Spo00380 (gene)

Overview
NameSpo00380
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPRA1 (Prenylated RAB acceptor) family protein
Locationchr1 : 25578169 .. 25578816 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGTCGGCGACACTTCCGATGACCACCCAACAAACCACCACCAATGACAACACCACAATCACAACTCCAGCTTTCCGCAGCTTCATCTCCCGGCTAACCACCTCCCTCCGCCAAACCTTTGCCCAACGCCGCCCTTGGTACGAACTACTCGATCGCTCCGCCTTCACCCGCCCTGAAAATCTCTCCGATGCCTTCTCACGCATCCGTAAAAATGCCGCTTACTTCCGCGTTAACTACCTCTCACTCCTCGCTGCAGTCCTCGCTTTCTCACTCATCTCCCACCCTTTCTCTCTCATAGTCCTCCTCTCTCTCCTCGCTGCCTGGTGCTTCCTCTATCTCTTCCGCCCTTCCGATCAGCCTGCCATCCTCTTTGGTCGCACCTTCTCCGATCGTGAGATGCTTGGAATCCTCGTCATTTGCACCGTCGTTGTAATCTTCTTGACGAGTGTCGGGTCGTTGTTGATTTCCGCTGCTTTGATTGGGGTTGGGATTGTCTCTGTTCATGGAGCTTTTAGGGTTCCTGAAGATCTGTTCTTAGATGATCAGGAAGGTCCCAATTCTGGGTTATTGTCGTTCCTCGGTGGTACTGCTTCCTCTGCCGCCGTCGCCGCTGCGGGATCCGCTGTTGCTGGAAGAGTCTGA

mRNA sequence

ATGTCGTCGTCGGCGACACTTCCGATGACCACCCAACAAACCACCACCAATGACAACACCACAATCACAACTCCAGCTTTCCGCAGCTTCATCTCCCGGCTAACCACCTCCCTCCGCCAAACCTTTGCCCAACGCCGCCCTTGGTACGAACTACTCGATCGCTCCGCCTTCACCCGCCCTGAAAATCTCTCCGATGCCTTCTCACGCATCCGTAAAAATGCCGCTTACTTCCGCGTTAACTACCTCTCACTCCTCGCTGCAGTCCTCGCTTTCTCACTCATCTCCCACCCTTTCTCTCTCATAGTCCTCCTCTCTCTCCTCGCTGCCTGGTGCTTCCTCTATCTCTTCCGCCCTTCCGATCAGCCTGCCATCCTCTTTGGTCGCACCTTCTCCGATCGTGAGATGCTTGGAATCCTCGTCATTTGCACCGTCGTTGTAATCTTCTTGACGAGTGTCGGGTCGTTGTTGATTTCCGCTGCTTTGATTGGGGTTGGGATTGTCTCTGTTCATGGAGCTTTTAGGGTTCCTGAAGATCTGTTCTTAGATGATCAGGAAGGTCCCAATTCTGGGTTATTGTCGTTCCTCGGTGGTACTGCTTCCTCTGCCGCCGTCGCCGCTGCGGGATCCGCTGTTGCTGGAAGAGTCTGA

Coding sequence (CDS)

ATGTCGTCGTCGGCGACACTTCCGATGACCACCCAACAAACCACCACCAATGACAACACCACAATCACAACTCCAGCTTTCCGCAGCTTCATCTCCCGGCTAACCACCTCCCTCCGCCAAACCTTTGCCCAACGCCGCCCTTGGTACGAACTACTCGATCGCTCCGCCTTCACCCGCCCTGAAAATCTCTCCGATGCCTTCTCACGCATCCGTAAAAATGCCGCTTACTTCCGCGTTAACTACCTCTCACTCCTCGCTGCAGTCCTCGCTTTCTCACTCATCTCCCACCCTTTCTCTCTCATAGTCCTCCTCTCTCTCCTCGCTGCCTGGTGCTTCCTCTATCTCTTCCGCCCTTCCGATCAGCCTGCCATCCTCTTTGGTCGCACCTTCTCCGATCGTGAGATGCTTGGAATCCTCGTCATTTGCACCGTCGTTGTAATCTTCTTGACGAGTGTCGGGTCGTTGTTGATTTCCGCTGCTTTGATTGGGGTTGGGATTGTCTCTGTTCATGGAGCTTTTAGGGTTCCTGAAGATCTGTTCTTAGATGATCAGGAAGGTCCCAATTCTGGGTTATTGTCGTTCCTCGGTGGTACTGCTTCCTCTGCCGCCGTCGCCGCTGCGGGATCCGCTGTTGCTGGAAGAGTCTGA

