Spo00552 (gene)

Overview
NameSpo00552
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionDNA-directed RNA polymerase subunit beta
Locationchr1 : 31335279 .. 31336511 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGATCAAAACCTCCATTTTCGAGCTCAAAGGCATTCATTCACCAAAACAATGAAGCGGAAGAAATGGTCTGAATTTGAAGAGAAAACCCTACTTACAAAATACGCAGAGCTCCAAAGTTCGGGAACCTTATCAAAGCTGAAAACCCGAGAGAAGAAATTCAAACCAATTGCTGACCATTTGAACGCAATTCATCATCTTCAAGATCCGATTAACTACCCATTTAAGTGGTCATGGAGAGACGTATCGATTAAGGTCCAAAATATGAGACATCAGTATTTGGGGGTGAAGCAGAAAATCAGGGTTTCAGATGGGGATTTCAATTGGGATGATGGGGAGAATCATTGGGAGAATTTCATCAAGTATAAGGAGGTTTTTGGGGATGTGGAGCTTGAATTGAAGGATAATAAGAAAGCGGGTATTGGGGATTTTAATGAAATTGGGTTTTTTGGGGGAAACGGGGATGATGGTTTAGGGTTAGGGTTAGGGTTTGAGATTGACTGTGATGATTTTGAGGACGGTGGGGAAGTGGGTGAGGAGGAGGAGGAGGAAGAAGAGAGAGAAGGTGGGGATTTTGTTTGTGGAGAGATAGAGGAAATTGAGGGTAATAGTGAGGGTTTGGGGAAGAAATTGAAGAAGAGGAGGATTGCTATGTTGGGTGCTAGGGTTTTGGAGTTGAGAGATGTGTTGGTGAAGAGGGATGAGAAGAGAAAGGAAAGAGAGTATGGTAGAGAAGAGGTTTTGGCGGCTAAAGAGGGAGGTAGGATGGATATGGAGATTTTGAGGGAGAAGAGGGTGAGGGAGGCAGAGGAGAGGGTGGAGGAGAGAGAGTTGGAGTTGGAAGAGATGCAGTTGAAGTGGGCAAGAAAAGAATTTGATAGGAAGTTGAGGTTGGAGAGAGAGTTTGATGAGGAAAGGCAGTGGAGGATGAAGATGGAGGAGAAGAGGGAGGAGGAGGAGCTTGAGTGGAGGGAAAGAATGTTGAGTTTGCAAATTGAGCATGAGAAGCAAACAATGCAAATGCATGCTGATGCTTGCCAAAACCAGTTGCAAATTCTCGGGATCATGGCACGGTTTATGTGTCAGTTTTTCGGGTCAGCTGGTGATGGGTTGGGTGGTGGGCTTAGTGGTCTTCCTCCTCAGGTTCTCCAGAATTTGCAGCATCCAGGACAAGGAGACTTGGGGGATAATAGCAAGCCTGGGTCCAATTCACCTCCAGAGTTTATATGA

mRNA sequence

ATGAGAGATCAAAACCTCCATTTTCGAGCTCAAAGGCATTCATTCACCAAAACAATGAAGCGGAAGAAATGGTCTGAATTTGAAGAGAAAACCCTACTTACAAAATACGCAGAGCTCCAAAGTTCGGGAACCTTATCAAAGCTGAAAACCCGAGAGAAGAAATTCAAACCAATTGCTGACCATTTGAACGCAATTCATCATCTTCAAGATCCGATTAACTACCCATTTAAGTGGTCATGGAGAGACGTATCGATTAAGGTCCAAAATATGAGACATCAGTATTTGGGGGTGAAGCAGAAAATCAGGGTTTCAGATGGGGATTTCAATTGGGATGATGGGGAGAATCATTGGGAGAATTTCATCAAGTATAAGGAGGTTTTTGGGGATGTGGAGCTTGAATTGAAGGATAATAAGAAAGCGGGTATTGGGGATTTTAATGAAATTGGGTTTTTTGGGGGAAACGGGGATGATGGTTTAGGGTTAGGGTTAGGGTTTGAGATTGACTGTGATGATTTTGAGGACGGTGGGGAAGTGGGTGAGGAGGAGGAGGAGGAAGAAGAGAGAGAAGGTGGGGATTTTGTTTGTGGAGAGATAGAGGAAATTGAGGGTAATAGTGAGGGTTTGGGGAAGAAATTGAAGAAGAGGAGGATTGCTATGTTGGGTGCTAGGGTTTTGGAGTTGAGAGATGTGTTGGTGAAGAGGGATGAGAAGAGAAAGGAAAGAGAGTATGGTAGAGAAGAGGTTTTGGCGGCTAAAGAGGGAGGTAGGATGGATATGGAGATTTTGAGGGAGAAGAGGGTGAGGGAGGCAGAGGAGAGGGTGGAGGAGAGAGAGTTGGAGTTGGAAGAGATGCAGTTGAAGTGGGCAAGAAAAGAATTTGATAGGAAGTTGAGGTTGGAGAGAGAGTTTGATGAGGAAAGGCAGTGGAGGATGAAGATGGAGGAGAAGAGGGAGGAGGAGGAGCTTGAGTGGAGGGAAAGAATGTTGAGTTTGCAAATTGAGCATGAGAAGCAAACAATGCAAATGCATGCTGATGCTTGCCAAAACCAGTTGCAAATTCTCGGGATCATGGCACGGTTTATGTGTCAGTTTTTCGGGTCAGCTGGTGATGGGTTGGGTGGTGGGCTTAGTGGTCTTCCTCCTCAGGTTCTCCAGAATTTGCAGCATCCAGGACAAGGAGACTTGGGGGATAATAGCAAGCCTGGGTCCAATTCACCTCCAGAGTTTATATGA

