Spo00346 (gene) | SpinachBase

Overview


Name	Spo00346
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RNA-binding protein 24
Location	SpoScf_03434 : 5952 .. 14428 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACTTTTCTCTGTATATCCTGTAAATTTCGAACTCATTTCTTCGCCAACTTCTCGTTATGATCTTCGTCTCCAATTCTCTCTCTTTTGACTTTGTTTGACTCCATTTTTAGGGTTTTCTTTATTCTCCCCCTGTCCCATCTCTTCTTAAGAAGAAGTATTATTCTTTTTTCTCTTTAATAATTCAAATTTCTCCTTTTTCTGTCTCCTCTAATTATTAAAAGTCGTCTACTTTTTATCAATAAAGGTTTTTGATTTTGATTTTGATTTTGATTCATCCTCTTAAAAATCCACCTTATGCTCTGATTGGTCGATTTCTAGGGTTTTTCTAGGGTTTTGTTGTTGTTGTTCTTCTTCTTATATACTGCTGTCTTCCTTCATTTTTCAACCTTTAATTTCTCTCTTTTTTTTAATTTTAATTAAAAAAACTGTATTATTTGGGTGAAAGTTCTCTAAATTGGGTTTGTTCTGGTGATCAATCAATTGAATTGATGGCGTATCAGCCGAGTCCGGGTCGACCCGGATCGGGATCTAGCTCGGGTTCGGGGTTTCCGTATTTGAATTCGCCGTTCGGAGACACCACCTATACCAAGGTGTTTGTTGGAGGTCTGGCTTGGGAGACTCAAAGCGAGACGATGCGGCGGTATTTCGAGCATTTTGGTGAGATTCTTGAGGCTGTTGTTATCACTGATAAGAATACTGGTCGCTCCAAGGGCTATGGTTTTGTGAGTAATTTTCTCTCTTTATTATTTATTATGGAGGTATAAATGTGTTATGTTTTGAGATAATTATTCATAAGTGAGTTTAGTCAAATGTGGCCTATTAAAGTGAGACGAGTAGTATAAATTATTATTAATGATATGATATTCTGATGTTCAATGCTGCTATGCTTGTGAAGTGACTGTGCTTGTGTTTTTGTGTGCTTGCTTTGGAGGGTTTAGGTGACTTTTCGGGATCCTGAATCTGCAAGGAGAGCTTGTGCTGATCCAACACCAATAATTGATGGACGGCGTGCTAATTGTAATTTAGCTTCACTCGGACGACCTCGGCCTGCTCTTTCGTTTGGTATATAGTCTTAATTTAGAGTTCAACTTTAGTAGTTTGTCTTGTTTGTGTCATGTGTTGGTTAAAGAATAGTTCATTGTTTGTTTCTAGATTATGGTAAGTGTTATTATAAGCTTACTCCTATCAGTTAAATTTTGATTGACATGCAAAATTTTGTGAATTAAGCTTCTCTGCACCATAAAAGTCATTTATTGGTGGTGTCTTCTATTCAACTGGGATATATCTTTGTATAGGGTGGTTTTTGAGGTATGAGATATTTTTTGCTGCGGTGTTCAATTTTTTTTAGTAGTTTGCATGTTGAACCATCATCAATTAGCAAGGTCTCAAAGAGGTAGACTGGTGAGTGCTGAAGTTGTTAGTGTTGATGTCAATAATTGCTTTAACGAATGAATTTTTGTCCTGCAAAAGATGTTTAACAAATTTAGCCTATGTGTAGGATGGGGTTCAAGGATATTGATTATTTACATCATTTATTTTTAGCATTGTAAGTGAGTTTTGGCGAGCAAGTAACTTTTAATAAATGATTTTGGATGAACTTATCTTTTCATTTTTTAAGTTATGGTGATTCTTAACCAATAGGTTTACTGACTAGAGTGTATAAGAGCATTTCTGAGTTCTAAAGAAATGCTTCTTAGTTTGGTTATTTAACAACAATGTGTTTGTTGAGGGCTGTCGAATTTCGGAGGCTACTTTAGTTGCAAACTAGGTGGTGGAAGATGTTTGGAGGAGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGAGAGAAGGGGGTATTTATTTAAGTTGGATTTAGACAAAGCATATGACTTGGTATATTGGAGGTTTCAAGATAAAATACTGGTGCGTAAGGGTTTTGATTGGTCACTGGTGACAACATGGTTTAGGTCCCTTTTAGGCTGCCTTTCTACTTCTTATTGGAGACTTGGGGTTGGGATTTATACTGGTGGTCGATTTTGACAAATAGGAGGTGGGTGGTTGTTTCCTGTTAGAAATTTTCAGGTGATTTTATTCTCAGTCTTGATCTTTTTGGCAATAATTTAAGTTCAAGAATGTGCTTACTAATAAGCCATGTATTTTACATCTCGATTTGGATTCTTTAACTTTGTATACGGTTGTTGTTTTTTAGGCGCATTGCACATTACACACAGTGGGTGCCTATATGTGCTAATTTTAGGCGTCTTTTCTTTTTGGAATGCTGTAGTTGATAAAGTATCTAAGAGGTTGTAAAACCTCGCCGATTTGGGGTAGCAATTTGAGTTTTCTTTTGGAAATTTCCCTTGGCATCGGTTGATTAGGAGTGGGTTTAATCTTAACAGGAGTTATTGACATACTTCTGCCAAGAATGAAGTTCTCTGTCCATACCCGTGGAAGTTTATTTCAAAGGTTTCATCTTTGTTCTTTCCTTGGTTGAGTTTCATGTGGGTAATCTACTGTGGGGTTTTGGGAGGATTCTTGTGCAGGAAAGCGCCTTTTTCCTTTACTTTCTTTTTTTTTTTTTAAAAAGAAATTATTTGTCCGTCTTTTACCACTCCAATGTCTCACTTTTTGGTTTGAGAGGCTGTTCATCACGTAGCCTCCATTTTTTAAGTAATATCAGGATAGCAATTAGGTAACGTGGCCTTTCTTTTAAGGATCCAATGCATTTTTGATAAGATTAATTCTTGATTTTAGAGCTTGCGTGTTGATTCTTCGGGTTATTTTTCCGCAAATCTTTCTTCAAACTTGCTCCAATTCTCAATTCTCCCTTTTCCCAACATTTATTTGGACGGTGAACATTCCTATGAAGGTTAAGGAATTTGTTGAACAATTTTGGAAACACTTGCTGATTATCCTGTGCAGCATTCAGATGAAGCTTTGTCACCCAGTGTTTGTTTTATCTATTATAAAGGTGCCGAATCGGGTTCTTGTTTCTATCTTCACTGAGAGGTGGCTGATGCTTTATGGTCTAATTTCTATTTTGAAGGGGCATTTTGGTTATGCTCTGTTTTCCGATGTGCCATATGCAGGTGAATTTGCTTGGTTTTGGGAGGGAATACAACAAAAGGTACTTTTGAGGTGTTCTTTTATGGAATTGATTTGGGTGCTTTTATTGGAGCCTAATGACTTTTTTCTGTAATACGGCTCATGTGGAAGTGTTACGTTATTTTAAAAACTACCTTCATAAATTTGTCATTGTATAGGTTTGACAACAAAGTCCTGTGAAATGGGCAAAGTTCATATTTTTCTGCTTCCATGGCAAGCAATTGGATACTTCTGTGCGCACATTTTCTTTGTTTAATGTTATGTGAGTACTATGCTGTGTATGTTTGAGGGGGTTGGTGTTCTATTTGTGATACATACCATATTTTTTTTATTTGTATCTAATCTTGTTTTATGGTTGATTGGCCTTATGGAAACATCTGATAGGACGTTTGAGGTCGCCTAGCCCCTATATTGGAAATCCACGTGCTTCAATGGGAGGTGTTGGCTATCAGCAGCCCGTTCCGTACAACTACCAACAAGGATATGTATACTCTATGTATGGGTGGGTTATTGCTGGTGTATATATGGCCTATTTAAGCAGTGCTTTTTTCATGTTTATCTGTAGTATTGGTCATAAAAGAAGATGCATGTAGTAGACTTGTTGTATGTTGATAATTCTGGGCTGCAATATTTGGATTGGAAGAAGTTTGTTTTGTTTATGTATGCTTTCCTATGTTTCAGGTGCTTGTGTATCTGCACGTCTAGTTATTCTTTTGTTTTTTTCCCCCGGTCCTTTCTCGATACATATGTATGCATAATGTGTTCCATGGTTTTGAAATACTTGGATGCTTCTTTGCTGAAACTTGTGACTTTCTGGTCCTGGATTCCTGATGCTGTGTTATGGACTTAATAACTTAATATGATTTCATCAGTACTTGCAGGCGTGTCAAATTTGCACCAGGATTAAGGCCTAAATGTATTACATAACAGTAAATATCAGACTTAGCCCCCAACATCGCCTCCCGTATATTACAATAGGAGAATGTCCACCCAAAATTTACAGTTAGCATCTAGAAAGGGCAGCTTTAATCCTTCCTTGTCTCCTCTGTTTAATTGTTAAATGAGAACTCTTCTTAATGTTAGTGATGATTTCTTTGAGGAAATTCTTAGCTACTTAGTGGCTTAGGTATTGATGTACGCTTAACCCTTATTCTGCAGTGGCTGGGGGTCCAATTGGATGTCGGTGCCTATTTTTATTTCTCTTGTTCTTTCTACAATCATTTAATTTTGGAGGATATCTTTGTGACTTTGTGTTCATTTAACTGTACAGGTTTCAGCCATATGGGCCTGAATATCCATACACACAGGTAATCAGCTTTACAGGATGCCTCAGAATAAGATTTTCGGCGAGAGTTTCTTTATAGTTAATGTTTTGTCTAGTCCTTAGTCCTCACTCCAAGTTGCTTTATACAGGGGCTTTACAACCCTTACATGGGTCAGCAGTACCTTCAGCTGTATGGAGTTCCTGGAACACCAGGTGGACCCATGTATCCTTATGGACAACTGGGCCAGTCAGTTCAAGGAGGTGGTTATACACCAATACAGAATTATCCAATGCCAAGCCACCAGATTGTGCAACTTGGTGGTCCTGGTGTTAACGCTATGACAACGGCTTCTATTCCCAGCATTCAGTCACCGTATCATCCAGGCAATTTTCTCCCCGTTAAAAGTAAATTCTTTGTTTTTACTGAACGTGTTTCCTCTGTCTTTCAAACTATTTGTGCTAGCACTGTATGGCTTTGGGTTCTGGATTCTTGGAATTGTTTTAGTGATTATAGGATTCTGATTCCCGTAACATTGTCAGGGCAGTTGGTTGTACTTAAGTCTAGCGTTATGTGATGAAAATATGTTTGCAATTTTGTTTGCATTTAACATAGCAGAAGTATCTTCGTTAGACCTCGACTTTTTAAATATAGTTCTATGGCTTAAAATTTGTGTTCACGGTTGACCAAGTCTGCTAAGAGTTGAGTCCGTGCTAGTCAAATAATCTAAGAGGGTTAAAATTGCAGCTTGGAATAATTTTGGCTGAGGCTTTTCATGCTGAGCCAGTTCTGTTAGATTTGAGTATGAGGTGGGTAAAATATGTGCTGCTTTTATAATATATTTTGCTTTTTGAAACATTGGCTGATTGATCTCATAAGACTTAGAGTAACTGAATTTTGTAACTACTGGTGGTTGGTACTTGTTGTATTATCTCCTCTCTTGGTTTTGGAGGGAGGTGTTGGTAGGGTGGGATTTTCGTAGCTTCTCCGAGATCCCATTTCCTAAGGTGAGTAAGTTGTATCGTCTCTAGTAAACTGGGTTTTCTCTTGCACGTTGCTGGTTGAAAAATAGAAGAGGTGCAAACAGCATTATGAATTTAGTAGTTTGGTATTATCATTTTATTTTCCCCCCTCTTCAAGGCCAGTTAAATGATATATATTTTTGCACAAATTCAACACCTGTTTGTTGACTCTGTTAACACAATATTTTTCTTGATTATGTGGTCAAATTGGAAGCCAGTTTGTTGAGTGTCCTAGTGGGTAAGCATGGTAGAGTAAGTTGACTAGTTAAAAAAACTATGCTGGTTATTGGTGGCTATAACATTTAGTCTAGTGCATGGATTTCTGGAAAATATTTTACCGTGTGCAGAGTTAGAGAGAATAGTCATTACTATAAGAATGCTTGCTTTTTCAGGTGTAGTTTCCCCAGTTCCTGGACAACCTCAATTTATGATCCACGGACATTCTCCTCAGTTCATTCAAGGTGGCAGCTCTGACCAAGCAACTGGGTGAGAAGACTGATTCAGGCGAGAATTGTGGTCAATTATTCATGCTTGGCAGGTTTTATATCAGATTATATACTCCTTCCGTCCCAAAATATAGTGTCCGTTTGACTAAAAACACGGAAATTAAGGAAAAGGATAGCATTGATAATAAAACAATAATTATTTGTATTTTCAAGATAAAGCATATTTTTTAGGTGGCTTTTATGGAGGGAGAAATTAGAGATTAAAGGTGTTTACATAATAAATGGGCCTCAAAAAGACAAAAATCAAGCACATGGGTTGAATAAAAGTCAGAAAATACAATTTTCAAAGTAAAAATTCTAACTTTTTTAGGACAATATTGGAATTACAATTAGTGCATGAGGGTATTATGGGTAAAAATTAATGGTTTGAAATAGAAATAGGCGCATCATTTAGGGACACCATTTTAGGACAACAGGCGCTATATTTTGGGACGGAGGGAGTTGTAAAATTTGCAAATTACTACCTAGCTTGTTAAAAGTTGTCAACTACTACCCAGGTGTTTAGTTATTGTTGTCAATACCTTAGCTCATATTCCGGCCAATTAGTCAACCGTTAATCATACTTTAATTGGCCGAAATATGAGCTAAGTTAGTAATTGACAACCATAACTAAACACCTATGTAGTAATTCACACTTTTAACAAGTTAGGTAGTAATTTGCAAAGTCACTAAAGACCTAGGTAGTAATTTGCAAATCTTCCGATTATATATTGATTAGACTTGCTTGTTGTGTCTACAGTTATCCTTAGTTTGCAGTGGGACCAAGGCAACAGTTCTGCTACTTGAGTGGCGGGCTTCAAATTTAGCCTTGCAATTTATCATTTTGCATTCTAGAGGTACACTTTTATGCATTCAAATTATGTTATCTTTGATTTAAAAGCAAGTCTTTGCCAAGGCGTGAGATGCAGTGACGTGTCCTCGTCAATCCGTTATTGCCTTGAGCAAACTTGCACAGTAATAGGCCATTTTTGCATAAAATAAAATAAAGAACAAGTATTTCCTAAGCTTTTTGTAAAAGAGTGCATTGTGTCTCAATGTTGAGATTTGAAGACCTTTTGATGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCGGACTCGGCCCTGCCCTCTTGTTTTTCTGAACTGCCTCCGGTTTCACTCATCTTTTAATTATACATGGGCAAAGAGGTACTTTTAATCTTTGAATTTACTTTGTAGTTGAATACTTTTGTTACCAACGTTGCAGGTAAAACATAGTCTTGGTCATCAGAGAAGTCAAGTTTCTAATTCGCTCTACAGCGGAGAGGAATTATGGAAGACAACGGTTTGTTCTTCCTGTATCATTCATTGATGCATCTTAAAACCTTACATTGTGGTCAGTGCTATCCTCAACAAGAACAAGCTGCCCACATAATGCATTTAAGTTGCTGGAAAAGGTATCCAGTGGCCGTGTAAAAATAAAAAAGTATCATGTACAAAAAGTACGAATCCATCTTAGAATCAACATATGATTCTTGTGTAGTATTATAGTCTAGTCGCTCCCGGCCAATCAATCTGGGTTGTATAGAATATCTCTGATGGTCAGTTCATTTACAGGCATGCATGCATCTAGTGTCATCTGTAGGTATCATCCACGTCCTGTGCATATACTCTAGCTTCTAGCCATTTCATTTTCGGTATAACATCTGTCACATAGTATGTATACATGAATGTATAATGTTGGTAGCCCGATTTCAAAATATGAAAGACGGTGAAGACCATTTTCAATAGTCTCAATTTAAGTAGCAGCTTTGTATCTAAATGTGCAATTTGGCCATTAGGTTCAATTTAGAAATTGTACAAGTGTATTTCGGTCTTCTTTAAACGAATTGCAGAGCAACAGTCGGTTTTGGAGGAGCAAGATTATCTTGCCTTCCACAAGTCAGAATTTCTCCTGCCT