Protein sequence

MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRPENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSDQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLFLDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00380.1Spo00380.1mRNA


Homology
BLAST of Spo00380.1 vs. NCBI nr
Match: gi|902236070|gb|KNA24191.1| (hypothetical protein SOVF_017470 [Spinacia oleracea])

HSP 1 Score: 389.4 bits (999), Expect = 4.000e-105
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 60
           MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP
Sbjct: 1   MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 60

Query: 61  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 120
           ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD
Sbjct: 61  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 120

Query: 121 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 180
           QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF
Sbjct: 121 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 180

Query: 181 LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV
Sbjct: 181 LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 215

BLAST of Spo00380.1 vs. NCBI nr
Match: gi|731362489|ref|XP_010692914.1| (PREDICTED: PRA1 family protein B3-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 294.7 bits (753), Expect = 1.300e-76
Identity = 162/215 (75.35%), Postives = 186/215 (86.51%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 60
           MSS A LP+      T  +T +TTPAFRSF+SRLTTS R TF+Q RPWYEL+DR+AF+RP
Sbjct: 1   MSSPAILPIND----TTSSTPMTTPAFRSFLSRLTTSARHTFSQARPWYELIDRTAFSRP 60

Query: 61  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 120
           ENL+DA SRIRKNA+YFRVNYL+L++AVLA  LISH FSL+VLLSLLA+WCFLY FRPSD
Sbjct: 61  ENLTDAISRIRKNASYFRVNYLTLISAVLALFLISHIFSLLVLLSLLASWCFLYFFRPSD 120

Query: 121 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 180
           QP +LFGRTFSDREMLGIL + TV+V+FLTSVGSLLISA L G+ +VS HGAFRVPEDLF
Sbjct: 121 QPVLLFGRTFSDREMLGILSLLTVIVVFLTSVGSLLISAVLSGLLVVSAHGAFRVPEDLF 180

Query: 181 LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           LD+QEGPNSGLLSFLGG ASSAAVAAA + V+GRV
Sbjct: 181 LDEQEGPNSGLLSFLGGAASSAAVAAASNNVSGRV 211

BLAST of Spo00380.1 vs. NCBI nr
Match: gi|823237810|ref|XP_012451551.1| (PREDICTED: PRA1 family protein B1-like [Gossypium raimondii])

HSP 1 Score: 278.9 bits (712), Expect = 7.600e-72
Identity = 154/219 (70.32%), Postives = 180/219 (82.19%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTT----ITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSA 60
           M+S AT+PMTT Q+T    T     I TPAFR+F+SR T+S+RQ  +QRRPWYEL+DRSA
Sbjct: 1   MASPATIPMTTSQSTAGGGTQSQPPIATPAFRAFLSRFTSSIRQGLSQRRPWYELIDRSA 60

Query: 61  FTRPENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLF 120
             RP+NL+DA+SRIRKN +YF+VNY++LL  VLAFS++SHP SL+VLL LLAAW FLYLF
Sbjct: 61  MARPDNLTDAYSRIRKNLSYFKVNYITLLVVVLAFSILSHPLSLLVLLGLLAAWVFLYLF 120

