Spo00211 (gene)

Overview
NameSpo00211
Typegene
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein l9
Locationchr1 : 30979284 .. 30982097 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAATTAATAAAGAAAACTTTGCTCTTTAGAGCAATATGTTAGGGACGGGAAAGTAAATAAATTAAAAAAAAGAAAGAAAAGACACACACACAAATCATACTCCCCCCGTTCTTGTTCTTCATCAAACCCTACCTCCCCTGAAACCGTAGGAGAGAGAATCCACCATCAACAATGAAGCTCGTACGTTCCTCCGACTCCATGGAAATCCCGGAAGGGATCGACATAAAGGTCGACGCCAAGATCATCGTCGTTTCAGGTCCAAGGGGTACTCTCTCCCGCAACTTCAAGCATCTCAACCTCGATTTCGAGCTTGTTACTGATGAAGAAGGGAAGAAGAAGTTGAACATTGATTCTTGGTTTGGAACCAGGAAGACCTCCGCTTCCATCCGTACTGCTATCTCTCACATTGAGAATCTTATTACTGGTGTTACCAAGGGTTACCGCTACAAAATGAGGATGGTGTACGCTCATTTTCCCATCAATGCTAGTATTACTAACTCTAACAAGAGCATTGAGATCCGTAACTTTCTTGGCGAGAAGAGGGTAATTTTCTCTATCTATCTCTCACACTCTTAATTTATGAGTAAATTATTGATTGCCATCTAATTGTTTCAGTTGTATTTCATCTTTATCTTATTGATTCAATCTTTGTAAATGCTCGTTTTCCTCTGAATATATGTTTTGTTCAATGATAGTTATGGATTTCTGGGAGGAATGCTAAATCTCAAGTGGCTTTTTTCCGTACAACTATTTTTTGTACCAACACATAATATTTCACTACCAAAAACGCAAATGATTAGTATATCAATGCCATATCAGTCTCAGTACCAATACCAAATTAATCTCAGTACGGCAGTACCAATACCAAATTAATGGTTACTAATACGAGCCACTTGAGGCATAGAGTTCCTCGATTTCTGATGTGTTTAATTGATTCTGCCAAACAAAAGGACTGGACTTTTGGGGATTTTCCAAGAGTTATTTAATATAAGAATTTAACCCCAAATTTGTTTGTATCATTGAAATTATGATGTTTGTGTGGTGCGTTTGGTTTTGTATAGGTTTTTTCTTAATTTGGTTTTGGGAGTAATCTGCTGTTAGTTTGTTTTGATAATCGGAAGAGAAAGTAAATCTTAAAAAAGAATGTTTTTGCTGCTTAAATTTAAATTGGCAGTGACTTTCATTTGCAATGTTTATTAGTGTTGTGATTTTTGATCTAGTTCTGGTTACCTGTAAAATGGTAGTGGATTATCTACTGATATATTTTGCTACGAACTTGTAGTATTTTGGTTGACAAATAGACCAATAGCAGGGTTGTGGTTTTGGTGATTGTGTTGATCTCATATTTTAATGCTACTGTGGTCATAGATTATTTGACACTAGTTTGGTGGTTGCTAAATTTGGCCCAGTGCACATGATTGTATTGATCTGTGCCTCTTTTTCCAAGCTGCATTTCCATTGAGTTACTATAGTAGTGATTGATGTTCTTAATTATGTGAAAGTTGGTATATGAGTTACTCCCGTATAATGTAGTGTTGCTTTGATCTTGTTGTAACATTCGTTGGCCTGCAACGTTTCGTCTGCCAATGAGGCATGAGTTTCATAGTGTGCTTACTCTTTTCATTGATGATTATACTTGTGCCTCTTGTTAAGACATCCCACTTGTGCTAATTGGTTCAGTGACTTACTTGGGAAACTTATTTTTATTTTTTTTTATTTTTTTATAGCGTATCTGAAAAGTATGCTATGCGGGTGGTTTGCTGGAACCTGTGAAAATCAGATTCAGCAGTCTTAGGTTCTATTTCAAAAAAATTGACTGTTGGAGTTTTTATACAGGAGGGATGGTGATTAAAAATGTCTGGTTTTATGATGGTTTCTGTTTTGTTATTTATGTTCCATAGTCCTGGTATTTTTGTTAGGGATTCACCTTTGTCCAGTTCTAGTTGCCTAAGCTTTTATTTTTCTTCTTATATTTACTTTCCCTTTGTGATGCCCTCTTGAACCCCATTGCTATATTTTCTCAGTAATATACTTGGTGTATTCTTTTGATGGTTGTGGTGATTTTATTTTTCTGTTATTTATAAGTTGTTTGATTTGTGGAGTATTGATCTGTGGTGCTGATTATTTATCCTTTCCAGGTAAGGAAGGTTGATATGTTGGAGGGAGTTTCAATATTGAGATCCGAGAAGGTCAAGGATGAGCTCGTCTTAGACGGAAGTGATATCGAGCTTGTTTCTCGATCTGCTGCCCTAATTAACCAGGTACTTTTTGGGATTTCATTGATCACTCTACTCGTGGTGCTGTTTGTTTTACAAGATATCTAATTTTTTGTTTTTCTCTTGTGCAGAAATGCCATGTCAAGAATAAGGATATCAGGAAGTTTCTTGACGGTATCTATGTCAGTGAGAAGGGAAGGATCGTTGAAGAGGAGTAACCTATATGATGAGGCATTAGAACAGGATTTGATAGATTTTATGTTTCCATGTTACAATTTTGAGTTGGGTATATATTGCCTTCATTAGTTGCCATTTATATTTTTCATATAATAATATTTTTTTTTTTTTTTTTTGAGGGATATAATAATATTTAATTGGAAAATTGGTCAGAAAAGACCTTTTAAAACCAAAAAATTGTCAAAAATGAACTTTTAAAAAAAAAGTGGTGAAAGAAGGCCCAATTGGAATTTTTTGTTGTCAATAAGGACCAAGAGTGATTTTCCGATGGTCAACTCTCGGATTCCGGCGTTGACCAACACGTGTCACACACATGGATTAAAAAAAAAAAATTAAAATTTTCCCTCCAATTTACCCC

