Spo00226 (gene)

Overview
NameSpo00226
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionFidipidine, putative isoform 1
LocationSpoScf_01115 : 10875 .. 15470 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGTTTGTTTGTTTATTTGATCTCATTACATTTATCTGCTCTTTCTTTTTACTAATATCTTAACCTTCTGAAGTCTGAAATAATATTTGGCCATTTGTTCAAGTATAGGATAGGCTTCGTCAAACTCGTAAATATTATGACACCTATAATGCTCTTTTTGAGATAAAGGACTTGATGCTGAAGGAGATATCTCTACTAAATTCAGTCGATTCACAAGTAAGTACTTGTATTAGATAGATGTCTTCACATATTTCAGTATGATTTCCCCCTACTTTAGCAACTTGTTTGTACAACATGAATTACTAAGTGTATATTGTGATGATTATCTGGAATGAAAAACATTGTTAATTTTTCCAGTGTTTTCGTGTTAGTTAAGACCTCACCAAGTTATGGCAAAGAATAAAAAAGAGGGGAGAGGAGTAGTGATGTGATTGAAGAACCATACTTGTTTGGTTGGTATTTGAGGAAGGGGGCGAATATTGCCGATGATGGTTAAGAAACTAAACAATGACCCCTTTTCAAAAAACCTGAAAATAAAATGTCTTCTCTAGTCTATAGTCCTAGGCTCCTAGGAAACCCTCTTAAGGAAAGAGAGTTCATTTCTCTAGTCAACTTTTCCATATCCAACCCCATTCCTTTCTTGTGAAAATCTTTTGGCAAAAATTTCTTTTACCAAGGGTTGGGGGTGTGAAGGGTATTCTCGAAGGAGGGGTGCTAATTTCCTTTGATTTTGTTCTTGATCGGTCCCTTTTTTAGGAATGTACTTAGCAAGTTACCAAATATCAGAGATATGCATATTATAATGGTTTATTGCTGAGGTTAGTTGACCAATAGAGGGGCGAGAAACGAGATGAGGGGAGGGGAGTTAGTTTTATATACTAAGTAATTGATTTTTGAAAAACTAGAACCTCATGTGGTGGATAAAATAAATACACAAACTCTTGCTTAAGGCTGGTGTACAACACATATTGTAAAGGGATGTAAAGTTAACTCAAAATTCACAAAAGTTACTCCGATATAATGTAAAAGTTATCTATTTTTGTAGTCATAATCTCTTGAATAAAAATTATCCCTTCAAAATCACTAATAATTTGTAAAAGGTAATTATGTACTCCCTCCGTCCCTAATACTCGCTCCGGTTTGACCGCCACAGAGTTTTAGGCAATTTCATTGACTTATTAATTTATTAGGTGGTAGTTGATAATGGGGTATTTTTTAATATAGTTAGTGGAAAATGTGCCAAATAAAGGGGTAGGGGTGGGGTGGGATGGGGTGAATTTTGTAATGTTTTTTTTAAGAAGTAAGAATATATGTGGGCCCAGGGTTAAGTGAGAGAAATAATATAATATTAGTAAAAGTATGACATTTATACAAACGGGGCGAGCAGTATGGAACTACTTTATAAGGAAGGTGGGGCTTGTATTAAGGGACGGAGGGAGTAACTCTTTAAAATGTTATCCTTCAAAAATTATTTCATAACATAAAAAGTTAATCAAAACATGTTACTCCCTCCGTCCCAGATTAGTTGTTACACTTTTCTTTTTCGTCTGTCCTAGATTAGTTGTTACACTTCTAAATTAGGAATGACCCCACAATTATTATATTGTCTCTCTCTTCTCTCTAAAACTTTTTTGGTCCCCACACCCTCTCTCATTCAATTAAAAAAAATACCCCACTAACTCCTATAACATCTACTTTTTCAATAAAATAACAATTGATAACCAAACTACCACTTATCACCTAAAACTTTGTGCAAAGGTAAGTGTAACAACTAATTTGGGACGGAGGGAGTAAAAGTTACCAAAAACTGGGTAAAAGTTACCCTGAAGTACAATAAATTTATTGTACACAAGGTGCGTGCAAGACCTTTTGAAATAAATAACCTTTGTCTCTAAATCCATGTTGATATTTTATGCAGGCCCGACTTTGAGGCAGTCCAATCGGATCTACATGGCCACATAATTTTGGGGCCCACAAGAAATTTGTTGGTTAAAGTCCAAAACCATAAAAAGGGAAAATATATCTTCTATTCTCTTACCCTATTTTACAGTTAAACTCCCCCACTAAAACCAAATTAAAAATGTGGTTTGCAAAAGATTAAAACGTGTGACCTCCCGTTTCAACACTATAGTGTTATCCAATTGAGCTATGATTTTTTACATGTTTTCTTTGCAAAATTAATGCTAATATAATAAAAGAAAAAATATCTTGTGAAAAAAATTCAAACATAACTTCATTAAAGAAAATAATAATGAATTGTTATCCACATAATAATTTGGGGCGTCGACCAGGCCCAAAATCAAGTTTGATTTTCTAAAATAGTTATTCTCTTAATTATCCCCTCCTAGAAATCCTCTAGTCAAATATTTTTTCCGGTAATAATGAATAGATCACCCATTTTCATGTATCAAACCTTTTCATTCATTTTCTCAAACAACCCGCATAAAGTCTAAAACCATTTTATAATTTGGCCCTATTTTTTCTATAAACAAAACAACAACAACAACAACGACAACAACAACAAAGCCTTAGTCCCAAAATGTTTTGGGGTCGGCTAACATAAATCGTCGTAGGAGATCGTCATCGTCACCAATCAAACCAGAAAGGAGCGGGAAGTTAAACAAAACAATGTTAATATAATAATTATGTGTTTTGCATTAAATAATTGTCCGTAAAAATTTATAGGAGCCTAATATTTGTACTTAGCACAGGGACTTCAAGTTGACGGAGATGGCCCTGATTTATGTCTTGTACCATTGTACTCAGATTATATGGTTTTCAATTTAGGTAGACTTTTCCCCCTTTGATATGGCCAAACCTGGATTGGACTTGAACTGGATTTCTTTCCGTATTCCGACTTCCGACTTCAGGGTAGAGTAGCATGATAAAGGGAGAGTTGAAAGAACTCACACATAAAAAGGGAGACTGTTCTAAATTTCCATCATTCCATGTGTTTGTGAAGTAAGGGTTGTCTAAGATTAGAAAAATAGTGAAAGGTGACTATTATATTAGTCTAACAAGCTATTGTAAAATTGTTAAGATTATAAAATTGTTAAGATTATAAAATTGTTAAGATTATAAAATTCTATTATAAAATTGTTAAGATTGAAGTATAATTTGACTTGTATGCTATCCATCTTTTTCAGTGTGGGCCTGGAAGAAATGTAAAGTTCTATTGAAGTGTTTGTCACGAAGCTTAGTTTACAGAGTTTTACATATGGCATCATTTTGGCGTGATCTGATTAGGAGGGGTCGAGGGGGTGTCACTGGGTGGGAGGTTGTATTTTTTAAATGACAAAGTGCGGTTTTCTCCTTTCCCCCCCTTGATTCCTTTTTAGGACTCCTCGTCCTCCGATTGCAATCCCTTTTTCGAGTAGAAGTTCTTTTCCATTTATGGGGAAACATGAAAATATTCGTTGGTGTTTGATGACATATGCATTCATGGGAAGTCTGGCTATATCTTTGAGAAAATGCTTCCATTTCTTATTTTAATGAAGCTTTTAATTTCCGTAAGACAGCCTAGTATTATTATTTAACATAATCCATGGCTGTGATAATACTCCCTCCGTCCCAGATTAGTTATTACACTTTCCTTTTTCGTCCGTCCCAGATTAGTCGTTACACTTCTAAATTAGGAATGACCCCACAGTTATTATATCGTCTCTCTTCCCACTAATTTTTTTTGTCCCCACACCCTATCTCTTTCAACTAAAAAAATACCCCACTAACTCCTATCGCATCTACTTTTTCAATAAAATACTAATTGATAACCACACTACTACTTATCGCATTAAACTGTAAGCCCAGGAGAGTGTAACGACTATTCTGGGACGGAGGGAGTAATATGATAGATGCCGGATGGCTGTCTTCATGTGTGCTTGGGACATTGAGCTTAGATAAGTATTATCTTTTGTGCTTCTTTGATTAAATGGTTAGCTCCAGCAGATGTACTGAATTTTTGTATACTTGCACAATTCGTATTATAGTTTGGAGATGCGATTGGGAACCCTGCTGGTCGTACAAAATTCATTGAATCAATGGATGCTATTCTGAAGGGAATTCGGCAGGTAACTTGAGTTCTTTCACTGGTGTTTTATACATGTTGACCAAAAATTTTAGCAGTAATACTACCTCAATTTTACTGGTATTACTCGTCACAGAAATGTTTGGCCTACTGAAAGTGTGGTAATGACTATAAAGTCATGGACGTTGATATATATATTTCTTATCACAGCTTAGTTTCTCGCCAGATGCTGCTAAATTCTATCCGTTCCTGATTGAGCCAAGCTTAGTTAAGCTTACAATTCCTAACAAGCTGACGCCAATTTTTTCTAACATATGTTCAACATGTCTTGGTTCATCTTTAGAAGTTTGAGAAGGTGCTACTTGGATTGCAACTGGAGCAAAAAACTCTTGATGTCCTCAGGGAGCGGTACAGTGCAGCCACTATGAATCAACGTCAGTGTGTCATCCTCTTGAAGGATTTTCAGGCAAGAATCCTTATTCTAAACGTGGTGATTTTAATAATTGGTGTAAGCAAGATCCAAAAAATAGCTGTCATTGTGCCAATTAGTCTGTCAAATTCTTACTAA

