Spo00453 (gene) | SpinachBase

Overview


Name	Spo00453
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Vacuolar protein sorting 55 family protein
Location	chr2 : 36200723 .. 36215025 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGGAATTGTTCAGATGTTCACAAGTTTTCACTTTTCTCTAGAGTCGACTTGACTTTCCCTTTGTTTATTTATGATCATTTCACTCTGTCAGTCCACAAGAAACCCCAATTCAGAGTCTTTCAAAAGCAATCTGCTTTCCCCTTCTCCACGGTTGGAAATTTAGAATTTCAGGTTGCAAATTTGAATTTGGAATTATAATCTAATCCTCAAATCATGGCGATGACAGTAGAAGGTTCACTTGTTCCTTTTTCTTAATTTTTTTTTGTTTTCTTTCCCCTAAAAGTTCGTATTTGATCATGATTTCTATTTTTCTTTTTGCATAATTATTTCAATTTCTTTATCATATATCCGTTTCTTTTCTGAACTGCATCGTAGGCTAAATCATAATGTTGGAGTTGTAAATTCTTCATAATTTGATTTTAAACAAAGTTAGGGTTTTTGAGAAAATTTTCCTGAATTTTCTTGTTGGAATTGGTAAATTATTTCAATTCATCATTTTGATGATATCCCCACGAAATATTGTGTTTCCAAAATTATGATTTTGACTTATCTTGTTTGTTGTGCTGACTGTTGTTTGTTTGATGCATCGCGGGCTTGCTGTTAATCGATTATTGCTTTCTTCGGCAGTGTAAGCACCGAGAGAACTATTTTGTGTTCGATTTATTTTTATTTTTATTTTGCAAAAAAAGTGGAACTTGTAACTTAGTTTATATAATTTTGCAGGCTCTGTGGGCTTGCATTTACTTTTTCAGTCAGTATCATGTTGCAGATAATGGTATGTCTTCATGATTAGTTTCTCTTTAGATATGTTTCGGCTTTTGACATATAACTTGTGGACGCATTATTCACGACTGTATTTTCTGTCATAAGTGAAATCACTTACTGATTTTGCGTTACCGTTTACACCTAGTTGTGGCTTGTGTGTAATAACTTTTAAGTTTGATGAATACATTTCTGATGTTGTGGTTTCATTTACAATGTGAATTCTTAGCTATCCTAGTTGTGATAGAGAAATCTGATTTCCCCAATTGGGTGGGGAGGGGAGGGGCGAGCTATAACAGCTATTGTTTTCTGCGTTGCAGAACTACATGATTAGTTTCTACGGGGAATACAGATGTATCTAAACAATTATTTATTGTTTTTTCTTGCAACTCAATTGAAATAATGGAAAAGAATACAGAAAGAGAACAGTGTTTGCTACTAGGATTTGGAAGTTGGAGTTTGAGTTATGACACTACTTTTTGTGAGCAAAGGTGTCAAAGAGGGTTAAGTAGGCCACCCGGTGGCGGATCCAGAAGTTTTAACTTGTAGTGCATGTTAACATCAAACTGACAATGTTTCTACTTTTAGAAGTTGTCTCTGTTTTCTGGATATTTCTTTAATTTTGTAGTTCACTATTGAAAGAGAGTTTTTTGGCTTTGAATGCACACGGTTTTGATTAATTCTTGTAATAAATGGGGATGCAATTGCTTCTGATGTGTGTCATATTCGTCCTCCCTTAAGCAACCCTCTTTGTGCTAAAAGAGATTGTTGGTTGTGAGACAGTTACAACAAACAAAACATGGATACAAGAAATTAGAGATGGGGAAGTGTGCAAGGGATGGAGGGATGGAGGGAGGAACACTTTCAAATATGTTGGATGATTGAGAACAAATGAACTCTCGAGGAGGAAGCACAAGAAGAATGAAATTTGGGAACGTTAAGGAGATTGTAGGCATTATTAGCATTTTATTCCCAAGCAATTTCGATATTTAAGGATGGTTCTTGTTGACATATAAGAGAGGATTTGGGATTTGATCCAAGTCCTTTAGTTCAATACGGAAAAAGAGCGAGAGACACCAACAAGAGGTAACTAAGAATTTAAATTTGGAAACAGAAAAGAATGTCAACGATAATTTAGTTAAGTTAGTAAATGTTGAGATTTTATTAAGGAACACTGGAACAGAGTACTTGCTAAAGGAATTCGAGGAGATTTATGATTTCGAGGAGTTATCTGTTGTCCTAGGGAGATTGCTCTTTCAAGGCATGTTTCTGAGGTCTTTAGTTTACTAGTATTTAAAAGGTTTTCCAAATGTTACGTGGCTGGTTTTGGGGGATTTTATATCTTCTGTTCATGTTGGCTATACTGGAAGGAGGGTGATTTTCAGATAATTCTGTCATTGCAAATGAGTTTGTTGAATGTTTGTGATGAGACTCGTGAAAAGTGTGGGTGGGTTCTACTAGTGTTTCAAGCACGTCAAAGCACCGGGTGGACTCATAAATTGATTGTGTCTAGGCAGTTCAAGGTACTTAACGGCACAAGAGACGCTCTTCTTAATTTATTAATTTTTTGGTTCAGATTAAATAAATTGAATCACTATTTCTTAAAGTTGAAATTTGAATTATGATTGTGCACATAGTATTCATTATGCCGACTATTAAATTTCTAGTTGAAATTGAATATACCTTACTTCACCAAGGTGCATGTCGTTGCCGGGTTGGAATAGAATAATAGATAGTTTCATAGGGTTTAGAACCACCTTCTTTTAACCTATTATCAGTGGACACCGAATCTTTATTTGGTGCTATGTTACGAGGTTTTAGACAGAGCGACCCTCTTTTTTCTTTCTTTCTCACTCACCCTTTCTATCAAATCTTTTAGTTGAATCAAGACTTAAAATGTTTAAGGGGGTTTGGTGAAGTGTATTTTGGTTGGAACAACACACATATCGTGCCTTTCTGCCATAACTGTTCCGATGGGGTGAAGTTTTGTTTAGCATACTTGTCTAATTCTTCATGCTTTTGGTAAAGATTGTTTGGGAAGACTTTGGTATCAGGTTGAATATGGTTTGAAGTGGTACTGTTGGGATTATCCTTGGTTTTTGTCATGGATTGAGTGGCAAGCTTGTGGGTTGTGACTTGATCATTAATATTTAATTTCATCAAGAATGTTCTTCCAAATTTCAATTTGGGAAGGACTCTGGAGTTAAAATGAATATGCATCGGTGCGTGGCAGCTTCTGGGGTTCATCTTGACTTTCAAACAAGATTAACATATAACACCTTCTTCAAATAGATTGTTGGAAATTCTTTTTTCTATTTGTTTTCCGTAAGGGAGGTTCTTACCACTTCAATCTTGTCCTTGTCCACTTGAGGTGCTGATGGAATGCTAAAGAAGATTGCAAAGATTTTGAGGGATCTTCATTTAAGAAGTTGAACTTCAGACTTGAGAAGAGGTAACCAGGTGTGAGTGAAATTCGGATGCCTAAGTATGTCTGGAATAATGTATTAATGTGTATATAAATTTTCTTGGTAGGGATACGTCTCCGTGCTTTTCTTTGATAGTAGATTCATTTTGGCAGCTAGTGTCCAAAGTAAGTATCAACTAATCGGGTGGATTTCATACTAAAATGCGAATGCAACTTGCAAATGTGGGGAATTAGGGATCATCTATTTTGCATGTGCTTATTTCTCTCATGCGGGTTGGAATTTAGGTTGATATTTTATTTTATTTATTTTTTTGAGGGAAAAGATTTAGGTTGATATGATTAACCTTTTTGCGTTAGGGATTTGTCTTTTGTTAACATTAGTTTCTTACATATCAGTTTTATTTATTTTTTGTTAAGTGAATCTTCACTTCACAAGGTGCGTTTTTGATCGGTGAGTAATAGCAATGATTTATTGCCTATTGAAATAACCCCTTCACAAGGGTTGATAGGTCTTGACTCTTAGAGATCTTAGTTTTTAAAAATGCAAGGCCCAAGAAATACCCAAAAATCCAAGCAAATGCACATGTACAAAGTTGTTGTCAGTGAGAAGATCGACAAGGATAAGTTACAAGAATTAAATTTGTTGCGGGAAAATCCTAAAAGGGACGAGGGAGAGAGAAATGAGTATTAGGGGTTGATCTTGAATTTGAGACAATTGAGGTATATAGGGGATGGCTTATATAGGGTGGCTATGTTACCTAGACTCGTCTAGGAGTGTTGGGTATGGGTATAGATCCGAGGGTCCGATACGACAATTCCAAAAATTGGGGGCACGGGGACTATGTCCAAGATTTAGACACGGGTACGGGGACACGACAATTATTAAATATATTTAATTTATTTCTACTTATTAGAATGTTTTCCAGAAAATAAAAAGGAAAAGAAGAGAAAGAAATAAAAAGGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAAAGGAAAAAGAAAAGAAATAAAAAGGAAAAAGAAAAAAGAAAGAAAGAAGGGGGGAGCCATGTGACTACTCATCCTCAAGGAGGGCATATATCCTGTGAGTGTTAGGCCATATAGATACCCCCAGAGCCAAAAAGATGAGGTTGAAAAATTGGTGCACGATTTGTTAAAGGCAGGAATAATACAAGTAACAACCCGTTCTCAAGTCCCGTACTCTTGGTGAAAAAGAAAGACGGCTCATGGCGTTTTTGTGTTGATTACCGAGCGTTACACAAAGTAACCGTCCCTGACAAATACCTAGATGAGTTGTTGGACGAATCGAGTGGGGCTAAGTTGTTTACAAAGCTGGACCCCAAATCAGGATACCGCCAAGTGAGGGTCAGGAGTGAAGACGTTTCCAAAGCTGCCTTTCGAACACATGAGGGGCACTACGAATTTCTCGTGATGCCATTCGGACTTACCAATGCCTCTGCTACCTTTTAAGCATTGATGAGTGAAGTGTTTAGGCCACAGTGCTACACTTGCGAAGGTTTGTTCTGGTGTTTTTTGATGATATTCTGATTAACAGCGCTAATGAAGAATTACATAAGCAGCATTTACAGGAGGTCCTTAGCCTCATGAATGAAAATCAACTTTATGCCAATTTAAAGAAGTGTGAGTTTGGCAAAAGAAAAGTCGCGTATTTGGGGCATATTATCTCGGCTGAGGGTGTTTCCTTGGACGTCCATACTAGATTGGCCAGTTCTACAAAACATCAAGGAACTCAGGGGATTTCTGGGGCTCACTGTGTACTACCGTAGGTACGTTAAAGGCTATGCTGACATTGCTTTTGCCCTTACCGAGCAGCTAAGGAAGGATAATTTTGGGTGGGATGCAGAGGCCACAAATGCGTTCCAAGCCTTGAAAGTGGCCATGACCAGTGCCCCAGTTCTTGCAATTCTAGATTTTCCCAAAACTTTCGTGGTGGAAGCGAATGCTTCCGGCTTTGGGCTAGGAGCAGTTCTTGCTCAAGACAATCACCTCGTAGCTTTTTATAGCAAGGTTCTTCGTCTAAGGGCTAGACTCAAGTCCATATACGAAAAAGAGCTCATGGCTATAGTATTGGCCGTACAGAAAATGCCACACTCTTTGTTGGGCAGGAGGTTTACAATAAAAACAGATAAGCAGTGCCTAAATACCTCATGGATCAGAGGGAGGTGGATATCAAAAATGGCTTTGCAAAATAATGGGGTACGACTGTGAAATTCTTTACAAGCCCGGGAAATCCAATCAAGCAGCAGATGTGCTTTCTCGTGAGTACGTTGGTATGATAGAATTGTGCAGCATGATCAGCTTATGTGGGGTGTTGTGGGAGCAGGTACAACCTGAGGTTGATAATGATAAATTAATACAAGGGCTTAGGCAAGACTTCATTGGAGCATGGTATTCTGTGTTACAAAGGGAGGTTAGTAATACCAAAACAGTCTGTGATAGTGAAGCAGTTGCTACTGAGTATCATGACAGTCCTATGGGGGGACAATCTGGTGATTTCAAGACATATCAAAGGCTAGCGAGCGAATGGTTTTGGCAAGGCATGAGATGGGAGGTCGCAAAATATGTGCAGGCTTGCACTGTGTGTCAACAACAGAAAGCTTCGACTCTATCCCCAGGGGTTCCCTGCAGCCGCTTCCTATTCCTCAACAGGTATGGGAGGACATATCAATGTATTTTGTGGAAAAATTACCTAAGTCTTTGGGGTTTTATACCATTCTAGTAGTCGTGGACAAATTGTCTAAATATGGACATTTCATCACCTTTAAGCACCCTTTTACAGATTGATAGCTAAGGAATTCATAAAGTGGATAGTACGTTTACATGGATTTCCCGTATCCATTGTCTCTGACCGGGACAAGGTTTTTATGAGTCTAGTTTGGAAGGAGCTCTTCAAAACGCAAGGCACGAAACTCAAGAGAAGTACTGCATACCACCCTCAATCTGATGGACAGACAGAGGTGGTGAACAAGTGTGTGCAATCCTACCTCAGATGCTTCATTGGGGGACAACCAAAAACTTGGGCAACTTGGTTACCTTGGGCAGAGTATTGGTATAACACCTCATTCCATACTTCTACTTCGTGCACTCCTTTAAAGCGGTCTATGGTAGAGACCCACCTCACTTGATCAAATACAACCAAGGTGACACAATGGTGAGTTCTCTTAAGGAGCAACTGTTAGAAAGAGGATGACTTAAAGGCCAATTTAATCTTAGCTCAGCTCAGCAGCGAATGAAGGCTGTAGCAGACTCTAAAAGGAGAGACGTGGAGTTTCAGATTGGTGACTGGGATATGTCAAGTTGCAACCTTATAGGCAACGGTCTTTGCCACAAGATCCTCAGAGAAACTTTCTTCCAGGCTTTATGGACCATTTGAGGTAGCTCAACAGATTGGGAAGATAGCTTATAAGCTTGAGTTGCCACCTACTTCCGGAATACACCCAGTTTTTCATGTGTATCAGTTAAAGGCTGCTGTGGGGAATGTGCCCGTCTTTCCCACGATACCTACCAATTGACAACTGACTTGGTTCTGGAAGCCCAACCAGAGGTTGTACTTGGAGTGCGAATGAAGGAGACAACTAAACAGGTATTGATCAAATGGGTAAACTTACATGAATTCGAGTCCACTTGGGAAGATTACTCTGCTATGGACATGTGTTTTCCCGAGTTCCACCTTGAGGACAAGGTGGCTGTTTGCGAGGGAGGTAATGCAAGGAATCAAGGCAAGCCCCTGATCATACACACTTACAACTGAGTTCTGGGTCTTTTTCTCCTAACCATAGTCCCCATATCGTGAATTATTTTAATTTCATGGGTCAGAACAGCACTTAGGTTGGGTCCTTGTTCTATATTCTGACAAAGACAGTTGTAGCATGTTTCTGACTCATTGTCATATATAAAGGCAGGCTATACTTATCAGCTGCTAGGCCTTATGTTACAAAGTGGCCTATGTTTGGTTCCATACATAAGAGTGGCTAAAAGCAACCCTTATAACCATCCTCTTAGACTAGCTACAAATCATGCAGTCTGGAAGTGTGACATTGATTAACCGAACTCCATAAGAAATCCTGTTTTCCTGTTTCACTTTCCAATCCTAGAAACTGGGAATTTGCAACTGTAAATCCTTGTAAGGTTCTTCAGTGCATAGCCTTACTTAGTCACCAACTTCTACCATCTTCAAGTGCAATTTAACTTGTGATGGCTTCAAAAGGTCGTTTTCTCAAGGAGAGGACATGGCTATCTCATCACGGCACTTTATCTCTTTCTCCCCCTTTTTCTTTTTCCATTTTTCTTGTACATAGTGTTGTAGCTGTTTGGAGATATTAAGGATTTCATGTAACCTCTTCTAGTCCTTGTCTCAAGCTTTTAGAAACTTGGACAGCCTATCTTTTACAGGTTTACCAGATGGAGGGGGCAGAGACTCAGAAGTGTAATAATTAGGGTATAGGGGCACCCTGTCTTTTCCTGTTGAATTTCCATGTCATTGTTGTGGAGCCTGGAGCTCTAATTTTATGTTCATGGATATCATAATACTAGATTAGATCCCGTGCACGCACGGATTTTGATAATTTTTTTCACAAAATATTTAACTGAATATCTCCCCAACTACTGCATAATTACAACATTTTTTAACATACTCATTTAAATTTATTCATCTAATACGCAAATTTAAAATGTTAATATGGTAATTTGTCCAAAATATTGAGTGATATATTTTCCATTATTAATATAGCGATTTGACTAAAATATTACCGATTAGAATTAATTATTATTACGTCGTATCTATTATTGCCATAATTTATAAACTAAATTTTGTTTCCATACATAAATAGTTTATAAAAAAAGATAGAAAATAAAAATAAAATAAAACAGATACACTTTTTTGGGAAAGTGGTTTTTGGCGGGAAAAAATCGCACCAGGAATTGACATGTGTCATTCCTGGTGTCTCTTTTAGTATATAGTAATAGATTTCTTACAACTTTAAGTTACTTCTATGCTTATTTTCTTTGTTTTAAAACTTATAATCACTTGAATAATTGTTTCTATTTCGAGAATAGATATAATTTGTTTTCCTTGTCTGAAATATTCAGCTAACATCCCGTCCGTCTGAATCGCAATGAAAGCGTTATTTTTTTAAGCCGTAGAGAGTATTTTACCATTTATGATTTTGGTATCATACTATCCTAGCCAAATACCATTTATTTGCATGGGGGCATGAAGGGGTGTGTGAAATATTTATATCCTCATATCCCCACAATGATTAGGACTGTATTTGAAGGTTACAAAAACAAACAACAAAACATTAGCCTTATTCCCAAAGAGATGGAGTCGGTTGTGTTAACCAAGAGTCTATCTTATGTGTTCATCCACGAAGATCCGCCTCCTCCTTTCACTTCTATCTAATGCTACATCATCTTGCAAGCCTTAAGTCCCTCCATCAAAGTCATCTTTGACCTTCATCGACTGCGCTTGAGATCCCCATTACCCCAATTCTCCACCTTCCTTAATGGTGCATCTTGTGGTTGACGTCTCACATGCCTAAACCATTGTGACAGATTCTCCCTTGTTTTATCCTCAATATCTGCAATTCCAAGTTTCCTTAGAAGATCTACGTTCCTAATTCTATCCCTCATCATGTTCCCCACAACCATCTCAATTTACACATCTCTACTACACTCATCTTTTTAATATGCTCCTTTCTAAATGCCAACGTTCTGACCCATATTGTAAATGTTCTAATTACTGTCCTATAGAATTTTCTTTTTAACGTTCAAGGTACCCTATGGTCACACAATTAACCAGTAAATGCTCTCTCATTAATGGAATTAGTGGATAGTTTAGTGGGATGTTTTGGTTTGGGCCATTGTAATATTAGTGCTTGCTGAACAGTTGATCGTTCAGTTCCACTTGAAATAGTCATTAGCAATTATCTTTTCTTTTTGATAAGGCTACTTAATTTTTAACTCGATCTGGTTCTAATGGAATTAGTGGATAGTTTAGTGGGATGTTTTGGTTTGGGCCATTGTAATATTAGTGCTTGCTGAACAGTTGATCGTTCAGTTCCACTTGAAATAGTCATTAGCAATTATCTTTTCTTTTTGATAAGGCTACTTAATTTTTAACTCGATCTGGTTCTAATGGCTGGTTTCATATACAGGTTTCCGGATCTATTTTGGGCAATTATGTCTTTTTTCTGGTCTCTGTTTCATATCTTTGAATTCCCTCAATCTCTATTTGTTTGTTGCAGGCTTGTGCAATTTACAGTAACTGGTGGCCTTTGTTGTCAGGTGCGTTCTGACATCTGTACAGTAACAAGGAGAACATGATTGTAATTTTGGTTGCATTTTCATGACTTGGTTGCTATGTTTCTTGTAGCTCTAATGTATGTGGTAGTCCCCATGCCATGCATGTTCTTTGGAGGTGGATCCACACAATTCTTAGTAAGTCGAGATGGTGGAGGGTAAGACTTTTACTTTATTTTACTTCAAATCATCAATTGGCAATTTGCAGTATTTGCCTTGTCAAATAGTAGTGGTTTTGGATCTCTGTATATGTGTGAATGGTTAGATGCAAGAAGGGCTGTCAAAAAGTGACCCCACCCGAAAAACCGACCGTAACCAACCAACATCCGAACCGAATATATCCGAGAAATAGTGCGATCAAAACCAACCCGAACCGATCAGTTGTTGACCCAAAATCCGAATTAAACGTTAATTCAAGACCCGAACCTCTACCGACCCAGGAGAACCGTAACCCGATTTGCATCGATAAATTTTAATCGAACCGAACCCGCGTCTGATCCGATAGCAATTTGAAAACCGATTTTACCCGATAACAACCGCAATGAACCCTATCCGATAAAACCTGATATCCGATAAAACCTGATATCCGATTTAACCCGACCCGTGTCTATCAAATTCGGATTCAACCGAATTGTTGCTAATCCGACCCGATTAAGTTCGATATCCGAAAATATCCTAACTCTAGTTAATCCGATAAACGGAAGTCACCTGAGATTAAAAATAAAATAAAATTATACCCGATTTTACCCGAATTCTATTCAACTTACTTGTCGGATATCGAACTAACACAAGTTTTTTTTTTGGCAAGCAAGTAAGAGAATATATTACCATCAATCAACAGTTTTACAACCAAAAGCCAAGGGAGGAAGACAACCAAATAAGCTATCAACTCAGCCCTAAGGCAGACTAAACAGATTACAAACAGTGAGAGCAACAAAGCAACAGGTTACTCATAAAGAAAAAACCAGTTCCTGTCATTAAGGGCCCACCTGGATTTAGAGTATTTGTTAAGGGGGTAATGATTAGGCTGCAACAGTTACTTGGGTATTAATTTTGGGGGAAATATCTACTGGGCTTAAAAATTCCATGGGTTTGGTATGAGGGTATAAATGATGGGCTTAAAAAAATACTGGGTTTGAAATTATCCAAAGAACTTTAAAATCTCATATCTACCTCATTTTTTCTATTTATTGAAAGCCATTGTTAAATATGTAGCACCACCATTCATGGCGGCGGCGCTGCCTGGCCGCTACCACGTCGTCAGTGGCTTTGTTGGCTGATAGCTTCAACATGAATGAAATTTAACGTCAATATCAATGGAGCCAACTCTTTTGCCAATTTCTTCACCCAATTTTGTAGATCTTCAAAATAGAAATTAAGGAGAGAAAAATCTGACAAATATTTAGTGGTCTTCAAGAGATAGAGATTTGATGGCGATCGTGAATCAACGTTAAGAACATTGAGTGAATGAGATCTACGAAATGAAAGATACAAGGAAACAGATGAATTTTCCGGCAACTCCGGCGACTGGTGGTGATAATTGCTTTAAAAAGTACAAGCTAGGTGTTTTAGGTTTTGATGTTGGGAGAGATGAGTAATTGTTATGGGGGAGATAATTACCCTAGGGGGGGGCTAGAGTAATGTTTTACCCCTCATTTGAGGGGAGAACATTACTCCAACATCAATCTCCCTCAATCCAAGCGTTCAAAAATGGCTTGCAACTTTTACTCCCTTATTCATTCCCTTCCTTTACACCCAATCCAGGCGACCCCTAAGACTAACTTTATCACTGATAATGTTTTTGATCCTAAGCTTGACATCCTGCTGAACTTGAAGAACAGCATGGGCCACAGAAGGTACTTTGGATTCCCAAACAGCACAATTCCTGGCTTTCCAGACATGATATATGATGGCAGCAATAGCAGTGCAATAGACTTTCTTCTTAAAGTCACCTTTAGAGTATCTCTTGAACCATTTGGTATTCACATACATAGAGTTCCCAGTGTGTTTAATGTTCAGCCATTGTAGAAAACAAGGTCGTTAGTTTGCAGTCAGCACTGTACCTATAGTTGCAGAACAGGTGATGGGTAGTTTCTTCAGTGGTTCCTATCCAAGCAGAACCCAAATCAGCACAACCACTCTAGCTAGCCACAGGATAAACCTGGGCACAGATAGCCTATTCCTGACTTGGTTGTGCCAAGGGACTTTAGTGTGTTTATCACTGAGATTGGAGTACATCTCCTTGATAGAGTAGCTACTCTTATGTAACCAGGAGCAAGCCTGCAACTTTTCAGAACATATGTTCTTCACTTGACAGACAGCCCAACTAGCATAGTTAGAAGCTATGAACAGAGACCAGTCTCTGTTCTTCACATAGAGAGCATGGATCCACTTGACCCATAAATTGTCTTGCTTTTGAGCTACCGACCAAGCTTGTTTACCAATAGCAGCTTATATTCCTGAACCCTAACCCTCCACAATTTTTTGGGTGGCAAAGTTTATCCCAAGCCGCAGATCCAAGCCTCCTGTCATCAAAGTTCCCATACCAGAGAAAGCTCCTGCAAATGGCATTTATCTTCTTCATAATGGACTTAGGAAAGATAAAAATCCGAGACCAGTAAACACTGATACTCATGAGCACTGAGTTGAGCTCCAAACTTTTATTCTAGCCACCATTCTATCTATTAGAACATCACATTCACCCCCTTTTAGCTTCCAAGGACTGATTGGGACCCCTAAATATCTAAAAGGAAGGGAACCAATAGGGAAGATGGTGCTCTTCCTGTAGCATTATGTAAATTCAAATCGATAAATGAAAATTTACTTTAAGTTCTATTTATATAAATAATTTGGAGACAAAGTAATAGAAGTGTAAAAAATCTTTATTTGGCATGAAGTCATAGAATAATAAGGTGATCTGAATTTTATCGCGAACTCGAGAGTCATTGTTTACTCGTTTAGTAGAATACAAGATTACAAACTTAACTCAATAACCGCGAACCAAATCCTTATTATATTGACCCGAATCAGAGGTACTTCTTATCCGAACTTGACCCGATCGAGACTCGCCGATCCATACTTGACCCGAATCCGAGACTTAGCCGATCCGGACATGACACGTACTCGAAGTAAACGGGTCAAATTGTACACGAAATAAACCGGTCAAATTGTACCCCAAGTAAACCGGTCAAATTATACCTGAATCGGACATACACCCGTACCAAATCAAATCGATACAAAACCGTTTTAAACCCTCGGTTCCAACCAAATCCGAGATTGACCCAAACCGAAGTTAACTTAACCGAAAACGAGTTTAATCCGAAACAATTTATAATCCGATTTCACCAGAAGAGAAGTTAACCGAACCAATCCGAATTGACTCGAATAGAAATATTGACCCGACATTAACCGATTTCGACGTGACCCGATTGATATGATCGGATGACCTGATTTGACATCCCTAGGTGCAATTGTGCAAATATGTCGGAAAGGCTAGCGAGAATGTTTGGTGGATTGACTAAATCGAGCTCATGGAGCATATGAATTTGATTCATCAGATATTTTACAAGAGCCTTGTACCCTGTAGGCATTGGTGTGCAAGTTGACCTTGACCATGAACGTTTGGACGTTTACAGCTGCAATAAAAGAGTAGAAGACTCTTCTGTGTTTATATTGAGCTCTCTGTCTGTCTTTTCCAAATTTCAATAATAATGAAGTTTGTCTTTGTAAAGTGCTACTCCCTCCGTCCCGGAATACTCGACCCGGTTTGACCGGCACAGAGTTTAAGGGACTTGAATCGACTTATTTAATTTAATAGGTAGTAGTTGATAGTGGGGTATTATTTTAATGTAGTTAGTGGGAGGTGAGTTAAGAGGTGGGGTTGGGGAGAGTAGTGGTTGAATTTTTAATTATTTTTTGTATGGAGTAGGGGGTAGGTGGGTTAATAGGGGTGGAGTGAGAAATAATATAATATTGTTAGAATATTTCCATTTTTAGAAACAGGTCAAGTATTAAGGGACGGTCCGATAAGGAAAACAGGTCAAGTATTCCGGGACGGAGGGAGTACATGGTATACATTGCTGTTTACCAGTTAGATAGATCTTTCGCGAGCGTTGTAGAGACTTCATGGGTTGTCTATTTGAGTTTTACTGTTTTGGTTGTGATTTACTTGACACATATTGTTTCACTCTCTAAACTTCGATTTATTGTGTGTGAGTTTGTTTGCAGCTGGGTAGATGCTGCTAAGTTCTTGACGGGAGCTTCTGCAGTGGGAAGCATTGCCATTCCTATGATTCTTAAACATGCTCATCTGATAGAAACAGGAGCTATGCTCATTGAGTTAGCATCATTCTTCTTGTTTGTCTGTACTGTCTTGTGCTTTCACCGTGCTAGCCTTGATGACGAATGGTAGAATGTATTGAGTTATCCAGATTCCAGAGTTGATAGAAAATGATTGGTAACTGCTAGAAGAAAGCGGTGTAATATGATCTGATCTGTATACTGGTAGATAAGAGGCTGAGCAATTTAAATTCTTGTGTCCAGCAAATGTATATTTTGGGTTGTGAAGTAACAAACTGGTTCTTGTATAGAGACGTTTCCTGGATCTGTGGTTGACTTCATTTTGGAGCTAATGTATGAATATGTCAACTCAAGGTTCTACAATCGAAAAACACTTTTGCGGTGGCATATTTCTTTCATTACCAGGGTTGAACTTAGACCTAACCAAATGGCGAGACGGGTTCGGATCTGGTCGTGGCCTAGAATGAAACCCATTATGTCAGGCC