mRNA sequence

CAAAAATTAATAAAGAAAACTTTGCTCTTTAGAGCAATATGTTAGGGACGGGAAAGTAAATAAATTAAAAAAAAGAAAGAAAAGACACACACACAAATCATACTCCCCCCGTTCTTGTTCTTCATCAAACCCTACCTCCCCTGAAACCGTAGGAGAGAGAATCCACCATCAACAATGAAGCTCGTACGTTCCTCCGACTCCATGGAAATCCCGGAAGGGATCGACATAAAGGTCGACGCCAAGATCATCGTCGTTTCAGGTCCAAGGGGTACTCTCTCCCGCAACTTCAAGCATCTCAACCTCGATTTCGAGCTTGTTACTGATGAAGAAGGGAAGAAGAAGTTGAACATTGATTCTTGGTTTGGAACCAGGAAGACCTCCGCTTCCATCCGTACTGCTATCTCTCACATTGAGAATCTTATTACTGGTGTTACCAAGGGTTACCGCTACAAAATGAGGATGGTGTACGCTCATTTTCCCATCAATGCTAGTATTACTAACTCTAACAAGAGCATTGAGATCCGTAACTTTCTTGGCGAGAAGAGGGTAAGGAAGGTTGATATGTTGGAGGGAGTTTCAATATTGAGATCCGAGAAGGTCAAGGATGAGCTCGTCTTAGACGGAAGTGATATCGAGCTTGTTTCTCGATCTGCTGCCCTAATTAACCAGAAATGCCATGTCAAGAATAAGGATATCAGGAAGTTTCTTGACGGTATCTATGTCAGTGAGAAGGGAAGGATCGTTGAAGAGGAGTAACCTATATGATGAGGCATTAGAACAGGATTTGATAGATTTTATGTTTCCATGTTACAATTTTGAGTTGGGTATATATTGCCTTCATTAGTTGCCATTTATATTTTTCATATAATAATATTTTTTTTTTTTTTTTTTGAGGGATATAATAATATTTAATTGGAAAATTGGTCAGAAAAGACCTTTTAAAACCAAAAAATTGTCAAAAATGAACTTTTAAAAAAAAAGTGGTGAAAGAAGGCCCAATTGGAATTTTTTGTTGTCAATAAGGACCAAGAGTGATTTTCCGATGGTCAACTCTCGGATTCCGGCGTTGACCAACACGTGTCACACACATGGATTAAAAAAAAAAAATTAAAATTTTCCCTCCAATTTACCCC

