Spo00172 (gene)

Overview
NameSpo00172
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionAt1g67050-like protein
Locationchr1 : 30761197 .. 30761970 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTGATCTTTTCACAGAAAACCCTTCTAGTAGAGGAATGAGTCCCAGGATTTCATTCTCCCATGACCTTAAAAACTCAGAAATTGTTCCGATTGAACCTCATATCCCGTTAAAATCATCGCTTCTCGATTACGACTTCGATTTCTGCGTAACTCGAAGGAGCGGTGATCAAGAACCTACATTAGCCGATGAATTATTTGCAAATGGGATAATTCTCCCAATCCAAATCAAGAAAAAGATCATACCCACAATCCTAAAATCAAAATCCTTTTCCCCATCTTCATCTTCGTCGTCTTCGTCCCCGTATTCGTCTTTCTTGCCGCCATTGCGGCCGTCCTCTGTTCTCAGCAGCGGCGAAAGCGAGAAAGAAACAGAGGAGAAACAAGGGAACACCACCACCACCACCACCACCACCAACAACAACAAATCAACGTTTTGGACGTTCAAGAGAAGCAAGAGTTTGAATTGTGGGAGCATTTATAAAAGAGGATTATGTCCATTGCCTCTTTTATCGAGGAGTAAATCGACTGGTTCAACAACAAGTGCTAAAAGGTCATTGATTTCAAAGGACGAAAAACAGAGTTCTAATTTGAAGAATTCAAATTCGAATTCAAACCATCAAAAACCTCCATTGAAGAAGAATTATGGTGGTTCATCTTTTAATTCTGGTTTAATTCAAGTTAGCCCTGTTCTTAATGTTCCAACTGGCAAGGTTTTCGGATTTGGTTCTATTTTCTCCACCGGCAAAGATAAGACCAAGAAGAAATAA

mRNA sequence

ATGGCTGTTGATCTTTTCACAGAAAACCCTTCTAGTAGAGGAATGAGTCCCAGGATTTCATTCTCCCATGACCTTAAAAACTCAGAAATTGTTCCGATTGAACCTCATATCCCGTTAAAATCATCGCTTCTCGATTACGACTTCGATTTCTGCGTAACTCGAAGGAGCGGTGATCAAGAACCTACATTAGCCGATGAATTATTTGCAAATGGGATAATTCTCCCAATCCAAATCAAGAAAAAGATCATACCCACAATCCTAAAATCAAAATCCTTTTCCCCATCTTCATCTTCGTCGTCTTCGTCCCCGTATTCGTCTTTCTTGCCGCCATTGCGGCCGTCCTCTGTTCTCAGCAGCGGCGAAAGCGAGAAAGAAACAGAGGAGAAACAAGGGAACACCACCACCACCACCACCACCACCAACAACAACAAATCAACGTTTTGGACGTTCAAGAGAAGCAAGAGTTTGAATTGTGGGAGCATTTATAAAAGAGGATTATGTCCATTGCCTCTTTTATCGAGGAGTAAATCGACTGGTTCAACAACAAGTGCTAAAAGGTCATTGATTTCAAAGGACGAAAAACAGAGTTCTAATTTGAAGAATTCAAATTCGAATTCAAACCATCAAAAACCTCCATTGAAGAAGAATTATGGTGGTTCATCTTTTAATTCTGGTTTAATTCAAGTTAGCCCTGTTCTTAATGTTCCAACTGGCAAGGTTTTCGGATTTGGTTCTATTTTCTCCACCGGCAAAGATAAGACCAAGAAGAAATAA

Coding sequence (CDS)

ATGGCTGTTGATCTTTTCACAGAAAACCCTTCTAGTAGAGGAATGAGTCCCAGGATTTCATTCTCCCATGACCTTAAAAACTCAGAAATTGTTCCGATTGAACCTCATATCCCGTTAAAATCATCGCTTCTCGATTACGACTTCGATTTCTGCGTAACTCGAAGGAGCGGTGATCAAGAACCTACATTAGCCGATGAATTATTTGCAAATGGGATAATTCTCCCAATCCAAATCAAGAAAAAGATCATACCCACAATCCTAAAATCAAAATCCTTTTCCCCATCTTCATCTTCGTCGTCTTCGTCCCCGTATTCGTCTTTCTTGCCGCCATTGCGGCCGTCCTCTGTTCTCAGCAGCGGCGAAAGCGAGAAAGAAACAGAGGAGAAACAAGGGAACACCACCACCACCACCACCACCACCAACAACAACAAATCAACGTTTTGGACGTTCAAGAGAAGCAAGAGTTTGAATTGTGGGAGCATTTATAAAAGAGGATTATGTCCATTGCCTCTTTTATCGAGGAGTAAATCGACTGGTTCAACAACAAGTGCTAAAAGGTCATTGATTTCAAAGGACGAAAAACAGAGTTCTAATTTGAAGAATTCAAATTCGAATTCAAACCATCAAAAACCTCCATTGAAGAAGAATTATGGTGGTTCATCTTTTAATTCTGGTTTAATTCAAGTTAGCCCTGTTCTTAATGTTCCAACTGGCAAGGTTTTCGGATTTGGTTCTATTTTCTCCACCGGCAAAGATAAGACCAAGAAGAAATAA

