Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGCCGTATGAGATAACTACAAGATGGACTATGGTGATGACATTTGTTCTTTTGCCGTGGAAACCAGAATTGGTCTTCACCGGAACTTCAGTAATGGGCATTAACCCTGAAACAGGAAAATTCTGTAGTCATGTGGTAAGCTTTATCACCATGTCAATCAATAAATTTTGGTGTATATTGTCCTAAAACAACCTTATACGGAGTATGAACATCGCTGATGTACGTTGTGGAATATGTAGGATTACTGGGATTCTATAAAGGCGAATGACTATTTTTCGGTAGAAGGCTTATGGGACGTGTTTAGACAGGTATTGGCTCTTTATTAGTACAATGACTTTTGTCATGTGTTCTCAGCTAATTAATATAACTAAACACACTCCTTAATGCAGCTTCGGTTGTACAAGACACCAGACTTGGAAAAACCTGAATATCAGATACTGAAAAGAGCTGCAGACTATGAGGTTAGCTTCTCTGAGTCTGTACATTAGTGGACTAACGGTTTTATATTAGTGGACTAATGGTTCTCTGAGTCGGTTGTACTGCTTGGTTTGTGAGTGAAGTTCCATATAACACATTTCTTTACATTCTTGCGTAAGGTAATTCATTAAAGGCGGGTAAGAAGGCTTATGTATGATTCCTTTACTAACAAATTGGAACCACGTGATAGGGTTTAGTGAATAGTCTTGTAGTCTTGTATACAACGGCTGTATTTGTTTACAGTGGGCTTAATCACCCCAAATTTCACAAATGTCACGTATTATCTTTGTCCCTTTTATCTTCTATGAGTGGTGGTAGAAAACGGATCCTTCTTGTTGAGATATATACACCCTCTTCCTGCTATTTTAGTTACTTGAATCTAAACTGTGATCTTGATGAGAGTAAAGTCACATTTCTGACAGCCCTGCTTGCTATTTTCATGCAAAAACACAGGTAAGAAGGTATTCCCCGTTTTTGGTTGTAGAAACTCAGGGTGACAAGCTTTCTGGATCAACTGGCTTCAATTCCGTTGCTGGGTAAGTGTTGGTCCAACTGATACCATCTGTTAAACTAGCGTTCCACAATAATAAGCAGTGAGAATTTTTCTGATCTCCAGTTACATATTTGGAAAGAACTCCAAAGAAGAGAAGATACCTATGACTACCCCTGTCTTCACTGAGACCAATGATGTTGGACAGTCGAAAGTGGCCATTCAGATAGTCCTTCCACAAGACAAAGACCTCGAAAGGTGTGATTCTAATCTCCTAGAAAACCTTAGCTATCAGAATTCACTTTATTCCCTCAGTGCTAATAGTCTGTCAAGCTTCATAAAAGGAAAGGGATTCCACAAAGGACTACCTTGTTGTCACAAATTTTATATAAGGCGGTCTTACACAAAAGACCACTTTGTTGTCATATAAGTTAAGCAATGAAATCAATTAATTAAGCACTGAAACCAATTAGTTAAGCAACAAAGTGGTCTTTACGGTAAAAAGTTGTTGTATTCCTTATACATCCTTCATTATTTTGGTTAATGTATCATCAAATTTACGTTAAATTTGAACTTTAACTTGTCAATTTGATAAAGTTGACTACGAAGTATTATTTAAAGACGGCCTAATATAGAAAAGTGGTCTATTATTTTGAGACAGACGGAGTATCATCAAGTTTTTGCATTATCATTCAACAGTACGGGTGCTTAGCAACATATCTTACACTCTACAATAAGTTGTTTTGTGTACGTTTTAGACTATTATTCACTAGCAAGTTCTTCGAATGGAGGACTGCCAACTACTAATTGTAAACAAAGGCTTGTTTGTATGGCTAACTTGGGCAAATGTGTGCAGTTTGCCTGACCCTAATCAAGACACGATCAGCCTGAGGAAGGTAGAAGGAGGTATTGCTGCAGTACTGAAATTCAGCGGAAAACCTACAGAGGACATTGTCAGACAAAAAGAAAAAGAACTTCGCGATAGTCTAATTAGGGATGGCCTCGTACCAAGAAAAGGGTGCCTGTTTGCTCGCTACAATGATCCAGGCCGAACCTGGGAGTTCATTATGGTAACATACATTTTTCTTTTATGCAAATTCAGCATTTGTGAAACATTTTTCTTGATTACAGGTTCTTACTATTGTTCTGTTTTTTTTTTATCTTTTGATTTTTGGTGGTCGTAATGAAGAGGAATGAGGTGCTGATATGGCTTGAAGATTTTAGTTTAGAGTAG GGCCGTATGAGATAACTACAAGATGGACTATGGTGATGACATTTGTTCTTTTGCCGTGGAAACCAGAATTGGTCTTCACCGGAACTTCAGTAATGGGCATTAACCCTGAAACAGGAAAATTCTGTAGTCATGTGGATTACTGGGATTCTATAAAGGCGAATGACTATTTTTCGGTAGAAGGCTTATGGGACGTGTTTAGACAGCTTCGGTTGTACAAGACACCAGACTTGGAAAAACCTGAATATCAGATACTGAAAAGAGCTGCAGACTATGAGGTAAGAAGGTATTCCCCGTTTTTGGTTGTAGAAACTCAGGGTGACAAGCTTTCTGGATCAACTGGCTTCAATTCCGTTGCTGGTTACATATTTGGAAAGAACTCCAAAGAAGAGAAGATACCTATGACTACCCCTGTCTTCACTGAGACCAATGATGTTGGACAGTCGAAAGTGGCCATTCAGATAGTCCTTCCACAAGACAAAGACCTCGAAAGTTTGCCTGACCCTAATCAAGACACGATCAGCCTGAGGAAGGTAGAAGGAGGTATTGCTGCAGTACTGAAATTCAGCGGAAAACCTACAGAGGACATTGTCAGACAAAAAGAAAAAGAACTTCGCGATAGTCTAATTAGGGATGGCCTCGTACCAAGAAAAGGGTGCCTGTTTGCTCGCTACAATGATCCAGGCCGAACCTGGGAGTTCATTATGAGGAATGAGGTGCTGATATGGCTTGAAGATTTTAGTTTAGAGTAG