Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCCTATTAGCGTCGCAGTTCCGTCAGATAACTGGTATGCAAGTAAGAAAATAGTGTTTGAAATTATTTTTGTATGCTTAAGAAAGATTGAGATGTGTTGGCGAGAATGTAAGAATGAAGAATGAACGAGGATGCCTATTTATAGTCCCCTAAGTGTAGAACATTCTTCCTCTCGAATATTCTACACTACTTTATACAAGATCTAATTAACTAGTTTAATTTTGATTTCGGAAGATGATCTGGGTCATTACATGGATAAATATAACCCTTATGTAAAATAAAATATAAAATTGATTGGATTCCACGATTAATTTGATTGTCTTTATTGTTCCAATATTTTATTTGGAAAAGAATATATGATATAAGTGTATTATTTATTGTTAAAAAATTAAGCTCAAGAAGATTTCATAAACCGCTCAATCAATGGACTGCCCAAAACAAGAAAATGAGCGTAAAGTTAAAAGGGGAGAAACAGGGGTGCTGGGGCCATGCCACCGGGGCGACCACACAGGGCCCCTCAAAATAAAGGGCCCCCAAATTTTAGATATGAATTTAAGTTATCCTACTGAGATAAAGAGTACAGCACGATGGTTAAGTGATAAGCTATATGACCTAAAAGTCCCACATTCGAATCAAAAGTAGTAGTTTTTTTTGTTTTTTTAAGAAAAATATGTTGTTGTACAGTTGTACTCCATGATTATTACTCCTAGCTTCCTAGGTTATAACGCTTTTACTCGTTTATCTCTCCTCTTCGGCTCTTCCAAGCGAATATTAAAAAAAATGATAGTTCTCAATTTTTGTGTTGTTTTGATTATCAGGGGTTATGTAACTTTTCATAGATTTAAAGAATGTTTAAGGCTTTAATCCTTTTCAAGTTTTCGCTTTGCAGTAATTCGCCAATCCGGTGTTGTCTTATCTTCCTCGTCTTAATTTATTAACTAGATTATGTTTTAATACTTACTTTTTACGTTTGAATTGTTATTTGACACTTTAGATATATTCAAGTAGTCAATACAAAAAGCCCTAATTTTTTTTAAAATTGCACAGGACCCCCATTTACTTTGCCCCGCCCCTGGGGAGAAAATCTAAATTTTGAAACCATTTTCCAAAAATTTCAAATTGGCTTAATTACTCTTAAATTGATGCACTAAATAACTAAGAGTATTTATGAATGCCAAAATTTTAATCCTAAATACAATAAGGGTTACTGGTTAAGATTAAGGGCTTGTATGCAATAGGTCGTAACAGATTTGTACCCCTCCATCCTATTTTGTAATACTTCAGTTGTTTTCTACTCCCTCCGTTTCAAAATGTTTGTTACGTATTCCTTTAATAGTGTTTCAAAATGTTTGTTACATAAAGAATCTTTCTATTTATAAACTTGTTACTATTATTATTTTTTGAGCCAACTTTTATTTCTAATTGGTCCAAATTTTCAACTCAATAAATCTCATGCAACCAAAAGTCACATTATGACAAGTTAGCAATCCATGTGATTTTTAATTATTGGTTCATTTTGATAATAAAACAATCGTATTGGTTGTTTCAATGCTTAGTGGATTCAGGTATATTTTTTTTAATAAAAGATGAAAGCAGATTTGCACTATATTCAAAGAGAGTAATAAATGTCAGAATTTGGAAAGATGGAATCAGATTTTATGATGGAATCTAGAACATTTAAAATTATAAAAAAAATCTTAATTGTACGTTAATAAACGTGCCAAAATCCAAACGTAACAAACATTTTGAAACGGAGGGAGTAATTGTAACAACACTTTCCTAAAACTTCAATTTCCTTTTAGTTGTGAGTACTATTTTTGGTCACTTTTTAGTATTAAAATTACAATGTTACCCTTATTCCTTTACTTTTGCTCAATTCACTATCTGAGTGGGAACCAAAAAGTCCAAAGCCCACTATTTTCTTAATCCACAAGCCCACACTTACATTACAACTACTCTATAATCTATATTAGAGAACGAAAAAAAGTGTGTACACGAGTATTGCACTTTGTAGCTCATTCACTGGAGAAAAAAAAAACGGAGATGACCAAACAAAAATGAACCCACATGGGGTTAGCTTAGAATAAGAGTTGCTAGTCACTCATGACTCATGAGTCATGAGTTAAGAATGGGGCATGAAAACGAAGTGATGACAAAAAGAGACAGTGGCGCACTGTCATCCCTCCCATCTTTTCTTCCTTCAATGGGGAACAAAGTTATCTTCCTTCTTTAGTAGTGATGATGATGTCAAATCAATTTACATCTAAACCTAATCATCAACATAAATTCAGTAATTAAGCATTGTTCATTCATTATACTTTCTGGGTCTTTTGGAATTTCTGGGTGTTTTTTGAGCTCTTCTGGTATGGCTTTATCTTCATGCTTTGCCTATCATCCCCAGATCTCTTCCAAGGTACCCACTCTTTTTTTCTCTTCAATTCTTTTTTCCAATAACAATTTGTCCAAATTTTGTGAGTATCAAATTGTTTCTGGTTTATATTGAGCTCAAAATTTTGATTTGATTGCCTTTATATTATAAACGTGTGCATAGTTCTGCTGGATTTCATCTGGGTATTGTTCAAATTAATTGATTTTAGTATATCTTTGTCGTTGTTTTCTTCATTCATGTGTATTTGTCTGCTGGTTAAAAAAAACAGAACAAACACCCATAAGTCTGTAATTTACCAGCTTATACGAATCTGGAAATGTTAAAAAATGCATGTTTTGATGTTCTGCAATCTGCAGTCAATCAAGTTCATCATGATGACACTGGTTAATGGATTCTGCGCGAATGATTTGATCTTGTCCATTTTTATGAATTAAGGTTGTTTGCTGTAGATTGATTGCAGCGTTCTAGTAGATAAAAACCATCATCAGGTGGGTTTAAGTCCGAGTTTAGTTCTATCTGTTCAAGGTGTGAGAAATGGAATATTTAGCCAGAAAGTGCCTAAGCTCAGAGCGGAGATAATGCACGGTTGTTGTTTCCTTGGAGGTCTTAGAATTGATATTAGACCGACAGTAAACGAATCCAATTTTTCGCGTAGGAATTCTGGAGTATGTTATTCTTGTAAGCCTTCTCGTCTTTAGCCTGAAAATCTTAGGTTTGAAGGTTCTTCCTTTTAAGTTATAACCCATTACATCATACTTTGTACTGCTTATGTTATTTCAGGGTTGTCGAATACTCAAGTTGCTAGCAGTGCATTTACATTAGGAACAGCTGCTGTCCTCCCATTTTACACTCTCATGATCGTTGCTCCGAAAGCTGAACTTGTAATCTTCTCAGAACTTACTCAGCAATAATAATGATACATCAAGTTTGTTGATGTAACAGTCGTCGTTATTTCTTGTATGTATGAATGAATGTAAACTGGATTACTGCAGACTAAAAAGACTATGAAAAGTAGCATACCATATGTTGTGCTTGGGCTTCTGTACGCATATCTTTTGTACCTTTCTTGGACGCCTGAAACCATACGCTTGATGTTTGCGAGTAAATACTGGTTACCTGAGGTTAGTTTGTTTAGCATCAACTGACATATTCAATTATGAAATATGAAACTAATTTCATATTCAGTAATCTGCATTTTTATGGATGATATGCAGCTTCAAGGTATAGCGAAAATGTTTTCCAGTGAGATGACTTTAGCATCTGCATGGATTCATCTGCTGGTAGTGGACCTCTTTGCTGCTAGGTCACTTCCTACTCAAGTCAAGAATTATGGTATTCTGTTAGAATGAGACACTGAATTCAGAAGAAAAAAAAACTCACAAAATCCTATATATTTTCTGAACAGGAATGTTTATCAAGATGGTCTGGAGAAGGAAGTCGAGACCCGGCATTCAGTCTCAATGTGCTTGCTATTCTGTCCTGTAGGAATTCTAAGTCATCTCATCACCACGGCGCTGACCAGACCTTCTGACAAAACTCGACATAGCGATACTATTATCTAATTTTTCTGAACTAGAGTTTTAATCTGTTTTTTGTGAACTGATGTTTTGGTTGGATGTGCCAAGGAAGTTGCTGTCAAATTTAAATGAAACAATGCATATAGACAATAATTAGCCATAAGAGACACTTAGAGAAAAACATTAGCACTGAATAGTTTTCTTGTCATGAATTGATAGTATCACTAAGCTAAACACAGCTGCAAATTGGTAATACATAAAACAGGAAAAAGATACAAAAATAAAATCACTTTTCCTTTCCTTTTCGTCTTGTAAAAAAATTGAGCTACGATAACGTTTTTCAGTTGAGTATATGTTGATCTACAGTCCGGCTAGGCGGCTATCATTCTTCATATGCTGCAGATTCCTGAAATGCTAAAATGTCTTTTTCCGAACATTGACTGATCAGCATTAGAATTTACCTTGTTTGATTTACATGTCAATATTTGAGGCTTCCAAGCTTTACAAGGCTATTAGATGAACAAACGCTGACATTTCCATGAAATTCACCAGCAGAATTCCAACTTCAAGCTCCCA ATGGTTCCTATTAGCGTCGCAGTTCCGTCAGATAACTGGTATGCAATAATTAAGCATTGTTCATTCATTATACTTTCTGGGTCTTTTGGAATTTCTGGGTGTTTTTTGAGCTCTTCTGGTATGGCTTTATCTTCATGCTTTGCCTATCATCCCCAGATCTCTTCCAAGATTGATTGCAGCGTTCTAGTAGATAAAAACCATCATCAGGTGGGTTTAAGTCCGAGTTTAGTTCTATCTGTTCAAGGTGTGAGAAATGGAATATTTAGCCAGAAAGTGCCTAAGCTCAGAGCGGAGATAATGCACGGTTGTTGTTTCCTTGGAGGTCTTAGAATTGATATTAGACCGACAGTAAACGAATCCAATTTTTCGCGTAGGAATTCTGGAGTATGTTATTCTTGGTTGTCGAATACTCAAGTTGCTAGCAGTGCATTTACATTAGGAACAGCTGCTGTCCTCCCATTTTACACTCTCATGATCGTTGCTCCGAAAGCTGAACTTACTAAAAAGACTATGAAAAGTAGCATACCATATGTTGTGCTTGGGCTTCTGTACGCATATCTTTTGTACCTTTCTTGGACGCCTGAAACCATACGCTTGATGTTTGCGAGTAAATACTGGTTACCTGAGCTTCAAGGTATAGCGAAAATGTTTTCCAGTGAGATGACTTTAGCATCTGCATGGATTCATCTGCTGGTAGTGGACCTCTTTGCTGCTAGGAATGTTTATCAAGATGGTCTGGAGAAGGAAGTCGAGACCCGGCATTCAGTCTCAATGTGCTTGCTATTCTGTCCTGTAGGAATTCTAAGTCATCTCATCACCACGGCGCTGACCAGACCTTCTGACAAAACTCGACATAGCGATACTATTATCTAATTTTTCTGAACTAGAGTTTTAATCTGTTTTTTGTGAACTGATGTTTTGGTTGGATGTGCCAAGGAAGTTGCTGTCAAATTTAAATGAAACAATGCATATAGACAATAATTAGCCATAAGAGACACTTAGAGAAAAACATTAGCACTGAATAGTTTTCTTGTCATGAATTGATAGTATCACTAAGCTAAACACAGCTGCAAATTGGTAATACATAAAACAGGAAAAAGATACAAAAATAAAATCACTTTTCCTTTCCTTTTCGTCTTGTAAAAAAATTGAGCTACGATAACGTTTTTCAGTTGAGTATATGTTGATCTACAGTCCGGCTAGGCGGCTATCATTCTTCATATGCTGCAGATTCCTGAAATGCTAAAATGTCTTTTTCCGAACATTGACTGATCAGCATTAGAATTTACCTTGTTTGATTTACATGTCAATATTTGAGGCTTCCAAGCTTTACAAGGCTATTAGATGAACAAACGCTGACATTTCCATGAAATTCACCAGCAGAATTCCAACTTCAAGCTCCCA ATGGTTCCTATTAGCGTCGCAGTTCCGTCAGATAACTGGTATGCAATAATTAAGCATTGTTCATTCATTATACTTTCTGGGTCTTTTGGAATTTCTGGGTGTTTTTTGAGCTCTTCTGGTATGGCTTTATCTTCATGCTTTGCCTATCATCCCCAGATCTCTTCCAAGATTGATTGCAGCGTTCTAGTAGATAAAAACCATCATCAGGTGGGTTTAAGTCCGAGTTTAGTTCTATCTGTTCAAGGTGTGAGAAATGGAATATTTAGCCAGAAAGTGCCTAAGCTCAGAGCGGAGATAATGCACGGTTGTTGTTTCCTTGGAGGTCTTAGAATTGATATTAGACCGACAGTAAACGAATCCAATTTTTCGCGTAGGAATTCTGGAGTATGTTATTCTTGGTTGTCGAATACTCAAGTTGCTAGCAGTGCATTTACATTAGGAACAGCTGCTGTCCTCCCATTTTACACTCTCATGATCGTTGCTCCGAAAGCTGAACTTACTAAAAAGACTATGAAAAGTAGCATACCATATGTTGTGCTTGGGCTTCTGTACGCATATCTTTTGTACCTTTCTTGGACGCCTGAAACCATACGCTTGATGTTTGCGAGTAAATACTGGTTACCTGAGCTTCAAGGTATAGCGAAAATGTTTTCCAGTGAGATGACTTTAGCATCTGCATGGATTCATCTGCTGGTAGTGGACCTCTTTGCTGCTAGGAATGTTTATCAAGATGGTCTGGAGAAGGAAGTCGAGACCCGGCATTCAGTCTCAATGTGCTTGCTATTCTGTCCTGTAGGAATTCTAAGTCATCTCATCACCACGGCGCTGACCAGACCTTCTGACAAAACTCGACATAGCGATACTATTATCTAA MVPISVAVPSDNWYAIIKHCSFIILSGSFGISGCFLSSSGMALSSCFAYHPQISSKIDCSVLVDKNHHQVGLSPSLVLSVQGVRNGIFSQKVPKLRAEIMHGCCFLGGLRIDIRPTVNESNFSRRNSGVCYSWLSNTQVASSAFTLGTAAVLPFYTLMIVAPKAELTKKTMKSSIPYVVLGLLYAYLLYLSWTPETIRLMFASKYWLPELQGIAKMFSSEMTLASAWIHLLVVDLFAARNVYQDGLEKEVETRHSVSMCLLFCPVGILSHLITTALTRPSDKTRHSDTII Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00169.1 vs. NCBI nr
Match: gi|902240087|gb|KNA25870.1| (hypothetical protein SOVF_001770 [Spinacia oleracea]) HSP 1 Score: 499.2 bits (1284), Expect = 4.800e-138 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1
BLAST of Spo00169.1 vs. NCBI nr
Match: gi|731315836|ref|XP_010693143.1| (PREDICTED: uncharacterized protein LOC104906122 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 327.8 bits (839), Expect = 1.900e-86 Identity = 171/242 (70.66%), Postives = 190/242 (78.51%), Query Frame = 1
BLAST of Spo00169.1 vs. NCBI nr
Match: gi|743875937|ref|XP_011035064.1| (PREDICTED: uncharacterized protein LOC105132995 isoform X1 [Populus euphratica]) HSP 1 Score: 311.2 bits (796), Expect = 1.900e-81 Identity = 157/245 (64.08%), Postives = 191/245 (77.96%), Query Frame = 1
BLAST of Spo00169.1 vs. NCBI nr
Match: gi|566165809|ref|XP_002305164.2| (hypothetical protein POPTR_0004s09860g [Populus trichocarpa]) HSP 1 Score: 311.2 bits (796), Expect = 1.900e-81 Identity = 158/245 (64.49%), Postives = 191/245 (77.96%), Query Frame = 1