Coding sequence (CDS)

ATGAAGCTCGTACGTTCCTCCGACTCCATGGAAATCCCGGAAGGGATCGACATAAAGGTCGACGCCAAGATCATCGTCGTTTCAGGTCCAAGGGGTACTCTCTCCCGCAACTTCAAGCATCTCAACCTCGATTTCGAGCTTGTTACTGATGAAGAAGGGAAGAAGAAGTTGAACATTGATTCTTGGTTTGGAACCAGGAAGACCTCCGCTTCCATCCGTACTGCTATCTCTCACATTGAGAATCTTATTACTGGTGTTACCAAGGGTTACCGCTACAAAATGAGGATGGTGTACGCTCATTTTCCCATCAATGCTAGTATTACTAACTCTAACAAGAGCATTGAGATCCGTAACTTTCTTGGCGAGAAGAGGGTAAGGAAGGTTGATATGTTGGAGGGAGTTTCAATATTGAGATCCGAGAAGGTCAAGGATGAGCTCGTCTTAGACGGAAGTGATATCGAGCTTGTTTCTCGATCTGCTGCCCTAATTAACCAGAAATGCCATGTCAAGAATAAGGATATCAGGAAGTTTCTTGACGGTATCTATGTCAGTGAGAAGGGAAGGATCGTTGAAGAGGAGTAA

Protein sequence

MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNIDSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFLGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIVEEE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00211.1Spo00211.1mRNA


Homology
[Close]
BLAST of Spo00211.1 vs. NCBI nr
Match: gi|902211000|gb|KNA16589.1| (hypothetical protein SOVF_087850 [Spinacia oleracea])

HSP 1 Score: 372.5 bits (955), Expect = 4.500e-100
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MKLVRSSDSM+IPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID
Sbjct: 1   MKLVRSSDSMDIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNK IEIRNFL
Sbjct: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKGIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEKRVRKVDMLEGV+ILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKRVRKVDMLEGVTILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKGRIVEEE
Sbjct: 181 IYVSEKGRIVEEE 193
[Close]
BLAST of Spo00211.1 vs. NCBI nr
Match: gi|731321334|ref|XP_010671296.1| (PREDICTED: 60S ribosomal protein L9-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 347.4 bits (890), Expect = 1.600e-92
Identity = 175/193 (90.67%), Postives = 186/193 (96.37%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK V SSD MEIPEGI++KVDAKIIVVSGPRGTL+RNFKHLNLDF++ T+E+GKK L ID
Sbjct: 1   MKQVLSSDFMEIPEGIELKVDAKIIVVSGPRGTLTRNFKHLNLDFQITTNEDGKKILKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           SWFGTRKTSA+IRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITN+NKSIEIRNFL
Sbjct: 61  SWFGTRKTSAAIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNTNKSIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEKRVRKVDML+GVSILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKRVRKVDMLDGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKGRI EEE
Sbjct: 181 IYVSEKGRIAEEE 193
[Close]
BLAST of Spo00211.1 vs. NCBI nr
Match: gi|743887138|ref|XP_011038051.1| (PREDICTED: 60S ribosomal protein L9 [Populus euphratica])