Protein sequence

MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQEPTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSSGESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTGSTTSAKRSLISKDEKQSSNLKNSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLNVPTGKVFGFGSIFSTGKDKTKKK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00172.1Spo00172.1mRNA


Homology
[Close]
BLAST of Spo00172.1 vs. NCBI nr
Match: gi|902240080|gb|KNA25863.1| (hypothetical protein SOVF_001700 [Spinacia oleracea])

HSP 1 Score: 474.6 bits (1220), Expect = 1.100e-130
Identity = 254/257 (98.83%), Postives = 254/257 (98.83%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE 60
           MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE
Sbjct: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE 60

Query: 61  PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSSG 120
           PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSSG
Sbjct: 61  PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSSG 120

Query: 121 ESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTGS 180
           ESEKETEEKQGN  TTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRS STGS
Sbjct: 121 ESEKETEEKQGN--TTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSNSTGS 180

Query: 181 TTSAKRSLISKDEKQSSNLKNSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLNVPTGKV 240
           TTSAKRSLISKDEKQSSNLKNSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLNVPTGKV
Sbjct: 181 TTSAKRSLISKDEKQSSNLKNSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLNVPTGKV 240

Query: 241 FGFGSIFSTGKDKTKKK 258
           FGFGSIFSTGKDKTKKK
Sbjct: 241 FGFGSIFSTGKDKTKKK 255
[Close]
BLAST of Spo00172.1 vs. NCBI nr
Match: gi|731315854|ref|XP_010693218.1| (PREDICTED: uncharacterized protein LOC104906193 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 357.8 bits (917), Expect = 1.500e-95
Identity = 198/260 (76.15%), Postives = 219/260 (84.23%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE 60
           MAV+LFTENPSSRG+SPRISFSHDLKNSEI PIEPHIPLKSSLLDY+FDFCVTRRS DQE
Sbjct: 1   MAVELFTENPSSRGISPRISFSHDLKNSEITPIEPHIPLKSSLLDYEFDFCVTRRSSDQE 60

Query: 61  PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPL-RPSSVLSS 120
            +LADELFANG+ILPIQIKK+ IP + KS+S+SPSSS       SSFLPPL  PSSVL++
Sbjct: 61  ASLADELFANGVILPIQIKKRNIPIMSKSQSYSPSSS-------SSFLPPLPPPSSVLNN 120

Query: 121 GESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTG 180
             + +ETEEKQG          NN  +FWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTG
Sbjct: 121 --NNQETEEKQG----------NNSKSFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTG 180

Query: 181 STTSAKRSLISKDEKQS--SNLKNSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLNVPT 240
           ST SAKRSLISKDE     +  +NS  NSNHQKPPLKKNYGGSSFNSG++QV+P+LNVPT
Sbjct: 181 STISAKRSLISKDENHQNVNGKQNSLKNSNHQKPPLKKNYGGSSFNSGIMQVNPILNVPT 240

Query: 241 GKVFGFGSIFSTGKDKTKKK 258
           GKVFGFGSIFSTGKDK +KK
Sbjct: 241 GKVFGFGSIFSTGKDKNRKK 241
[Close]
BLAST of Spo00172.1 vs. NCBI nr
Match: gi|661894329|emb|CDP02770.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 192.6 bits (488), Expect = 8.600e-46
Identity = 137/270 (50.74%), Postives = 177/270 (65.56%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE 60
           MAV++ +E  SS G SPRISFSHDL  +E VPIE +I   SS    DFDFCV R S DQE
Sbjct: 1   MAVEICSET-SSMGASPRISFSHDLSQTEGVPIEQYIRTTSSS-SIDFDFCVFRESFDQE 60

Query: 61  PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSS----- 120
            + ADELF++G ILPI+IK+K+ P+   SKS + SSS ++ +P S+  P  +PSS     
Sbjct: 61  SSSADELFSDGKILPIEIKRKLGPS-SPSKSSTSSSSEATPTPISAQTP--QPSSDDHDI 120