mRNA sequence

ATGCAGGATAGGCTTCGTCAAACTCGTAAATATTATGACACCTATAATGCTCTTTTTGAGATAAAGGACTTGATGCTGAAGGAGATATCTCTACTAAATTCAGTCGATTCACAATTTGGAGATGCGATTGGGAACCCTGCTGGTCGTACAAAATTCATTGAATCAATGGATGCTATTCTGAAGGGAATTCGGCAGAAGTTTGAGAAGGTGCTACTTGGATTGCAACTGGAGCAAAAAACTCTTGATGTCCTCAGGGAGCGGTACAGTGCAGCCACTATGAATCAACGTCAGTGTGTCATCCTCTTGAAGGATTTTCAGGCAAGAATCCTTATTCTAAACGTGGTGATTTTAATAATTGGTGTAAGCAAGATCCAAAAAATAGCTGTCATTGTGCCAATTAGTCTGTCAAATTCTTACTAA

Coding sequence (CDS)

ATGCAGGATAGGCTTCGTCAAACTCGTAAATATTATGACACCTATAATGCTCTTTTTGAGATAAAGGACTTGATGCTGAAGGAGATATCTCTACTAAATTCAGTCGATTCACAATTTGGAGATGCGATTGGGAACCCTGCTGGTCGTACAAAATTCATTGAATCAATGGATGCTATTCTGAAGGGAATTCGGCAGAAGTTTGAGAAGGTGCTACTTGGATTGCAACTGGAGCAAAAAACTCTTGATGTCCTCAGGGAGCGGTACAGTGCAGCCACTATGAATCAACGTCAGTGTGTCATCCTCTTGAAGGATTTTCAGGCAAGAATCCTTATTCTAAACGTGGTGATTTTAATAATTGGTGTAAGCAAGATCCAAAAAATAGCTGTCATTGTGCCAATTAGTCTGTCAAATTCTTACTAA

Protein sequence

MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAILKGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQARILILNVVILIIGVSKIQKIAVIVPISLSNSY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00226.1Spo00226.1mRNA


Homology
[Close]
BLAST of Spo00226.1 vs. NCBI nr
Match: gi|902182550|gb|KNA09945.1| (hypothetical protein SOVF_148890 [Spinacia oleracea])

HSP 1 Score: 206.5 bits (524), Expect = 3.100e-50
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL
Sbjct: 125 MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 184

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ
Sbjct: 185 KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 230
[Close]
BLAST of Spo00226.1 vs. NCBI nr
Match: gi|731320314|ref|XP_010670740.1| (PREDICTED: coiled-coil domain-containing protein 93 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 163.7 bits (413), Expect = 2.300e-37
Identity = 80/106 (75.47%), Postives = 95/106 (89.62%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           +QDRLRQTR +Y+TYNAL EIKDLMLKEISLLNSVD QFGDAIGNPAGRTK I+SM+AI+
Sbjct: 252 IQDRLRQTRGHYETYNALLEIKDLMLKEISLLNSVDLQFGDAIGNPAGRTKLIDSMEAIV 311

