Spo00344 (gene)

Overview
NameSpo00344
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01188 : 65466 .. 67413 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAAAGGCCTACCAAACATTGAGGGAAACATGAGGTATAGTTCCCTTACCCTTTCTTGATTCCCTCAATTCAAACTACCCCTATGTTGAATAAGGCATATTATATTCATATTTAACAAACGGTTAAAGGATTAAGTGAGTTGAATTGACCCATCTTATTTGAACATAACTCTACTCTTGTTTTTAAATATAAACCTAAAATGTATTCAATTAACATTATGATTGTTATAAGTTCTTTTAGGGGAATTAAGTAAATTGACTTTCGACCACCTAGTATAAAAATGTTAGAACAACCGCTGATGAAAACAATATAATTCTTTATTGTGGAGACAGAGTTAACTATGCATATTTTTTTTCTTTTTGTAACGTCCTAATATGTAGTTTTATAAGTACGAAAATTCCTTTACATTTGTCTTTGACTCTAATATACAACGTCTACTGGCCCTTATATTTCATATAAACTTAATAAGATCATGAGATATATATGGACCACTTCACTATATAGGTAATGATATGATACTCCGTATAAAGTGAAATTAATGGCAATTAATATAAAGTGGGTTAGTGGAACACCTTCATACTGTATAAATAGAGAGTAGCTTTTTATTACTCCGTATACAGTGGAGTCAGTGGAACAGTATAATACCAGTGGTCAATAGACACATACCCATCTATTAAAGGTGAAAAGCTTTAGCAAACTGTATTAAAATTTAACAACATTCATAATATTAGTAAACCTATATTAGACTCCTATAATTGAGTAGCTTTATCAAATTGTACAAAAATTTAAAATAACATTCGTGGTCCACTACCCATAAATTAAATGTGAATGATGTTATCAAATTAAATTCATAATAATATTAGTGGACCCTTACCCATCAATTAAAGGTGTTCAACCTTATCAAAATGTATTGTAATTCAACACAACATTAGTGAACCCGATTTTTTTTGAAATAAAAGTGTTATACTTAACCAGATGTGAATTAAAACGTTGCAATTAAAAATTCTAAATGAGAAATTTTGATTTGTTGCAAATGAACTCGACTTAATCTGATCCGATCTGATCCGATCTTTTATCGTACCCTATAACAACCCAAACAATATAAATATTTTGTACATTGTTAAAAGGACAAAAAGTCGCCGGGGAATGGGAATCAAGAACGTTTCCGTTAACATGCGCCACCAACACTAAATATTCGCCAAACTCCCTCTCTCTCGTCTCTTTCTCACTCCTCACTACTCCCAAATTCCCGAAAACCTCCCATTTTCACCTTCTTCTCCGGTCAAACCTTCTGATTTTCTGGTACTCTCTCTCTCCTCCTACCATTATTTTTCATTTCGCGTCTAATTTCAAATGCCAATGTTTTAGTTTTCTTATTAGGTAGAACTTTGAATTTGTTGTTCTGAGTAATGAATGAAGGAATGGTGTAAATGCGTGATCAGCTTTTCTGGGTCATGCATTTTTTATTTTTTTATTTCGCTTATTACAATTGCACTTAATTCGTGATTTTGTACTGTATTTTTTATTTGCTGGGTGGTATTGAAATTACATTGAGTTATGATTATGGCGTTATGCAATTTTTTCTTCTCAAACAATAAACCCTACTGTATTTAATTTCTAGGTTATTATTCAGATTGTTTGTAGAAATTTGGTATTGCCCATTATTGTTGAATTTGTTGTTGATGTTGTTTTGTATAATCATTTCTAGAAATTTGTGTTGCCTGTTATTGTTTAAGCTAACTTTCGTTGTTGTTGCTGGTAGAAATCGATAAATTTGGATTGCTCTGCTTGGTTAAGAATTTTAGTGGCTTTTTTGAATTGGGGTTTTGCTAATTATTGTTAATCCTAATTTTGTTTGTTGCTGAAAAAAAATACTGGATTGAAATTTTGCATTGTGTTTATATCAGCAGGGGGTTTATTATGTCTTTTCTAGAAGGGGATTGA

mRNA sequence

ATGAGAAAAGGCCTACCAAACATTGAGGGAAACATGAGAACGTTTCCGTTAACATGCGCCACCAACACTAAATATTCGCCAAACTCCCTCTCTCTCGTCTCTTTCTCACTCCTCACTACTCCCAAATTCCCGAAAACCTCCCATTTTCACCTTCTTCTCCGGTCAAACCTTCTGATTTTCTGCAGGGGGTTTATTATGTCTTTTCTAGAAGGGGATTGA

Coding sequence (CDS)

ATGAGAAAAGGCCTACCAAACATTGAGGGAAACATGAGAACGTTTCCGTTAACATGCGCCACCAACACTAAATATTCGCCAAACTCCCTCTCTCTCGTCTCTTTCTCACTCCTCACTACTCCCAAATTCCCGAAAACCTCCCATTTTCACCTTCTTCTCCGGTCAAACCTTCTGATTTTCTGCAGGGGGTTTATTATGTCTTTTCTAGAAGGGGATTGA