Query: 121 --VLSSGESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLS 180
              + S +S+K + EK+   + +    N    +FW FKRS SLNCGS Y R LCPLPLL+
Sbjct: 121 VDPIKSPKSDKTSSEKRRGVSESDEKPNG--KSFWRFKRSSSLNCGSGYARSLCPLPLLN 180

Query: 181 RSKSTGSTTSAKRSLISKDEKQS---SNLKNSN---SNSNHQKPPLKKNYGGSSFNSGLI 240
           RS STGST + KRS   KD   S   ++LK S    S   +QKPPLKK+YG  S+ +G +
Sbjct: 181 RSNSTGSTPNVKRSSSGKDSNLSNKQNSLKQSQSALSAGGYQKPPLKKSYG--SYGNG-V 240

Query: 241 QVSPVLNVPTGKVFGFGSIFSTGKDKTKKK 258
           +V+P LNVP+  +FG GSIFS GKDK+KKK
Sbjct: 241 KVTPFLNVPSPSMFGLGSIFSPGKDKSKKK 260
[Close]
BLAST of Spo00172.1 vs. NCBI nr
Match: gi|1000942757|ref|XP_015582171.1| (PREDICTED: uncharacterized protein LOC8269350 [Ricinus communis])

HSP 1 Score: 188.7 bits (478), Expect = 1.200e-44
Identity = 127/270 (47.04%), Postives = 167/270 (61.85%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLK-SSLLDYDFDFCVTRRSGDQ 60
           MA++L ++N +S G SPRISFSHD   S+IVP+E H  L+ +SL   DFDFC TR+S DQ
Sbjct: 1   MAIELCSDNNNSTGFSPRISFSHDFCLSDIVPVEQHHSLRPNSLGSIDFDFC-TRKSFDQ 60

Query: 61  EPTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSS 120
           E + ADELF++G ILP +IKKK  P   ++ +  P S++                 +L  
Sbjct: 61  ESSPADELFSDGKILPTEIKKKTTPATKQTNNSLPPSNA-----------------LLDD 120

Query: 121 GESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTG 180
               ++ +E +G T       +N+KS FW FKRS SLNC S Y R LCPLPLLSRS STG
Sbjct: 121 SSKAEKIKEMKGGTDEAEEKQSNSKS-FWRFKRSSSLNCVSGYGRSLCPLPLLSRSNSTG 180

Query: 181 S--TTSAKRSLISKDEKQ----------SSNLKNSNSNSNHQKPPLKKNYGGSSFNSGLI 240
           S  +TS KR  +SKD KQ          SS+  +S+S  ++QKPPLKKNY  +      +
Sbjct: 181 SAPSTSVKRVPLSKDNKQQRQAFIKSQSSSSSSSSSSGMSYQKPPLKKNYYANG-----V 240

Query: 241 QVSPVLNVPTGKVFGFGSIFSTGKDKTKKK 258
           +V+PVLNVP+G +FG GSIF  GKDK +KK
Sbjct: 241 RVNPVLNVPSGNLFGLGSIFFNGKDKNRKK 246
[Close]
BLAST of Spo00172.1 vs. NCBI nr
Match: gi|802634426|ref|XP_012077991.1| (PREDICTED: uncharacterized protein LOC105638742 [Jatropha curcas])

HSP 1 Score: 186.0 bits (471), Expect = 8.000e-44
Identity = 139/272 (51.10%), Postives = 174/272 (63.97%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKS--SLLDYDFDFCVTRRSGD 60
           MAV+L ++N +S G+SPRISFSHDL  S+IVP+E H PL+S  SL   DFDFCV R+S D
Sbjct: 1   MAVELCSDN-NSTGISPRISFSHDLCLSDIVPVERH-PLRSNSSLGSIDFDFCV-RKSFD 60

Query: 61  QEPTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLS 120
           QE + ADELF+NG IL  +IKKK     L S    P    +SS+  ++    L+    + 
Sbjct: 61  QESSSADELFSNGKILATEIKKKTKQNNLPSHHPHPEGEETSSNDNNN---SLKKEKKVG 120

Query: 121 SGESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKST 180
           S E E E   KQ N+++     NNN  +FW FKRS SLNC S Y R LCPLPLLSRS ST
Sbjct: 121 SEEGE-ENIIKQSNSSS-----NNNSKSFWRFKRSSSLNCVSGYGRSLCPLPLLSRSNST 180

Query: 181 GST--TSAKRSLISKD-------EKQSSNLKNSNSNSNHQKPPLKKNYG----GSSFNSG 240
           GST  T  KR  +SKD        KQ+  LK  +S+++HQKPPLKKNYG    GS   + 
Sbjct: 181 GSTAPTGVKRVPLSKDNSSNHKHNKQALFLKPQSSSTSHQKPPLKKNYGSYGNGSVRVNP 240

