Spo00324 (gene)

Overview
NameSpo00324
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionAuxin transport protein BIG
LocationSpoScf_01756 : 56504 .. 61610 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAAGATCTCTTGGACAGCCTTAAGCAGGAAAGCAGGGAGAATAGGCGAAAGTTCATACATGCTTGTATCTGTGGTTTGCAAATTCACGGAGATGAGAAGAAAGGGCAAACATCTTTGGTAAGGAATATCCACCTACCTAAAACCTCCCATAGCATTATTTCTTTAACCCATGTAATCAACTTACTGATGAAATGTCTTCCCCTGAAATGTATCTTATGCAGTTTATCTTGGAGCAGCTTTGCAATTTAATTTGTCCATCAAAACCAGAGTCTGTGTACTTAGTGATTCTTAACAAGGCTCACACTCAGGAAGAATTTATCAGGGGTTCCATGACCAAAGTTCTTTATTCCAGTCCTGAGGTTGGTCTTTTAATGCGTGATGAGAAAAATAAAATCTGCAATCAGTTGGATATGGTAGGACTTGTAGAAAATGATTATAGAATGGAATTGCTTGTTGCTGGGAATATCATATCACTAGATCTGAGTGTTGAGCAAGTGTATGTGCAAGTGTGGAAGAAGGCGAATATTCAATCTTCAATTACTGTAGCTGCTGCGGCCATGCTACCTGCTGGTGCTACTGCTTCAACAAGGGATTGTCCTCCAATGATTGTGACATACCGTCTCCAGGTTAGCTCCTCCTCCTTCAGTTAGTGGGTTTGCGACTAATGCTCTGCTGCTAGTTTCTTGTGAAACTACTAAAGCATTAATTTATTCTGAAAATTAACACCGCTTTGCAAGATTGTATTAAAATTGTCGATTTTGTTTTCGTTTATTTTACTTTTCATCCACTTTTTGCCTTAAAGCCCAATTGTTGTGGTTTTCATAAATAAATATCACTGTTATAAACAATCCTCAATTTCCTTCTACACGCTCCCTCCAGGTAGATCGAGGTAAGGTCCAAGTGATTGAACAATTGCCCCCTCCAGGGTGTTAGAAGTTTTCTTGGTCATGCGGGGTTTATCGTCGCTTTATCTAAGATTTTTCTAAAATTGTTAAACCACTAACCCAATTCCTCCTCAAGGACGCCCCATTTGTGTTTACTGATGCTTGTTTTGAGGCTTTTGACAGGATTAAACAGGCACTGATTTCGGCTCCTATCATCCGTTTTCCCGAGTAGGATCTCCCGTTTGAGATAATGTGTGATGCAAGTGACTATGCAGTTGGGGCAGAGAAAGGAAAAGGTCTTGCATGCTATCTGCTATGCTAGTAAGACCTTAGATGAAGCTCAGGTTAGTTATGTTAATACTGAGAAGGAGATTCTAGCCATAGTCTATGCCTTGGACAAGTTCCACACTTATCTGATTGTGTCCAAGGTGATAATCCACATTGACCATGCGGCCCTTAAGTATCTACTCTCTAAGAAAGAAGCCAAACCTAGGCTTATTCGATGGATACTACATCTACAGGGGTTTGATCTGGAGATCCGCGACAAAAGGGGGCTGAGAATGTGGTTGCAGACCACCTATCTAGACTACCTATCTAGACTGAGATATGATGATGGTAAAGTGTCTACACCGATCGATGATTCATTTCCAGATGATCACCTATTTGCACTTGCCAGCCAGTCACCATGGTTCGCATACTATGCGAACTACATTGTGGGGCGAACTCGTCGATCTTACATATCAACAAAAGAAGTTCCTGCACGATATTCGATTCTACTTTTGGGATGATCCACATCTGTTCTCACACTGCAGATGGTTTGTATAAACGGTGTATTCCGGAATGAGAGGTACATGGTATAATTAACAGAATTCATTCTTCGTCATATGGAGGGCACCATGGACCCTTGAAAACTCATGCTAAACTGTAAGTGCGGGTTTTACTCGCCTACGATGTTCAAGGATGCACAAGCTTTTATTATGGCTTGTGATGCGTGCCAGAGGGCCGACACTATCTCGAGGGGGCATGAGATGCCACAAAATGGAATACTCAAGGTCGAGGTTTTTGATATGTGGGGGATAGACTACATGGGACCATTCCCATCGTCCAAGGGTAATCTGTATATCCTTGTTGCTGTATATTATGTGTCTAAGTGGGTGGAAGTCATTGCCTCACCTACTAACAATGCTAAGGCAGTCATCTCCATGTTAAAAAAGATCATCTTTCCCAGATTTGGAGTACCGAAGTCATTGATCAGTGATGGAGGCTCACACTTCCATGAGAAGCACTTAGAAACGCTCCTGCGCAAATATGAGGTATATCACCGCACCGGACTAGCCTACCACCCTCAAATGAGTGGGCAAATTGAGGTCTCCAACCGAGAGATCAAATATATACTTGAGAAGGTAGTGGCGAAGTCTAGGAAGGATCGGAGCGACAAGCTTGATGATACTCTCTGTGGCATATATGACCGCTTTCAAGACATCTATTGGTACTTCCCCGTATCGGTTAGTGTACGGCATGTCATTTGCCGGTAGAGATGAATACAAGGCTTATTGGACGATCAAACAACTCAACATGGATGCTAGACTAGCCGGTGAGAAGCGGCTACTACAGTTGAATGAGTTATATGAGTTTAGATTGCAAACCTATGACAGTGCCCGTGTCTACAAGGAAAAAACTAAGCGATGACACGATAGTCACATTCTTCAGAGGGAGTTCGCAGTGGGCGACAAAGTTCTACTATTTAACTCTACACTTGGGCTACCCTGCTGTCTCCCGACTCTCTCCTGGCGCCCGCTACGAAAGTAAGTACGAGGCTCAGGCTCATACTGCTGAGGCTCAGGCTCGGGCTGCGGAGGGTCCTGCTGCTGGGCTATGGGAGCAATGTGCTCACCCACATATATGTAATGTGCTTAGCCAGGTTGAAAGCGGGTGCGGCCCTGTAGGTCAGGCAAGGTGAAAAGCCTGTCTCGCCCAAACATCCAATACATGGCACCCGGGCGAAGCAACTGGTGCTCGCCTGTAGTCGGCGGAGTGAAGCAAAGTACGTTAAAGTTAAGCAAGTTACTCCCCAAGACCGGGACCTAATTGGCCTCAACAAAGTTAACAGTGGCCATGGCAATGTGGGTGATCAACCCACCCAGAGTGATGCGAGTTTTATATGGACTAATGGCCACCGATTTGAAATGCGTAGCCATGTGGTGAGCCAAGTTCATCGTATATCTTTCCTCCCCCTCAAGCACATACCCACCCAGAATCTGAAATTCTGTACCTTTAACATTCTGGGGCTCATCCCTCCCAAAAATAGTAAAACCCAATAACCTGAAGAAAACAATGGGGAAGGGGTGTTGAACATGGGAAGCATGTAAATGTTGCATACTAGGGGGTGCATCATTCCCAGTCAATTTGCCCCAAAAAGCAGAATTATTATGGGCGTTCCCAGCTTGCCTCTTTGTTTCAGTTGATAGGCCAAAAATCCTACCAAAACCCCTAATACTCAAACGGACATCTTGATTCATCAATCTAAAATACACAACAGTGATGTCCCTATAACCATTTCTATCCACCTCAAACGAACTCAAAAACTCAAGCGTCAACCTCTTAAACGTCAACCTTTATGTCCATTTCCGATGGAGTCAAAGATTCATTTGTTCTTTCGGTTGTGGGATGTAATGGACTAAATCAAAATGGCTCTTAAAACCTCTAAGCTTCCTTTCCATGAAGTAAAAGATGGTCTTTCCGTTGTCCCATAATCGTTTTTGGGTCAATTGGAAACAACCTCTCTGCAATTGTAGGGGTAAGGTAGCTTACACCCGACCCCACCTTACCCCGCTTCTTACGGAAGCCTCTTTGAAACAATGGGGGTAATGATGGTGTGCTAACCTTTATACTTGTATGCTAATATGGCTTTTTATACTCGGATGTGCTTATTTATTTTTATTTATTCCATGTGCTGCTAATGGACTTGTCCTTGCACCTTTTTACTAAAAAAAACCAGGCAAGATTTGTATTGTATTGAACATAAGAACTTGATAGATTCTTCTGACACACTTGGTAAACTGTCTGTTTGACATATTGTGAACACACTATTAATGCCTTGTTCTCACCTTATCATGTGAAAACCTCTGAGTGACTCGAGAAGTATGGTTTGAAATTACAGTTGTTTAACTTTTTGGCTGGTTTAAATATACAGCGCTTACGAGATGATCTGAAGTCCAACGACGAGCAGCTCAATCTACTGATGTATTGCTGTAAGATACAGGAGAATAGACAAGCCTTGTTAAAGTTAGGTCTACTTGTTGAAACAGCAAGACGTTGATGCTATGGAGGGCATTGTTTTGATTGTTGAGGCACTGACCTTGCAAGCTAATGAGAGTGATAATATAAGCATTACCAAGGGTGGTCTTACCGTCACTAGTAAGGAAATCTAATGTTCTTAGAACGATCTTAACTGCTACAGGTATGTTCTGATAGATGAATTTTAATTTGCTTGGTTTCTTTATCAAGGCTTTATTATATATGTAGCTAACTTTGACTACTTGGTGCTTATGCAGGGACTGGAATGCATCAGGAACAATGAGACTCTCTATGTAATGCCTTGTTTCCTATTATATACTTTAGTCCTGTTCTTGTAAGTGTAGCCCTGTTGACCATTCTAGTGATGTCTACACAGATGCTGGACTGGAGCATCTTTCAGTTCTGACAGCAAATTCTTGCTTTATATGATCCAGATGGCTCGTCACCTGCTAGTTGTTCTCAGCGTCTGTTGATCCAGATGGCTCGCCTCTGTTGCAGCCGAACCAGAAGAGACTGTACAATTTATGATGCAACATTGTAATCTTGATGTTATTGGTGCCCCGTGCCTTCGCTGATGTGTTATCTGGTGCTGTCAAGAGTTTAGTTTGTGCAGGCGGCTATAAAATATAAATGTAAATTCTATACTTGGGCAGATTGTAATCTCGATGTACAATTCAAGTGTTGAGTGGTTTTTAGATTATGACAATGTCCATTTTTTGGTGAATTGAATAACCTGCATTTTAATATTTCATCCTGCAATCAATCAAGTCTCAATCAGTAAACCTTTTTTCTTTCTTTACCAACTAGATCAAGCAACTAACATGTGTGAACCATTTCACCAAGTATATGTCCAGATAATTCAAAGTCTAGACAGTAAGCTTTTGGTCTTCCTGTCAAAAAACGTCAATGTACGATTATAA