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KG++QK EKV LG+Q+++KTLD LRE+YS A +NQR C +LLKDFQ
Sbjct: 312 KGVQQKLEKVQLGVQVDKKTLDTLREQYSTAILNQRHCSVLLKDFQ 357
[Close]
BLAST of Spo00226.1 vs. NCBI nr
Match: gi|225430184|ref|XP_002284934.1| (PREDICTED: coiled-coil domain-containing protein 93 [Vitis vinifera])

HSP 1 Score: 131.3 bits (329), Expect = 1.300e-27
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           +Q++L+QTRK+Y TYNAL EIK+LMLKE SLLNS++SQF DAI + AGR K I SM+ I+
Sbjct: 184 IQEKLQQTRKFYATYNALVEIKELMLKETSLLNSINSQFQDAITSTAGRLKLINSMEGIV 243

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KG +QK EKV LGLQ EQK  D L+ER+SAA   QR+C  LLK FQ
Sbjct: 244 KGAQQKLEKVQLGLQAEQKVCDALKERHSAAIAEQRRCYSLLKAFQ 289
[Close]
BLAST of Spo00226.1 vs. NCBI nr
Match: gi|923739155|ref|XP_013670681.1| (PREDICTED: coiled-coil domain-containing protein 93-like isoform X1 [Brassica napus])

HSP 1 Score: 130.6 bits (327), Expect = 2.200e-27
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           +Q++L+QTRK Y TYNAL EIKDLMLKEISLLNS+ SQF D IG PAGR K I+SM+ ++
Sbjct: 169 IQEKLQQTRKLYGTYNALLEIKDLMLKEISLLNSIGSQFQDVIGTPAGRVKSIDSMEGVM 228

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KGI+QK  KV LGLQ EQ+  D  +E+Y+AA   QR+C  +L+ FQ
Sbjct: 229 KGIQQKLGKVQLGLQEEQRRCDASKEKYTAAAAEQRKCYTVLRAFQ 274
[Close]
BLAST of Spo00226.1 vs. NCBI nr
Match: gi|674964399|emb|CDX68861.1| (BnaC01g05920D [Brassica napus])

HSP 1 Score: 130.6 bits (327), Expect = 2.200e-27
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           +Q++L+QTRK Y TYNAL EIKDLMLKEISLLNS+ SQF D IG PAGR K I+SM+ ++
Sbjct: 169 IQEKLQQTRKLYGTYNALLEIKDLMLKEISLLNSIGSQFQDVIGTPAGRVKSIDSMEGVM 228

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KGI+QK  KV LGLQ EQ+  D  +E+Y+AA   QR+C  +L+ FQ
Sbjct: 229 KGIQQKLGKVQLGLQEEQRRCDASKEKYTAAAAEQRKCYTVLRAFQ 274
[Close]
BLAST of Spo00226.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRS3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148890 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.200e-50
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL
Sbjct: 125 MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 184

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ
Sbjct: 185 KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 230
[Close]
BLAST of Spo00226.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSX1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043490 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.600e-37
Identity = 80/106 (75.47%), Postives = 95/106 (89.62%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           +QDRLRQTR +Y+TYNAL EIKDLMLKEISLLNSVD QFGDAIGNPAGRTK I+SM+AI+
Sbjct: 252 IQDRLRQTRGHYETYNALLEIKDLMLKEISLLNSVDLQFGDAIGNPAGRTKLIDSMEAIV 311

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KG++QK EKV LG+Q+++KTLD LRE+YS A +NQR C +LLKDFQ
Sbjct: 312 KGVQQKLEKVQLGVQVDKKTLDTLREQYSTAILNQRHCSVLLKDFQ 357
[Close]
BLAST of Spo00226.1 vs. UniProtKB/TrEMBL
Match: D7SUP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04930 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.900e-28
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           +Q++L+QTRK+Y TYNAL EIK+LMLKE SLLNS++SQF DAI + AGR K I SM+ I+
Sbjct: 184 IQEKLQQTRKFYATYNALVEIKELMLKETSLLNSINSQFQDAITSTAGRLKLINSMEGIV 243