Coding sequence (CDS)

ATGAGAGATCAAAACCTCCATTTTCGAGCTCAAAGGCATTCATTCACCAAAACAATGAAGCGGAAGAAATGGTCTGAATTTGAAGAGAAAACCCTACTTACAAAATACGCAGAGCTCCAAAGTTCGGGAACCTTATCAAAGCTGAAAACCCGAGAGAAGAAATTCAAACCAATTGCTGACCATTTGAACGCAATTCATCATCTTCAAGATCCGATTAACTACCCATTTAAGTGGTCATGGAGAGACGTATCGATTAAGGTCCAAAATATGAGACATCAGTATTTGGGGGTGAAGCAGAAAATCAGGGTTTCAGATGGGGATTTCAATTGGGATGATGGGGAGAATCATTGGGAGAATTTCATCAAGTATAAGGAGGTTTTTGGGGATGTGGAGCTTGAATTGAAGGATAATAAGAAAGCGGGTATTGGGGATTTTAATGAAATTGGGTTTTTTGGGGGAAACGGGGATGATGGTTTAGGGTTAGGGTTAGGGTTTGAGATTGACTGTGATGATTTTGAGGACGGTGGGGAAGTGGGTGAGGAGGAGGAGGAGGAAGAAGAGAGAGAAGGTGGGGATTTTGTTTGTGGAGAGATAGAGGAAATTGAGGGTAATAGTGAGGGTTTGGGGAAGAAATTGAAGAAGAGGAGGATTGCTATGTTGGGTGCTAGGGTTTTGGAGTTGAGAGATGTGTTGGTGAAGAGGGATGAGAAGAGAAAGGAAAGAGAGTATGGTAGAGAAGAGGTTTTGGCGGCTAAAGAGGGAGGTAGGATGGATATGGAGATTTTGAGGGAGAAGAGGGTGAGGGAGGCAGAGGAGAGGGTGGAGGAGAGAGAGTTGGAGTTGGAAGAGATGCAGTTGAAGTGGGCAAGAAAAGAATTTGATAGGAAGTTGAGGTTGGAGAGAGAGTTTGATGAGGAAAGGCAGTGGAGGATGAAGATGGAGGAGAAGAGGGAGGAGGAGGAGCTTGAGTGGAGGGAAAGAATGTTGAGTTTGCAAATTGAGCATGAGAAGCAAACAATGCAAATGCATGCTGATGCTTGCCAAAACCAGTTGCAAATTCTCGGGATCATGGCACGGTTTATGTGTCAGTTTTTCGGGTCAGCTGGTGATGGGTTGGGTGGTGGGCTTAGTGGTCTTCCTCCTCAGGTTCTCCAGAATTTGCAGCATCCAGGACAAGGAGACTTGGGGGATAATAGCAAGCCTGGGTCCAATTCACCTCCAGAGTTTATATGA

Protein sequence

MRDQNLHFRAQRHSFTKTMKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIADHLNAIHHLQDPINYPFKWSWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENFIKYKEVFGDVELELKDNKKAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGEEEEEEEEREGGDFVCGEIEEIEGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKEREYGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLEREFDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARFMCQFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00552.1Spo00552.1mRNA


Homology
BLAST of Spo00552.1 vs. NCBI nr
Match: gi|902208678|gb|KNA16010.1| (hypothetical protein SOVF_093110 [Spinacia oleracea])

HSP 1 Score: 792.0 bits (2044), Expect = 5.100e-226
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 1

		  

Query: 1   MRDQNLHFRAQRHSFTKTMKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIAD 60
           MRDQNLHFRAQRHSFTKTMKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIAD
Sbjct: 1   MRDQNLHFRAQRHSFTKTMKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIAD 60

Query: 61  HLNAIHHLQDPINYPFKWSWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENF 120
           HLNAIHHLQDPINYPFKWSWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENF
Sbjct: 61  HLNAIHHLQDPINYPFKWSWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENF 120