Query: 241 LIQVSPVLNVPTGKVFGFGSIFSTGKDKTKKK 258
           ++ V+PVLNVP+G +FG GSIF  GK+K  KK
Sbjct: 241 VLNVNPVLNVPSGNLFGLGSIF--GKEKNHKK 258
[Close]
BLAST of Spo00172.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2D0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_001700 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 7.900e-131
Identity = 254/257 (98.83%), Postives = 254/257 (98.83%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE 60
           MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE
Sbjct: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE 60

Query: 61  PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSSG 120
           PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSSG
Sbjct: 61  PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSSG 120

Query: 121 ESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTGS 180
           ESEKETEEKQGN  TTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRS STGS
Sbjct: 121 ESEKETEEKQGN--TTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSNSTGS 180

Query: 181 TTSAKRSLISKDEKQSSNLKNSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLNVPTGKV 240
           TTSAKRSLISKDEKQSSNLKNSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLNVPTGKV
Sbjct: 181 TTSAKRSLISKDEKQSSNLKNSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLNVPTGKV 240

Query: 241 FGFGSIFSTGKDKTKKK 258
           FGFGSIFSTGKDKTKKK
Sbjct: 241 FGFGSIFSTGKDKTKKK 255
[Close]
BLAST of Spo00172.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D2Q1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g026980 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.100e-95
Identity = 198/260 (76.15%), Postives = 219/260 (84.23%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE 60
           MAV+LFTENPSSRG+SPRISFSHDLKNSEI PIEPHIPLKSSLLDY+FDFCVTRRS DQE
Sbjct: 1   MAVELFTENPSSRGISPRISFSHDLKNSEITPIEPHIPLKSSLLDYEFDFCVTRRSSDQE 60

Query: 61  PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPL-RPSSVLSS 120
            +LADELFANG+ILPIQIKK+ IP + KS+S+SPSSS       SSFLPPL  PSSVL++
Sbjct: 61  ASLADELFANGVILPIQIKKRNIPIMSKSQSYSPSSS-------SSFLPPLPPPSSVLNN 120

Query: 121 GESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTG 180
             + +ETEEKQG          NN  +FWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTG
Sbjct: 121 --NNQETEEKQG----------NNSKSFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTG 180

Query: 181 STTSAKRSLISKDEKQS--SNLKNSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLNVPT 240
           ST SAKRSLISKDE     +  +NS  NSNHQKPPLKKNYGGSSFNSG++QV+P+LNVPT
Sbjct: 181 STISAKRSLISKDENHQNVNGKQNSLKNSNHQKPPLKKNYGGSSFNSGIMQVNPILNVPT 240

Query: 241 GKVFGFGSIFSTGKDKTKKK 258
           GKVFGFGSIFSTGKDK +KK
Sbjct: 241 GKVFGFGSIFSTGKDKNRKK 241
[Close]
BLAST of Spo00172.1 vs. UniProtKB/TrEMBL
Match: A0A068U2K3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040264001 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.000e-46
Identity = 137/270 (50.74%), Postives = 177/270 (65.56%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE 60
           MAV++ +E  SS G SPRISFSHDL  +E VPIE +I   SS    DFDFCV R S DQE
Sbjct: 1   MAVEICSET-SSMGASPRISFSHDLSQTEGVPIEQYIRTTSSS-SIDFDFCVFRESFDQE 60

Query: 61  PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSS----- 120
            + ADELF++G ILPI+IK+K+ P+   SKS + SSS ++ +P S+  P  +PSS     
Sbjct: 61  SSSADELFSDGKILPIEIKRKLGPS-SPSKSSTSSSSEATPTPISAQTP--QPSSDDHDI 120

Query: 121 --VLSSGESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLS 180
              + S +S+K + EK+   + +    N    +FW FKRS SLNCGS Y R LCPLPLL+
Sbjct: 121 VDPIKSPKSDKTSSEKRRGVSESDEKPNG--KSFWRFKRSSSLNCGSGYARSLCPLPLLN 180

Query: 181 RSKSTGSTTSAKRSLISKDEKQS---SNLKNSN---SNSNHQKPPLKKNYGGSSFNSGLI 240
           RS STGST + KRS   KD   S   ++LK S    S   +QKPPLKK+YG  S+ +G +
Sbjct: 181 RSNSTGSTPNVKRSSSGKDSNLSNKQNSLKQSQSALSAGGYQKPPLKKSYG--SYGNG-V 240