mRNA sequence

ATGTTGAAAGATCTCTTGGACAGCCTTAAGCAGGAAAGCAGGGAGAATAGGCGAAAGTTCATACATGCTTGTATCTGTGGTTTGCAAATTCACGGAGATGAGAAGAAAGGGCAAACATCTTTGTTTATCTTGGAGCAGCTTTGCAATTTAATTTGTCCATCAAAACCAGAGTCTGTGTACTTAGTGATTCTTAACAAGGCTCACACTCAGGAAGAATTTATCAGGGGTTCCATGACCAAAGTTCTTTATTCCAGTCCTGAGGTTGGTCTTTTAATGCGTGATGAGAAAAATAAAATCTGCAATCAGTTGGATATGGTAGGACTTGTAGAAAATGATTATAGAATGGAATTGCTTGTTGCTGGGAATATCATATCACTAGATCTGAGTGTTGAGCAAGTGTATGTGCAAGTGTGGAAGAAGGCGAATATTCAATCTTCAATTACTGTAGCTGCTGCGGCCATGCTACCTGCTGGTGCTACTGCTTCAACAAGGGATTGTCCTCCAATGATTGTGACATACCGTCTCCAGCGCTTACGAGATGATCTGAAGTCCAACGACGAGCAGCTCAATCTACTGATGTATTGCTGTAAGATACAGGAGAATAGACAAGCCTTGTTAAAGTTAGGTCTACTTGTTGAAACAGCAAGACCATTACCAAGGGTGGTCTTACCGTCACTAGTAAGGAAATCTAATGTTCTTAGAACGATCTTAACTGCTACAGGGACTGGAATGCATCAGGAACAATGAGACTCTCTATATGCTGGACTGGAGCATCTTTCAGTTCTGACAGCAAATTCTTGCTTTATATGATCCAGATGGCTCGTCACCTGCTAGTTGTTCTCAGCGTCTGTTGATCCAGATGGCTCGCCTCTGTTGCAGCCGAACCAGAAGAGACTGTACAATTTATGATGCAACATTGTAATCTTGATGTTATTGGTGCCCCGTGCCTTCGCTGATGTGTTATCTGGTGCTGTCAAGAGTTTAGTTTGTGCAGGCGGCTATAAAATATAAATGTAAATTCTATACTTGGGCAGATTGTAATCTCGATGTACAATTCAAGTGTTGAGTGGTTTTTAGATTATGACAATGTCCATTTTTTGGTGAATTGAATAACCTGCATTTTAATATTTCATCCTGCAATCAATCAAGTCTCAATCAGTAAACCTTTTTTCTTTCTTTACCAACTAGATCAAGCAACTAACATGTGTGAACCATTTCACCAAGTATATGTCCAGATAATTCAAAGTCTAGACAGTAAGCTTTTGGTCTTCCTGTCAAAAAACGTCAATGTACGATTATAA

Coding sequence (CDS)