Query: 121 IKYKEVFGDVELELKDNKKAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGE 180
           IKYKEVFGDVELELKDNKKAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGE
Sbjct: 121 IKYKEVFGDVELELKDNKKAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGE 180

Query: 181 EEEEEEEREGGDFVCGEIEEIEGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKE 240
           EEEEEEEREGGDFVCGEIEEIEGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKE
Sbjct: 181 EEEEEEEREGGDFVCGEIEEIEGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKE 240

Query: 241 REYGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLE 300
           REYGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLE
Sbjct: 241 REYGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLE 300

Query: 301 REFDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARF 360
           REFDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARF
Sbjct: 301 REFDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARF 360

Query: 361 MCQFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           MCQFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI
Sbjct: 361 MCQFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 410

BLAST of Spo00552.1 vs. NCBI nr
Match: gi|731315998|ref|XP_010693807.1| (PREDICTED: uncharacterized protein KIAA1211 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 650.6 bits (1677), Expect = 1.800e-183
Identity = 340/416 (81.73%), Postives = 377/416 (90.62%), Query Frame = 1

		  

Query: 1   MRDQNLHFRAQRHS--FTKTMKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPI 60
           M+ QNLHF  Q+HS  F KTMKRKKWSE EEKTLL++Y+ELQ+SGTL+KLKTREKKFKPI
Sbjct: 1   MKAQNLHFLTQKHSYSFNKTMKRKKWSELEEKTLLSRYSELQNSGTLAKLKTREKKFKPI 60

Query: 61  ADHLNAIHHLQDPINYPFKWSWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWE 120
           ADH+NA+HHLQDPINYPFKW+WRDVSIKVQNMRHQYLGVKQKIR+S+GDFNW+DGENHWE
Sbjct: 61  ADHVNAVHHLQDPINYPFKWTWRDVSIKVQNMRHQYLGVKQKIRISNGDFNWEDGENHWE 120

Query: 121 NFIKYKEVFGDVELELKDNKKAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEV 180
           NF+KYKEVFGDVELELK+NKK     FNEIG+FGGNGDDGLGLGLGFEIDCD+FE+  EV
Sbjct: 121 NFMKYKEVFGDVELELKENKK-----FNEIGYFGGNGDDGLGLGLGFEIDCDEFEENEEV 180

Query: 181 GEEEEEEEEREGGDFVCGEIEEI----EGNSEGLGKKLKKRRIAMLGARVLELRDVLVKR 240
           G+EEEE  +   GDFVCGEIEEI    EG SE LGKKLKKRRIAMLG+RV+ELRDVLVKR
Sbjct: 181 GDEEEEVGDC--GDFVCGEIEEIDGGGEGKSESLGKKLKKRRIAMLGSRVVELRDVLVKR 240

Query: 241 DEKRKEREYGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFD 300
           +E+RKERE+ RE+ +AAKEGG+ +ME  +EKRV EAEERVEERELELEEMQ++WARKE+D
Sbjct: 241 EERRKEREFAREDCVAAKEGGKREMENFKEKRVSEAEERVEERELELEEMQIRWARKEYD 300

Query: 301 RKLRLEREFDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQIL 360
           R+LRLERE DEER+WRMKMEEKREEEELEWRERML LQI+HEKQ MQMHADACQNQLQIL
Sbjct: 301 RQLRLERELDEERRWRMKMEEKREEEELEWRERMLGLQIDHEKQMMQMHADACQNQLQIL 360

Query: 361 GIMARFMCQFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           GIMARFMCQFFGSA DGLGGGL GLPPQ+LQNLQHPG GDLGD SKP SNSPPEFI
Sbjct: 361 GIMARFMCQFFGSAADGLGGGLGGLPPQILQNLQHPGPGDLGDISKPDSNSPPEFI 409

BLAST of Spo00552.1 vs. NCBI nr
Match: gi|870867767|gb|KMT18636.1| (hypothetical protein BVRB_2g027650 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 631.7 bits (1628), Expect = 8.800e-178
Identity = 328/396 (82.83%), Postives = 363/396 (91.67%), Query Frame = 1

		  

Query: 19  MKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIADHLNAIHHLQDPINYPFKW 78
           MKRKKWSE EEKTLL++Y+ELQ+SGTL+KLKTREKKFKPIADH+NA+HHLQDPINYPFKW
Sbjct: 1   MKRKKWSELEEKTLLSRYSELQNSGTLAKLKTREKKFKPIADHVNAVHHLQDPINYPFKW 60

Query: 79  SWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENFIKYKEVFGDVELELKDNK 138
           +WRDVSIKVQNMRHQYLGVKQKIR+S+GDFNW+DGENHWENF+KYKEVFGDVELELK+NK
Sbjct: 61  TWRDVSIKVQNMRHQYLGVKQKIRISNGDFNWEDGENHWENFMKYKEVFGDVELELKENK 120