Protein sequence

MRKGLPNIEGNMRTFPLTCATNTKYSPNSLSLVSFSLLTTPKFPKTSHFHLLLRSNLLIFCRGFIMSFLEGD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00344.1Spo00344.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo00344.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00344.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00344.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo00344.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo142250.76Barchart | Table
Spo216910.74Barchart | Table
Spo270810.74Barchart | Table
Spo148810.73Barchart | Table
Spo012610.73Barchart | Table
Spo113170.73Barchart | Table
Spo144160.73Barchart | Table
Spo108150.72Barchart | Table
Spo088500.72Barchart | Table
Spo169110.72Barchart | Table
Spo025130.72Barchart | Table
Spo156390.72Barchart | Table
Spo057810.72Barchart | Table
Spo115580.72Barchart | Table
Spo071840.71Barchart | Table
Spo061640.71Barchart | Table
Spo199650.71Barchart | Table
Spo205440.71Barchart | Table
Spo130290.71Barchart | Table
Spo103160.71Barchart | Table
Spo102350.71Barchart | Table
Spo096050.71Barchart | Table
Spo271020.71Barchart | Table
Spo238170.71Barchart | Table
Spo019340.70Barchart | Table
Spo235490.70Barchart | Table
Spo227600.70Barchart | Table
Spo028130.70Barchart | Table
Spo210670.70Barchart | Table
Spo002830.70Barchart | Table
Spo198980.70Barchart | Table
Spo076190.70Barchart | Table
Spo092900.70Barchart | Table
Spo163390.70Barchart | Table
Spo214960.69Barchart | Table
Spo037360.69Barchart | Table
Spo136140.69Barchart | Table
Spo185750.69Barchart | Table
Spo059900.69Barchart | Table
Spo140080.69Barchart | Table
Spo209120.69Barchart | Table
Spo085720.69Barchart | Table
Spo050730.69Barchart | Table
Spo248570.69Barchart | Table
Spo018400.69Barchart | Table
Spo173910.68Barchart | Table
Spo019250.68Barchart | Table
Spo173290.68Barchart | Table
Spo231580.68Barchart | Table
Spo170320.68Barchart | Table
Spo149420.68Barchart | Table
Spo166950.68Barchart | Table
Spo140870.68Barchart | Table
Spo258760.68Barchart | Table
Spo053410.68Barchart | Table
Spo057310.68Barchart | Table
Spo264300.68Barchart | Table
Spo060040.68Barchart | Table
Spo024800.68Barchart | Table
Spo065060.68Barchart | Table
Spo158810.68Barchart | Table
Spo083390.68Barchart | Table
Spo198740.68Barchart | Table
Spo087130.68Barchart | Table
Spo089690.68Barchart | Table
Spo198700.68Barchart | Table
Spo122340.68Barchart | Table
Spo062930.67Barchart | Table
Spo012430.67Barchart | Table
Spo022800.67Barchart | Table
Spo024840.67Barchart | Table
Spo026430.67Barchart | Table
Spo049070.67Barchart | Table
Spo054020.67Barchart | Table
Spo059280.67Barchart | Table
Spo069490.67Barchart | Table
Spo094990.67Barchart | Table
Spo119180.67Barchart | Table
Spo119610.67Barchart | Table
Spo121070.67Barchart | Table
Spo125050.67Barchart | Table
Spo134900.67Barchart | Table
Spo152220.67Barchart | Table
Spo158730.67Barchart | Table
Spo162970.67Barchart | Table
Spo168040.67Barchart | Table
Spo173860.67Barchart | Table
Spo210460.67Barchart | Table
Spo217230.67Barchart | Table
Spo228110.67Barchart | Table
Spo235270.67Barchart | Table
Spo235880.67Barchart | Table
Spo240680.67Barchart | Table
Spo242550.67Barchart | Table
Spo246130.67Barchart | Table
Spo248080.67Barchart | Table
Spo251070.67Barchart | Table
Spo270040.67Barchart | Table
Spo270620.67Barchart | Table
Spo271980.67Barchart | Table
Spo120890.66Barchart | Table
Spo025730.66Barchart | Table
Spo020680.66Barchart | Table
Spo245660.66Barchart | Table
Spo280580.66Barchart | Table
Spo247120.66Barchart | Table
Spo018580.66Barchart | Table
Spo250370.66Barchart | Table
Spo154200.66Barchart | Table
Spo154610.66Barchart | Table
Spo143420.66Barchart | Table
Spo250780.66Barchart | Table
Spo161860.66Barchart | Table
Spo162400.66Barchart | Table
Spo114310.66Barchart | Table
Spo097520.66Barchart | Table
Spo096740.66Barchart | Table
Spo096710.66Barchart | Table
Spo095540.66Barchart | Table
Spo254830.66Barchart | Table
Spo174980.66Barchart | Table
Spo187350.66Barchart | Table
Spo065050.66Barchart | Table
Spo057280.66Barchart | Table
Spo048680.66Barchart | Table
Spo209330.66Barchart | Table
Spo258380.66Barchart | Table
Spo038670.66Barchart | Table
Spo212140.66Barchart | Table
Spo212150.66Barchart | Table
Spo213230.66Barchart | Table
Spo029320.66Barchart | Table
Spo220280.66Barchart | Table
Spo027920.66Barchart | Table
Spo263940.66Barchart | Table
Spo089970.65Barchart | Table
Spo005360.65Barchart | Table
Spo192450.65Barchart | Table
Spo089700.65Barchart | Table
Spo084350.65Barchart | Table
Spo177780.65Barchart | Table
Spo251590.65Barchart | Table
Spo200710.65Barchart | Table
Spo054310.65Barchart | Table
Spo207700.65Barchart | Table
Spo014710.65Barchart | Table
Spo015480.65Barchart | Table
Spo024070.65Barchart | Table
Spo268110.65Barchart | Table
Spo093810.65Barchart | Table
Spo268580.65Barchart | Table
Spo271620.65Barchart | Table
Spo245490.65Barchart | Table
Spo028900.65Barchart | Table
Spo016860.65Barchart | Table