HSP 1 Score: 330.9 bits (847), Expect = 1.500e-87
Identity = 161/193 (83.42%), Postives = 181/193 (93.78%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFGTRKTSA+IRTA+SH+ENLITGVT+GYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFGTRKTSAAIRTALSHVENLITGVTRGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDMLEGVSILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLEGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193
[Close]
BLAST of Spo00211.1 vs. NCBI nr
Match: gi|743887136|ref|XP_011038050.1| (PREDICTED: 60S ribosomal protein L9-like [Populus euphratica])

HSP 1 Score: 330.5 bits (846), Expect = 2.000e-87
Identity = 160/193 (82.90%), Postives = 181/193 (93.78%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFGTRKTSA+IRTA+SH+ENLITGVT+GYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFGTRKTSAAIRTALSHVENLITGVTRGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDMLEGVSILRSEKVKDEL+LDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLEGVSILRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193
[Close]
BLAST of Spo00211.1 vs. NCBI nr
Match: gi|743887132|ref|XP_011038049.1| (PREDICTED: 60S ribosomal protein L9-like [Populus euphratica])

HSP 1 Score: 329.7 bits (844), Expect = 3.400e-87
Identity = 160/193 (82.90%), Postives = 181/193 (93.78%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFGTRKTSA+IRTA+SH+ENLITGVT+GYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFGTRKTSAAIRTALSHVENLITGVTRGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDMLEGVSI+RSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLEGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193
[Close]
BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC61_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087850 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.200e-100
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MKLVRSSDSM+IPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID
Sbjct: 1   MKLVRSSDSMDIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNK IEIRNFL
Sbjct: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKGIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEKRVRKVDMLEGV+ILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKRVRKVDMLEGVTILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKGRIVEEE
Sbjct: 181 IYVSEKGRIVEEE 193
[Close]
BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FKL0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050740 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.100e-92
Identity = 175/193 (90.67%), Postives = 186/193 (96.37%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK V SSD MEIPEGI++KVDAKIIVVSGPRGTL+RNFKHLNLDF++ T+E+GKK L ID
Sbjct: 1   MKQVLSSDFMEIPEGIELKVDAKIIVVSGPRGTLTRNFKHLNLDFQITTNEDGKKILKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           SWFGTRKTSA+IRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITN+NKSIEIRNFL
Sbjct: 61  SWFGTRKTSAAIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNTNKSIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEKRVRKVDML+GVSILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKRVRKVDMLDGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKGRI EEE
Sbjct: 181 IYVSEKGRIAEEE 193
[Close]
BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: E5GBD5_CUCME (60S ribosomal protein l9 OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.000e-87
Identity = 163/194 (84.02%), Postives = 183/194 (94.33%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEE-GKKKLNI 60
           MK + SS++M+IP+G+ IKV+AKII V GPRG L RNFKHLNLDF+L+TDE+ GKKKL I
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           D+WFG+RKTSA+IRTA+SH+ENLITGVTKGYRYKMR VYAHFPINASITNSNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKVDML+GVSI+RSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEKG +VEEE
Sbjct: 181 GIYVSEKGTVVEEE 194
[Close]
BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: A9P941_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s45810g PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 5.200e-87
Identity = 160/193 (82.90%), Postives = 180/193 (93.26%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WF TRKTSA+IRTA+SH+ENLITGVTKGYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFATRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDML+GVSILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLDGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193
[Close]
BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: B9GJJ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s45820g PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 6.900e-87
Identity = 159/193 (82.38%), Postives = 180/193 (93.26%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WF TRKTSA+IRTA+SH+ENLITGVTKGYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFATRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDML+GVSILRSEKVKDEL+LDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLDGVSILRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193
[Close]
BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 7.000e-85
Identity = 153/193 (79.27%), Postives = 176/193 (91.19%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M IP+G+ IKV+AK+I V GPRG L R+FKHLNLDF+L+TDE GKKKL ID
Sbjct: 1   MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDENGKKKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFG+RKTSA+IRTA+SH+ENLITGVTKG+RYKMR VYA FPINASITN NKSIEIRNFL
Sbjct: 61  AWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVD+L+GVSI+RSEKVKDE+VLDG+DIELVSRS ALINQKCHVK KDIRKFLDG
Sbjct: 121 GEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +V EE
Sbjct: 181 IYVSEKGAVVVEE 193
[Close]
BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3)