Query: 139 KAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGEEEEEEEEREGGDFVCGEI 198
           K     FNEIG+FGGNGDDGLGLGLGFEIDCD+FE+  EVG+EEEE  +   GDFVCGEI
Sbjct: 121 K-----FNEIGYFGGNGDDGLGLGLGFEIDCDEFEENEEVGDEEEEVGDC--GDFVCGEI 180

Query: 199 EEI----EGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKEREYGREEVLAAKEG 258
           EEI    EG SE LGKKLKKRRIAMLG+RV+ELRDVLVKR+E+RKERE+ RE+ +AAKEG
Sbjct: 181 EEIDGGGEGKSESLGKKLKKRRIAMLGSRVVELRDVLVKREERRKEREFAREDCVAAKEG 240

Query: 259 GRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLEREFDEERQWRMKME 318
           G+ +ME  +EKRV EAEERVEERELELEEMQ++WARKE+DR+LRLERE DEER+WRMKME
Sbjct: 241 GKREMENFKEKRVSEAEERVEERELELEEMQIRWARKEYDRQLRLERELDEERRWRMKME 300

Query: 319 EKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARFMCQFFGSAGDGLGG 378
           EKREEEELEWRERML LQI+HEKQ MQMHADACQNQLQILGIMARFMCQFFGSA DGLGG
Sbjct: 301 EKREEEELEWRERMLGLQIDHEKQMMQMHADACQNQLQILGIMARFMCQFFGSAADGLGG 360

Query: 379 GLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           GL GLPPQ+LQNLQHPG GDLGD SKP SNSPPEFI
Sbjct: 361 GLGGLPPQILQNLQHPGPGDLGDISKPDSNSPPEFI 389

BLAST of Spo00552.1 vs. NCBI nr
Match: gi|731417532|ref|XP_010660334.1| (PREDICTED: stress response protein NST1-like [Vitis vinifera])

HSP 1 Score: 464.2 bits (1193), Expect = 2.400e-127
Identity = 254/399 (63.66%), Postives = 311/399 (77.94%), Query Frame = 1

		  

Query: 19  MKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIADHLNAIHHLQDPINYPFKW 78
           MKRKKWSE EE+TLLTKY+EL +SGTL+KLKTREKKFKPIADH+N++HHL DPI +PFKW
Sbjct: 1   MKRKKWSEVEEQTLLTKYSELLTSGTLAKLKTREKKFKPIADHVNSVHHLHDPITFPFKW 60

Query: 79  SWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENFIKYKEVFGDVELELKDNK 138
           SWRDVSIKVQNMRHQYLGVKQKIRVS+ +FNW DGENHWENF+KYKEVFGDVELE K+ K
Sbjct: 61  SWRDVSIKVQNMRHQYLGVKQKIRVSEDEFNWKDGENHWENFLKYKEVFGDVELEAKEKK 120

Query: 139 KAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGEEEEEEEE--REGGDFVCG 198
             G    +++G F    DD   LGLGF IDC+D ++  E  ++E+ ++E   +G +   G
Sbjct: 121 LGG----DDVGLF----DDSGVLGLGFGIDCEDLDEDDEEEDDEDVDDELGEDGSEGDFG 180

Query: 199 EIEEIEGNSEGLGKKLKK-----RRIAMLGARVLELRDVLVKRDEKRKEREYGREEVLAA 258
               ++       KK K+     RR  ++G++VLELRDV+V+R+++R+ERE+GRE+  A 
Sbjct: 181 GERRVDDLGSVRAKKFKRGFGFGRRFGLVGSQVLELRDVVVRREDRRREREFGREKGAAE 240

Query: 259 KEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLEREFDEERQWRM 318
           K   +M+ E  REKR  E +E VE RE ELEE Q+ WAR+E DR+LRLE+EFD ER+ RM
Sbjct: 241 KAEAKMEAENRREKRRSEKDEGVEMREWELEERQMIWARRELDRRLRLEQEFDGERRRRM 300

Query: 319 KMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARFMCQFFGSAGDG 378
           +MEEKREEEE+EWRERM+ LQIEHEKQ MQMHADACQNQ+QILG+MAR +CQFFGSA DG
Sbjct: 301 RMEEKREEEEMEWRERMMGLQIEHEKQMMQMHADACQNQMQILGVMARLVCQFFGSANDG 360

Query: 379 LGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           LGGGL  LPPQVLQNLQHP    LGDN KP +NSP +F+
Sbjct: 361 LGGGLGALPPQVLQNLQHP--VGLGDNGKPDANSPSQFM 389

BLAST of Spo00552.1 vs. NCBI nr
Match: gi|147770239|emb|CAN73956.1| (hypothetical protein VITISV_026134 [Vitis vinifera])