ATGTTGAAAGATCTCTTGGACAGCCTTAAGCAGGAAAGCAGGGAGAATAGGCGAAAGTTCATACATGCTTGTATCTGTGGTTTGCAAATTCACGGAGATGAGAAGAAAGGGCAAACATCTTTGTTTATCTTGGAGCAGCTTTGCAATTTAATTTGTCCATCAAAACCAGAGTCTGTGTACTTAGTGATTCTTAACAAGGCTCACACTCAGGAAGAATTTATCAGGGGTTCCATGACCAAAGTTCTTTATTCCAGTCCTGAGGTTGGTCTTTTAATGCGTGATGAGAAAAATAAAATCTGCAATCAGTTGGATATGGTAGGACTTGTAGAAAATGATTATAGAATGGAATTGCTTGTTGCTGGGAATATCATATCACTAGATCTGAGTGTTGAGCAAGTGTATGTGCAAGTGTGGAAGAAGGCGAATATTCAATCTTCAATTACTGTAGCTGCTGCGGCCATGCTACCTGCTGGTGCTACTGCTTCAACAAGGGATTGTCCTCCAATGATTGTGACATACCGTCTCCAGCGCTTACGAGATGATCTGAAGTCCAACGACGAGCAGCTCAATCTACTGATGTATTGCTGTAAGATACAGGAGAATAGACAAGCCTTGTTAAAGTTAGGTCTACTTGTTGAAACAGCAAGACCATTACCAAGGGTGGTCTTACCGTCACTAGTAAGGAAATCTAATGTTCTTAGAACGATCTTAACTGCTACAGGGACTGGAATGCATCAGGAACAATGA

Protein sequence

MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYLVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVAGNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRLRDDLKSNDEQLNLLMYCCKIQENRQALLKLGLLVETARPLPRVVLPSLVRKSNVLRTILTATGTGMHQEQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00324.1Spo00324.1mRNA


Homology
[Close]
BLAST of Spo00324.1 vs. NCBI nr
Match: gi|902170060|gb|KNA07774.1| (hypothetical protein SOVF_168870 [Spinacia oleracea])

HSP 1 Score: 393.3 bits (1009), Expect = 3.200e-106
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1 

		  

Query: 18  RKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYLVILNKAHTQEEFIRGS 77
           RKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYLVILNKAHTQEEFIRGS
Sbjct: 367 RKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYLVILNKAHTQEEFIRGS 426

Query: 78  MTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVAGNIISLDLSVEQVYVQV 137
           MTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVAGNIISLDLSVEQVYVQV
Sbjct: 427 MTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVAGNIISLDLSVEQVYVQV 486

Query: 138 WKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRLRDDLKSNDEQLNLLMYCCK 197
           WKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRLRDDLKSNDEQLNLLMYCCK
Sbjct: 487 WKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRLRDDLKSNDEQLNLLMYCCK 546

Query: 198 IQENRQALLKLGLLVETAR 217
           IQENRQALLKLGLLVETAR
Sbjct: 547 IQENRQALLKLGLLVETAR 565
[Close]
BLAST of Spo00324.1 vs. NCBI nr
Match: gi|902193211|gb|KNA12234.1| (hypothetical protein SOVF_127340 [Spinacia oleracea])

HSP 1 Score: 312.4 bits (799), Expect = 7.200e-82
Identity = 161/178 (90.45%), Postives = 166/178 (93.26%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 60
            +LKDLLDSL QES EN+R+FI ACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY
Sbjct: 3955 LLKDLLDSLLQESSENKRQFIRACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 4014

Query: 61   LVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVA 120
            L+ILNKAHTQEEFIRGSMTK  YSS EVG LMRD KNKICNQLDMVGLVE+DY MELLVA
Sbjct: 4015 LLILNKAHTQEEFIRGSMTKNPYSSAEVGPLMRDVKNKICNQLDMVGLVEDDYGMELLVA 4074

Query: 121  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            GNIISLDLSVEQVY QVWKKANIQSS TVAAAAMLPAGATASTRDCPPMIVTYRLQ L
Sbjct: 4075 GNIISLDLSVEQVYEQVWKKANIQSSNTVAAAAMLPAGATASTRDCPPMIVTYRLQGL 4132
[Close]
BLAST of Spo00324.1 vs. NCBI nr
Match: gi|731316100|ref|XP_010694206.1| (PREDICTED: auxin transport protein BIG [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 292.0 bits (746), Expect = 1.000e-75
Identity = 150/178 (84.27%), Postives = 158/178 (88.76%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 60
            +LKDLLDSL QES EN+R FI ACICGLQIHGDEKKGQ SLFILEQLCNLICPSKPESVY
Sbjct: 4096 LLKDLLDSLLQESSENKRLFIRACICGLQIHGDEKKGQISLFILEQLCNLICPSKPESVY 4155

Query: 61   LVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVA 120
             +ILNKAHTQEEFIRG+MTK  YSS EVG LMRD KNKIC+QLDM+GL+E+DY MELLVA
Sbjct: 4156 FLILNKAHTQEEFIRGNMTKNPYSSAEVGPLMRDVKNKICHQLDMLGLIEDDYGMELLVA 4215