Query: 121 RPSDQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVP 180
           RPSDQP ++FGRTFSDRE LG LV+ TV V+FLTSVGSLLISA L+GV IV +HGAFRVP
Sbjct: 121 RPSDQPLVIFGRTFSDRETLGALVVLTVFVVFLTSVGSLLISALLVGVAIVCIHGAFRVP 180

Query: 181 EDLFLDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           EDLFLDDQE  N+G LSFLGG ASSAA AAA  AVA RV
Sbjct: 181 EDLFLDDQEPANTGFLSFLGGAASSAA-AAAAPAVASRV 218

BLAST of Spo00380.1 vs. NCBI nr
Match: gi|823244886|ref|XP_012455115.1| (PREDICTED: PRA1 family protein B3 [Gossypium raimondii])

HSP 1 Score: 278.9 bits (712), Expect = 7.600e-72
Identity = 152/215 (70.70%), Postives = 180/215 (83.72%), Query Frame = 1

		  

Query: 5   ATLPMTTQQTTTNDNTT----ITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 64
           AT+PMT  Q+T          IT PAFR+F+SRLT+S+RQ F+QRRPWYEL+DR+A  RP
Sbjct: 2   ATIPMTNSQSTAGSGPQSQPPITNPAFRTFLSRLTSSIRQGFSQRRPWYELIDRTAMARP 61

Query: 65  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 124
           +NL+DA+SRIR+N +YF+VNY++LLA VLAFSL+SHPFSL+VLL LLAAW FLYLFRPSD
Sbjct: 62  DNLTDAYSRIRRNFSYFKVNYITLLALVLAFSLLSHPFSLLVLLGLLAAWLFLYLFRPSD 121

Query: 125 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 184
           QP ++FGRTFSDRE LGILV+ TV ++FLTS+GSLLISA LIGV IV +HGAFRVPEDLF
Sbjct: 122 QPLVIFGRTFSDRETLGILVVLTVFIVFLTSIGSLLISAILIGVAIVCIHGAFRVPEDLF 181

Query: 185 LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           LDDQ+  NSG LSFLG  ASSAA+AAA  AVA RV
Sbjct: 182 LDDQDPANSGFLSFLGNAASSAAIAAA-PAVASRV 215

BLAST of Spo00380.1 vs. NCBI nr
Match: gi|590561570|ref|XP_007008847.1| (Prenylated RAB acceptor 1.B4 [Theobroma cacao])

HSP 1 Score: 277.3 bits (708), Expect = 2.200e-71
Identity = 155/219 (70.78%), Postives = 180/219 (82.19%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTT----ITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSA 60
           M++ AT+PMT+ Q+T          I TPAFR+F+SRLT+S+RQ  +QRRPWYEL+DRSA
Sbjct: 1   MANPATIPMTSSQSTAGSGAQSQPPIATPAFRAFLSRLTSSIRQGLSQRRPWYELIDRSA 60

Query: 61  FTRPENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLF 120
             RP+NL+DA+SRIRKN +YF+VNY++LL  VLAFSL+SHP SL+VLL LLAAW FLYLF
Sbjct: 61  MARPDNLTDAYSRIRKNLSYFKVNYITLLVVVLAFSLLSHPLSLLVLLGLLAAWVFLYLF 120

Query: 121 RPSDQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVP 180
           RPSDQP +LFGRTFSDRE LG LV+ TV V+FLTSVGSLLISA LIGV IV +HGAFRVP
Sbjct: 121 RPSDQPLVLFGRTFSDRETLGALVVLTVFVVFLTSVGSLLISALLIGVAIVCLHGAFRVP 180

Query: 181 EDLFLDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           EDLFLDDQE  N+G LSFLGG ASSAA AAA  AVA RV
Sbjct: 181 EDLFLDDQEPANTGFLSFLGGAASSAA-AAAAPAVASRV 218

BLAST of Spo00380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXF5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_017470 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 2.800e-105
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 60
           MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP
Sbjct: 1   MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 60

Query: 61  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 120
           ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD
Sbjct: 61  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 120

Query: 121 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 180
           QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF
Sbjct: 121 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 180