HSP 1 Score: 463.4 bits (1191), Expect = 4.200e-127
Identity = 254/399 (63.66%), Postives = 310/399 (77.69%), Query Frame = 1

		  

Query: 19  MKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIADHLNAIHHLQDPINYPFKW 78
           MKRKKWSE EE+TLLTKY+EL +SGTL+KLKTREKKFKPIADH+N++HHL DPI +PFKW
Sbjct: 1   MKRKKWSEVEEQTLLTKYSELLTSGTLAKLKTREKKFKPIADHVNSVHHLHDPITFPFKW 60

Query: 79  SWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENFIKYKEVFGDVELELKDNK 138
           SWRDVSIKVQNMRHQYLGVKQKIRVS+ +FNW DGENHWENF+KYKEVFGDVELE K+ K
Sbjct: 61  SWRDVSIKVQNMRHQYLGVKQKIRVSEDEFNWKDGENHWENFLKYKEVFGDVELEAKEKK 120

Query: 139 KAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGEEEEEEEE--REGGDFVCG 198
             G    +++G F    DD   LGLGF IDC+D ++  E  ++E+ ++E   +G +   G
Sbjct: 121 LGG----DDVGLF----DDSGVLGLGFGIDCEDLDEDDEEEDDEDVDDELGEDGSEGDFG 180

Query: 199 EIEEIEGNSEGLGKKLKK-----RRIAMLGARVLELRDVLVKRDEKRKEREYGREEVLAA 258
               ++       KK K+     RR  ++G++VLELRDV+V+R+++R+ERE+GRE+  A 
Sbjct: 181 GERRVDDLGSVRAKKFKRGFGFGRRFGLVGSQVLELRDVVVRREDRRREREFGREKGAAE 240

Query: 259 KEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLEREFDEERQWRM 318
           K   +M+ E  REKR  E +E VE RE ELEE Q+ WAR+E DR+LRLE EFD ER+ RM
Sbjct: 241 KAEAKMEAENRREKRRSEKDEGVEMREWELEERQMIWARRELDRRLRLEXEFDGERRRRM 300

Query: 319 KMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARFMCQFFGSAGDG 378
           +MEEKREEEE+EWRERM+ LQIEHEKQ MQMHADACQNQ+QILG+MAR +CQFFGSA DG
Sbjct: 301 RMEEKREEEEMEWRERMMGLQIEHEKQMMQMHADACQNQMQILGVMARLVCQFFGSANDG 360

Query: 379 LGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           LGGGL  LPPQVLQNLQHP    LGDN KP +NSP +F+
Sbjct: 361 LGGGLGALPPQVLQNLQHP--VGLGDNGKPDANSPSQFM 389

BLAST of Spo00552.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R944_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093110 PE=4 SV=1)

HSP 1 Score: 792.0 bits (2044), Expect = 3.600e-226
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 1

		  

Query: 1   MRDQNLHFRAQRHSFTKTMKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIAD 60
           MRDQNLHFRAQRHSFTKTMKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIAD
Sbjct: 1   MRDQNLHFRAQRHSFTKTMKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIAD 60

Query: 61  HLNAIHHLQDPINYPFKWSWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENF 120
           HLNAIHHLQDPINYPFKWSWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENF
Sbjct: 61  HLNAIHHLQDPINYPFKWSWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENF 120

Query: 121 IKYKEVFGDVELELKDNKKAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGE 180
           IKYKEVFGDVELELKDNKKAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGE
Sbjct: 121 IKYKEVFGDVELELKDNKKAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGE 180

Query: 181 EEEEEEEREGGDFVCGEIEEIEGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKE 240
           EEEEEEEREGGDFVCGEIEEIEGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKE
Sbjct: 181 EEEEEEEREGGDFVCGEIEEIEGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKE 240

Query: 241 REYGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLE 300
           REYGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLE
Sbjct: 241 REYGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLE 300

Query: 301 REFDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARF 360
           REFDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARF
Sbjct: 301 REFDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARF 360

Query: 361 MCQFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           MCQFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI
Sbjct: 361 MCQFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 410

BLAST of Spo00552.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FSE4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g027650 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 6.200e-178
Identity = 328/396 (82.83%), Postives = 363/396 (91.67%), Query Frame = 1

		  

Query: 19  MKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIADHLNAIHHLQDPINYPFKW 78
           MKRKKWSE EEKTLL++Y+ELQ+SGTL+KLKTREKKFKPIADH+NA+HHLQDPINYPFKW
Sbjct: 1   MKRKKWSELEEKTLLSRYSELQNSGTLAKLKTREKKFKPIADHVNAVHHLQDPINYPFKW 60

Query: 79  SWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENFIKYKEVFGDVELELKDNK 138
           +WRDVSIKVQNMRHQYLGVKQKIR+S+GDFNW+DGENHWENF+KYKEVFGDVELELK+NK
Sbjct: 61  TWRDVSIKVQNMRHQYLGVKQKIRISNGDFNWEDGENHWENFMKYKEVFGDVELELKENK 120