mRNA sequence

TTACTTTTCTCTGTATATCCTGTAAATTTCGAACTCATTTCTTCGCCAACTTCTCGTTATGATCTTCGTCTCCAATTCTCTCTCTTTTGACTTTGTTTGACTCCATTTTTAGGGTTTTCTTTATTCTCCCCCTGTCCCATCTCTTCTTAAGAAGAAGTATTATTCTTTTTTCTCTTTAATAATTCAAATTTCTCCTTTTTCTGTCTCCTCTAATTATTAAAAGTCGTCTACTTTTTATCAATAAAGGTTTTTGATTTTGATTTTGATTTTGATTCATCCTCTTAAAAATCCACCTTATGCTCTGATTGGTCGATTTCTAGGGTTTTTCTAGGGTTTTGTTGTTGTTGTTCTTCTTCTTATATACTGCTGTCTTCCTTCATTTTTCAACCTTTAATTTCTCTCTTTTTTTTAATTTTAATTAAAAAAACTGTATTATTTGGGTGAAAGTTCTCTAAATTGGGTTTGTTCTGGTGATCAATCAATTGAATTGATGGCGTATCAGCCGAGTCCGGGTCGACCCGGATCGGGATCTAGCTCGGGTTCGGGGTTTCCGTATTTGAATTCGCCGTTCGGAGACACCACCTATACCAAGGTGTTTGTTGGAGGTCTGGCTTGGGAGACTCAAAGCGAGACGATGCGGCGGTATTTCGAGCATTTTGGTGAGATTCTTGAGGCTGTTGTTATCACTGATAAGAATACTGGTCGCTCCAAGGGCTATGGTTTTGTGACTTTTCGGGATCCTGAATCTGCAAGGAGAGCTTGTGCTGATCCAACACCAATAATTGATGGACGGCGTGCTAATTGTAATTTAGCTTCACTCGGACGACCTCGGCCTGCTCTTTCGTTTGGACGTTTGAGGTCGCCTAGCCCCTATATTGGAAATCCACGTGCTTCAATGGGAGGTGTTGGCTATCAGCAGCCCGTTCCGTACAACTACCAACAAGGATATGTATACTCTATGTATGGGTTTCAGCCATATGGGCCTGAATATCCATACACACAGGGGCTTTACAACCCTTACATGGGTCAGCAGTACCTTCAGCTGTATGGAGTTCCTGGAACACCAGGTGGACCCATGTATCCTTATGGACAACTGGGCCAGTCAGTTCAAGGAGGTGGTTATACACCAATACAGAATTATCCAATGCCAAGCCACCAGATTGTGCAACTTGGTGGTCCTGGTGTTAACGCTATGACAACGGCTTCTATTCCCAGCATTCAGTCACCGTATCATCCAGGTGTAGTTTCCCCAGTTCCTGGACAACCTCAATTTATGATCCACGGACATTCTCCTCAGTTCATTCAAGGTGGCAGCTCTGACCAAGCAACTGGGTGAGAAGACTGATTCAGTTATCCTTAGTTTGCAGTGGGACCAAGGCAACAGTTCTGCTACTTGAGTGGCGGGCTTCAAATTTAGCCTTGCAATTTATCATTTTGCATTCTAGAGGTAAAACATAGTCTTGGTCATCAGAGAAGTCAAGTTTCTAATTCGCTCTACAGCGGAGAGGAATTATGGAAGACAACGGTTTGTTCTTCCTGTATCATTCATTGATGCATCTTAAAACCTTACATTGTGGTCAGTGCTATCCTCAACAAGAACAAGCTGCCCACATAATGCATTTAAGTTGCTGGAAAAGGTATCCAGTGGCCGTGTAAAAATAAAAAAGTATCATGTACAAAAAGTACGAATCCATCTTAGAATCAACATATGATTCTTGTGTAGTATTATAGTCTAGTCGCTCCCGGCCAATCAATCTGGGTTGTATAGAATATCTCTGATGGTCAGTTCATTTACAGGCATGCATGCATCTAGTGTCATCTGTAGGTATCATCCACGTCCTGTGCATATACTCTAGCTTCTAGCCATTTCATTTTCGGTATAACATCTGTCACATAGTATGTATACATGAATGTATAATGTTGGTAGCCCGATTTCAAAATATGAAAGACGGTGAAGACCATTTTCAATAGTCTCAATTTAAGTAGCAGCTTTGTATCTAAATGTGCAATTTGGCCATTAGGTTCAATTTAGAAATTGTACAAGTGTATTTCGGTCTTCTTTAAACGAATTGCAGAGCAACAGTCGGTTTTGGAGGAGCAAGATTATCTTGCCTTCCACAAGTCAGAATTTCTCCTGCCT

Coding sequence (CDS)

ATGGCGTATCAGCCGAGTCCGGGTCGACCCGGATCGGGATCTAGCTCGGGTTCGGGGTTTCCGTATTTGAATTCGCCGTTCGGAGACACCACCTATACCAAGGTGTTTGTTGGAGGTCTGGCTTGGGAGACTCAAAGCGAGACGATGCGGCGGTATTTCGAGCATTTTGGTGAGATTCTTGAGGCTGTTGTTATCACTGATAAGAATACTGGTCGCTCCAAGGGCTATGGTTTTGTGACTTTTCGGGATCCTGAATCTGCAAGGAGAGCTTGTGCTGATCCAACACCAATAATTGATGGACGGCGTGCTAATTGTAATTTAGCTTCACTCGGACGACCTCGGCCTGCTCTTTCGTTTGGACGTTTGAGGTCGCCTAGCCCCTATATTGGAAATCCACGTGCTTCAATGGGAGGTGTTGGCTATCAGCAGCCCGTTCCGTACAACTACCAACAAGGATATGTATACTCTATGTATGGGTTTCAGCCATATGGGCCTGAATATCCATACACACAGGGGCTTTACAACCCTTACATGGGTCAGCAGTACCTTCAGCTGTATGGAGTTCCTGGAACACCAGGTGGACCCATGTATCCTTATGGACAACTGGGCCAGTCAGTTCAAGGAGGTGGTTATACACCAATACAGAATTATCCAATGCCAAGCCACCAGATTGTGCAACTTGGTGGTCCTGGTGTTAACGCTATGACAACGGCTTCTATTCCCAGCATTCAGTCACCGTATCATCCAGGTGTAGTTTCCCCAGTTCCTGGACAACCTCAATTTATGATCCACGGACATTCTCCTCAGTTCATTCAAGGTGGCAGCTCTGACCAAGCAACTGGGTGA

Protein sequence

MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFGRLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASIPSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00346.1	Spo00346.1	mRNA

Homology

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|902176143|gb|KNA08726.1| (hypothetical protein SOVF_160090 isoform C [Spinacia oleracea])

HSP 1 Score: 583.2 bits (1502), Expect = 2.500e-163
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG
Sbjct: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 281

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|902176142|gb|KNA08725.1| (hypothetical protein SOVF_160090 isoform B [Spinacia oleracea])

HSP 1 Score: 576.2 bits (1484), Expect = 3.000e-161
Identity = 281/288 (97.57%), Postives = 281/288 (97.57%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPG-------VVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPG       VVSPVPGQPQFMIHGHSPQFIQGGSSDQATG
Sbjct: 241 PSIQSPYHPGNFLPVKSVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 288

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|902176141|gb|KNA08724.1| (hypothetical protein SOVF_160090 isoform A [Spinacia oleracea])

HSP 1 Score: 521.9 bits (1343), Expect = 6.800e-145
Identity = 252/255 (98.82%), Postives = 252/255 (98.82%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPV 256
           PSIQSPYHPG   PV
Sbjct: 241 PSIQSPYHPGNFLPV 255

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|731314434|ref|XP_010686584.1| (PREDICTED: RNA-binding protein 24 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 519.2 bits (1336), Expect = 4.400e-144
Identity = 250/281 (88.97%), Postives = 261/281 (92.88%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQP PGRPGSGSSSGSGFPYLNS FGDTTYTKVFVGGLAWETQSETMRRYFE FGEIL
Sbjct: 1   MAYQPVPGRPGSGSSSGSGFPYLNSQFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIG PRASMGGVGYQQPV YNYQQGYVYSMYG+QPYGP+Y Y QG+YNPY+GQ
Sbjct: 121 RLRSPSPYIGQPRASMGGVGYQQPVSYNYQQGYVYSMYGYQPYGPDYAYAQGVYNPYLGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPG P+YPYGQ GQS QGGGYTP+QNY MPSHQI+  GGPGVNAMT+  I
Sbjct: 181 QYLQLYGVPGTPGAPVYPYGQFGQSGQGGGYTPMQNYSMPSHQILHFGGPGVNAMTSP-I 240