HSP 1 Score: 308.1 bits (788), Expect = 6.600e-83
Identity = 150/192 (78.12%), Postives = 175/192 (91.15%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + +S++MEIPEG+ ++V AK++ V GPRG L+RNFKHLNLDF+L+   EG +KL +D
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL---EGGRKLQVD 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFGTR+T A+IRTAISH++NLITGVTKGYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDMLEGV+ILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEE 193
           IYVS+KG I E+
Sbjct: 181 IYVSDKGTITED 189
[Close]
BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=1 SV=3)

HSP 1 Score: 301.6 bits (771), Expect = 6.200e-81
Identity = 149/194 (76.80%), Postives = 173/194 (89.18%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEE-GKKKLNI 60
           MK + SS++M+IP+ + IKV AK+I V GPRG L R+FKHLNLDF+L+ D E GKKKL I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFGTRKTSASIRTA+SH++NLI+GVT+G+RYKMR VYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV+I+RSEKVKDE+VLDG+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEK +IVEEE
Sbjct: 181 GIYVSEKSKIVEEE 194
[Close]
BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.900e-79
Identity = 142/194 (73.20%), Postives = 174/194 (89.69%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDE-EGKKKLNI 60
           MK + SS++M+IP+G+ IKV+AK+I V GPRG L+R+FKHLNLDF+L+ D+  GK++L I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFG+RKTSASIRTA+SH++NLI GVT+G+ Y+MR VYAHFPINASI  +NKSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV I+RSEKVKDE++L+G+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEKG+I  EE
Sbjct: 181 GIYVSEKGKIAVEE 194
[Close]
BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.200e-55
Identity = 105/193 (54.40%), Postives = 142/193 (73.58%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + S+ +++IPE +DI +  + ++V GPRGTL R+F H+N++  L+  +  KK+L +D
Sbjct: 1   MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK--KKRLRVD 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
            W+G RK  A++RT  SH++N+I GVT G+RYKMR VYAHFPIN  I  +   +EIRNFL
Sbjct: 61  KWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK +R+V M  GV+   S+  KDEL+L+G+DIELVS SAALI Q   VKNKDIRKFLDG
Sbjct: 121 GEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG + + +
Sbjct: 181 IYVSEKGTVQQAD 191
[Close]
BLAST of Spo00211.1 vs. TAIR (Arabidopsis)
Match: AT1G33120.1 (Ribosomal protein L6 family)

HSP 1 Score: 301.6 bits (771), Expect = 3.500e-82
Identity = 149/194 (76.80%), Postives = 173/194 (89.18%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEE-GKKKLNI 60
           MK + SS++M+IP+ + IKV AK+I V GPRG L R+FKHLNLDF+L+ D E GKKKL I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFGTRKTSASIRTA+SH++NLI+GVT+G+RYKMR VYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV+I+RSEKVKDE+VLDG+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEK +IVEEE
Sbjct: 181 GIYVSEKSKIVEEE 194
[Close]
BLAST of Spo00211.1 vs. TAIR (Arabidopsis)
Match: AT1G33140.1 (Ribosomal protein L6 family)

HSP 1 Score: 301.6 bits (771), Expect = 3.500e-82
Identity = 149/194 (76.80%), Postives = 173/194 (89.18%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEE-GKKKLNI 60
           MK + SS++M+IP+ + IKV AK+I V GPRG L R+FKHLNLDF+L+ D E GKKKL I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFGTRKTSASIRTA+SH++NLI+GVT+G+RYKMR VYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV+I+RSEKVKDE+VLDG+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEK +IVEEE
Sbjct: 181 GIYVSEKSKIVEEE 194
[Close]
BLAST of Spo00211.1 vs. TAIR (Arabidopsis)
Match: AT4G10450.1 (Ribosomal protein L6 family)