Query: 181 LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV
Sbjct: 181 LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 215

BLAST of Spo00380.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BET8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g044550 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 9.400e-77
Identity = 162/215 (75.35%), Postives = 186/215 (86.51%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 60
           MSS A LP+      T  +T +TTPAFRSF+SRLTTS R TF+Q RPWYEL+DR+AF+RP
Sbjct: 1   MSSPAILPIND----TTSSTPMTTPAFRSFLSRLTTSARHTFSQARPWYELIDRTAFSRP 60

Query: 61  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 120
           ENL+DA SRIRKNA+YFRVNYL+L++AVLA  LISH FSL+VLLSLLA+WCFLY FRPSD
Sbjct: 61  ENLTDAISRIRKNASYFRVNYLTLISAVLALFLISHIFSLLVLLSLLASWCFLYFFRPSD 120

Query: 121 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 180
           QP +LFGRTFSDREMLGIL + TV+V+FLTSVGSLLISA L G+ +VS HGAFRVPEDLF
Sbjct: 121 QPVLLFGRTFSDREMLGILSLLTVIVVFLTSVGSLLISAVLSGLLVVSAHGAFRVPEDLF 180

Query: 181 LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           LD+QEGPNSGLLSFLGG ASSAAVAAA + V+GRV
Sbjct: 181 LDEQEGPNSGLLSFLGGAASSAAVAAASNNVSGRV 211

BLAST of Spo00380.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RUB4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G289800 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.300e-72
Identity = 152/215 (70.70%), Postives = 180/215 (83.72%), Query Frame = 1

		  

Query: 5   ATLPMTTQQTTTNDNTT----ITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 64
           AT+PMT  Q+T          IT PAFR+F+SRLT+S+RQ F+QRRPWYEL+DR+A  RP
Sbjct: 2   ATIPMTNSQSTAGSGPQSQPPITNPAFRTFLSRLTSSIRQGFSQRRPWYELIDRTAMARP 61

Query: 65  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 124
           +NL+DA+SRIR+N +YF+VNY++LLA VLAFSL+SHPFSL+VLL LLAAW FLYLFRPSD
Sbjct: 62  DNLTDAYSRIRRNFSYFKVNYITLLALVLAFSLLSHPFSLLVLLGLLAAWLFLYLFRPSD 121

Query: 125 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 184
           QP ++FGRTFSDRE LGILV+ TV ++FLTS+GSLLISA LIGV IV +HGAFRVPEDLF
Sbjct: 122 QPLVIFGRTFSDRETLGILVVLTVFIVFLTSIGSLLISAILIGVAIVCIHGAFRVPEDLF 181

Query: 185 LDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           LDDQ+  NSG LSFLG  ASSAA+AAA  AVA RV
Sbjct: 182 LDDQDPANSGFLSFLGNAASSAAIAAA-PAVASRV 215

BLAST of Spo00380.1 vs. UniProtKB/TrEMBL
Match: A0A0D2UFM7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G193900 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.300e-72
Identity = 154/219 (70.32%), Postives = 180/219 (82.19%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTT----ITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSA 60
           M+S AT+PMTT Q+T    T     I TPAFR+F+SR T+S+RQ  +QRRPWYEL+DRSA
Sbjct: 1   MASPATIPMTTSQSTAGGGTQSQPPIATPAFRAFLSRFTSSIRQGLSQRRPWYELIDRSA 60

Query: 61  FTRPENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLF 120
             RP+NL+DA+SRIRKN +YF+VNY++LL  VLAFS++SHP SL+VLL LLAAW FLYLF
Sbjct: 61  MARPDNLTDAYSRIRKNLSYFKVNYITLLVVVLAFSILSHPLSLLVLLGLLAAWVFLYLF 120

Query: 121 RPSDQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVP 180
           RPSDQP ++FGRTFSDRE LG LV+ TV V+FLTSVGSLLISA L+GV IV +HGAFRVP
Sbjct: 121 RPSDQPLVIFGRTFSDRETLGALVVLTVFVVFLTSVGSLLISALLVGVAIVCIHGAFRVP 180