mRNA sequence

AAATGGAATTGTTCAGATGTTCACAAGTTTTCACTTTTCTCTAGAGTCGACTTGACTTTCCCTTTGTTTATTTATGATCATTTCACTCTGTCAGTCCACAAGAAACCCCAATTCAGAGTCTTTCAAAAGCAATCTGCTTTCCCCTTCTCCACGGTTGGAAATTTAGAATTTCAGGTTGCAAATTTGAATTTGGAATTATAATCTAATCCTCAAATCATGGCGATGACAGTAGAAGGTTCACTTGTTCCTTTTTCTTAATTTTTTTTTGTTTTCTTTCCCCTAAAAGTTCGTATTTGATCATGATTTCTATTTTTCTTTTTGCATAATTATTTCAATTTCTTTATCATATATCCGTTTCTTTTCTGAACTGCATCGTAGGCTAAATCATAATGTTGGAGTTGTAAATTCTTCATAATTTGATTTTAAACAAAGTTAGGGTTTTTGAGAAAATTTTCCTGAATTTTCTTGTTGGAATTGGTAAATTATTTCAATTCATCATTTTGATGATATCCCCACGAAATATTGTGTTTCCAAAATTATGATTTTGACTTATCTTGTTTGTTGTGCTGACTGTTGTTTGTTTGATGCATCGCGGGCTTGCTGTTAATCGATTATTGCTTTCTTCGGCAGTGCTCTGTGGGCTTGCATTTACTTTTTCAGTCAGTATCATGTTGCAGATAATGGCTTGTGCAATTTACAGTAACTGGTGGCCTTTGTTGTCAGCTCTAATGTATGTGGTAGTCCCCATGCCATGCATGTTCTTTGGAGGTGGATCCACACAATTCTTAGTAAGTCGAGATGGTGGAGGCTGGGTAGATGCTGCTAAGTTCTTGACGGGAGCTTCTGCAGTGGGAAGCATTGCCATTCCTATGATTCTTAAACATGCTCATCTGATAGAAACAGGAGCTATGCTCATTGAGTTAGCATCATTCTTCTTGTTTGTCTGTACTGTCTTGTGCTTTCACCGTGCTAGCCTTGATGACGAATGGTAGAATGTATTGAGTTATCCAGATTCCAGAGTTGATAGAAAATGATTGGTAACTGCTAGAAGAAAGCGGTGTAATATGATCTGATCTGTATACTGGTAGATAAGAGGCTGAGCAATTTAAATTCTTGTGTCCAGCAAATGTATATTTTGGGTTGTGAAGTAACAAACTGGTTCTTGTATAGAGACGTTTCCTGGATCTGTGGTTGACTTCATTTTGGAGCTAATGTATGAATATGTCAACTCAAGGTTCTACAATCGAAAAACACTTTTGCGGTGGCATATTTCTTTCATTACCAGGGTTGAACTTAGACCTAACCAAATGGCGAGACGGGTTCGGATCTGGTCGTGGCCTAGAATGAAACCCATTATGTCAGGCC

Coding sequence (CDS)

ATGCATCGCGGGCTTGCTGTTAATCGATTATTGCTTTCTTCGGCAGTGCTCTGTGGGCTTGCATTTACTTTTTCAGTCAGTATCATGTTGCAGATAATGGCTTGTGCAATTTACAGTAACTGGTGGCCTTTGTTGTCAGCTCTAATGTATGTGGTAGTCCCCATGCCATGCATGTTCTTTGGAGGTGGATCCACACAATTCTTAGTAAGTCGAGATGGTGGAGGCTGGGTAGATGCTGCTAAGTTCTTGACGGGAGCTTCTGCAGTGGGAAGCATTGCCATTCCTATGATTCTTAAACATGCTCATCTGATAGAAACAGGAGCTATGCTCATTGAGTTAGCATCATTCTTCTTGTTTGTCTGTACTGTCTTGTGCTTTCACCGTGCTAGCCTTGATGACGAATGGTAG

Protein sequence

MHRGLAVNRLLLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVSRDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRASLDDEW

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00453.1	Spo00453.1	mRNA

Homology

[Close]

BLAST of Spo00453.1 vs. NCBI nr
Match: gi|902198066|gb|KNA13595.1| (hypothetical protein SOVF_115200 [Spinacia oleracea])

HSP 1 Score: 268.5 bits (685), Expect = 6.500e-69
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1

		  
Query: 1   MHRGLAVNRLLLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFF 60
           MHRGLAVNRLLLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFF
Sbjct: 1   MHRGLAVNRLLLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFF 60

Query: 61  GGGSTQFLVSRDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFV 120
           GGGSTQFLVSRDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFV
Sbjct: 61  GGGSTQFLVSRDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFV 120

Query: 121 CTVLCFHRASLDDEW 136
           CTVLCFHRASLDDEW
Sbjct: 121 CTVLCFHRASLDDEW 135

[Close]

BLAST of Spo00453.1 vs. NCBI nr
Match: gi|965671280|dbj|BAT85887.1| (hypothetical protein VIGAN_04348500 [Vigna angularis var. angularis])

HSP 1 Score: 218.0 bits (554), Expect = 1.000e-53
Identity = 101/121 (83.47%), Postives = 117/121 (96.69%), Query Frame = 1

		  
Query: 15  AVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVSRDGG 74
           +VL GLAF FS SI+LQI+ACAIY+NWWP+LSALMYV+VPMPC+FFGGGSTQFL+SRDGG
Sbjct: 39  SVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGG 98

Query: 75  GWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRASLDDE 134
           GW+DAAKFLTGASAVGSIAIP+ILKHAH+IETGAMLIEL SFF+F+CTVLCFH+A+LDD+
Sbjct: 99  GWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQANLDDD 158

Query: 135 W 136
           W
Sbjct: 159 W 159

[Close]