Query: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPGVVSP+ GQPQFM+ GHSPQFIQGG SDQ  G
Sbjct: 241 PSIQSPYHPGVVSPISGQPQFMVPGHSPQFIQGGGSDQVNG 280

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|902176144|gb|KNA08727.1| (hypothetical protein SOVF_160090 isoform D [Spinacia oleracea])

HSP 1 Score: 512.7 bits (1319), Expect = 4.100e-142
Identity = 250/255 (98.04%), Postives = 250/255 (98.04%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSM  FQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSM--FQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPV 256
           PSIQSPYHPG   PV
Sbjct: 241 PSIQSPYHPGNFLPV 253

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQC6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_160090 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 1.700e-163
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG
Sbjct: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 281

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNA9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_160090 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 2.100e-161
Identity = 281/288 (97.57%), Postives = 281/288 (97.57%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPG-------VVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPG       VVSPVPGQPQFMIHGHSPQFIQGGSSDQATG
Sbjct: 241 PSIQSPYHPGNFLPVKSVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 288

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QN92_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_160090 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 4.700e-145
Identity = 252/255 (98.82%), Postives = 252/255 (98.82%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPV 256
           PSIQSPYHPG   PV
Sbjct: 241 PSIQSPYHPGNFLPV 255

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZF1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g013920 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 3.100e-144
Identity = 250/281 (88.97%), Postives = 261/281 (92.88%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQP PGRPGSGSSSGSGFPYLNS FGDTTYTKVFVGGLAWETQSETMRRYFE FGEIL
Sbjct: 1   MAYQPVPGRPGSGSSSGSGFPYLNSQFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIG PRASMGGVGYQQPV YNYQQGYVYSMYG+QPYGP+Y Y QG+YNPY+GQ
Sbjct: 121 RLRSPSPYIGQPRASMGGVGYQQPVSYNYQQGYVYSMYGYQPYGPDYAYAQGVYNPYLGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPG P+YPYGQ GQS QGGGYTP+QNY MPSHQI+  GGPGVNAMT+  I
Sbjct: 181 QYLQLYGVPGTPGAPVYPYGQFGQSGQGGGYTPMQNYSMPSHQILHFGGPGVNAMTSP-I 240

Query: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPGVVSP+ GQPQFM+ GHSPQFIQGG SDQ  G
Sbjct: 241 PSIQSPYHPGVVSPISGQPQFMVPGHSPQFIQGGGSDQVNG 280

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNB0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_160090 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 2.900e-142
Identity = 250/255 (98.04%), Postives = 250/255 (98.04%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSM  FQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSM--FQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPV 256
           PSIQSPYHPG   PV
Sbjct: 241 PSIQSPYHPGNFLPV 253

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: ARP1_ARATH (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.700e-29
Identity = 96/251 (38.25%), Postives = 122/251 (48.61%), Query Frame = 1

		  
Query: 23  LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFR 82
           +N  FGDT  TKVFVGGLAW+T  E M  +F  +G+ILEAV+I+DK T RSKGYGFVTF+
Sbjct: 7   VNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFK 66

Query: 83  DPESARRACADPTPIIDGRRANCNLASLGRPRPALSFGRLRSPSPYIGNPRASMGGVGYQ 142
           D ++A RAC D TPII+GRRANCNLASLG        GRLR         +    G    
Sbjct: 67  DAKAATRACEDSTPIINGRRANCNLASLG--------GRLRKSPTMTSPQQGPKNGNRAT 126

Query: 143 QPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPY--- 202
            P   N+ Q Y  S +  Q +  +              Q +  YG P     P   +   
Sbjct: 127 PPHVGNHSQWYYPSGFTNQQHQQQ------------NHQAVPFYGYPSAYVAPNMTFNQK 186

Query: 203 -GQLGQSVQGGGYTPI----QNYPMPSHQIVQLGGPGVNAMTTASIPSIQ----SPYHPG 262
            G +G +   G Y  +    Q+ P P +    + G G   M  A+ P +      PYH  
Sbjct: 187 VGYVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMYGGG-RVMVGAASPMVPFYTVYPYHQS 235

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-a PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.800e-28
Identity = 86/220 (39.09%), Postives = 104/220 (47.27%), Query Frame = 1

		  
Query: 29  DTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 88
           DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 89  RACADPTPIIDGRRANCNLASLG-RPR---PALSFGRLRSPSPYIGNPRASMGGVGYQQP 148
           RAC DP PIIDGR+AN NLA LG +PR   P  +FG  +     I  P        +  P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQIHPALIQRP--------FGIP 126

Query: 149 VPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQLGQ 208
             Y Y Q YV          P    +   Y  Y    Y Q            YPY     
Sbjct: 127 AHYVYPQAYVQPGVVIPHVQPTAATSTSPYIDYTSAAYAQYSAAAAAAAYDQYPY---AA 186

Query: 209 SVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASIPSIQ 245
           S    GY     Y     Q +    PG  A   A+    Q
Sbjct: 187 SPAATGYVTAAGYGYAVPQPLTAAAPGSAAAAAAAFGQYQ 215

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: RBM24_HUMAN (RNA-binding protein 24 OS=Homo sapiens GN=RBM24 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.400e-27
Identity = 90/227 (39.65%), Postives = 108/227 (47.58%), Query Frame = 1

		  
Query: 29  DTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 88
           DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 89  RACADPTPIIDGRRANCNLASLG-RPR---PALSFGRLRSPSPYIGNPRASMGGVGYQQP 148
           RAC DP PIIDGR+AN NLA LG +PR   P  +FG  +     I  P        +  P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRP--------FGIP 126

Query: 149 VPYNYQQGYVYSMYGFQPYGPEYPYTQGL--------YNPYMGQQYLQLYGVPGTPGG-- 208
             Y Y Q +V      QP G   P+ Q          Y  Y G  Y Q            
Sbjct: 127 AHYVYPQAFV------QP-GVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAA 186