Query: 181 EDLFLDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           EDLFLDDQE  N+G LSFLGG ASSAA AAA  AVA RV
Sbjct: 181 EDLFLDDQEPANTGFLSFLGGAASSAA-AAAAPAVASRV 218

BLAST of Spo00380.1 vs. UniProtKB/TrEMBL
Match: A0A061FLZ1_THECC (Prenylated RAB acceptor 1.B4 OS=Theobroma cacao GN=TCM_042426 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.500e-71
Identity = 155/219 (70.78%), Postives = 180/219 (82.19%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTT----ITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSA 60
           M++ AT+PMT+ Q+T          I TPAFR+F+SRLT+S+RQ  +QRRPWYEL+DRSA
Sbjct: 1   MANPATIPMTSSQSTAGSGAQSQPPIATPAFRAFLSRLTSSIRQGLSQRRPWYELIDRSA 60

Query: 61  FTRPENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLF 120
             RP+NL+DA+SRIRKN +YF+VNY++LL  VLAFSL+SHP SL+VLL LLAAW FLYLF
Sbjct: 61  MARPDNLTDAYSRIRKNLSYFKVNYITLLVVVLAFSLLSHPLSLLVLLGLLAAWVFLYLF 120

Query: 121 RPSDQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVP 180
           RPSDQP +LFGRTFSDRE LG LV+ TV V+FLTSVGSLLISA LIGV IV +HGAFRVP
Sbjct: 121 RPSDQPLVLFGRTFSDRETLGALVVLTVFVVFLTSVGSLLISALLIGVAIVCLHGAFRVP 180

Query: 181 EDLFLDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           EDLFLDDQE  N+G LSFLGG ASSAA AAA  AVA RV
Sbjct: 181 EDLFLDDQEPANTGFLSFLGGAASSAA-AAAAPAVASRV 218

BLAST of Spo00380.1 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.300e-67
Identity = 138/216 (63.89%), Postives = 177/216 (81.94%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTT-TNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTR 60
           M++  TLP++      +     ++TPAFR+F+SRL++S+RQ+ +QRRPW EL+DRSA +R
Sbjct: 2   MANPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISR 61

Query: 61  PENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPS 120
           PE+L+DA+SRIR+N  YF+VNY+++++ VLA SL+SHPFSL+VLL L  AW FLYLFRPS
Sbjct: 62  PESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPS 121

Query: 121 DQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDL 180
           DQP ++ GRTFSDRE LG+LVI T+VV+FLTSVGSLL SA +IG GIV +HGAFRVPEDL
Sbjct: 122 DQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDL 181

Query: 181 FLDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           FLDDQE  N+GLLSFL G A+SAAVAAA +  +GRV
Sbjct: 182 FLDDQEPANTGLLSFLSGAATSAAVAAASTPASGRV 217

BLAST of Spo00380.1 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.400e-65
Identity = 138/214 (64.49%), Postives = 175/214 (81.78%), Query Frame = 1

		  

Query: 2   SSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRPE 61
           SS A LP+T QQ  T     I + AFR+F+SRL++SLR++ +QRRPW EL+DRS+F RP+
Sbjct: 3   SSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPD 62

Query: 62  NLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSDQ 121
           +L+D+FSRIRKN AYF+VNY ++++ VLAFSL+SHPFSL+VLLSLL +W FLYLFR SDQ
Sbjct: 63  SLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQ 122

Query: 122 PAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLFL 181
           P +LFGR+FSDRE L  LV+ T+VV+F+TSVGSLL SA  IG+ IV +HGAFRVP+DLFL
Sbjct: 123 PLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFL 182

Query: 182 DDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           D+QE  N+GLLSF+G   +SAA +AA S VAGRV
Sbjct: 183 DEQEPANAGLLSFIG---NSAATSAAASVVAGRV 213