ATGGTGATGACATTTGTTCTTTTGCCGTGGAAACCAGAATTGGTCTTCACCGGAACTTCAGTAATGGGCATTAACCCTGAAACAGGAAAATTCTGTAGTCATGTGGATTACTGGGATTCTATAAAGGCGAATGACTATTTTTCGGTAGAAGGCTTATGGGACGTGTTTAGACAGCTTCGGTTGTACAAGACACCAGACTTGGAAAAACCTGAATATCAGATACTGAAAAGAGCTGCAGACTATGAGGTAAGAAGGTATTCCCCGTTTTTGGTTGTAGAAACTCAGGGTGACAAGCTTTCTGGATCAACTGGCTTCAATTCCGTTGCTGGTTACATATTTGGAAAGAACTCCAAAGAAGAGAAGATACCTATGACTACCCCTGTCTTCACTGAGACCAATGATGTTGGACAGTCGAAAGTGGCCATTCAGATAGTCCTTCCACAAGACAAAGACCTCGAAAGTTTGCCTGACCCTAATCAAGACACGATCAGCCTGAGGAAGGTAGAAGGAGGTATTGCTGCAGTACTGAAATTCAGCGGAAAACCTACAGAGGACATTGTCAGACAAAAAGAAAAAGAACTTCGCGATAGTCTAATTAGGGATGGCCTCGTACCAAGAAAAGGGTGCCTGTTTGCTCGCTACAATGATCCAGGCCGAACCTGGGAGTTCATTATGAGGAATGAGGTGCTGATATGGCTTGAAGATTTTAGTTTAGAGTAG MVMTFVLLPWKPELVFTGTSVMGINPETGKFCSHVDYWDSIKANDYFSVEGLWDVFRQLRLYKTPDLEKPEYQILKRAADYEVRRYSPFLVVETQGDKLSGSTGFNSVAGYIFGKNSKEEKIPMTTPVFTETNDVGQSKVAIQIVLPQDKDLESLPDPNQDTISLRKVEGGIAAVLKFSGKPTEDIVRQKEKELRDSLIRDGLVPRKGCLFARYNDPGRTWEFIMRNEVLIWLEDFSLE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00165.1 vs. NCBI nr
Match: gi|902166877|gb|KNA07285.1| (hypothetical protein SOVF_173330, partial [Spinacia oleracea]) HSP 1 Score: 492.3 bits (1266), Expect = 4.900e-136 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
BLAST of Spo00165.1 vs. NCBI nr
Match: gi|731353504|ref|XP_010688101.1| (PREDICTED: uncharacterized protein LOC104902117 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 451.1 bits (1159), Expect = 1.200e-123 Identity = 215/239 (89.96%), Postives = 228/239 (95.40%), Query Frame = 1
BLAST of Spo00165.1 vs. NCBI nr
Match: gi|567918020|ref|XP_006451016.1| (hypothetical protein CICLE_v10008577mg [Citrus clementina]) HSP 1 Score: 409.1 bits (1050), Expect = 5.400e-111 Identity = 195/239 (81.59%), Postives = 214/239 (89.54%), Query Frame = 1
BLAST of Spo00165.1 vs. NCBI nr
Match: gi|802640188|ref|XP_012078703.1| (PREDICTED: uncharacterized protein LOC105639302 [Jatropha curcas]) HSP 1 Score: 407.5 bits (1046), Expect = 1.600e-110 Identity = 190/239 (79.50%), Postives = 215/239 (89.96%), Query Frame = 1
BLAST of Spo00165.1 vs. NCBI nr
Match: gi|1009160080|ref|XP_015898161.1| (PREDICTED: uncharacterized protein LOC107431695 [Ziziphus jujuba]) HSP 1 Score: 407.1 bits (1045), Expect = 2.100e-110 Identity = 185/239 (77.41%), Postives = 216/239 (90.38%), Query Frame = 1
BLAST of Spo00165.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJ51_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_173330 PE=4 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 3.400e-136 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
BLAST of Spo00165.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BSU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g195330 PE=4 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 8.700e-124 Identity = 215/239 (89.96%), Postives = 228/239 (95.40%), Query Frame = 1