Query: 241 QVSPVLNVPTGKVFGFGSIFSTGKDKTKKK 258
           +V+P LNVP+  +FG GSIFS GKDK+KKK
Sbjct: 241 KVTPFLNVPSPSMFGLGSIFSPGKDKSKKK 260
[Close]
BLAST of Spo00172.1 vs. UniProtKB/TrEMBL
Match: A0A067KMC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12995 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.600e-44
Identity = 139/272 (51.10%), Postives = 174/272 (63.97%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKS--SLLDYDFDFCVTRRSGD 60
           MAV+L ++N +S G+SPRISFSHDL  S+IVP+E H PL+S  SL   DFDFCV R+S D
Sbjct: 1   MAVELCSDN-NSTGISPRISFSHDLCLSDIVPVERH-PLRSNSSLGSIDFDFCV-RKSFD 60

Query: 61  QEPTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLS 120
           QE + ADELF+NG IL  +IKKK     L S    P    +SS+  ++    L+    + 
Sbjct: 61  QESSSADELFSNGKILATEIKKKTKQNNLPSHHPHPEGEETSSNDNNN---SLKKEKKVG 120

Query: 121 SGESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKST 180
           S E E E   KQ N+++     NNN  +FW FKRS SLNC S Y R LCPLPLLSRS ST
Sbjct: 121 SEEGE-ENIIKQSNSSS-----NNNSKSFWRFKRSSSLNCVSGYGRSLCPLPLLSRSNST 180

Query: 181 GST--TSAKRSLISKD-------EKQSSNLKNSNSNSNHQKPPLKKNYG----GSSFNSG 240
           GST  T  KR  +SKD        KQ+  LK  +S+++HQKPPLKKNYG    GS   + 
Sbjct: 181 GSTAPTGVKRVPLSKDNSSNHKHNKQALFLKPQSSSTSHQKPPLKKNYGSYGNGSVRVNP 240

Query: 241 LIQVSPVLNVPTGKVFGFGSIFSTGKDKTKKK 258
           ++ V+PVLNVP+G +FG GSIF  GK+K  KK
Sbjct: 241 VLNVNPVLNVPSGNLFGLGSIF--GKEKNHKK 258
[Close]
BLAST of Spo00172.1 vs. UniProtKB/TrEMBL
Match: B9H306_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09790g PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.400e-41
Identity = 124/263 (47.15%), Postives = 164/263 (62.36%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDYDFDFCVTRRSGDQE 60
           MA++L ++  SS G+SPRISFSHDL  S+IVP+E      SSL + DFDFCV R+S D++
Sbjct: 1   MAIELCSD--SSAGVSPRISFSHDLCISDIVPVEKRPLRPSSLGNIDFDFCV-RKSFDRD 60

Query: 61  PTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSSG 120
            + ADELF++G ILP +IKKK       +K   PS            +PP +      S 
Sbjct: 61  SSSADELFSDGKILPTEIKKK----TASAKQVDPS------------MPPGQALQDDVSK 120

Query: 121 ESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTGS 180
           E +K++ +                 +FW FKRS SLNC S Y + LCPLPLLSRS STGS
Sbjct: 121 EYQKQSSK-----------------SFWRFKRSSSLNCASGYGKSLCPLPLLSRSYSTGS 180

Query: 181 TTSAKRSLISKD----EKQSSNLK--NSNSNSNHQKPPLKKNYGGSSFNSGLIQVSPVLN 240
           T S+KR+ ++KD    + + S LK   S+S++N+QKPPLKKNYG   + +G ++VSPVLN
Sbjct: 181 TPSSKRAPLTKDTNHKQHRQSFLKPSQSSSSTNYQKPPLKKNYG--PYGNG-VRVSPVLN 224

Query: 241 VPTGKVFGFGSIFSTGKDKTKKK 258
           V +G +FG GSIF  GKDK KKK
Sbjct: 241 VSSGNLFGLGSIFFNGKDKNKKK 224
[Close]
BLAST of Spo00172.1 vs. TAIR (Arabidopsis)
Match: AT1G67050.1 (unknown protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-39
Identity = 127/286 (44.41%), Postives = 162/286 (56.64%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLL-------DYDFDFCV- 60
           MAVDL +EN +   MSPRISFS D   S+ +PIE   PL+SS           DFDFC+ 
Sbjct: 1   MAVDLLSENSN---MSPRISFSRDFCQSDAIPIEKR-PLRSSNSKPSSLNSSIDFDFCIP 60

Query: 61  ----TRRSGDQEPTLADELFANGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSPYSSFL 120
               +  S DQ    ADELF+NG ILP +IKKK            P        P  S  
Sbjct: 61  GGVNSGESFDQGSWSADELFSNGKILPTEIKKKP----------EPGKKEPEPKPVKS-- 120

Query: 121 PPLRPSSVLSSGESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCP 180
              +P S     + ++  EE+Q +    TT    N  +FW FKRS SLNCGS Y R LCP
Sbjct: 121 ---KPDS---RKQRKQPNEEQQEDDVIITTEEKTNTKSFWGFKRSSSLNCGSTYGRSLCP 180

Query: 181 LPLLSRSKSTGSTTSAKRSLISKDE------KQSSNLKNSN------SNSNHQKPPLKKN 240
           LPLL+RS STGST+S ++   S+        +QSS+L +S+      SN+   KPPLKK+
Sbjct: 181 LPLLNRSNSTGSTSSKQKQSSSRKHNEHVKLQQSSSLSSSSSASSSLSNNGFSKPPLKKS 240

Query: 241 YGGSSFNS---GLIQVSPVLN-VPTGKVFGFGSIFS-TGKDKTKKK 258
           YGG S+ S   G I+VSPV+N VP+G +FGFGS+FS  G+DK KK+
Sbjct: 241 YGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGNGRDKNKKR 264
[Close]
BLAST of Spo00172.1 vs. TAIR (Arabidopsis)
Match: AT1G48780.1 (unknown protein)

HSP 1 Score: 94.7 bits (234), Expect = 8.600e-20
Identity = 97/254 (38.19%), Postives = 130/254 (51.18%), Query Frame = 1 

		  

Query: 18  RISFSHDLKNSEIVP---IEPH--IPLKSSLLDY---DFDFCVTRRSGDQEPTLADELFA 77
           RISFS DL  S+  P   IEP   I    +LLD    DF+F ++      + + ADE+FA
Sbjct: 9   RISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSSNSDFEFHISNSFDPGDSSPADEIFA 68

Query: 78  NGIILPIQIKK-KIIPTILKSKSFSPSSSSSSSSPYSSFLPPLRPSSVLSSGESEKETEE 137
           +G+ILP  +     +P  L      P +SS S SP S           L +  SEKET  
Sbjct: 69  DGMILPFHVTAASTVPKRLYKYELPPITSSLSPSPLSP--------QPLPTKHSEKETNG 128

Query: 138 KQGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTGSTTSAKRSL 197
           +     + +    ++KS FW+FKRS SLNC  I K  +C  P L+RS STGS T++KR++
Sbjct: 129 RASGANSDSEAEKSSKS-FWSFKRSSSLNC-DIKKSLICSFPRLTRSNSTGSVTNSKRAM 188

Query: 198 ISKDEKQSSNLKNSNSNS---NHQKPPLKKNYGGSSFNSGLIQVSPVLNVPTGKVFGFGS 257
           +        + ++S  N+     QK   KK  GG SF+     V PVLN P+   FG GS
Sbjct: 189 LRDVNNHRPSSRSSCCNAYQFRPQKHTGKKGEGGGSFS-----VIPVLNGPS--TFGLGS 245
[Close]
BLAST of Spo00172.1 vs. TAIR (Arabidopsis)
Match: AT1G68330.1 (unknown protein)

HSP 1 Score: 81.3 bits (199), Expect = 9.800e-16
Identity = 105/289 (36.33%), Postives = 141/289 (48.79%), Query Frame = 1 

		  

Query: 1   MAVDLFTENPSSRGMSPRISFSHDLKNSEIVPIEPHIPLKSSLLDY--DFDFCVTRRSGD 60
           MA+D+     S  G+SPRISFS+DL +++    +  + L S+LLD   +FDFC       
Sbjct: 1   MAIDVCCSEASGSGISPRISFSYDLDSTD----DGEVRLDSTLLDSGSEFDFCFGSSCSV 60

Query: 61  QEPTLADELFANGIILPIQIKKK------IIPTILKSKSFSPSSSSSSSSPYSSFLP--P 120
           QE + ADELF+ G ILP+QIKK+      +   + +S S S SSSSSSSS  SS  P   
Sbjct: 61  QEVSPADELFSEGKILPVQIKKEESLPQTVTFRVPRSASLSSSSSSSSSSSSSSRAPEKK 120

Query: 121 LRPSSVLSSGESEKETEEKQGNTTTTTTTTNNNKSTFWTFKRSKSLNCG-SIYKRGLC-P 180
           +R   +L + ES+ E               +  +  F  FKRS SLN   S   +GL   
Sbjct: 121 MRLKELLLNPESDFE---------------DKPRGLFLQFKRSISLNYDKSRNSKGLIRS 180

Query: 181 LPLLSRSKSTGSTTSAKRSLISKD----------EKQSSNLKNSNSNSNHQKP-PLKKNY 240
              LSRS    ST +    L+ K+           K    L+ S+S S+   P   KK  
Sbjct: 181 FHFLSRS---NSTPNPNLDLLPKETHHPHKTHNLPKHKPPLRRSSSLSSSSVPFYSKKPL 240