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KG +QK EKV LGLQ EQK  D L+ER+SAA   QR+C  LLK FQ
Sbjct: 244 KGAQQKLEKVQLGLQAEQKVCDALKERHSAAIAEQRRCYSLLKAFQ 289
[Close]
BLAST of Spo00226.1 vs. UniProtKB/TrEMBL
Match: A0A0D3A2K3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.500e-27
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           +Q++L+QTRK Y TYNAL EIKDLMLKEISLLNS+ SQF D IG PAGR K I+SM+ ++
Sbjct: 169 IQEKLQQTRKLYGTYNALLEIKDLMLKEISLLNSIGSQFQDVIGTPAGRVKSIDSMEGVM 228

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KGI+QK  KV LGLQ EQ+  D  +E+Y+AA   QR+C  +L+ FQ
Sbjct: 229 KGIQQKLGKVQLGLQEEQRRCDASKEKYTAAAAEQRKCYTVLRAFQ 274
[Close]
BLAST of Spo00226.1 vs. UniProtKB/TrEMBL
Match: A0A078BVK8_BRANA (BnaC01g05920D protein OS=Brassica napus GN=BnaC01g05920D PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.500e-27
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           +Q++L+QTRK Y TYNAL EIKDLMLKEISLLNS+ SQF D IG PAGR K I+SM+ ++
Sbjct: 169 IQEKLQQTRKLYGTYNALLEIKDLMLKEISLLNSIGSQFQDVIGTPAGRVKSIDSMEGVM 228

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KGI+QK  KV LGLQ EQ+  D  +E+Y+AA   QR+C  +L+ FQ
Sbjct: 229 KGIQQKLGKVQLGLQEEQRRCDASKEKYTAAAAEQRKCYTVLRAFQ 274
[Close]
BLAST of Spo00226.1 vs. ExPASy Swiss-Prot
Match: CCD93_DICDI (Coiled-coil domain-containing protein 93 homolog OS=Dictyostelium discoideum GN=DDB_G0292680 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.400e-10
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 1 

		  

Query: 4   RLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAILKGI 63
           +L +TR+YY TYN   + K L+  E+S+LNS+ S++  A+ +   +  FI+SMD I+ GI
Sbjct: 520 KLTETRQYYTTYNTFEDKKTLLENELSILNSIQSKYSIAMSSTNNKELFIKSMDQIIDGI 579

Query: 64  RQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           +Q  +K      +E+   D L ++Y      +R    L KDF+
Sbjct: 580 QQVLDKSENKWNVEKVRHDTLSDQYMTLLDQERNYYKLTKDFE 622
[Close]
BLAST of Spo00226.1 vs. ExPASy Swiss-Prot
Match: CCD93_HUMAN (Coiled-coil domain-containing protein 93 OS=Homo sapiens GN=CCDC93 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.300e-8
Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 1 

		  

Query: 6   RQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAILKGIRQ 65
           ++T++++  YN L + K  + KEISLLNS+   F  A+ +PA R +F+  M+ I++GI+Q
Sbjct: 513 KETKQFFTLYNTLDDKKVYLEKEISLLNSIHENFSQAMASPAARDQFLRQMEQIVEGIKQ 572

Query: 66  KFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
              K+    Q  +   D L ++Y      QR     +K+F+
Sbjct: 573 SRMKMEKKKQENKMRRDQLNDQYLELLEKQRLYFKTVKEFK 613
[Close]
BLAST of Spo00226.1 vs. ExPASy Swiss-Prot
Match: CCD93_MOUSE (Coiled-coil domain-containing protein 93 OS=Mus musculus GN=Ccdc93 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.300e-8
Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 1 

		  

Query: 6   RQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAILKGIRQ 65
           ++T++++  YN L + K  + KEISLLNS+   F  A+ +PA R +F+  M+ I++GI+Q
Sbjct: 511 KETKQFFTLYNTLDDKKVYLEKEISLLNSIHENFSQAMASPAARDQFLRQMEQIVEGIKQ 570

Query: 66  KFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
              K+    Q  +   D L ++Y      QR     +K+F+
Sbjct: 571 SRMKMEKKKQENKMRRDQLNDQYLELLEKQRLYFKTVKEFK 611
[Close]
BLAST of Spo00226.1 vs. ExPASy Swiss-Prot
Match: CCD93_RAT (Coiled-coil domain-containing protein 93 OS=Rattus norvegicus GN=Ccdc93 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.300e-8
Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 1 

		  