Query: 139 KAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGEEEEEEEEREGGDFVCGEI 198
           K     FNEIG+FGGNGDDGLGLGLGFEIDCD+FE+  EVG+EEEE  +   GDFVCGEI
Sbjct: 121 K-----FNEIGYFGGNGDDGLGLGLGFEIDCDEFEENEEVGDEEEEVGDC--GDFVCGEI 180

Query: 199 EEI----EGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKEREYGREEVLAAKEG 258
           EEI    EG SE LGKKLKKRRIAMLG+RV+ELRDVLVKR+E+RKERE+ RE+ +AAKEG
Sbjct: 181 EEIDGGGEGKSESLGKKLKKRRIAMLGSRVVELRDVLVKREERRKEREFAREDCVAAKEG 240

Query: 259 GRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLEREFDEERQWRMKME 318
           G+ +ME  +EKRV EAEERVEERELELEEMQ++WARKE+DR+LRLERE DEER+WRMKME
Sbjct: 241 GKREMENFKEKRVSEAEERVEERELELEEMQIRWARKEYDRQLRLERELDEERRWRMKME 300

Query: 319 EKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARFMCQFFGSAGDGLGG 378
           EKREEEELEWRERML LQI+HEKQ MQMHADACQNQLQILGIMARFMCQFFGSA DGLGG
Sbjct: 301 EKREEEELEWRERMLGLQIDHEKQMMQMHADACQNQLQILGIMARFMCQFFGSAADGLGG 360

Query: 379 GLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           GL GLPPQ+LQNLQHPG GDLGD SKP SNSPPEFI
Sbjct: 361 GLGGLPPQILQNLQHPGPGDLGDISKPDSNSPPEFI 389

BLAST of Spo00552.1 vs. UniProtKB/TrEMBL
Match: A5AZL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026134 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 2.900e-127
Identity = 254/399 (63.66%), Postives = 310/399 (77.69%), Query Frame = 1

		  

Query: 19  MKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIADHLNAIHHLQDPINYPFKW 78
           MKRKKWSE EE+TLLTKY+EL +SGTL+KLKTREKKFKPIADH+N++HHL DPI +PFKW
Sbjct: 1   MKRKKWSEVEEQTLLTKYSELLTSGTLAKLKTREKKFKPIADHVNSVHHLHDPITFPFKW 60

Query: 79  SWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENFIKYKEVFGDVELELKDNK 138
           SWRDVSIKVQNMRHQYLGVKQKIRVS+ +FNW DGENHWENF+KYKEVFGDVELE K+ K
Sbjct: 61  SWRDVSIKVQNMRHQYLGVKQKIRVSEDEFNWKDGENHWENFLKYKEVFGDVELEAKEKK 120

Query: 139 KAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGEEEEEEEE--REGGDFVCG 198
             G    +++G F    DD   LGLGF IDC+D ++  E  ++E+ ++E   +G +   G
Sbjct: 121 LGG----DDVGLF----DDSGVLGLGFGIDCEDLDEDDEEEDDEDVDDELGEDGSEGDFG 180

Query: 199 EIEEIEGNSEGLGKKLKK-----RRIAMLGARVLELRDVLVKRDEKRKEREYGREEVLAA 258
               ++       KK K+     RR  ++G++VLELRDV+V+R+++R+ERE+GRE+  A 
Sbjct: 181 GERRVDDLGSVRAKKFKRGFGFGRRFGLVGSQVLELRDVVVRREDRRREREFGREKGAAE 240

Query: 259 KEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLEREFDEERQWRM 318
           K   +M+ E  REKR  E +E VE RE ELEE Q+ WAR+E DR+LRLE EFD ER+ RM
Sbjct: 241 KAEAKMEAENRREKRRSEKDEGVEMREWELEERQMIWARRELDRRLRLEXEFDGERRRRM 300

Query: 319 KMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARFMCQFFGSAGDG 378
           +MEEKREEEE+EWRERM+ LQIEHEKQ MQMHADACQNQ+QILG+MAR +CQFFGSA DG
Sbjct: 301 RMEEKREEEEMEWRERMMGLQIEHEKQMMQMHADACQNQMQILGVMARLVCQFFGSANDG 360

Query: 379 LGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           LGGGL  LPPQVLQNLQHP    LGDN KP +NSP +F+
Sbjct: 361 LGGGLGALPPQVLQNLQHP--VGLGDNGKPDANSPSQFM 389

BLAST of Spo00552.1 vs. UniProtKB/TrEMBL
Match: B9H398_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s08640g PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 1.800e-124
Identity = 256/409 (62.59%), Postives = 309/409 (75.55%), Query Frame = 1

		  