Query: 209 --PMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTAS 240
               YPY     S    GY     Y     Q +    PG  A   A+
Sbjct: 187 AYDQYPY---AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAA 215

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: RBM24_DANRE (RNA-binding protein 24 OS=Danio rerio GN=rbm24 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.700e-27
Identity = 85/222 (38.29%), Postives = 103/222 (46.40%), Query Frame = 1

		  
Query: 29  DTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 88
           DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAD 66

Query: 89  RACADPTPIIDGRRANCNLASLG-RPR---PALSFGRLRSPSPYIGNPRASMGGVGYQQP 148
           RAC DP PIIDGR+AN NLA LG +PR   P  +FG  +    +I  P        Y  P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRVMQPGFTFGVPQIHPAFIQRP--------YGIP 126

Query: 149 VPYNYQQGYVYSMYGFQPYGP--EYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQL 208
             Y Y Q ++          P          Y  Y G  Y Q            Y     
Sbjct: 127 THYVYPQAFMQPSVVIPHIQPTATSATASSPYIDYTGAAYAQYASAATAAAAAAYEQYPY 186

Query: 209 GQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASIPSIQ 245
             S    GY     Y     Q +    PG  A   A+    Q
Sbjct: 187 AASPAATGYVAAAGYGYAMQQPLATAAPGSAAAAAAAFGQYQ 220

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.700e-27
Identity = 86/220 (39.09%), Postives = 104/220 (47.27%), Query Frame = 1

		  
Query: 29  DTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 88
           DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 89  RACADPTPIIDGRRANCNLASLG-RPR---PALSFGRLRSPSPYIGNPRASMGGVGYQQP 148
           RAC DP PIIDGR+AN NLA LG +PR   P  +FG  +     +  P        Y  P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQIHPALVQRP--------YGIP 126

Query: 149 VPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQLGQ 208
             Y Y Q YV               +   Y  Y    Y Q Y          YPY     
Sbjct: 127 AHYVYPQAYVQQGLVIPHVQQTAAASTSPYIDYTSAAYAQ-YAAAAAAAYDQYPY---AA 186

Query: 209 SVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASIPSIQ 245
           S    GY     Y     Q +    PG  A   A+    Q
Sbjct: 187 SPATTGYVTAAGYGYAVPQPLTAATPGTAAAAAAAFAQYQ 214

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT1G76460.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 364.4 bits (934), Expect = 6.400e-101
Identity = 193/294 (65.65%), Postives = 222/294 (75.51%), Query Frame = 1

		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQP PG         SGF YLNSPFGDTT+TKVFVGGLAWETQSET+R++FE +GEIL
Sbjct: 1   MAYQPVPG---------SGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSF- 120
           EAVVI DKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGRRANCNLASLGRPRP L + 
Sbjct: 61  EAVVIADKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPYA 120

Query: 121 ------GRLRSPSPYIGN---PRASM-GGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPY 180
                 GRLR  SPYIGN   PR S+ G   YQQP+PYNYQQG VY  YG   YGPEY Y
Sbjct: 121 VIPNMPGRLRPASPYIGNVQGPRGSLIGNYPYQQPLPYNYQQGVVYP-YGVTAYGPEYMY 180

Query: 181 --TQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQLGQSVQGG-GYTPIQNYPMPSHQIVQ 240
             +QGLY+PYMGQQYLQ+YGVPG    P+Y YGQL Q++  G GYT +Q Y +P   I+Q
Sbjct: 181 SQSQGLYSPYMGQQYLQVYGVPGAVNSPVYQYGQLSQTIPNGHGYTAVQGYSVPGSHILQ 240

Query: 241 LGGPGVNAMTTASIPSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQAT 281
           LGGP V+ MTT+S+P++Q+PY  G+  P P Q   ++  HSPQF+Q  +SDQ T
Sbjct: 241 LGGPTVSTMTTSSMPALQAPYPSGIPGPAPVQSHIIV--HSPQFMQSTASDQTT 282

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT1G20880.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 305.4 bits (781), Expect = 3.500e-83
Identity = 171/284 (60.21%), Postives = 195/284 (68.66%), Query Frame = 1

		  
Query: 14  SSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRS 73
           S   SGF YLNSPFGDTT+TKVFVGGLAWETQSET+RR+F+ +G+ILEAVVITDKNTGRS
Sbjct: 5   SIPSSGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRS 64

Query: 74  KGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSF-------GRLRSPS 133
           KGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR RP + +       GR+R PS
Sbjct: 65  KGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQYAVIPHAPGRVRPPS 124

Query: 134 PYIG---NPRA-SMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPY--TQGLYNPYMGQ 193
           PY+G   +PR    G   Y QP  YNYQQG VY  YG  PYGP+Y Y  +QG Y PYMGQ
Sbjct: 125 PYVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVYP-YGVTPYGPDYMYSQSQGFYGPYMGQ 184

Query: 194 QYLQLYGVPGTPGGPMYPYGQLGQSVQGG-GYTPIQNYPMPSHQIVQLGGPGVNAMTTAS 253
           QYLQ+YGVPG    P Y YGQL  ++ G  GYT  Q Y  P   ++QLG        T+ 
Sbjct: 185 QYLQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSHPGSHVLQLG-------ATSP 244

Query: 254 IPSIQSPYHPGVVSPVPGQP--QFMIHGHSPQFIQGGSSDQATG 282
           + +IQSPY      P P  P  Q +I    PQ+IQ   SDQ TG
Sbjct: 245 MSAIQSPY------PSPSAPTHQRVIVQTPPQYIQSSGSDQTTG 274

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT1G78260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 179.1 bits (453), Expect = 3.800e-45
Identity = 99/186 (53.23%), Postives = 119/186 (63.98%), Query Frame = 1

		  
Query: 22  YLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTF 81
           Y  SPFGDTTYTKVFVGGLAWET ++ MRRYFE FGEILEAV+ITDKNTG+SKGYGFVTF
Sbjct: 6   YYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTF 65

Query: 82  RDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFGRLRSPSPYIGNPRASMGGVGY 141
           R+ +SA RA ADP P+IDGR+ANCN+AS GRPRP+   GR ++ SP            G 
Sbjct: 66  RESDSATRAVADPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPSTYTGM 125