Query: 241 GGSSFNSGL--IQVSPVLNVP-----TGKVFGFGSIFS--TGKDKTKKK 258
           G +SF +G   ++VSPVLN P     +    GF SI S   GK  TK K
Sbjct: 241 GRNSFGNGNGGVRVSPVLNFPPPAFISNVADGFFSIGSLCNGKTNTKTK 267
[Close]
BLAST of Spo00172.1 vs. TAIR (Arabidopsis)
Match: AT3G18300.1 (unknown protein)

HSP 1 Score: 72.4 bits (176), Expect = 4.600e-13
Identity = 87/271 (32.10%), Postives = 131/271 (48.34%), Query Frame = 1 

		  

Query: 18  RISFSHDLKNSEI-VPIE--PHIPLK--SSLLDY---DFDFCVTRRSGDQEPTLADELFA 77
           R SF+ DL  S+   P+E  P  P++  ++LLD    DF+F ++      + + ADE+FA
Sbjct: 10  RFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSSNSDFEFHISSNFDPGDSSPADEIFA 69

Query: 78  NGIILPIQIKKKIIPTILKSKSFSPSSSSSSSSP-YSSFLPPLR-PSSVLSSGESEKETE 137
           +G+ILP+   +    + +  + +        S+P  SS+LPPL  P    S   S KET 
Sbjct: 70  DGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPTLSSYLPPLPLPLPEHSRKYSVKETR 129

Query: 138 EK---QGNTTTTTTTTNNNKSTFWTFKRSKSLNCGSIYKRGLCPLPLLSRSKSTGSTTSA 197
                +G+   + +    +  +FW+FKRS SLNC  I K  +C  P L+RS STGS   +
Sbjct: 130 GSLNGRGSGANSDSEAEKSSKSFWSFKRSSSLNC-DIKKSLICSFPRLTRSNSTGSVAIS 189