BLAST of Spo00380.1 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.000e-64
Identity = 134/208 (64.42%), Postives = 167/208 (80.29%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 60
           M++  TLP+T QQ   +    I TPAFR+F SRL+TS+R   +QRRPW EL+DRS+  RP
Sbjct: 1   MATPPTLPVTNQQAVQSQ-PPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARP 60

Query: 61  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 120
           E+L+DA SRIRKN AYF+VNY+++++ VLAFSL SHP SL+VL+ LL  W FLYLFRPSD
Sbjct: 61  ESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSD 120

Query: 121 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 180
           QP ++FGRTFSDRE L  LV+ T+VV+F+TSVGSLL SA +IGV IV VHGAF VP+DLF
Sbjct: 121 QPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLF 180

Query: 181 LDDQEGPNSGLLSFLGGTASSAAVAAAG 209
           LD+QE  N+GLLSFLGG+A+SAA A +G
Sbjct: 181 LDEQEPANAGLLSFLGGSATSAAAAVSG 207

BLAST of Spo00380.1 vs. ExPASy Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.100e-57
Identity = 123/220 (55.91%), Postives = 164/220 (74.55%), Query Frame = 1

		  

Query: 1   MSSSA--TLPMTTQQT-------TTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYEL 60
           M+SSA   LP++  QT       +      I TPAFR+FI+++T +++   ++RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFTRPENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWC 120
            DRSA ++PE++SDA  RIRKN +YF+VNYL++  A++ FSL++HPFSL+ LL LLA+W 
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHG 180
           FLYLFRP+DQP +LFGRTFSDRE LG L++ ++ VIFLT VGS+L+SA +IGV ++  HG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 AFRVPEDLFLDDQEGPNSGLLSFLGGTASSAAVAAAGSAV 212
           AFR PEDLFLD+QE   +G LSFLGG ASSAA A   + V
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPAVIAARV 220

BLAST of Spo00380.1 vs. ExPASy Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.300e-51
Identity = 112/213 (52.58%), Postives = 155/213 (72.77%), Query Frame = 1

		  

Query: 7   LPMTTQQTTTNDNTTITT-------PAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTR 66
           LP++T  T T +   I T       P  R+F++ +T ++    ++ RPW ELLDRSAFT+
Sbjct: 9   LPISTTATDTTNQPPIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPWSELLDRSAFTK 68

Query: 67  PENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPS 126
           P++LS+A +R RKN++YFRVNY+ ++A +L FSL++HPFSLI+LL L A+W FLYLFRPS
Sbjct: 69  PDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPS 128

Query: 127 DQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDL 186
           D+P ILFGR+FS+ E LG L++ T+ VIF TSVGS+LISA +IG+  + VHGAFR P+DL
Sbjct: 129 DRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPDDL 188

Query: 187 FLDDQEGPNSGLLSFLGGTASSAAVAAAGSAVA 213
           FLD+Q+   SG LSF+G  A  +   +A SA +
Sbjct: 189 FLDEQDHAASGFLSFIGVPAIPSVAPSASSAAS 221

BLAST of Spo00380.1 vs. TAIR (Arabidopsis)
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3)

HSP 1 Score: 256.1 bits (653), Expect = 1.900e-68
Identity = 138/216 (63.89%), Postives = 177/216 (81.94%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTT-TNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTR 60
           M++  TLP++      +     ++TPAFR+F+SRL++S+RQ+ +QRRPW EL+DRSA +R
Sbjct: 2   MANPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISR 61

Query: 61  PENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPS 120
           PE+L+DA+SRIR+N  YF+VNY+++++ VLA SL+SHPFSL+VLL L  AW FLYLFRPS
Sbjct: 62  PESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPS 121

Query: 121 DQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDL 180
           DQP ++ GRTFSDRE LG+LVI T+VV+FLTSVGSLL SA +IG GIV +HGAFRVPEDL
Sbjct: 122 DQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDL 181