Query: 121  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            GNIISLDLSV QVY QVWKKANIQSS TVA A ML AG TASTRDCPPMIVTYRLQ L
Sbjct: 4216 GNIISLDLSVAQVYEQVWKKANIQSSNTVANATMLAAGGTASTRDCPPMIVTYRLQGL 4273
[Close]
BLAST of Spo00324.1 vs. NCBI nr
Match: gi|870867827|gb|KMT18696.1| (hypothetical protein BVRB_2g028210 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 292.0 bits (746), Expect = 1.000e-75
Identity = 150/178 (84.27%), Postives = 158/178 (88.76%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 60
            +LKDLLDSL QES EN+R FI ACICGLQIHGDEKKGQ SLFILEQLCNLICPSKPESVY
Sbjct: 3541 LLKDLLDSLLQESSENKRLFIRACICGLQIHGDEKKGQISLFILEQLCNLICPSKPESVY 3600

Query: 61   LVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVA 120
             +ILNKAHTQEEFIRG+MTK  YSS EVG LMRD KNKIC+QLDM+GL+E+DY MELLVA
Sbjct: 3601 FLILNKAHTQEEFIRGNMTKNPYSSAEVGPLMRDVKNKICHQLDMLGLIEDDYGMELLVA 3660

Query: 121  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            GNIISLDLSV QVY QVWKKANIQSS TVA A ML AG TASTRDCPPMIVTYRLQ L
Sbjct: 3661 GNIISLDLSVAQVYEQVWKKANIQSSNTVANATMLAAGGTASTRDCPPMIVTYRLQGL 3718
[Close]
BLAST of Spo00324.1 vs. NCBI nr
Match: gi|469469090|gb|AGH32778.1| (auxin transport protein BIG [Krascheninnikovia arborescens])

HSP 1 Score: 288.9 bits (738), Expect = 8.500e-75
Identity = 151/178 (84.83%), Postives = 159/178 (89.33%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 60
            +LKDLLDSL QES EN+R+FI ACICGLQIH DEKKGQ SLFILEQLCNLICPSKPESVY
Sbjct: 4090 LLKDLLDSLLQESSENKRQFIRACICGLQIHRDEKKGQISLFILEQLCNLICPSKPESVY 4149

Query: 61   LVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVA 120
            L+ILNKAHTQEEFIRGSMTK  YSS EVG LMRD KNKIC+QLDMVGLVE+DY MELLVA
Sbjct: 4150 LLILNKAHTQEEFIRGSMTKNPYSSAEVGPLMRDVKNKICHQLDMVGLVEDDYGMELLVA 4209

Query: 121  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            GNIISLDLSV QVY QVWKKANIQSS TVA+A M P GAT S+RDCPPMIVTYRLQ L
Sbjct: 4210 GNIISLDLSVAQVYEQVWKKANIQSSNTVASATMSPGGAT-SSRDCPPMIVTYRLQGL 4266
[Close]
BLAST of Spo00324.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKK4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_168870 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.200e-106
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1 

		  

Query: 18  RKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYLVILNKAHTQEEFIRGS 77
           RKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYLVILNKAHTQEEFIRGS
Sbjct: 367 RKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYLVILNKAHTQEEFIRGS 426

Query: 78  MTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVAGNIISLDLSVEQVYVQV 137
           MTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVAGNIISLDLSVEQVYVQV
Sbjct: 427 MTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVAGNIISLDLSVEQVYVQV 486

Query: 138 WKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRLRDDLKSNDEQLNLLMYCCK 197
           WKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRLRDDLKSNDEQLNLLMYCCK
Sbjct: 487 WKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRLRDDLKSNDEQLNLLMYCCK 546

Query: 198 IQENRQALLKLGLLVETAR 217
           IQENRQALLKLGLLVETAR
Sbjct: 547 IQENRQALLKLGLLVETAR 565
[Close]
BLAST of Spo00324.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QY85_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_127340 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 5.000e-82
Identity = 161/178 (90.45%), Postives = 166/178 (93.26%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 60
            +LKDLLDSL QES EN+R+FI ACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY
Sbjct: 3955 LLKDLLDSLLQESSENKRQFIRACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 4014

Query: 61   LVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVA 120
            L+ILNKAHTQEEFIRGSMTK  YSS EVG LMRD KNKICNQLDMVGLVE+DY MELLVA
Sbjct: 4015 LLILNKAHTQEEFIRGSMTKNPYSSAEVGPLMRDVKNKICNQLDMVGLVEDDYGMELLVA 4074