Query: 142 QQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMG-----QQYLQLYG----VPGTP 199
             P+P       +Y  YG+     ++ Y Q LYN  +      QQ  QLYG     P + 
Sbjct: 126 AAPLPPAAAPQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGATSPSSS 185

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT1G22330.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 178.3 bits (451), Expect = 6.500e-45
Identity = 120/265 (45.28%), Postives = 146/265 (55.09%), Query Frame = 1

		  
Query: 18  SGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYG 77
           S   Y  SPFGDTT+TKVFVGGLAWET ++ MRRYF+ FGEILEAV+ITDK TG+SKGYG
Sbjct: 2   SNTSYYRSPFGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYG 61

Query: 78  FVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFGRLR--SPSPYIGNPRAS 137
           FVTFRD +SA RA ADP P+IDGR+ANCN+AS GRPRP+   GR +  SPS Y G  ++S
Sbjct: 62  FVTFRDSDSATRAVADPNPVIDGRKANCNIASFGRPRPSTPRGRGQGGSPSQYQGGGQSS 121

Query: 138 MGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ-QYL--QLYG----- 197
             G+    PV        +Y  YG+  Y  EY Y Q LYN  + Q QY   Q+YG     
Sbjct: 122 YTGMA--APVQQAAAAQLMYPSYGY-TYNSEYGYHQALYNAQLQQAQYYQQQMYGGGGAT 181

Query: 198 VPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQ--------------LGGPGVN 257
            P +      PY  L            Q+Y    HQ  Q              +    V 
Sbjct: 182 SPSSSNIMPSPYYYLQAPSPRPYLHHQQHYQYHHHQQQQQQQQQRLPSASSYLIYPSNVE 241

Query: 258 AMTTASIPSIQSPYHPGVVSPVPGQ 259
           A T +++P+ Q P      S  P Q
Sbjct: 242 APTPSNVPTSQGPLSSSTESHAPQQ 263

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT2G46780.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.200e-40
Identity = 117/262 (44.66%), Postives = 140/262 (53.44%), Query Frame = 1

		  
Query: 24  NSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRD 83
           N+   DT  TK+FVGGLAWETQ +TMRRYFE FGEI+EAVVITDKNTGRSKGYGFVTF++
Sbjct: 13  NNNTTDTKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKE 72

Query: 84  PESARRACADPTPIIDGRRANCNLASLG--RPRPALS----FGRLRSPSPYIG----NPR 143
            E+A RAC +  P+IDGRRANCNLA LG  +PRP  S     GR RSP   +G    +P+
Sbjct: 73  AEAAMRACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRHGTGRFRSPGSGVGLVAPSPQ 132

Query: 144 ----ASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNP--YMGQQYLQLYG 203
               +S     +QQ   +  Q  + YS YGF  Y  E  Y    YN   Y GQQ+    G
Sbjct: 133 FRGSSSSSAFVHQQQQQHTAQFPFPYSTYGFSGYSQEGMYPMNYYNHHLYGGQQFSPYMG 192

Query: 204 VP--GTPG-----GPMYP-YGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTAS 262
            P  G+ G      P YP Y     S Q       Q++   S Q      P         
Sbjct: 193 HPSAGSTGMFHGFYPYYPQYNAAQSSNQAQAQVQAQHHQGFSFQYTAPPAP--------- 252

The following BLAST results are available for this feature:

BLAST of Spo00346.1 vs. NCBI nr
BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
BLAST of Spo00346.1 vs. TAIR (Arabidopsis)