Query: 198 KRSLISKDEKQSSNL----KNSNSNSNHQKPPLK---------------KNYGGSSFNSG 257
           KR ++    K SS      +   + S+H +PP                 KN GG     G
Sbjct: 190 KREMLRDINKHSSQRHGVPRPGVNPSSHMRPPSSFCCSSYQFRPQKHAGKNGGG---RGG 249
The following BLAST results are available for this feature:
BLAST of Spo00172.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902240080|gb|KNA25863.1|1.1e-13098.8hypothetical protein SOVF_0017... [more]
gi|731315854|ref|XP_010693218.1|1.5e-9576.1PREDICTED: uncharacterized pro... [more]
gi|661894329|emb|CDP02770.1|8.6e-4650.7unnamed protein product [Coffe... [more]
gi|1000942757|ref|XP_015582171.1|1.2e-4447.0PREDICTED: uncharacterized pro... [more]
gi|802634426|ref|XP_012077991.1|8.0e-4451.1PREDICTED: uncharacterized pro... [more]
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BLAST of Spo00172.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S2D0_SPIOL7.9e-13198.8Uncharacterized protein OS=Spi... [more]
A0A0J8D2Q1_BETVU1.1e-9576.1Uncharacterized protein OS=Bet... [more]
A0A068U2K3_COFCA6.0e-4650.7Uncharacterized protein OS=Cof... [more]
A0A067KMC4_JATCU5.6e-4451.1Uncharacterized protein OS=Jat... [more]
B9H306_POPTR4.4e-4147.1Uncharacterized protein OS=Pop... [more]
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BLAST of Spo00172.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00172.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G67050.11.7e-3944.4unknown protein[more]
AT1G48780.18.6e-2038.1unknown protein[more]
AT1G68330.19.8e-1636.3unknown protein[more]
AT3G18300.14.6e-1332.1unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31722FAMILY NOT NAMEDcoord: 1..257
score: 2.0
NoneNo IPR availablePANTHERPTHR31722:SF10F1O19.11 PROTEINcoord: 1..257
score: 2.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007623 circadian rhythm
biological_process GO:0009909 regulation of flower development
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo189280.80Barchart | Table
Spo111930.80Barchart | Table
Spo260130.80Barchart | Table
Spo257870.80Barchart | Table
Spo018070.80Barchart | Table
Spo165870.78Barchart | Table
Spo271620.77Barchart | Table
Spo080340.76Barchart | Table
Spo120250.76Barchart | Table
Spo127120.76Barchart | Table
Spo024810.75Barchart | Table
Spo260860.75Barchart | Table
Spo024540.75Barchart | Table
Spo224600.75Barchart | Table
Spo096360.75Barchart | Table
Spo177130.74Barchart | Table
Spo183830.74Barchart | Table
Spo058420.74Barchart | Table
Spo129340.74Barchart | Table
Spo176310.74Barchart | Table
Spo238430.74Barchart | Table
Spo231720.74Barchart | Table
Spo205950.74Barchart | Table
Spo133830.73Barchart | Table
Spo247900.73Barchart | Table
Spo247690.73Barchart | Table
Spo001240.73Barchart | Table
Spo035460.73Barchart | Table
Spo207290.73Barchart | Table
Spo041290.73Barchart | Table
Spo140320.73Barchart | Table
Spo077860.73Barchart | Table
Spo122180.73Barchart | Table
Spo084420.73Barchart | Table
Spo216760.72Barchart | Table
Spo108610.72Barchart | Table
Spo101710.72Barchart | Table
Spo197880.72Barchart | Table
Spo068850.72Barchart | Table
Spo074840.72Barchart | Table
Spo025480.72Barchart | Table
Spo251290.72Barchart | Table
Spo002830.72Barchart | Table
Spo173380.72Barchart | Table
Spo109100.72Barchart | Table
Spo109060.72Barchart | Table
Spo216560.71Barchart | Table
Spo158660.71Barchart | Table
Spo123410.71Barchart | Table
Spo134820.71Barchart | Table
Spo106530.71Barchart | Table
Spo202920.71Barchart | Table
Spo041300.71Barchart | Table
Spo281890.70Barchart | Table
Spo011980.70Barchart | Table
Spo032810.70Barchart | Table
Spo039030.70Barchart | Table
Spo050460.70Barchart | Table
Spo058160.70Barchart | Table
Spo077780.70Barchart | Table
Spo097610.70Barchart | Table
Spo107370.70Barchart | Table
Spo169920.70Barchart | Table
Spo217440.70Barchart | Table
Spo243050.70Barchart | Table
Spo245160.70Barchart | Table
Spo046630.69Barchart | Table
Spo022520.69Barchart | Table
Spo247600.69Barchart | Table
Spo249760.69Barchart | Table
Spo016910.69Barchart | Table
Spo107520.69Barchart | Table
Spo099180.69Barchart | Table
Spo083250.69Barchart | Table
Spo123580.68Barchart | Table
Spo222680.68Barchart | Table
Spo223640.68Barchart | Table
Spo104850.68Barchart | Table
Spo232480.68Barchart | Table
Spo010730.68Barchart | Table
Spo020910.68Barchart | Table
Spo268110.68Barchart | Table
Spo057090.68Barchart | Table
Spo055290.68Barchart | Table
Spo134070.68Barchart | Table
Spo076260.68Barchart | Table
Spo259600.68Barchart | Table
Spo198680.68Barchart | Table
Spo041270.68Barchart | Table
Spo208900.68Barchart | Table
Spo141680.68Barchart | Table
Spo024060.67Barchart | Table
Spo091500.67Barchart | Table
Spo067840.67Barchart | Table
Spo188340.67Barchart | Table
Spo079910.67Barchart | Table
Spo024050.67Barchart | Table
Spo193280.67Barchart | Table
Spo238420.67Barchart | Table
Spo065430.67Barchart | Table
Spo197510.67Barchart | Table
Spo016160.67Barchart | Table
Spo061410.67Barchart | Table
Spo174970.67Barchart | Table
Spo141300.67Barchart | Table
Spo003610.67Barchart | Table
Spo128490.67Barchart | Table
Spo182350.67Barchart | Table
Spo251450.66Barchart | Table
Spo082050.66Barchart | Table
Spo146820.66Barchart | Table
Spo165840.66Barchart | Table
Spo181200.66Barchart | Table
Spo052330.66Barchart | Table
Spo184180.66Barchart | Table
Spo185650.66Barchart | Table
Spo049870.66Barchart | Table
Spo197730.66Barchart | Table
Spo212230.66Barchart | Table
Spo025790.66Barchart | Table
Spo025130.66Barchart | Table
Spo024820.66Barchart | Table
Spo228760.66Barchart | Table
Spo229810.66Barchart | Table
Spo238360.66Barchart | Table
Spo246690.66Barchart | Table
Spo253070.66Barchart | Table
Spo112030.66Barchart | Table
Spo035750.65Barchart | Table
Spo090600.65Barchart | Table
Spo205620.65Barchart | Table
Spo049410.65Barchart | Table
Spo168040.65Barchart | Table
Spo007500.65Barchart | Table
Spo161900.65Barchart | Table
Spo120650.65Barchart | Table
Spo003400.65Barchart | Table
Spo272240.65Barchart | Table