Query: 181 FLDDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           FLDDQE  N+GLLSFL G A+SAAVAAA +  +GRV
Sbjct: 182 FLDDQEPANTGLLSFLSGAATSAAVAAASTPASGRV 217

BLAST of Spo00380.1 vs. TAIR (Arabidopsis)
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2)

HSP 1 Score: 250.8 bits (639), Expect = 7.800e-67
Identity = 138/214 (64.49%), Postives = 175/214 (81.78%), Query Frame = 1

		  

Query: 2   SSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRPE 61
           SS A LP+T QQ  T     I + AFR+F+SRL++SLR++ +QRRPW EL+DRS+F RP+
Sbjct: 3   SSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPD 62

Query: 62  NLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSDQ 121
           +L+D+FSRIRKN AYF+VNY ++++ VLAFSL+SHPFSL+VLLSLL +W FLYLFR SDQ
Sbjct: 63  SLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQ 122

Query: 122 PAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLFL 181
           P +LFGR+FSDRE L  LV+ T+VV+F+TSVGSLL SA  IG+ IV +HGAFRVP+DLFL
Sbjct: 123 PLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFL 182

Query: 182 DDQEGPNSGLLSFLGGTASSAAVAAAGSAVAGRV 216
           D+QE  N+GLLSF+G   +SAA +AA S VAGRV
Sbjct: 183 DEQEPANAGLLSFIG---NSAATSAAASVVAGRV 213

BLAST of Spo00380.1 vs. TAIR (Arabidopsis)
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1)

HSP 1 Score: 246.9 bits (629), Expect = 1.100e-65
Identity = 134/208 (64.42%), Postives = 167/208 (80.29%), Query Frame = 1

		  

Query: 1   MSSSATLPMTTQQTTTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTRP 60
           M++  TLP+T QQ   +    I TPAFR+F SRL+TS+R   +QRRPW EL+DRS+  RP
Sbjct: 1   MATPPTLPVTNQQAVQSQ-PPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARP 60

Query: 61  ENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPSD 120
           E+L+DA SRIRKN AYF+VNY+++++ VLAFSL SHP SL+VL+ LL  W FLYLFRPSD
Sbjct: 61  ESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSD 120

Query: 121 QPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDLF 180
           QP ++FGRTFSDRE L  LV+ T+VV+F+TSVGSLL SA +IGV IV VHGAF VP+DLF
Sbjct: 121 QPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLF 180

Query: 181 LDDQEGPNSGLLSFLGGTASSAAVAAAG 209
           LD+QE  N+GLLSFLGG+A+SAA A +G
Sbjct: 181 LDEQEPANAGLLSFLGGSATSAAAAVSG 207

BLAST of Spo00380.1 vs. TAIR (Arabidopsis)
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4)

HSP 1 Score: 223.0 bits (567), Expect = 1.800e-58
Identity = 123/220 (55.91%), Postives = 164/220 (74.55%), Query Frame = 1

		  

Query: 1   MSSSA--TLPMTTQQT-------TTNDNTTITTPAFRSFISRLTTSLRQTFAQRRPWYEL 60
           M+SSA   LP++  QT       +      I TPAFR+FI+++T +++   ++RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFTRPENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWC 120
            DRSA ++PE++SDA  RIRKN +YF+VNYL++  A++ FSL++HPFSL+ LL LLA+W 
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHG 180
           FLYLFRP+DQP +LFGRTFSDRE LG L++ ++ VIFLT VGS+L+SA +IGV ++  HG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 AFRVPEDLFLDDQEGPNSGLLSFLGGTASSAAVAAAGSAV 212
           AFR PEDLFLD+QE   +G LSFLGG ASSAA A   + V
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPAVIAARV 220

BLAST of Spo00380.1 vs. TAIR (Arabidopsis)
Match: AT5G01640.1 (prenylated RAB acceptor 1.B5)

HSP 1 Score: 202.6 bits (514), Expect = 2.400e-52
Identity = 112/213 (52.58%), Postives = 155/213 (72.77%), Query Frame = 1