Query: 19  MKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIADHLNAIHHLQDPINYPFKW 78
           MKRKKWSE EE+TLL+KY++L +SGTLSKLKTREKKF+PIADH+N IHHLQDPI YPFKW
Sbjct: 1   MKRKKWSELEEQTLLSKYSDLLTSGTLSKLKTREKKFRPIADHVNTIHHLQDPIGYPFKW 60

Query: 79  SWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENFIKYKEVFGDVELELKDNK 138
           SWRDVSIKVQNMRHQYLGVKQKIR+S  +FNW DGENHWENF+KYKEVFGDVELE+K  K
Sbjct: 61  SWRDVSIKVQNMRHQYLGVKQKIRISKDEFNWKDGENHWENFLKYKEVFGDVELEVKSKK 120

Query: 139 KAGIGDFNEIGFFGGNGDDGLGLGLGFEIDCDDFEDGGEVGEEEEEEEE---------RE 198
            +G GD +    F   GD      LGF ID +D+ +  +  EE+ EEEE           
Sbjct: 121 SSGSGDSD---LFKDCGD------LGFGIDSEDYLEEDDQEEEDGEEEEDVNGDGGNDNV 180

Query: 199 GGDFVCGEIEEIEGNSE-GLGKKLK-------KRRIAMLGARVLELRDVLVKRDEKRKER 258
           GG    GE    +GN E G+G+K K        RR+ +LGA+V++LRDV+++R+EKR+ER
Sbjct: 181 GGGEEDGEFRGEKGNGEMGIGRKEKMKKGLGGNRRLGLLGAQVMDLRDVVLRREEKRRER 240

Query: 259 EYGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLER 318
           E+  E+ +   E  R ++E  R+    E EERVE  E+ELEE +L WAR+EF+R+ R+ER
Sbjct: 241 EFNGEKSVLESEKRRRELEYRRDMWRSEKEERVENWEMELEERELMWARREFERRERVER 300

Query: 319 EFDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARFM 378
           E DEER+ R  MEEKREEEE+EWRERML +QIEHEK  MQ+HADACQNQ+QILG+MARF+
Sbjct: 301 ELDEERRKRRLMEEKREEEEMEWRERMLGMQIEHEKAMMQIHADACQNQMQILGVMARFI 360

Query: 379 CQFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           CQFFGSA DGLGGGL GLPPQVLQNLQHP  G LGD+ KP +NSP EF+
Sbjct: 361 CQFFGSANDGLGGGLGGLPPQVLQNLQHP--GGLGDSGKPDANSPSEFM 398

BLAST of Spo00552.1 vs. UniProtKB/TrEMBL
Match: A0A061FRU0_THECC (Receptor-type tyrosine-protein phosphatase U OS=Theobroma cacao GN=TCM_045444 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 9.700e-123
Identity = 255/408 (62.50%), Postives = 305/408 (74.75%), Query Frame = 1

		  

Query: 19  MKRKKWSEFEEKTLLTKYAELQSSGTLSKLKTREKKFKPIADHLNAIHHLQDPINYPFKW 78
           MKRKKWSE EE+TLL+KY++L +SGTLSKLKTREKKFKPIADH+N++HHLQDPI +PFKW
Sbjct: 1   MKRKKWSELEEQTLLSKYSDLLNSGTLSKLKTREKKFKPIADHVNSVHHLQDPITFPFKW 60

Query: 79  SWRDVSIKVQNMRHQYLGVKQKIRVSDGDFNWDDGENHWENFIKYKEVFGDVELELKDNK 138
           SWRDVSIKVQNMRHQYLGVKQKIR+S  +FNW DGENHWENF+KYKEVFGDVELE+K  K
Sbjct: 61  SWRDVSIKVQNMRHQYLGVKQKIRISKDEFNWKDGENHWENFLKYKEVFGDVELEVKGKK 120

Query: 139 KAGIGDFNEIGFFGGNGDDGLG--LGLGFEIDCDDFE------------DGGEVGEEEEE 198
            +            GNG D       LGFEID +DFE            DG + GEE+  
Sbjct: 121 GSESN---------GNGSDLFEDCCDLGFEIDSEDFEEEEEDDGVDGDGDGDDGGEEKVG 180

Query: 199 EEEREGGDFVCGE--IEEIEGNSEGLGKKLKKRRIAMLGARVLELRDVLVKRDEKRKERE 258
            E   GG+   G+  I  +  + +GLG     +   +LG +VLELRDV+V+R+EKRKERE
Sbjct: 181 SEGEFGGEREFGDVGISRVRKSRKGLGGS---KGFGLLGTQVLELRDVVVRREEKRKERE 240

Query: 259 YGREEVLAAKEGGRMDMEILREKRVREAEERVEERELELEEMQLKWARKEFDRKLRLERE 318
           + RE+    +E  R ++E  +EKR  E EERVE+RE+ELEE +L WAR+E DR+LRLE+E
Sbjct: 241 FVREKGEMEREQKRRELEFGKEKRWSEREERVEDREMELEERELVWARREGDRRLRLEKE 300