BLAST of Spo00453.1 vs. NCBI nr
Match: gi|950950163|ref|XP_014495330.1| (PREDICTED: vacuolar protein sorting-associated protein 55 homolog isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 217.6 bits (553), Expect = 1.300e-53
Identity = 102/125 (81.60%), Postives = 119/125 (95.20%), Query Frame = 1

		  
Query: 11  LLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVS 70
           +L  +VL GLAF FS SI+LQI+ACAIY+NWWP+LSALMYV+VPMPC+FFGGGSTQFL+S
Sbjct: 36  VLVFSVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMS 95

Query: 71  RDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRAS 130
           RDGGGW+DAAKFLTGASAVGSIAIP+ILKHAH+IETGAMLIEL SFF+F+CTVLCFH+A+
Sbjct: 96  RDGGGWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQAN 155

Query: 131 LDDEW 136
           LDD+W
Sbjct: 156 LDDDW 160

[Close]

BLAST of Spo00453.1 vs. NCBI nr
Match: gi|351722117|ref|NP_001236209.1| (uncharacterized protein LOC100306519 [Glycine max])

HSP 1 Score: 216.9 bits (551), Expect = 2.200e-53
Identity = 100/120 (83.33%), Postives = 116/120 (96.67%), Query Frame = 1

		  
Query: 16  VLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVSRDGGG 75
           VL GLAF FS SI+LQI+ACAIY+NWWP+LSALMYV+VPMPC+FFGGGSTQFL++RDGGG
Sbjct: 7   VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMTRDGGG 66

Query: 76  WVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRASLDDEW 135
           W+DAAKFLTGASAVGS+AIP+ILKHAH+IETGAMLIEL SFF+F+CTVLCFH+ASLDD+W
Sbjct: 67  WIDAAKFLTGASAVGSLAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQASLDDDW 126

[Close]

BLAST of Spo00453.1 vs. NCBI nr
Match: gi|502111977|ref|XP_004494212.1| (PREDICTED: vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cicer arietinum])

HSP 1 Score: 216.1 bits (549), Expect = 3.800e-53
Identity = 100/120 (83.33%), Postives = 116/120 (96.67%), Query Frame = 1

		  
Query: 16  VLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVSRDGGG 75
           VL GLAF FS SI+LQI+ACAIY+NWWP+LSALMYV+VPMPC+FFGGGSTQFL+SRDGGG
Sbjct: 7   VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGG 66

Query: 76  WVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRASLDDEW 135
           W+DAAKFLTGASA+GSIAIP+ILKHAH+IETGAMLIEL SFF+F+CTV+CFH+ASLDD+W
Sbjct: 67  WMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 126

[Close]

BLAST of Spo00453.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R267_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_115200 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.500e-69
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1

		  
Query: 1   MHRGLAVNRLLLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFF 60
           MHRGLAVNRLLLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFF
Sbjct: 1   MHRGLAVNRLLLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFF 60

Query: 61  GGGSTQFLVSRDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFV 120
           GGGSTQFLVSRDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFV
Sbjct: 61  GGGSTQFLVSRDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFV 120

Query: 121 CTVLCFHRASLDDEW 136
           CTVLCFHRASLDDEW
Sbjct: 121 CTVLCFHRASLDDEW 135

[Close]

BLAST of Spo00453.1 vs. UniProtKB/TrEMBL
Match: A0A0S3RZD2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G348500 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.000e-54
Identity = 101/121 (83.47%), Postives = 117/121 (96.69%), Query Frame = 1

		  
Query: 15  AVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVSRDGG 74
           +VL GLAF FS SI+LQI+ACAIY+NWWP+LSALMYV+VPMPC+FFGGGSTQFL+SRDGG
Sbjct: 39  SVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGG 98

Query: 75  GWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRASLDDE 134
           GW+DAAKFLTGASAVGSIAIP+ILKHAH+IETGAMLIEL SFF+F+CTVLCFH+A+LDD+
Sbjct: 99  GWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQANLDDD 158

Query: 135 W 136
           W
Sbjct: 159 W 159

[Close]

BLAST of Spo00453.1 vs. UniProtKB/TrEMBL
Match: C6SZQ4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.600e-53
Identity = 100/120 (83.33%), Postives = 116/120 (96.67%), Query Frame = 1

		  
Query: 16  VLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVSRDGGG 75
           VL GLAF FS SI+LQI+ACAIY+NWWP+LSALMYV+VPMPC+FFGGGSTQFL++RDGGG
Sbjct: 7   VLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMTRDGGG 66

Query: 76  WVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRASLDDEW 135
           W+DAAKFLTGASAVGS+AIP+ILKHAH+IETGAMLIEL SFF+F+CTVLCFH+ASLDD+W
Sbjct: 67  WIDAAKFLTGASAVGSLAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQASLDDDW 126

[Close]

BLAST of Spo00453.1 vs. UniProtKB/TrEMBL
Match: K7KG27_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.500e-53
Identity = 100/119 (84.03%), Postives = 114/119 (95.80%), Query Frame = 1

		  
Query: 17  LCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVSRDGGGW 76
           L GLAF FS SI+LQI+ACAIY+NWWP+LSALMYV+VPMPC+FFGGGSTQFL+SRDGGGW
Sbjct: 93  LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGW 152

Query: 77  VDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRASLDDEW 136
           +DAAKFLTGASAVGSIAIP+ILKHAH+IETGAMLIEL SFF+F+CTVLCFH+A LDD+W
Sbjct: 153 IDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQAGLDDDW 211

[Close]

BLAST of Spo00453.1 vs. UniProtKB/TrEMBL
Match: A0A0B2QGA7_GLYSO (Vacuolar protein sorting-associated protein 55 like OS=Glycine soja GN=glysoja_021543 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.500e-53
Identity = 100/119 (84.03%), Postives = 114/119 (95.80%), Query Frame = 1

		  
Query: 17  LCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVSRDGGGW 76
           L GLAF FS SI+LQI+ACAIY+NWWP+LSALMYV+VPMPC+FFGGGSTQFL+SRDGGGW
Sbjct: 93  LAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGW 152

