Spo00528 (gene)

Overview
NameSpo00528
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransmembrane protein, putative
LocationSpoScf_03517 : 6435 .. 6847 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAAAGATAGTAGATTCAGAAGTTAAGCGTCATCAACATCAACACCACGACGAAGAGATGGAAGAAGAAGAAGAAGAAAGGAGGCGAGGTTGTCGGCCGATAGCATACATACTTGGATTCCCTTTTGCTGTCTCTGCTTTCCTTCTATCTCTTGCTGCTGGTATTGTTTGGATTCTTGGGTATGTTCACATTTCATCTTCCCCTTTACAATTAAAGCTAATTTTCATGAATCTGTTGACTAATTTACTGTTTCCTAACTTTGTTTAATTTTTTTCTGGTACAGGTCATTATTGAGTTACGTGTGCCCATGTCTGACCTGCTGTTCAGATCTTGCAAACAAAGCTATGGACATTATAAGGCTTCCTATTGATGTATTCATATGGTTTGTTGATAAAATTCCCTGCTGA

mRNA sequence

ATGAAAGGAAAGATAGTAGATTCAGAAGTTAAGCGTCATCAACATCAACACCACGACGAAGAGATGGAAGAAGAAGAAGAAGAAAGGAGGCGAGGTTGTCGGCCGATAGCATACATACTTGGATTCCCTTTTGCTGTCTCTGCTTTCCTTCTATCTCTTGCTGCTGGTATTGTTTGGATTCTTGGGTCATTATTGAGTTACGTGTGCCCATGTCTGACCTGCTGTTCAGATCTTGCAAACAAAGCTATGGACATTATAAGGCTTCCTATTGATGTATTCATATGGTTTGTTGATAAAATTCCCTGCTGA

Coding sequence (CDS)

ATGAAAGGAAAGATAGTAGATTCAGAAGTTAAGCGTCATCAACATCAACACCACGACGAAGAGATGGAAGAAGAAGAAGAAGAAAGGAGGCGAGGTTGTCGGCCGATAGCATACATACTTGGATTCCCTTTTGCTGTCTCTGCTTTCCTTCTATCTCTTGCTGCTGGTATTGTTTGGATTCTTGGGTCATTATTGAGTTACGTGTGCCCATGTCTGACCTGCTGTTCAGATCTTGCAAACAAAGCTATGGACATTATAAGGCTTCCTATTGATGTATTCATATGGTTTGTTGATAAAATTCCCTGCTGA

Protein sequence

MKGKIVDSEVKRHQHQHHDEEMEEEEEERRRGCRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDVFIWFVDKIPC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00528.1Spo00528.1mRNA


Homology
[Close]
BLAST of Spo00528.1 vs. NCBI nr
Match: gi|902224504|gb|KNA19806.1| (hypothetical protein SOVF_058070 [Spinacia oleracea])

HSP 1 Score: 206.8 bits (525), Expect = 1.700e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

		  

Query: 1   MKGKIVDSEVKRHQHQHHDEEMEEEEEERRRGCRPIAYILGFPFAVSAFLLSLAAGIVWI 60
           MKGKIVDSEVKRHQHQHHDEEMEEEEEERRRGCRPIAYILGFPFAVSAFLLSLAAGIVWI
Sbjct: 1   MKGKIVDSEVKRHQHQHHDEEMEEEEEERRRGCRPIAYILGFPFAVSAFLLSLAAGIVWI 60

Query: 61  LGSLLSYVCPCLTCCSDLANKAMDIIRLPIDVFIWFVDKIPC 103
           LGSLLSYVCPCLTCCSDLANKAMDIIRLPIDVFIWFVDKIPC
Sbjct: 61  LGSLLSYVCPCLTCCSDLANKAMDIIRLPIDVFIWFVDKIPC 102
[Close]
BLAST of Spo00528.1 vs. NCBI nr
Match: gi|568831844|ref|XP_006470161.1| (PREDICTED: uncharacterized protein LOC102618586 [Citrus sinensis])

HSP 1 Score: 96.7 bits (239), Expect = 2.500e-17
Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP  +++G PFA  A LLSL   ++W+LGS+LS +CPC  CC+ LAN AMD+++LPI +
Sbjct: 4   CRPFGFLIGLPFAFIALLLSLVGAVIWLLGSVLSCLCPCCVCCAGLANIAMDLVKLPITI 63

