Spo00071 (gene) | SpinachBase

Overview


Name	Spo00071
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Histone H2B
Location	Super_scaffold_70 : 738681 .. 739127 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCTAAGGCAGAGAAGAAGCCAGCCGAAAAAAAGCCCGTGGAGGAGAAGAAGGCCGCCGCTGCCGAGAAGGCTCCGGCTGAGAAGAAGCCAAAGGCTGGCAAGAAGCTTCCGAAAGAAGCCGGAGCAGCCGCCGGCGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAAACCTACAAGATCTATATATTCAAGGTTCTCAAGCAAGTTCACCCTGACATTGGAATCTCCAGCAAGGCGATGAGCATCATGAACAGCTTTATCAACGACATCTTCGAAAAGCTTGCCCAGGAATCAGCCAGGCTTGCTCGCTACAACAAGAAGCCTACCATCACTTCTCGGGAGATTCAAACTGCTGTGAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCCGTTTCTGAAGGAACCAAGGCGGTTACCAAGTTCACCAGCTCTTAG

mRNA sequence

ATGGCGCCTAAGGCAGAGAAGAAGCCAGCCGAAAAAAAGCCCGTGGAGGAGAAGAAGGCCGCCGCTGCCGAGAAGGCTCCGGCTGAGAAGAAGCCAAAGGCTGGCAAGAAGCTTCCGAAAGAAGCCGGAGCAGCCGCCGGCGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAAACCTACAAGATCTATATATTCAAGGTTCTCAAGCAAGTTCACCCTGACATTGGAATCTCCAGCAAGGCGATGAGCATCATGAACAGCTTTATCAACGACATCTTCGAAAAGCTTGCCCAGGAATCAGCCAGGCTTGCTCGCTACAACAAGAAGCCTACCATCACTTCTCGGGAGATTCAAACTGCTGTGAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCCGTTTCTGAAGGAACCAAGGCGGTTACCAAGTTCACCAGCTCTTAG

Coding sequence (CDS)

ATGGCGCCTAAGGCAGAGAAGAAGCCAGCCGAAAAAAAGCCCGTGGAGGAGAAGAAGGCCGCCGCTGCCGAGAAGGCTCCGGCTGAGAAGAAGCCAAAGGCTGGCAAGAAGCTTCCGAAAGAAGCCGGAGCAGCCGCCGGCGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAAACCTACAAGATCTATATATTCAAGGTTCTCAAGCAAGTTCACCCTGACATTGGAATCTCCAGCAAGGCGATGAGCATCATGAACAGCTTTATCAACGACATCTTCGAAAAGCTTGCCCAGGAATCAGCCAGGCTTGCTCGCTACAACAAGAAGCCTACCATCACTTCTCGGGAGATTCAAACTGCTGTGAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCCGTTTCTGAAGGAACCAAGGCGGTTACCAAGTTCACCAGCTCTTAG

Protein sequence

MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00071.1	Spo00071.1	mRNA

Homology

[Close]

BLAST of Spo00071.1 vs. NCBI nr
Match: gi|902184879|gb|KNA10386.1| (hypothetical protein SOVF_144860 [Spinacia oleracea])

HSP 1 Score: 263.5 bits (672), Expect = 2.300e-67
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. NCBI nr
Match: gi|902185838|gb|KNA10559.1| (hypothetical protein SOVF_143230 [Spinacia oleracea])

HSP 1 Score: 261.9 bits (668), Expect = 6.600e-67
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. NCBI nr
Match: gi|902233045|gb|KNA22906.1| (hypothetical protein SOVF_029910 [Spinacia oleracea])

HSP 1 Score: 258.5 bits (659), Expect = 7.300e-66
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. NCBI nr
Match: gi|657986068|ref|XP_008385152.1| (PREDICTED: probable histone H2B.1 [Malus domestica])

HSP 1 Score: 253.1 bits (645), Expect = 3.100e-64
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKK+A AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSAVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. NCBI nr
Match: gi|731349096|ref|XP_010685820.1| (PREDICTED: probable histone H2B.1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 251.9 bits (642), Expect = 6.900e-64
Identity = 145/149 (97.32%), Postives = 146/149 (97.99%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149

[Close]

BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV24_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_037580 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.600e-67
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTH0_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_143230 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.600e-67
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTN1_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_029910 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 5.100e-66
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUQ7_BETVU (Histone H2B OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174410 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.800e-64
Identity = 145/149 (97.32%), Postives = 146/149 (97.99%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149

[Close]

BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: M5WKF6_PRUPE (Histone H2B OS=Prunus persica GN=PRUPE_ppa012932mg PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.300e-64
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKK+  AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 245.7 bits (626), Expect = 3.100e-64
Identity = 137/148 (92.57%), Postives = 141/148 (95.27%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK EKKPAEKKP EEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 245.0 bits (624), Expect = 5.300e-64
Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKA  AEKAPAEKKPKAGKKLPKE GAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAV-AEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]

BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B2_MEDTR (Probable histone H2B.2 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 241.9 bits (616), Expect = 4.500e-63
Identity = 135/148 (91.22%), Postives = 139/148 (93.92%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK EKKPAEKKP EEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKL QES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKH VSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHDVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 233.8 bits (595), Expect = 1.200e-60
Identity = 136/148 (91.89%), Postives = 139/148 (93.92%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPVEEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 229.6 bits (584), Expect = 2.300e-59
Identity = 134/151 (88.74%), Postives = 139/151 (92.05%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAEKKP  EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT3G46030.1 (Histone superfamily protein)

HSP 1 Score: 233.8 bits (595), Expect = 6.800e-62
Identity = 136/148 (91.89%), Postives = 139/148 (93.92%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPVEEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 229.6 bits (584), Expect = 1.300e-60
Identity = 134/151 (88.74%), Postives = 139/151 (92.05%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAEKKP  EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT3G45980.1 (Histone superfamily protein)

HSP 1 Score: 227.3 bits (578), Expect = 6.400e-60
Identity = 133/151 (88.08%), Postives = 138/151 (91.39%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAP+AEKKPAEKKP  EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 221.9 bits (564), Expect = 2.700e-58
Identity = 133/153 (86.93%), Postives = 138/153 (90.20%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKK-----PVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHK 60
           MAP+AEKKPAEKK     PVEE K  AAEKAPAEKKPKAGKKLP +    AGDKKKKR K
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENK--AAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSK 60

Query: 61  KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITS 120
           K+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES++LARYNKKPTITS
Sbjct: 61  KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITS 120

Query: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 220.3 bits (560), Expect = 7.800e-58
Identity = 129/151 (85.43%), Postives = 134/151 (88.74%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPVEEKKAA---AAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKA KKPAEKKP E+  A     AEKAPAEKKPKAGKKLPKEA     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

The following BLAST results are available for this feature:

BLAST of Spo00071.1 vs. NCBI nr
BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
BLAST of Spo00071.1 vs. TAIR (Arabidopsis)

BLAST of Spo00071.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902184879\|gb\|KNA10386.1\|	2.3e-67	100.	hypothetical protein SOVF_1448...	[more]
gi\|902185838\|gb\|KNA10559.1\|	6.6e-67	99.3	hypothetical protein SOVF_1432...	[more]
gi\|902233045\|gb\|KNA22906.1\|	7.3e-66	97.9	hypothetical protein SOVF_0299...	[more]
gi\|657986068\|ref\|XP_008385152.1\|	3.1e-64	95.9	PREDICTED: probable histone H2...	[more]
gi\|731349096\|ref\|XP_010685820.1\|	6.9e-64	97.3	PREDICTED: probable histone H2...	[more]

BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QV24_SPIOL	1.6e-67	100.	Histone H2B OS=Spinacia olerac...	[more]
A0A0K9QTH0_SPIOL	4.6e-67	99.3	Histone H2B OS=Spinacia olerac...	[more]
A0A0K9RTN1_SPIOL	5.1e-66	97.9	Histone H2B OS=Spinacia olerac...	[more]
A0A0J8BUQ7_BETVU	4.8e-64	97.3	Histone H2B OS=Beta vulgaris s...	[more]
M5WKF6_PRUPE	6.3e-64	95.2	Histone H2B OS=Prunus persica ...	[more]

BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
H2B1_MEDTR	3.1e-64	92.5	Probable histone H2B.1 OS=Medi...	[more]
H2B_GOSHI	5.3e-64	94.5	Histone H2B OS=Gossypium hirsu...	[more]
H2B2_MEDTR	4.5e-63	91.2	Probable histone H2B.2 OS=Medi...	[more]
H2B7_ARATH	1.2e-60	91.8	Histone H2B.7 OS=Arabidopsis t...	[more]
H2B11_ARATH	2.3e-59	88.7	Histone H2B.11 OS=Arabidopsis ...	[more]

BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G46030.1	6.8e-62	91.8	Histone superfamily protein	[more]
AT5G59910.1	1.3e-60	88.7	Histone superfamily protein	[more]
AT3G45980.1	6.4e-60	88.0	Histone superfamily protein	[more]
AT1G07790.1	2.7e-58	86.9	Histone superfamily protein	[more]
AT2G28720.1	7.8e-58	85.4	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 132..145 score: 6.1E-49coord: 61..79 score: 6.1E-49coord: 80..100 score: 6.1E-49coord: 102..119 score: 6.1E-49coord: 119..132 score: 6.1
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 19..148 score: 1.4E
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 51..147 score: 2.7
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 116..138 scor
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 4..124 score: 4.9
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 27..148 score: 4.2
IPR009072	Histone-fold	unknown	SSF47113	Histone-fold	coord: 32..148 score: 5.97
None	No IPR available	unknown	Coil	Coil	coord: 90..110 scor

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016458	gene silencing
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0008283	cell proliferation
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006306	DNA methylation
biological_process	GO:0006270	DNA replication initiation
biological_process	GO:0006268	DNA unwinding involved in DNA replication
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0051726	regulation of cell cycle
cellular_component	GO:0005657	replication fork
cellular_component	GO:0042555	MCM complex
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003678	DNA helicase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo27245	0.83	Barchart \| Table
Spo12458	0.83	Barchart \| Table
Spo11594	0.83	Barchart \| Table
Spo11593	0.82	Barchart \| Table
Spo03241	0.82	Barchart \| Table
Spo16871	0.79	Barchart \| Table
Spo16627	0.79	Barchart \| Table
Spo12255	0.78	Barchart \| Table
Spo11592	0.78	Barchart \| Table
Spo28289	0.78	Barchart \| Table
Spo24600	0.77	Barchart \| Table
Spo18049	0.77	Barchart \| Table
Spo08589	0.77	Barchart \| Table
Spo06681	0.77	Barchart \| Table
Spo25954	0.77	Barchart \| Table
Spo18103	0.76	Barchart \| Table
Spo13378	0.76	Barchart \| Table
Spo26318	0.76	Barchart \| Table
Spo00073	0.75	Barchart \| Table
Spo19869	0.75	Barchart \| Table
Spo25851	0.75	Barchart \| Table
Spo27347	0.75	Barchart \| Table
Spo00076	0.74	Barchart \| Table
Spo13723	0.74	Barchart \| Table
Spo09819	0.74	Barchart \| Table
Spo15603	0.74	Barchart \| Table
Spo17771	0.74	Barchart \| Table
Spo04282	0.74	Barchart \| Table
Spo10736	0.74	Barchart \| Table
Spo21419	0.74	Barchart \| Table
Spo21762	0.73	Barchart \| Table
Spo26101	0.73	Barchart \| Table
Spo19401	0.73	Barchart \| Table
Spo06487	0.73	Barchart \| Table
Spo22592	0.73	Barchart \| Table
Spo06673	0.73	Barchart \| Table
Spo12394	0.73	Barchart \| Table
Spo00689	0.73	Barchart \| Table
Spo17110	0.72	Barchart \| Table
Spo16579	0.72	Barchart \| Table
Spo02912	0.72	Barchart \| Table
Spo05455	0.72	Barchart \| Table
Spo05849	0.72	Barchart \| Table
Spo28152	0.72	Barchart \| Table
Spo06897	0.72	Barchart \| Table
Spo23082	0.72	Barchart \| Table
Spo22270	0.72	Barchart \| Table
Spo20208	0.72	Barchart \| Table
Spo19887	0.72	Barchart \| Table
Spo06589	0.71	Barchart \| Table
Spo24754	0.71	Barchart \| Table
Spo25181	0.71	Barchart \| Table
Spo12395	0.71	Barchart \| Table
Spo25289	0.71	Barchart \| Table
Spo05880	0.71	Barchart \| Table
Spo08451	0.71	Barchart \| Table
Spo08214	0.71	Barchart \| Table
Spo24594	0.70	Barchart \| Table