Query: 77  VDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRASLDDEW 136
           +DAAKFLTGASAVGSIAIP+ILKHAH+IETGAMLIEL SFF+F+CTVLCFH+A LDD+W
Sbjct: 153 IDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQAGLDDDW 211

[Close]

BLAST of Spo00453.1 vs. ExPASy Swiss-Prot
Match: VSP55_ARATH (Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana GN=At1g32410 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.400e-26
Identity = 59/116 (50.86%), Postives = 83/116 (71.55%), Query Frame = 1

		  
Query: 9   RLLLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFL 68
           R  L    +  LA   S  I+LQI+ACA+++NWWP+LS +MYV++PMP +FFGG  +  L
Sbjct: 9   RTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSL 68

Query: 69  VSRDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVL 125
            +     W++AAKFLTGASAVGS+AIP ILKHA LI  GA+ ++L+S+ +F+  +L
Sbjct: 69  FNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

[Close]

BLAST of Spo00453.1 vs. TAIR (Arabidopsis)
Match: AT3G11530.1 (Vacuolar protein sorting 55 (VPS55) family protein)

HSP 1 Score: 204.1 bits (518), Expect = 5.300e-53
Identity = 93/112 (83.04%), Postives = 106/112 (94.64%), Query Frame = 1

		  
Query: 24  FSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFLVSRDGGGWVDAAKFL 83
           FS SI+LQI+ACAIY NWWP+LSALMYVVVPMPCMFFGGGSTQFL+SRDGGGW+DAAKFL
Sbjct: 2   FSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLISRDGGGWIDAAKFL 61

Query: 84  TGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVLCFHRASLDDEW 136
           TGAS VGS+AIP+IL+HA +IETGAMLIE  SFF+F+CTV+CFHRASLDD+W
Sbjct: 62  TGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRASLDDDW 113

[Close]

BLAST of Spo00453.1 vs. TAIR (Arabidopsis)
Match: AT1G32410.1 (Vacuolar protein sorting 55 (VPS55) family protein)

HSP 1 Score: 120.6 bits (301), Expect = 7.700e-28
Identity = 59/116 (50.86%), Postives = 83/116 (71.55%), Query Frame = 1

		  
Query: 9   RLLLSSAVLCGLAFTFSVSIMLQIMACAIYSNWWPLLSALMYVVVPMPCMFFGGGSTQFL 68
           R  L    +  LA   S  I+LQI+ACA+++NWWP+LS +MYV++PMP +FFGG  +  L
Sbjct: 9   RTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSL 68

Query: 69  VSRDGGGWVDAAKFLTGASAVGSIAIPMILKHAHLIETGAMLIELASFFLFVCTVL 125
            +     W++AAKFLTGASAVGS+AIP ILKHA LI  GA+ ++L+S+ +F+  +L
Sbjct: 69  FNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

The following BLAST results are available for this feature:

BLAST of Spo00453.1 vs. NCBI nr
BLAST of Spo00453.1 vs. UniProtKB/TrEMBL
BLAST of Spo00453.1 vs. ExPASy Swiss-Prot
BLAST of Spo00453.1 vs. TAIR (Arabidopsis)

BLAST of Spo00453.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902198066\|gb\|KNA13595.1\|	6.5e-69	100.	hypothetical protein SOVF_1152...	[more]
gi\|965671280\|dbj\|BAT85887.1\|	1.0e-53	83.4	hypothetical protein VIGAN_043...	[more]
gi\|950950163\|ref\|XP_014495330.1\|	1.3e-53	81.6	PREDICTED: vacuolar protein so...	[more]
gi\|351722117\|ref\|NP_001236209.1\|	2.2e-53	83.3	uncharacterized protein LOC100...	[more]
gi\|502111977\|ref\|XP_004494212.1\|	3.8e-53	83.3	PREDICTED: vacuolar protein so...	[more]

BLAST of Spo00453.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9R267_SPIOL	4.5e-69	100.	Uncharacterized protein OS=Spi...	[more]
A0A0S3RZD2_PHAAN	7.0e-54	83.4	Uncharacterized protein OS=Vig...	[more]
C6SZQ4_SOYBN	1.6e-53	83.3	Putative uncharacterized prote...	[more]
K7KG27_SOYBN	3.5e-53	84.0	Uncharacterized protein OS=Gly...	[more]
A0A0B2QGA7_GLYSO	3.5e-53	84.0	Vacuolar protein sorting-assoc...	[more]

BLAST of Spo00453.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
VSP55_ARATH	1.4e-26	50.8	Vacuolar protein sorting-assoc...	[more]

BLAST of Spo00453.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G11530.1	5.3e-53	83.0	Vacuolar protein sorting 55 (V...	[more]
AT1G32410.1	7.7e-28	50.8	Vacuolar protein sorting 55 (V...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007262	Vacuolar protein sorting 55	PANTHER	PTHR12050	LEPTIN RECEPTOR-RELATED	coord: 5..135 score: 1.0
IPR007262	Vacuolar protein sorting 55	PFAM	PF04133	Vps55	coord: 18..129 score: 4.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
cellular_component	GO:0005773	vacuole

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25627	0.73	Barchart \| Table
Spo18637	0.71	Barchart \| Table
Spo10215	0.70	Barchart \| Table
Spo24148	0.69	Barchart \| Table
Spo27009	0.67	Barchart \| Table
Spo09303	0.67	Barchart \| Table
Spo14240	0.67	Barchart \| Table
Spo15089	0.67	Barchart \| Table
Spo19670	0.67	Barchart \| Table
Spo21823	0.67	Barchart \| Table
Spo26073	0.67	Barchart \| Table
Spo02230	0.66	Barchart \| Table
Spo26527	0.66	Barchart \| Table
Spo15732	0.66	Barchart \| Table
Spo13426	0.66	Barchart \| Table
Spo22178	0.66	Barchart \| Table
Spo22678	0.66	Barchart \| Table
Spo26037	0.66	Barchart \| Table
Spo19609	0.65	Barchart \| Table
Spo26995	0.65	Barchart \| Table
Spo12504	0.65	Barchart \| Table
Spo02254	0.65	Barchart \| Table
Spo26663	0.65	Barchart \| Table