Query: 121  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            GNIISLDLSVEQVY QVWKKANIQSS TVAAAAMLPAGATASTRDCPPMIVTYRLQ L
Sbjct: 4075 GNIISLDLSVEQVYEQVWKKANIQSSNTVAAAAMLPAGATASTRDCPPMIVTYRLQGL 4132
[Close]
BLAST of Spo00324.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FSK4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g028210 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 7.000e-76
Identity = 150/178 (84.27%), Postives = 158/178 (88.76%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 60
            +LKDLLDSL QES EN+R FI ACICGLQIHGDEKKGQ SLFILEQLCNLICPSKPESVY
Sbjct: 3541 LLKDLLDSLLQESSENKRLFIRACICGLQIHGDEKKGQISLFILEQLCNLICPSKPESVY 3600

Query: 61   LVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVA 120
             +ILNKAHTQEEFIRG+MTK  YSS EVG LMRD KNKIC+QLDM+GL+E+DY MELLVA
Sbjct: 3601 FLILNKAHTQEEFIRGNMTKNPYSSAEVGPLMRDVKNKICHQLDMLGLIEDDYGMELLVA 3660

Query: 121  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            GNIISLDLSV QVY QVWKKANIQSS TVA A ML AG TASTRDCPPMIVTYRLQ L
Sbjct: 3661 GNIISLDLSVAQVYEQVWKKANIQSSNTVANATMLAAGGTASTRDCPPMIVTYRLQGL 3718
[Close]
BLAST of Spo00324.1 vs. UniProtKB/TrEMBL
Match: M4QUG0_9CARY (Auxin transport protein BIG OS=Krascheninnikovia arborescens GN=BIG PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.900e-75
Identity = 151/178 (84.83%), Postives = 159/178 (89.33%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 60
            +LKDLLDSL QES EN+R+FI ACICGLQIH DEKKGQ SLFILEQLCNLICPSKPESVY
Sbjct: 4090 LLKDLLDSLLQESSENKRQFIRACICGLQIHRDEKKGQISLFILEQLCNLICPSKPESVY 4149

Query: 61   LVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVA 120
            L+ILNKAHTQEEFIRGSMTK  YSS EVG LMRD KNKIC+QLDMVGLVE+DY MELLVA
Sbjct: 4150 LLILNKAHTQEEFIRGSMTKNPYSSAEVGPLMRDVKNKICHQLDMVGLVEDDYGMELLVA 4209

Query: 121  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            GNIISLDLSV QVY QVWKKANIQSS TVA+A M P GAT S+RDCPPMIVTYRLQ L
Sbjct: 4210 GNIISLDLSVAQVYEQVWKKANIQSSNTVASATMSPGGAT-SSRDCPPMIVTYRLQGL 4266
[Close]
BLAST of Spo00324.1 vs. UniProtKB/TrEMBL
Match: F6GVU9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00960 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.000e-70
Identity = 135/178 (75.84%), Postives = 155/178 (87.08%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 60
            +LKDLLD L  ES EN+R+FI ACICGLQIHG+E+KG+TSLFILEQLCNLICPSKPESVY
Sbjct: 4055 LLKDLLDGLLLESSENKRQFIRACICGLQIHGEERKGRTSLFILEQLCNLICPSKPESVY 4114

Query: 61   LVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVA 120
            L++LNKAHTQEEFIRGSMTK  YSS E+G LMRD KNKIC+QLD++GL+E+DY MELLVA
Sbjct: 4115 LLVLNKAHTQEEFIRGSMTKNPYSSAEIGPLMRDVKNKICHQLDLLGLLEDDYGMELLVA 4174

Query: 121  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            GNIISLDLS+ QVY QVWKK+N QSS T++ A +L + AT S RDCPPM VTYRLQ L
Sbjct: 4175 GNIISLDLSIAQVYEQVWKKSNSQSSNTISGATLLSSNATTSARDCPPMTVTYRLQGL 4232
[Close]
BLAST of Spo00324.1 vs. ExPASy Swiss-Prot
Match: BIG_ARATH (Auxin transport protein BIG OS=Arabidopsis thaliana GN=BIG PE=1 SV=2)

HSP 1 Score: 243.8 bits (621), Expect = 2.000e-63
Identity = 125/177 (70.62%), Postives = 147/177 (83.05%), Query Frame = 1 

		  

Query: 2    LKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYL 61
            LKDLLD L  ES EN+R+FI AC+ GLQ H +E KG+T LFILEQLCNLICPSKPE+VY+
Sbjct: 4101 LKDLLDGLLLESSENKRQFIRACVSGLQTHAEENKGRTCLFILEQLCNLICPSKPEAVYM 4160

Query: 62   VILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVAG 121
            +ILNK+HTQEEFIRGSMTK  YSS E+G LMRD KNKIC QLD++GL+E+DY MELLVAG
Sbjct: 4161 LILNKSHTQEEFIRGSMTKNPYSSAEIGPLMRDVKNKICQQLDLLGLLEDDYGMELLVAG 4220

