTGGTCCCGGGTCAGGTATTGATGTACAATTGGATGTATGGAGGGGCCCGGAGCCTCGGCCTTCATTTCCCGGATCAGATCCAAGTGGTTGGACACTTGTGGGATCTGGTAAGACAGATGATGATGGTAGAAGTAACCCATTAATGAACATTGTTGATGCAGTAAGTCCTGGTATATACAAGATAAGTTTCAACACAGGCAAGTACAATCCCTCTGGGTTTTTTCCTTTCGTCTCTATAGTGTTTCAGATTACCGAGTCCCAGAAGTTCGAGCATTTTCACGTGCCACTGCTGCTAGCTCCTTTCGGGTTCTCAACTTATCGTGGAAGCTAG MKSLARWSVEEEELVACCGSTKFAKQMTALSPFSHLNHAVEAARDIWFNKIDVCGWLEAFSAHPQIGQSPSSSHGSETSAQWSKGEQSTAMKSATSTTLQELAEWNAQYKLKFGFVFLICASGRSTAEILAELKRRYSNRPVVELEIAAQEQMKITELRLAKLFSAKSSPAAATEYEPASVTAKANEDRLTMINAHLIPASESESSGEKKSQVPKRNRPPITTHVLDMARGGPGSGIDVQLDVWRGPEPRPSFPGSDPSGWTLVGSGKTDDDGRSNPLMNIVDAVSPGIYKISFNTGKYNPSGFFPFVSIVFQITESQKFEHFHVPLLLAPFGFSTYRGS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00020.1 vs. NCBI nr
Match: gi|902182534|gb|KNA09940.1| (hypothetical protein SOVF_148950 [Spinacia oleracea]) HSP 1 Score: 676.8 bits (1745), Expect = 2.000e-191 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 1
BLAST of Spo00020.1 vs. NCBI nr
Match: gi|731360690|ref|XP_010691955.1| (PREDICTED: uric acid degradation bifunctional protein TTL isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 549.7 bits (1415), Expect = 3.700e-153 Identity = 278/340 (81.76%), Postives = 303/340 (89.12%), Query Frame = 1
BLAST of Spo00020.1 vs. NCBI nr
Match: gi|731360692|ref|XP_010691956.1| (PREDICTED: uric acid degradation bifunctional protein TTL isoform X3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 543.5 bits (1399), Expect = 2.600e-151 Identity = 277/340 (81.47%), Postives = 302/340 (88.82%), Query Frame = 1
BLAST of Spo00020.1 vs. NCBI nr
Match: gi|298204732|emb|CBI25230.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 449.1 bits (1154), Expect = 6.700e-123 Identity = 217/332 (65.36%), Postives = 274/332 (82.53%), Query Frame = 1
BLAST of Spo00020.1 vs. NCBI nr
Match: gi|359483124|ref|XP_003632908.1| (PREDICTED: uric acid degradation bifunctional protein TTL isoform X1 [Vitis vinifera]) HSP 1 Score: 449.1 bits (1154), Expect = 6.700e-123 Identity = 217/332 (65.36%), Postives = 274/332 (82.53%), Query Frame = 1
BLAST of Spo00020.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRR8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148950 PE=4 SV=1) HSP 1 Score: 676.8 bits (1745), Expect = 1.400e-191 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 1
BLAST of Spo00020.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BEQ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017020 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 2.600e-153 Identity = 278/340 (81.76%), Postives = 303/340 (89.12%), Query Frame = 1
BLAST of Spo00020.1 vs. UniProtKB/TrEMBL
Match: D7T3Z8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0018g01180 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 4.700e-123 Identity = 217/332 (65.36%), Postives = 274/332 (82.53%), Query Frame = 1
BLAST of Spo00020.1 vs. UniProtKB/TrEMBL
Match: W9R5C4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023859 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 6.800e-122 Identity = 225/330 (68.18%), Postives = 266/330 (80.61%), Query Frame = 1
BLAST of Spo00020.1 vs. UniProtKB/TrEMBL
Match: A0A0G2T3W9_PELHO (Transthyretin-like S-allantoin synthase protein OS=Pelargonium hortorum GN=TF PE=2 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 5.700e-121 Identity = 221/331 (66.77%), Postives = 265/331 (80.06%), Query Frame = 1
BLAST of Spo00020.1 vs. ExPASy Swiss-Prot
Match: TTHL_ARATH (Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.800e-99 Identity = 191/332 (57.53%), Postives = 244/332 (73.49%), Query Frame = 1
BLAST of Spo00020.1 vs. ExPASy Swiss-Prot
Match: HIUH_DANRE (5-hydroxyisourate hydrolase OS=Danio rerio GN=urah PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.000e-17 Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = 1
BLAST of Spo00020.1 vs. ExPASy Swiss-Prot
Match: HIUH_SALDU (5-hydroxyisourate hydrolase OS=Salmonella dublin GN=hiuH PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.200e-15 Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 1
BLAST of Spo00020.1 vs. ExPASy Swiss-Prot
Match: HIUH_SALTY (5-hydroxyisourate hydrolase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=hiuH PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.200e-15 Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 1
BLAST of Spo00020.1 vs. ExPASy Swiss-Prot
Match: HIUH_SALTI (5-hydroxyisourate hydrolase OS=Salmonella typhi GN=hiuH PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.200e-15 Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 1
BLAST of Spo00020.1 vs. TAIR (Arabidopsis)
Match: AT5G58220.1 (transthyretin-like protein) HSP 1 Score: 364.0 bits (933), Expect = 1.000e-100 Identity = 191/332 (57.53%), Postives = 244/332 (73.49%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00020.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00020.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00020.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo00020.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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