Query: 93  FIWFVDKIPC 103
             WF+D+IPC
Sbjct: 64  LRWFIDQIPC 73
[Close]
BLAST of Spo00528.1 vs. NCBI nr
Match: gi|641830498|gb|KDO49585.1| (hypothetical protein CISIN_1g035095mg [Citrus sinensis])

HSP 1 Score: 96.3 bits (238), Expect = 3.300e-17
Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP  +++G PFA  A LLSL   ++W+LGS+LS +CPC  CC+ LAN AMD+++LPI +
Sbjct: 4   CRPFGFLIGLPFAFIALLLSLVGAVIWLLGSVLSCLCPCCICCAGLANIAMDLVKLPITI 63

Query: 93  FIWFVDKIPC 103
             WF+D+IPC
Sbjct: 64  LRWFIDQIPC 73
[Close]
BLAST of Spo00528.1 vs. NCBI nr
Match: gi|567908765|ref|XP_006446696.1| (hypothetical protein CICLE_v10017380mg [Citrus clementina])

HSP 1 Score: 96.3 bits (238), Expect = 3.300e-17
Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP  +++G PFA  A LLSL   ++W+LGS+LS +CPC  CC+ LAN AMD+++LPI +
Sbjct: 4   CRPFGFLIGLPFAFIALLLSLVGAVIWLLGSVLSCLCPCCICCAGLANIAMDLVKLPITI 63

Query: 93  FIWFVDKIPC 103
             WF+D+IPC
Sbjct: 64  LRWFIDQIPC 73
[Close]
BLAST of Spo00528.1 vs. NCBI nr
Match: gi|590691097|ref|XP_007043689.1| (Uncharacterized protein TCM_008212 [Theobroma cacao])

HSP 1 Score: 95.9 bits (237), Expect = 4.300e-17
Identity = 37/70 (52.86%), Postives = 55/70 (78.57%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP+ ++LG PFA+ A +LS+   ++W+LG++LS +CPC  CC+ LAN AMD+I+LP+ V
Sbjct: 4   CRPLGFLLGLPFALVAVVLSVVGAVIWVLGTILSCLCPCCICCAGLANFAMDLIKLPVKV 63

Query: 93  FIWFVDKIPC 103
             WF+D+IPC
Sbjct: 64  LRWFIDQIPC 73
[Close]
BLAST of Spo00528.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJV9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_058070 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.200e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

		  

Query: 1   MKGKIVDSEVKRHQHQHHDEEMEEEEEERRRGCRPIAYILGFPFAVSAFLLSLAAGIVWI 60
           MKGKIVDSEVKRHQHQHHDEEMEEEEEERRRGCRPIAYILGFPFAVSAFLLSLAAGIVWI
Sbjct: 1   MKGKIVDSEVKRHQHQHHDEEMEEEEEERRRGCRPIAYILGFPFAVSAFLLSLAAGIVWI 60

Query: 61  LGSLLSYVCPCLTCCSDLANKAMDIIRLPIDVFIWFVDKIPC 103
           LGSLLSYVCPCLTCCSDLANKAMDIIRLPIDVFIWFVDKIPC
Sbjct: 61  LGSLLSYVCPCLTCCSDLANKAMDIIRLPIDVFIWFVDKIPC 102
[Close]
BLAST of Spo00528.1 vs. UniProtKB/TrEMBL
Match: V4UCE7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017380mg PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.300e-17
Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP  +++G PFA  A LLSL   ++W+LGS+LS +CPC  CC+ LAN AMD+++LPI +
Sbjct: 4   CRPFGFLIGLPFAFIALLLSLVGAVIWLLGSVLSCLCPCCICCAGLANIAMDLVKLPITI 63

Query: 93  FIWFVDKIPC 103
             WF+D+IPC
Sbjct: 64  LRWFIDQIPC 73
[Close]
BLAST of Spo00528.1 vs. UniProtKB/TrEMBL
Match: A0A067E6T1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035095mg PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.300e-17
Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP  +++G PFA  A LLSL   ++W+LGS+LS +CPC  CC+ LAN AMD+++LPI +
Sbjct: 4   CRPFGFLIGLPFAFIALLLSLVGAVIWLLGSVLSCLCPCCICCAGLANIAMDLVKLPITI 63

Query: 93  FIWFVDKIPC 103
             WF+D+IPC
Sbjct: 64  LRWFIDQIPC 73
[Close]
BLAST of Spo00528.1 vs. UniProtKB/TrEMBL
Match: A0A061E3I1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008212 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.000e-17
Identity = 37/70 (52.86%), Postives = 55/70 (78.57%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP+ ++LG PFA+ A +LS+   ++W+LG++LS +CPC  CC+ LAN AMD+I+LP+ V
Sbjct: 4   CRPLGFLLGLPFALVAVVLSVVGAVIWVLGTILSCLCPCCICCAGLANFAMDLIKLPVKV 63

Query: 93  FIWFVDKIPC 103
             WF+D+IPC
Sbjct: 64  LRWFIDQIPC 73
[Close]
BLAST of Spo00528.1 vs. UniProtKB/TrEMBL
Match: W1PHH0_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00058p00124800 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.700e-17
Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP+ +++G PFA+ A LLSL   +VW++GS+LS +CPC  CC+ LAN AM +I+LPI +
Sbjct: 4   CRPLGFLIGLPFALVALLLSLVGAVVWVIGSVLSCICPCCICCAGLANLAMALIKLPIKI 63

Query: 93  FIWFVDKIPC 103
             WF D IPC
Sbjct: 64  IRWFTDSIPC 73
[Close]
BLAST of Spo00528.1 vs. TAIR (Arabidopsis)
Match: AT2G20562.1 (unknown protein)

HSP 1 Score: 84.3 bits (207), Expect = 4.600e-17
Identity = 34/70 (48.57%), Postives = 51/70 (72.86%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP+ +++G PFA+ A +L+L   ++WI+G++LS +CPC  C + LAN A+D+I+LPI V
Sbjct: 4   CRPLGFLIGLPFALVALVLALVGAVIWIIGTVLSCLCPCCFCFAALANFAVDLIKLPIKV 63

Query: 93  FIWFVDKIPC 103
             WF   IPC
Sbjct: 64  LRWFTHSIPC 73
[Close]
BLAST of Spo00528.1 vs. TAIR (Arabidopsis)
Match: AT2G31090.1 (unknown protein)

HSP 1 Score: 78.6 bits (192), Expect = 2.500e-15
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 1 

		  

Query: 33  CRPIAYILGFPFAVSAFLLSLAAGIVWILGSLLSYVCPCLTCCSDLANKAMDIIRLPIDV 92
           CRP+ ++LG PFA  + LLS+   I+WI+G LLS +CPC  C + L   A+ +I+ PI V
Sbjct: 6   CRPLGFLLGLPFAFLSLLLSIIGVIIWIVGLLLSCICPCCLCVTVLVEIAIGLIKAPIHV 65

Query: 93  FIWFVDKIPC 103
             WF+ KIPC
Sbjct: 66  MEWFMSKIPC 75
The following BLAST results are available for this feature:
BLAST of Spo00528.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902224504|gb|KNA19806.1|1.7e-50100.hypothetical protein SOVF_0580... [more]
gi|568831844|ref|XP_006470161.1|2.5e-1754.2PREDICTED: uncharacterized pro... [more]
gi|641830498|gb|KDO49585.1|3.3e-1754.2hypothetical protein CISIN_1g0... [more]
gi|567908765|ref|XP_006446696.1|3.3e-1754.2hypothetical protein CICLE_v10... [more]
gi|590691097|ref|XP_007043689.1|4.3e-1752.8Uncharacterized protein TCM_00... [more]
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BLAST of Spo00528.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RJV9_SPIOL1.2e-50100.Uncharacterized protein OS=Spi... [more]
V4UCE7_9ROSI2.3e-1754.2Uncharacterized protein OS=Cit... [more]
A0A067E6T1_CITSI2.3e-1754.2Uncharacterized protein OS=Cit... [more]
A0A061E3I1_THECC3.0e-1752.8Uncharacterized protein OS=The... [more]
W1PHH0_AMBTC6.7e-1754.2Uncharacterized protein OS=Amb... [more]
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BLAST of Spo00528.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00528.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G20562.14.6e-1748.5unknown protein[more]
AT2G31090.12.5e-1548.5unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 10..30
scor
NoneNo IPR availablePANTHERPTHR33834FAMILY NOT NAMEDcoord: 24..102
score: 5.3
NoneNo IPR availablePANTHERPTHR33834:SF4SUBFAMILY NOT NAMEDcoord: 24..102
score: 5.3

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo131131.00Barchart | Table
Spo085520.68Barchart | Table
Spo140160.67Barchart | Table
Spo282670.67Barchart | Table
Spo173200.66Barchart | Table
Spo178800.65Barchart | Table