Query: 122  NIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            NIISLDLS+ QVY  VWKK+N QSS ++  +A+L + A A +RDCPPM VTYRLQ L
Sbjct: 4221 NIISLDLSIAQVYELVWKKSN-QSSTSLTNSALLASNA-APSRDCPPMTVTYRLQGL 4275
[Close]
BLAST of Spo00324.1 vs. ExPASy Swiss-Prot
Match: BIG_ORYSJ (Auxin transport protein BIG OS=Oryza sativa subsp. japonica GN=Os09g0247700 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.800e-62
Identity = 125/178 (70.22%), Postives = 146/178 (82.02%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVY 60
            +LKDLLDSL  ES  N+R+FI ACI GLQ H  EKK +TSLFILEQLCNLICP KPE VY
Sbjct: 3963 LLKDLLDSLLVESTANKRQFIRACISGLQKHVKEKKRRTSLFILEQLCNLICPVKPEPVY 4022

Query: 61   LVILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVA 120
            L+ILNKAHTQEEFIRGSMT+  YSS E+G LMRD KNKIC+QLD++GL+E+DY MELLVA
Sbjct: 4023 LLILNKAHTQEEFIRGSMTRNPYSSAEIGPLMRDVKNKICHQLDLIGLLEDDYGMELLVA 4082

Query: 121  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            GNIISLDLS+ QVY QVW+K + Q+  +++ A+ L A A +S RDCPPM VTYRLQ L
Sbjct: 4083 GNIISLDLSISQVYEQVWRKHHGQTQHSLSNASQLSA-AASSVRDCPPMTVTYRLQGL 4139
[Close]
BLAST of Spo00324.1 vs. ExPASy Swiss-Prot
Match: Y3893_DICDI (Probable E3 ubiquitin-protein ligase DDB_G0283893 OS=Dictyostelium discoideum GN=DDB_G0283893 PE=3 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 2.700e-28
Identity = 78/178 (43.82%), Postives = 108/178 (60.67%), Query Frame = 1 

		  

Query: 2    LKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYL 61
            L++L+ SL  ES ++ +KF+ A I  L  +  +  G+T +FI EQLCN++CP+KP+ +Y 
Sbjct: 4930 LQELMKSLNNESVQDNKKFMAANIKALAKY--QSDGRTPIFIFEQLCNIVCPTKPDPIYQ 4989

Query: 62   VILNKAHTQEEFIRGSMTKVLYSSPEV-GLLMRDEKNKICNQLDMVGLVENDYRMELLVA 121
            +IL KA +QEE+IRGSM +  Y+S    G LMRD KNKIC  LD+   +++D  MELLV 
Sbjct: 4990 LILFKAASQEEYIRGSMNRNPYTSNTFGGPLMRDVKNKICKALDLGSFLDDDNGMELLVD 5049

Query: 122  GNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
              II LDL +++VY  VWKK         +  A+  A          PM V YRLQ L
Sbjct: 5050 NKIIKLDLPIKKVYELVWKK---------SPQALRTADINI------PMNVVYRLQGL 5090
[Close]
BLAST of Spo00324.1 vs. ExPASy Swiss-Prot
Match: UBR4_MOUSE (E3 ubiquitin-protein ligase UBR4 OS=Mus musculus GN=Ubr4 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.300e-19
Identity = 65/184 (35.33%), Postives = 97/184 (52.72%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPE-SV 60
            ML ++L+ +   +    + F+  CI   + +  +   +T +FI E+LC++I P + E + 
Sbjct: 4287 MLLEMLEDMTTGTESETKAFMAVCIETAKRYNLDDY-RTPVFIFERLCSIIYPEENEVTE 4346

Query: 61   YLVILNKAHTQEEFIRGSMTKVLYSS--PEVGLLMRDEKNKICNQLDMVGLVENDYRMEL 120
            + V L K   QE+F++G M    YSS  P +G LMRD KNKIC   D+V L+E+D  MEL
Sbjct: 4347 FFVTLEKDPQQEDFLQGRMPGNPYSSNEPGIGPLMRDIKNKICQDCDLVALLEDDSGMEL 4406

Query: 121  LVAGNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQR 180
            LV   IISLDL V +VY +VW                       +T +  PM + YR++ 
Sbjct: 4407 LVNNKIISLDLPVAEVYKKVW----------------------CATNEGEPMRIVYRMRG 4447

Query: 181  LRDD 182
            L  D
Sbjct: 4467 LLGD 4447
[Close]
BLAST of Spo00324.1 vs. ExPASy Swiss-Prot
Match: UBR4_RAT (E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus GN=Ubr4 PE=1 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 2.300e-19
Identity = 65/184 (35.33%), Postives = 97/184 (52.72%), Query Frame = 1 

		  

Query: 1    MLKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPE-SV 60
            ML ++L+ +   +    + F+  CI   + +  +   +T +FI E+LC++I P + E + 
Sbjct: 4301 MLLEMLEDMTTGTESETKAFMAVCIETAKRYNLDDY-RTPVFIFERLCSIIYPEENEVTE 4360