BLAST of Spo00165.1 vs. UniProtKB/TrEMBL
Match: V4UPA4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008577mg PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 3.800e-111 Identity = 195/239 (81.59%), Postives = 214/239 (89.54%), Query Frame = 1
BLAST of Spo00165.1 vs. UniProtKB/TrEMBL
Match: A0A067K7Y8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13271 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.100e-110 Identity = 190/239 (79.50%), Postives = 215/239 (89.96%), Query Frame = 1
BLAST of Spo00165.1 vs. UniProtKB/TrEMBL
Match: A0A067GNW2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016453mg PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 1.900e-110 Identity = 194/239 (81.17%), Postives = 212/239 (88.70%), Query Frame = 1
BLAST of Spo00165.1 vs. ExPASy Swiss-Prot
Match: HBPL1_ARATH (Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana GN=At3g10130 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.900e-18 Identity = 66/196 (33.67%), Postives = 103/196 (52.55%), Query Frame = 1
BLAST of Spo00165.1 vs. ExPASy Swiss-Prot
Match: HEBP2_MOUSE (Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.600e-6 Identity = 49/193 (25.39%), Postives = 85/193 (44.04%), Query Frame = 1
BLAST of Spo00165.1 vs. ExPASy Swiss-Prot
Match: HEBP2_HUMAN (Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.800e-6 Identity = 45/164 (27.44%), Postives = 68/164 (41.46%), Query Frame = 1
BLAST of Spo00165.1 vs. TAIR (Arabidopsis)
Match: AT5G20140.2 (SOUL heme-binding family protein) HSP 1 Score: 347.4 bits (890), Expect = 6.800e-96 Identity = 165/236 (69.92%), Postives = 196/236 (83.05%), Query Frame = 1
BLAST of Spo00165.1 vs. TAIR (Arabidopsis)
Match: AT3G10130.1 (SOUL heme-binding family protein) HSP 1 Score: 94.4 bits (233), Expect = 1.000e-19 Identity = 66/196 (33.67%), Postives = 103/196 (52.55%), Query Frame = 1
BLAST of Spo00165.1 vs. TAIR (Arabidopsis)
Match: AT2G37970.1 (SOUL heme-binding family protein) HSP 1 Score: 64.3 bits (155), Expect = 1.200e-10 Identity = 62/211 (29.38%), Postives = 91/211 (43.13%), Query Frame = 1
BLAST of Spo00165.1 vs. TAIR (Arabidopsis)
Match: AT1G78460.1 (SOUL heme-binding family protein) HSP 1 Score: 55.5 bits (132), Expect = 5.400e-8 Identity = 48/205 (23.41%), Postives = 81/205 (39.51%), Query Frame = 1
BLAST of Spo00165.1 vs. TAIR (Arabidopsis)
Match: AT1G17100.1 (SOUL heme-binding family protein) HSP 1 Score: 52.4 bits (124), Expect = 4.600e-7 Identity = 37/141 (26.24%), Postives = 65/141 (46.10%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00165.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00165.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00165.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo00165.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
Co-expression
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