Spo09584	0.70	Barchart \| Table
Spo14317	0.70	Barchart \| Table
Spo28070	0.70	Barchart \| Table
Spo21288	0.70	Barchart \| Table
Spo21179	0.70	Barchart \| Table
Spo25615	0.70	Barchart \| Table
Spo11595	0.70	Barchart \| Table
Spo13856	0.70	Barchart \| Table
Spo25616	0.70	Barchart \| Table
Spo26232	0.70	Barchart \| Table
Spo12598	0.70	Barchart \| Table
Spo27115	0.70	Barchart \| Table
Spo15604	0.70	Barchart \| Table
Spo08905	0.70	Barchart \| Table
Spo23707	0.70	Barchart \| Table
Spo25445	0.70	Barchart \| Table
Spo20917	0.69	Barchart \| Table
Spo25915	0.69	Barchart \| Table
Spo00854	0.69	Barchart \| Table
Spo11229	0.69	Barchart \| Table
Spo06444	0.69	Barchart \| Table
Spo02163	0.69	Barchart \| Table
Spo13731	0.69	Barchart \| Table
Spo12195	0.69	Barchart \| Table
Spo13412	0.69	Barchart \| Table
Spo05127	0.69	Barchart \| Table
Spo04216	0.68	Barchart \| Table
Spo01914	0.68	Barchart \| Table
Spo03708	0.68	Barchart \| Table
Spo03908	0.68	Barchart \| Table
Spo00007	0.68	Barchart \| Table
Spo06726	0.68	Barchart \| Table
Spo06731	0.68	Barchart \| Table
Spo09940	0.68	Barchart \| Table
Spo11015	0.68	Barchart \| Table
Spo12593	0.68	Barchart \| Table
Spo16097	0.68	Barchart \| Table
Spo16842	0.68	Barchart \| Table
Spo17242	0.68	Barchart \| Table
Spo17638	0.68	Barchart \| Table
Spo17887	0.68	Barchart \| Table
Spo18269	0.68	Barchart \| Table
Spo18962	0.68	Barchart \| Table
Spo27223	0.68	Barchart \| Table
Spo05589	0.67	Barchart \| Table
Spo12128	0.67	Barchart \| Table
Spo14192	0.67	Barchart \| Table
Spo01086	0.67	Barchart \| Table
Spo25072	0.67	Barchart \| Table
Spo06331	0.67	Barchart \| Table
Spo23192	0.67	Barchart \| Table
Spo10615	0.67	Barchart \| Table
Spo21505	0.67	Barchart \| Table
Spo00468	0.67	Barchart \| Table
Spo07652	0.67	Barchart \| Table
Spo17118	0.67	Barchart \| Table
Spo09793	0.67	Barchart \| Table
Spo26737	0.67	Barchart \| Table
Spo22961	0.67	Barchart \| Table
Spo21206	0.66	Barchart \| Table
Spo10576	0.66	Barchart \| Table
Spo21812	0.66	Barchart \| Table
Spo22069	0.66	Barchart \| Table
Spo22326	0.66	Barchart \| Table
Spo02032	0.66	Barchart \| Table
Spo13953	0.66	Barchart \| Table
Spo13630	0.66	Barchart \| Table
Spo17124	0.66	Barchart \| Table
Spo17393	0.66	Barchart \| Table
Spo17676	0.66	Barchart \| Table
Spo17755	0.66	Barchart \| Table
Spo13522	0.66	Barchart \| Table
Spo13004	0.66	Barchart \| Table
Spo18465	0.66	Barchart \| Table
Spo19325	0.66	Barchart \| Table
Spo12911	0.66	Barchart \| Table
Spo12391	0.66	Barchart \| Table
Spo11882	0.66	Barchart \| Table
Spo11516	0.66	Barchart \| Table
Spo23497	0.66	Barchart \| Table
Spo09579	0.66	Barchart \| Table
Spo23710	0.66	Barchart \| Table
Spo09563	0.66	Barchart \| Table
Spo08968	0.66	Barchart \| Table
Spo08894	0.66	Barchart \| Table
Spo05968	0.66	Barchart \| Table
Spo05126	0.66	Barchart \| Table
Spo04645	0.66	Barchart \| Table
Spo02790	0.66	Barchart \| Table
Spo01204	0.66	Barchart \| Table
Spo15363	0.66	Barchart \| Table
Spo15666	0.66	Barchart \| Table
Spo16353	0.66	Barchart \| Table
Spo07094	0.65	Barchart \| Table
Spo00751	0.65	Barchart \| Table
Spo14160	0.65	Barchart \| Table
Spo00780	0.65	Barchart \| Table
Spo09803	0.65	Barchart \| Table
Spo10291	0.65	Barchart \| Table
Spo10827	0.65	Barchart \| Table
Spo14514	0.65	Barchart \| Table
Spo17547	0.65	Barchart \| Table
Spo02886	0.65	Barchart \| Table
Spo24104	0.65	Barchart \| Table
Spo13609	0.65	Barchart \| Table
Spo02189	0.65	Barchart \| Table
Spo16106	0.65	Barchart \| Table
Spo11033	0.65	Barchart \| Table
Spo25104	0.65	Barchart \| Table
Spo00694	0.65	Barchart \| Table
Spo25205	0.65	Barchart \| Table