Query: 61   YLVILNKAHTQEEFIRGSMTKVLYSS--PEVGLLMRDEKNKICNQLDMVGLVENDYRMEL 120
            + V L K   QE+F++G M    YSS  P +G LMRD KNKIC   D+V L+E+D  MEL
Sbjct: 4361 FFVTLEKDPQQEDFLQGRMPGNPYSSNEPGIGPLMRDIKNKICQDCDLVALLEDDSGMEL 4420

Query: 121  LVAGNIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQR 180
            LV   IISLDL V +VY +VW                       +T +  PM + YR++ 
Sbjct: 4421 LVNNKIISLDLPVAEVYKKVW----------------------CTTNEGEPMRIVYRMRG 4461

Query: 181  LRDD 182
            L  D
Sbjct: 4481 LLGD 4461
[Close]
BLAST of Spo00324.1 vs. TAIR (Arabidopsis)
Match: AT3G02260.1 (auxin transport protein (BIG))

HSP 1 Score: 243.8 bits (621), Expect = 1.100e-64
Identity = 125/177 (70.62%), Postives = 147/177 (83.05%), Query Frame = 1 

		  

Query: 2    LKDLLDSLKQESRENRRKFIHACICGLQIHGDEKKGQTSLFILEQLCNLICPSKPESVYL 61
            LKDLLD L  ES EN+R+FI AC+ GLQ H +E KG+T LFILEQLCNLICPSKPE+VY+
Sbjct: 4101 LKDLLDGLLLESSENKRQFIRACVSGLQTHAEENKGRTCLFILEQLCNLICPSKPEAVYM 4160

Query: 62   VILNKAHTQEEFIRGSMTKVLYSSPEVGLLMRDEKNKICNQLDMVGLVENDYRMELLVAG 121
            +ILNK+HTQEEFIRGSMTK  YSS E+G LMRD KNKIC QLD++GL+E+DY MELLVAG
Sbjct: 4161 LILNKSHTQEEFIRGSMTKNPYSSAEIGPLMRDVKNKICQQLDLLGLLEDDYGMELLVAG 4220

Query: 122  NIISLDLSVEQVYVQVWKKANIQSSITVAAAAMLPAGATASTRDCPPMIVTYRLQRL 179
            NIISLDLS+ QVY  VWKK+N QSS ++  +A+L + A A +RDCPPM VTYRLQ L
Sbjct: 4221 NIISLDLSIAQVYELVWKKSN-QSSTSLTNSALLASNA-APSRDCPPMTVTYRLQGL 4275
The following BLAST results are available for this feature:
BLAST of Spo00324.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902170060|gb|KNA07774.1|3.2e-106100.hypothetical protein SOVF_1688... [more]
gi|902193211|gb|KNA12234.1|7.2e-8290.4hypothetical protein SOVF_1273... [more]
gi|731316100|ref|XP_010694206.1|1.0e-7584.2PREDICTED: auxin transport pro... [more]
gi|870867827|gb|KMT18696.1|1.0e-7584.2hypothetical protein BVRB_2g02... [more]
gi|469469090|gb|AGH32778.1|8.5e-7584.8auxin transport protein BIG [K... [more]
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BLAST of Spo00324.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QKK4_SPIOL2.2e-106100.Uncharacterized protein OS=Spi... [more]
A0A0K9QY85_SPIOL5.0e-8290.4Uncharacterized protein OS=Spi... [more]
A0A0J8FSK4_BETVU7.0e-7684.2Uncharacterized protein OS=Bet... [more]
M4QUG0_9CARY5.9e-7584.8Auxin transport protein BIG OS... [more]
F6GVU9_VITVI2.0e-7075.8Putative uncharacterized prote... [more]
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BLAST of Spo00324.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
BIG_ARATH2.0e-6370.6Auxin transport protein BIG OS... [more]
BIG_ORYSJ2.8e-6270.2Auxin transport protein BIG OS... [more]
Y3893_DICDI2.7e-2843.8Probable E3 ubiquitin-protein ... [more]
UBR4_MOUSE2.3e-1935.3E3 ubiquitin-protein ligase UB... [more]
UBR4_RAT2.3e-1935.3E3 ubiquitin-protein ligase UB... [more]
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BLAST of Spo00324.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G02260.11.1e-6470.6auxin transport protein (BIG)[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025704E3 ubiquitin ligase, UBR4PFAMPF13764E3_UbLigase_R4coord: 78..179
score: 5.1
NoneNo IPR availablePANTHERPTHR21725PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600coord: 1..216
score: 9.3
NoneNo IPR availablePANTHERPTHR21725:SF1E3 UBIQUITIN-PROTEIN LIGASE UBR4coord: 1..216
score: 9.3

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo021900.70Barchart | Table