BLAST of Spo00169.1 vs. NCBI nr
Match: gi|743820792|ref|XP_011021245.1| (PREDICTED: uncharacterized protein LOC105123373 [Populus euphratica]) HSP 1 Score: 297.7 bits (761), Expect = 2.100e-77 Identity = 153/245 (62.45%), Postives = 190/245 (77.55%), Query Frame = 1
BLAST of Spo00169.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S293_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_001770 PE=4 SV=1) HSP 1 Score: 499.2 bits (1284), Expect = 3.400e-138 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1
BLAST of Spo00169.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FS66_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g026900 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.300e-86 Identity = 171/242 (70.66%), Postives = 190/242 (78.51%), Query Frame = 1
BLAST of Spo00169.1 vs. UniProtKB/TrEMBL
Match: B9H2Z9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09860g PE=4 SV=2) HSP 1 Score: 311.2 bits (796), Expect = 1.300e-81 Identity = 158/245 (64.49%), Postives = 191/245 (77.96%), Query Frame = 1
BLAST of Spo00169.1 vs. UniProtKB/TrEMBL
Match: D7TT26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g02880 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 7.400e-77 Identity = 152/246 (61.79%), Postives = 185/246 (75.20%), Query Frame = 1
BLAST of Spo00169.1 vs. UniProtKB/TrEMBL
Match: B9S5F3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1570640 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 2.000e-74 Identity = 151/244 (61.89%), Postives = 184/244 (75.41%), Query Frame = 1
BLAST of Spo00169.1 vs. ExPASy Swiss-Prot
Match: ABA4_ARATH (Protein ABA DEFICIENT 4, chloroplastic OS=Arabidopsis thaliana GN=ABA4 PE=2 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 7.100e-65 Identity = 120/176 (68.18%), Postives = 147/176 (83.52%), Query Frame = 1
BLAST of Spo00169.1 vs. ExPASy Swiss-Prot
Match: MHZ4_ORYSJ (Protein MAO HUZI 4, chloroplastic OS=Oryza sativa subsp. japonica GN=MHZ4 PE=2 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 4.200e-57 Identity = 102/145 (70.34%), Postives = 127/145 (87.59%), Query Frame = 1
BLAST of Spo00169.1 vs. TAIR (Arabidopsis)
Match: AT1G67080.1 (abscisic acid (aba)-deficient 4) HSP 1 Score: 248.8 bits (634), Expect = 4.000e-66 Identity = 120/176 (68.18%), Postives = 147/176 (83.52%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00169.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00169.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00169.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo00169.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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