Query: 319 FDEERQWRMKMEEKREEEELEWRERMLSLQIEHEKQTMQMHADACQNQLQILGIMARFMC 378
            DEER+ R +MEEKREEEE++W+ER++ LQIEHEK  MQMH DACQNQ+QILG+MAR  C
Sbjct: 301 LDEERRRRRRMEEKREEEEMDWKERLVGLQIEHEKTMMQMHMDACQNQMQILGVMARLFC 360

Query: 379 QFFGSAGDGLGGGLSGLPPQVLQNLQHPGQGDLGDNSKPGSNSPPEFI 411
           QF+GSA DGLG GL GLPPQVLQNLQHP  G LGDN KP SNSP EFI
Sbjct: 361 QFYGSANDGLGAGLGGLPPQVLQNLQHP--GGLGDNVKPDSNSPSEFI 394

The following BLAST results are available for this feature:
BLAST of Spo00552.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902208678|gb|KNA16010.1|5.1e-226100.hypothetical protein SOVF_0931... [more]
gi|731315998|ref|XP_010693807.1|1.8e-18381.7PREDICTED: uncharacterized pro... [more]
gi|870867767|gb|KMT18636.1|8.8e-17882.8hypothetical protein BVRB_2g02... [more]
gi|731417532|ref|XP_010660334.1|2.4e-12763.6PREDICTED: stress response pro... [more]
gi|147770239|emb|CAN73956.1|4.2e-12763.6hypothetical protein VITISV_02... [more]
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BLAST of Spo00552.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R944_SPIOL3.6e-226100.Uncharacterized protein OS=Spi... [more]
A0A0J8FSE4_BETVU6.2e-17882.8Uncharacterized protein OS=Bet... [more]
A5AZL6_VITVI2.9e-12763.6Putative uncharacterized prote... [more]
B9H398_POPTR1.8e-12462.5Uncharacterized protein OS=Pop... [more]
A0A061FRU0_THECC9.7e-12362.5Receptor-type tyrosine-protein... [more]
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BLAST of Spo00552.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00552.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 267..287
scor
NoneNo IPR availablePANTHERPTHR37076FAMILY NOT NAMEDcoord: 17..410
score: 1.2E
NoneNo IPR availablePANTHERPTHR37076:SF2SUBFAMILY NOT NAMEDcoord: 17..410
score: 1.2E

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo099400.74Barchart | Table
Spo051270.72Barchart | Table
Spo236640.72Barchart | Table
Spo179590.71Barchart | Table
Spo054870.70Barchart | Table
Spo066810.70Barchart | Table
Spo018400.70Barchart | Table
Spo173290.70Barchart | Table
Spo270040.69Barchart | Table
Spo195580.69Barchart | Table
Spo240660.69Barchart | Table
Spo204970.68Barchart | Table
Spo055570.68Barchart | Table
Spo261900.68Barchart | Table
Spo148490.68Barchart | Table
Spo006940.67Barchart | Table
Spo008120.67Barchart | Table
Spo013970.67Barchart | Table
Spo027470.67Barchart | Table
Spo066730.67Barchart | Table
Spo071840.67Barchart | Table
Spo101560.67Barchart | Table
Spo112960.67Barchart | Table
Spo119180.67Barchart | Table
Spo122010.67Barchart | Table
Spo126630.67Barchart | Table
Spo156300.67Barchart | Table
Spo195990.67Barchart | Table
Spo110950.66Barchart | Table
Spo258510.66Barchart | Table
Spo010970.66Barchart | Table
Spo123400.66Barchart | Table
Spo126230.66Barchart | Table
Spo263580.66Barchart | Table
Spo139530.66Barchart | Table
Spo140080.66Barchart | Table
Spo064640.66Barchart | Table
Spo152700.66Barchart | Table
Spo266460.66Barchart | Table
Spo173860.66Barchart | Table
Spo177550.66Barchart | Table
Spo037160.66Barchart | Table
Spo182690.66Barchart | Table
Spo010690.66Barchart | Table
Spo235270.66Barchart | Table
Spo021150.66Barchart | Table
Spo067260.66Barchart | Table
Spo237510.66Barchart | Table
Spo099490.66Barchart | Table
Spo196350.65Barchart | Table
Spo144540.65Barchart | Table
Spo199650.65Barchart | Table
Spo024070.65Barchart | Table
Spo154200.65Barchart | Table
Spo211320.65Barchart | Table
Spo049230.65Barchart | Table
Spo098030.65Barchart | Table
Spo173910.65Barchart | Table
Spo064650.65Barchart | Table
Spo242550.65Barchart | Table
Spo020850.65Barchart | Table
Spo029840.65Barchart | Table
Spo085400.65Barchart | Table