HSP 1 Score: 294.3 bits (752), Expect = 5.600e-80
Identity = 142/194 (73.20%), Postives = 174/194 (89.69%), Query Frame = 1 

		  

Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDE-EGKKKLNI 60
           MK + SS++M+IP+G+ IKV+AK+I V GPRG L+R+FKHLNLDF+L+ D+  GK++L I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFG+RKTSASIRTA+SH++NLI GVT+G+ Y+MR VYAHFPINASI  +NKSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV I+RSEKVKDE++L+G+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEKG+I  EE
Sbjct: 181 GIYVSEKGKIAVEE 194
The following BLAST results are available for this feature:
BLAST of Spo00211.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902211000|gb|KNA16589.1|4.5e-10098.4hypothetical protein SOVF_0878... [more]
gi|731321334|ref|XP_010671296.1|1.6e-9290.6PREDICTED: 60S ribosomal prote... [more]
gi|743887138|ref|XP_011038051.1|1.5e-8783.4PREDICTED: 60S ribosomal prote... [more]
gi|743887136|ref|XP_011038050.1|2.0e-8782.9PREDICTED: 60S ribosomal prote... [more]
gi|743887132|ref|XP_011038049.1|3.4e-8782.9PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RC61_SPIOL3.2e-10098.4Uncharacterized protein OS=Spi... [more]
A0A0J8FKL0_BETVU1.1e-9290.6Uncharacterized protein OS=Bet... [more]
E5GBD5_CUCME4.0e-8784.060S ribosomal protein l9 OS=Cu... [more]
A9P941_POPTR5.2e-8782.9Uncharacterized protein OS=Pop... [more]
B9GJJ8_POPTR6.9e-8782.3Uncharacterized protein OS=Pop... [more]
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BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL9_PEA7.0e-8579.260S ribosomal protein L9 OS=Pi... [more]
RL9_ORYSJ6.6e-8378.160S ribosomal protein L9 OS=Or... [more]
RL91_ARATH6.2e-8176.860S ribosomal protein L9-1 OS=... [more]
RL92_ARATH9.9e-7973.260S ribosomal protein L9-2 OS=... [more]
RL9_BOVIN1.2e-5554.460S ribosomal protein L9 OS=Bo... [more]
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BLAST of Spo00211.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G33120.13.5e-8276.8Ribosomal protein L6 family[more]
AT1G33140.13.5e-8276.8Ribosomal protein L6 family[more]
AT4G10450.15.6e-8073.2Ribosomal protein L6 family[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000702Ribosomal protein L6PIRPIRSF002162RPL6p_RPL6a_RPL9e_RPL9ocoord: 1..189
score: 1.3
IPR000702Ribosomal protein L6PANTHERPTHR1165560S/50S RIBOSOMAL PROTEIN L6/L9coord: 1..193
score: 4.3E
IPR002359Ribosomal protein L6, conserved site-2PROSITEPS00700RIBOSOMAL_L6_2coord: 165..186
scor
IPR020040Ribosomal protein L6, alpha-beta domainGENE3D3.90.930.12coord: 8..89
score: 5.2E-25coord: 90..191
score: 2.2
IPR020040Ribosomal protein L6, alpha-beta domainPFAMPF00347Ribosomal_L6coord: 101..180
score: 7.8E-11coord: 12..89
score: 1.3
IPR020040Ribosomal protein L6, alpha-beta domainunknownSSF56053Ribosomal protein L6coord: 6..89
score: 1.73E-18coord: 90..186
score: 1.76
NoneNo IPR availablePANTHERPTHR11655:SF18SUBFAMILY NOT NAMEDcoord: 1..193
score: 4.3E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
RNA-Seq Expression