BLAST of Spo00346.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902176143\|gb\|KNA08726.1\|	2.5e-163	100.	hypothetical protein SOVF_1600...	[more]
gi\|902176142\|gb\|KNA08725.1\|	3.0e-161	97.5	hypothetical protein SOVF_1600...	[more]
gi\|902176141\|gb\|KNA08724.1\|	6.8e-145	98.8	hypothetical protein SOVF_1600...	[more]
gi\|731314434\|ref\|XP_010686584.1\|	4.4e-144	88.9	PREDICTED: RNA-binding protein...	[more]
gi\|902176144\|gb\|KNA08727.1\|	4.1e-142	98.0	hypothetical protein SOVF_1600...	[more]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QQC6_SPIOL	1.7e-163	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QNA9_SPIOL	2.1e-161	97.5	Uncharacterized protein OS=Spi...	[more]
A0A0K9QN92_SPIOL	4.7e-145	98.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8CZF1_BETVU	3.1e-144	88.9	Uncharacterized protein OS=Bet...	[more]
A0A0K9QNB0_SPIOL	2.9e-142	98.0	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
ARP1_ARATH	2.7e-29	38.2	Probable RNA-binding protein A...	[more]
RB24A_XENLA	6.8e-28	39.0	RNA-binding protein 24-A OS=Xe...	[more]
RBM24_HUMAN	3.4e-27	39.6	RNA-binding protein 24 OS=Homo...	[more]
RBM24_DANRE	5.7e-27	38.2	RNA-binding protein 24 OS=Dani...	[more]
RB24B_XENLA	5.7e-27	39.0	RNA-binding protein 24-B OS=Xe...	[more]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT1G76460.1	6.4e-101	65.6	RNA-binding (RRM/RBD/RNP motif...	[more]
AT1G20880.1	3.5e-83	60.2	RNA-binding (RRM/RBD/RNP motif...	[more]
AT1G78260.1	3.8e-45	53.2	RNA-binding (RRM/RBD/RNP motif...	[more]
AT1G22330.1	6.5e-45	45.2	RNA-binding (RRM/RBD/RNP motif...	[more]
AT2G46780.1	2.2e-40	44.6	RNA-binding (RRM/RBD/RNP motif...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 35..91 score: 4.2
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 34..106 score: 1.0
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 33..110 score: 16
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 24..110 score: 3.0
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 22..133 score: 3.12
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 22..114 score: 1.4E-41coord: 254..261 score: 1.4
None	No IPR available	PANTHER	PTHR24012:SF421	SUBFAMILY NOT NAMED	coord: 254..261 score: 1.4E-41coord: 22..114 score: 1.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0007389	pattern specification process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0048767	root hair elongation
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0008361	regulation of cell size
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0009932	cell tip growth
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0048653	anther development
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004674	protein serine/threonine kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo23664	0.75	Barchart \| Table
Spo12340	0.74	Barchart \| Table
Spo26738	0.73	Barchart \| Table
Spo10427	0.73	Barchart \| Table
Spo12162	0.72	Barchart \| Table
Spo04865	0.72	Barchart \| Table
Spo26806	0.72	Barchart \| Table
Spo27004	0.72	Barchart \| Table
Spo12155	0.72	Barchart \| Table
Spo18451	0.72	Barchart \| Table
Spo10652	0.71	Barchart \| Table
Spo03662	0.71	Barchart \| Table
Spo03716	0.71	Barchart \| Table
Spo05127	0.71	Barchart \| Table
Spo05405	0.71	Barchart \| Table
Spo07426	0.71	Barchart \| Table
Spo17959	0.71	Barchart \| Table
Spo09351	0.71	Barchart \| Table
Spo10673	0.70	Barchart \| Table
Spo25763	0.70	Barchart \| Table
Spo11918	0.70	Barchart \| Table
Spo19635	0.70	Barchart \| Table
Spo12156	0.70	Barchart \| Table
Spo15424	0.70	Barchart \| Table
Spo23346	0.70	Barchart \| Table
Spo19518	0.69	Barchart \| Table
Spo11296	0.69	Barchart \| Table
Spo06681	0.69	Barchart \| Table
Spo26833	0.69	Barchart \| Table
Spo02107	0.69	Barchart \| Table
Spo01840	0.69	Barchart \| Table
Spo26190	0.69	Barchart \| Table
Spo25613	0.69	Barchart \| Table
Spo23751	0.69	Barchart \| Table
Spo02606	0.69	Barchart \| Table
Spo23589	0.69	Barchart \| Table
Spo14424	0.69	Barchart \| Table
Spo21351	0.69	Barchart \| Table
Spo04985	0.69	Barchart \| Table
Spo21132	0.69	Barchart \| Table
Spo12368	0.69	Barchart \| Table
Spo20704	0.69	Barchart \| Table
Spo20045	0.69	Barchart \| Table
Spo00249	0.68	Barchart \| Table
Spo00535	0.68	Barchart \| Table
Spo01841	0.68	Barchart \| Table
Spo02444	0.68	Barchart \| Table
Spo06464	0.68	Barchart \| Table
Spo07974	0.68	Barchart \| Table
Spo08546	0.68	Barchart \| Table
Spo09123	0.68	Barchart \| Table
Spo09622	0.68	Barchart \| Table
Spo10222	0.68	Barchart \| Table
Spo10329	0.68	Barchart \| Table
Spo10994	0.68	Barchart \| Table
Spo11243	0.68	Barchart \| Table
Spo11266	0.68	Barchart \| Table
Spo14008	0.68	Barchart \| Table
Spo17032	0.68	Barchart \| Table
Spo19245	0.68	Barchart \| Table
Spo22894	0.68	Barchart \| Table
Spo23614	0.68	Barchart \| Table
Spo24092	0.68	Barchart \| Table
Spo02960	0.67	Barchart \| Table
Spo08540	0.67	Barchart \| Table
Spo16759	0.67	Barchart \| Table
Spo01184	0.67	Barchart \| Table
Spo07586	0.67	Barchart \| Table
Spo07305	0.67	Barchart \| Table
Spo05928	0.67	Barchart \| Table
Spo04885	0.67	Barchart \| Table
Spo27352	0.67	Barchart \| Table
Spo22906	0.67	Barchart \| Table
Spo04448	0.67	Barchart \| Table
Spo23355	0.67	Barchart \| Table
Spo27362	0.67	Barchart \| Table
Spo02984	0.67	Barchart \| Table
Spo23727	0.67	Barchart \| Table
Spo30023	0.67	Barchart \| Table
Spo24980	0.67	Barchart \| Table
Spo10966	0.67	Barchart \| Table
Spo09993	0.67	Barchart \| Table
Spo05557	0.66	Barchart \| Table
Spo23611	0.66	Barchart \| Table
Spo05515	0.66	Barchart \| Table
Spo20900	0.66	Barchart \| Table
Spo20909	0.66	Barchart \| Table
Spo19089	0.66	Barchart \| Table
Spo25037	0.66	Barchart \| Table
Spo21493	0.66	Barchart \| Table
Spo00570	0.66	Barchart \| Table
Spo09452	0.66	Barchart \| Table
Spo08850	0.66	Barchart \| Table
Spo23794	0.66	Barchart \| Table
Spo12623	0.66	Barchart \| Table
Spo22626	0.66	Barchart \| Table
Spo13579	0.66	Barchart \| Table
Spo26814	0.66	Barchart \| Table
Spo22747	0.66	Barchart \| Table
Spo08539	0.66	Barchart \| Table
Spo22818	0.66	Barchart \| Table
Spo15270	0.66	Barchart \| Table
Spo24752	0.66	Barchart \| Table
Spo08528	0.66	Barchart \| Table
Spo15865	0.66	Barchart \| Table
Spo16076	0.66	Barchart \| Table
Spo16082	0.66	Barchart \| Table
Spo10066	0.66	Barchart \| Table
Spo19751	0.66	Barchart \| Table
Spo01540	0.66	Barchart \| Table
Spo23507	0.66	Barchart \| Table
Spo24309	0.66	Barchart \| Table
Spo23617	0.65	Barchart \| Table
Spo24890	0.65	Barchart \| Table
Spo18691	0.65	Barchart \| Table
Spo06041	0.65	Barchart \| Table
Spo19896	0.65	Barchart \| Table
Spo19965	0.65	Barchart \| Table
Spo05093	0.65	Barchart \| Table
Spo22442	0.65	Barchart \| Table
Spo02818	0.65	Barchart \| Table
Spo02731	0.65	Barchart \| Table
Spo10671	0.65	Barchart \| Table
Spo10156	0.65	Barchart \| Table
Spo03983	0.65	Barchart \| Table
Spo23608	0.65	Barchart \| Table
Spo11554	0.65	Barchart \| Table
Spo16161	0.65	Barchart \| Table
Spo02672	0.65	Barchart \| Table
Spo02484	0.65	Barchart \| Table
Spo11919	0.65	Barchart \| Table
Spo09949	0.65	Barchart \| Table
Spo09754	0.65	Barchart \| Table
Spo12663	0.65	Barchart \| Table
Spo14275	0.65	Barchart \| Table
Spo14777	0.65	Barchart \| Table
Spo15395	0.65	Barchart \| Table