		  

Query: 7   LPMTTQQTTTNDNTTITT-------PAFRSFISRLTTSLRQTFAQRRPWYELLDRSAFTR 66
           LP++T  T T +   I T       P  R+F++ +T ++    ++ RPW ELLDRSAFT+
Sbjct: 9   LPISTTATDTTNQPPIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPWSELLDRSAFTK 68

Query: 67  PENLSDAFSRIRKNAAYFRVNYLSLLAAVLAFSLISHPFSLIVLLSLLAAWCFLYLFRPS 126
           P++LS+A +R RKN++YFRVNY+ ++A +L FSL++HPFSLI+LL L A+W FLYLFRPS
Sbjct: 69  PDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPS 128

Query: 127 DQPAILFGRTFSDREMLGILVICTVVVIFLTSVGSLLISAALIGVGIVSVHGAFRVPEDL 186
           D+P ILFGR+FS+ E LG L++ T+ VIF TSVGS+LISA +IG+  + VHGAFR P+DL
Sbjct: 129 DRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPDDL 188

Query: 187 FLDDQEGPNSGLLSFLGGTASSAAVAAAGSAVA 213
           FLD+Q+   SG LSF+G  A  +   +A SA +
Sbjct: 189 FLDEQDHAASGFLSFIGVPAIPSVAPSASSAAS 221

The following BLAST results are available for this feature:
BLAST of Spo00380.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902236070|gb|KNA24191.1|4.0e-105100.hypothetical protein SOVF_0174... [more]
gi|731362489|ref|XP_010692914.1|1.3e-7675.3PREDICTED: PRA1 family protein... [more]
gi|823237810|ref|XP_012451551.1|7.6e-7270.3PREDICTED: PRA1 family protein... [more]
gi|823244886|ref|XP_012455115.1|7.6e-7270.7PREDICTED: PRA1 family protein... [more]
gi|590561570|ref|XP_007008847.1|2.2e-7170.7Prenylated RAB acceptor 1.B4 [... [more]
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BLAST of Spo00380.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RXF5_SPIOL2.8e-105100.Uncharacterized protein OS=Spi... [more]
A0A0J8BET8_BETVU9.4e-7775.3Uncharacterized protein OS=Bet... [more]
A0A0D2RUB4_GOSRA5.3e-7270.7Uncharacterized protein OS=Gos... [more]
A0A0D2UFM7_GOSRA5.3e-7270.3Uncharacterized protein OS=Gos... [more]
A0A061FLZ1_THECC1.5e-7170.7Prenylated RAB acceptor 1.B4 O... [more]
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BLAST of Spo00380.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PR1B3_ARATH3.3e-6763.8PRA1 family protein B3 OS=Arab... [more]
PR1B2_ARATH1.4e-6564.4PRA1 family protein B2 OS=Arab... [more]
PR1B1_ARATH2.0e-6464.4PRA1 family protein B1 OS=Arab... [more]
PR1B4_ARATH3.1e-5755.9PRA1 family protein B4 OS=Arab... [more]
PR1B5_ARATH4.3e-5152.5PRA1 family protein B5 OS=Arab... [more]
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BLAST of Spo00380.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G05380.11.9e-6863.8prenylated RAB acceptor 1.B3[more]
AT2G40380.17.8e-6764.4prenylated RAB acceptor 1.B2[more]
AT3G56110.11.1e-6564.4prenylated RAB acceptor 1.B1[more]
AT2G38360.11.8e-5855.9prenylated RAB acceptor 1.B4[more]
AT5G01640.12.4e-5252.5prenylated RAB acceptor 1.B5[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 41..183
score: 4.4
NoneNo IPR availablePANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 2..200
score: 5.5E
NoneNo IPR availablePANTHERPTHR19317:SF9PRA1 FAMILY PROTEIN B1-RELATEDcoord: 2..200
score: 5.5E

RNA-Seq Expression