Query: 6   RQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAILKGIRQ 65
           ++T++++  YN L + K  + KEISLLNS+   F  A+ +PA R +F+  M+ I++GI+Q
Sbjct: 511 KETKQFFTLYNTLDDKKVYLEKEISLLNSIHENFSQAMASPAARDQFLRQMEQIVEGIKQ 570

Query: 66  KFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
              K+    Q  +   D L ++Y      QR     +K+F+
Sbjct: 571 SRMKMEKKKQENKMRRDQLNDQYLELLEKQRLYFKTVKEFK 611
[Close]
BLAST of Spo00226.1 vs. ExPASy Swiss-Prot
Match: CCD93_XENTR (Coiled-coil domain-containing protein 93 OS=Xenopus tropicalis GN=ccdc93 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.600e-8
Identity = 31/101 (30.69%), Postives = 55/101 (54.46%), Query Frame = 1 

		  

Query: 6   RQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAILKGIRQ 65
           ++T++++  YN L + K  + KE++LLNS+   F  A+ +P+ R +F+  M+ I+ GIRQ
Sbjct: 492 KETKQFFTLYNTLDDKKVYLEKEVNLLNSIHDNFQQAMASPSARDQFLRQMEQIVDGIRQ 551

Query: 66  KFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
              K+    Q  +   D L + Y      QR     +K+F+
Sbjct: 552 SRNKMEKKKQENKMKRDQLNDEYLELLEKQRLYFKTVKEFK 592
[Close]
BLAST of Spo00226.1 vs. TAIR (Arabidopsis)
Match: AT4G32560.1 (paramyosin-related)

HSP 1 Score: 125.9 bits (315), Expect = 1.900e-29
Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = 1 

		  

Query: 1   MQDRLRQTRKYYDTYNALFEIKDLMLKEISLLNSVDSQFGDAIGNPAGRTKFIESMDAIL 60
           +Q++L+QTRK Y TYNAL EIKDLMLKE SLLNS+ SQF D IG PAGR K I+SM+ ++
Sbjct: 181 IQEKLQQTRKLYATYNALLEIKDLMLKETSLLNSIGSQFQDVIGTPAGRVKLIDSMEGVM 240

Query: 61  KGIRQKFEKVLLGLQLEQKTLDVLRERYSAATMNQRQCVILLKDFQ 107
           KGI+QK  K+ LGLQ EQ+  D  +E+Y AA   QR+C  +L+ +Q
Sbjct: 241 KGIQQKIGKIQLGLQEEQRLRDASKEKYIAAAAEQRKCYTVLRAYQ 286
The following BLAST results are available for this feature:
BLAST of Spo00226.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902182550|gb|KNA09945.1|3.1e-50100.hypothetical protein SOVF_1488... [more]
gi|731320314|ref|XP_010670740.1|2.3e-3775.4PREDICTED: coiled-coil domain-... [more]
gi|225430184|ref|XP_002284934.1|1.3e-2764.1PREDICTED: coiled-coil domain-... [more]
gi|923739155|ref|XP_013670681.1|2.2e-2761.3PREDICTED: coiled-coil domain-... [more]
gi|674964399|emb|CDX68861.1|2.2e-2761.3BnaC01g05920D [Brassica napus][more]
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BLAST of Spo00226.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QRS3_SPIOL2.2e-50100.Uncharacterized protein OS=Spi... [more]
A0A0J8CSX1_BETVU1.6e-3775.4Uncharacterized protein OS=Bet... [more]
D7SUP2_VITVI8.9e-2864.1Putative uncharacterized prote... [more]
A0A0D3A2K3_BRAOL1.5e-2761.3Uncharacterized protein OS=Bra... [more]
A0A078BVK8_BRANA1.5e-2761.3BnaC01g05920D protein OS=Brass... [more]
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BLAST of Spo00226.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CCD93_DICDI2.4e-1034.9Coiled-coil domain-containing ... [more]
CCD93_HUMAN1.3e-832.6Coiled-coil domain-containing ... [more]
CCD93_MOUSE1.3e-832.6Coiled-coil domain-containing ... [more]
CCD93_RAT1.3e-832.6Coiled-coil domain-containing ... [more]
CCD93_XENTR8.6e-830.6Coiled-coil domain-containing ... [more]
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BLAST of Spo00226.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G32560.11.9e-2958.4paramyosin-related[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR16441FIDIPIDINEcoord: 1..138
score: 9.1

RNA-Seq Expression