Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTCATGCACGTGTTGGCTCGACGTACAATTATAATTTTGATTACTTGTATTAATTAATTAAGGTTTTTTCTATAACATAAAAGACACAGTTTTTTAACTGTTTACATAAAAAATAATCAAGATTGTAAGTTTATTTAATTTCGCTAGTTATAAATAATACTCCCTCCGTCCCTTAATACTCGACCTGTTTTCCTTATCGGGTCGTCCCTTAATACTTGACCTGTTTCTAAAAATGGAAATCTTCTACCAATATTATATTATTTCTCACTCCCCCCTATTAACACACCTACCCCCTACTCCATACAAAAAATAATAAAAAATTCAACACCCCCCTCTACCCCTTTACACATTTCCCACTAACTACATTAAAATAATACCCCGCTATTAACTACTACCTATTAAACTAATAAGTCAATTCAAGTCCCTTAAACTCTGTGCCGGTCAAACCGGGTCGAGTATTAAGGGACGGAGGGAGTACCTCAAAACTAACATAAGAACTTCCTACATTACATTGATAGTTAATTAATTACAGCTTTCCTGGATGAACTCTTATCTAAAACTGAGTAAACTACTACCAATCTACTACCAATCTATCATACTTCCCCGGTTTCCTAAATATAGCAGCATTTGAATTTTTACACTATTCATAATGGACATTTGGTTATTTTTTGTGATTAGTACGTATGAAAAATTGTAGGCATTGCGTTCTTATTAGTTTAGTATCAATATATATTTTCTAAAGCTATTGCTACTCAGTTTCACTTTACATGATCAATCCGGTCCCAGAAAAGACCATGGGCTACCACCATGAACCCCAACACCTGTTTGTCCGTCACTTCAGACGTGCACAGTCTAAAGCTATTGCTACTTAGTTTCACTTTACATGATTAAAACTCTATTATGACTCAACAATCACATAAGTCATATACAATCAACAATTATTCACAACAGTTTTTATCTTGGAATTAAGTAAGTGATCACAAGGGTATCAATCAAGACTCATTCCAATTAATTCAACCTTTCCTTTAACAATGATCAACCCCTGTATATGGGTATAAGGTTTCAACTTACTAACAAGGTCCTCGGCCCTCATAAAGTAGTGAAAAGCTAAAAAGGAACAACGATCAATCGATCTAAACCAATATATATAAAATAATCTAGTGTTCCCAACCAACATGTTTGCATCAATCATCTATACTAACATGCTATAATTCTCATAACGAAATATATGTTCAACATGTTCATCCAACAATATTAAACATGTAAATTTCAACATAACCAAGTTCATCGACAACAACATGGTTTCAATAATAACACACATCTCCAAGCACACAGGTATGTACGTACCTTGTGTAATAAATTGATAGGCCACTTTAACGATTACAAAAGTCGTCTACACAGAATTCTCCGCCTAAAACAACCAATAAAGGTTCTCAATCAACTTCCAGTAATTCACAGCAATAATCAAGTATTCTAAATACATCCTAAACATATTTAGAACATTCCTCAACATCCAAACTTAACTACTAAATCTCCTAGCATAGTGATTACTTCACTAACGATCACGAATTATCACAAATTTCAATATAACACGAATTTACAATTTCCAGCAATATAAAATAGTTTCAAACTACTCCAAAATATATCCAACATGCTTAAAATCATAAAAATAATAACTTTCATAATTTATAATCATCCTAAAATGATTTTAAAACTATTAAAACCTTGAAAATTCATGCTTTAATAATTAAAATTCTTATTCCAATTCAATTATATAATCTGAAAATTAATAATTTAATTATGCAAAACATAAAATCTGAATTTCATAATTGACTCATAAAATCTATAATTTAATTCAAGAAAAACATGAATTATATTAATAAATATAAATTAAAACATTAATTAGTTTTAAGGGTTTGAGAAATAACCAAAAGTGAGGGAGAGAAGGCTGGCTGGCTGGCCGGAGGTGGTGCTGCGGCGCGGAGGCACGATGGCAATGCGAGAGCAGGTTGACGGTGGCGGCAGTCGGCTGGTGGTGCGGCTGACTTGCGCAAGAAACAAGCAGGGAAAGGGAGGATTTCCACGCGAAGGAGGAGAGAGAAGAGGGTGTCGGCTGAGCAGGGCAGCGACGACGATTCAAGTGGTGGTTGTGGCTGGCCTGGTGGTCGCGGCTGCGTACGCGGTGGCTGTCGTTGGTTCAAGCAAACAGAAACGAGTTGAGCAGGAGATAAAACGAACGCAAGAAAAAAAAACAAAAGAGAAGAGAACGACGAGAGGGGAGAGGAGGAGGAGGAGTACCGTGCAGAGGGGGGCCGGTGGCGCGTGCTGCGGCGGTCCGGCGGCGTGAGCAGTAGCAGCAAGGGGAAGCAGGGGTTTTTGGTGGTTTATTTTATTTCACGTGAGATTGAAAAGGGAAGGGAGGAGAGTGTTTTGGGCTTTATTATTTTGGGCTAGGAGTAGGATTAAGTTTGTTTGAATCCAAAACGGTTATGATTGATTATCCAAATTCAATTGAACGTGTTTTCGTAATTTGAATTATTTTCAACATAAAATTCTAAAATTATTTTTTTCATAAATCGTTGAAATATTTAAAACGTATAAAACTAAATATTCGTTATTTACATATTTATTTCTAAAATTCGTAAATTCTATTTAAATATAATTAACTATACGTTAAAATATATTAATAAAATGTATAAAATTACGAGGATTACACCCGCGTAACGCAGCAGCACACAGACACGCAAGCACGCCCATGTGCACGAGTAGTGCTAGTCCCTGCCTCGCTGCTTGTGCGCTTAGCCAGCGCGCGCGGGCACGCCAGCTCTCTTGCTGGTGCCGCTTCGGTGAGCCTTGCGTGCTGCGTGCACGAGGCTCGCCCGTAGGCTTAGCCCAACCATTGCACATTGTCGCACACATTCAGATGACACGCCAAGCCCATGTTCATGCCAGTGTTGGCTCGCTGCTCCTGCCCTTGTGTCGTTGCATGCGCGCTAGGGATGGCAATTCAATCCGACTCCGATCCGAATCCGACCCGATTTGAAGAAAAAACTCCGCTCCGAATCCGAAATAAAATAATCCGAATCCGAATCCGAAAAAATAACTCCGAGTCCGAATGGGAGTCGGATCGGATATGGATCCTGCGTGACATCCGACCCGACTCCGACCCGACTCCGACCCGCTAGCTTTAACAGTAATAATTCATTTTCCCTTGTAATATATAAAAGCAAACCCTAATTTCCAACTCCCTCATCCACCGCCTAATCTAACTCTCTCTCCTTCCCACTTCTACAGCCCCCCTCAGAAATTAGAAACTACGGAGTATCAAAGATTCAAAGTAGCCCCTGCTCCATCTCCATAGAAATCATCCAGCATCTCGACCTCCACTAAAAACTCTTTCAAAGGACTCTCTCTCTCCTCTCTACTCCATCTTTCTTATAAATTCGACCACCATCGCCGCCTTCCACCATCGCCGCCTTCCACTAGGTGTTGCGGTTTTCGATTTCAATCGGTCTTCTTGTGATGATTTATGGTTTGAATTAATTGTTAAAGGTATGGTCGATTTAGTTATATATTGGGCTAGATTTATAGGTGTATGGTTACTTCATTAATTCGTTATATGAATCTTTTAATTATTGATTTCTTGTACTCTCTTAATTAGAATTCCAGGATATAGATTTGTAGTTGTTCATTTTTGTAATCAATTTAAGTGTAATTTATTTAACCGATGGGAATAATATATGCAATCAACTTGGATTATTTCTAGTTTTATTTTATATGAGCAAGGTTTAAATTTAAGAATCATATGTACTATGTATTTGTTCATCGTCTTTAACGCATTTCTTTTTTGTTGGAAAATTTTAAGAAAAATGTTGCAGAAGCGTTCAAATTGATTAGGATGGATTCGGATCTCGTCGGAGGTCCGACTGATCGGGTCGGATTCGGACCTTCAAAATGAGTATTCGGATCGGACTCGGGTTTCGGAGTTTCGGACTCGGATTCGGATTCGGATCCATTTTTAGCATCCGATTAGTAAATGGATCGGATTCGGATCTTGCTGCATCCGACCCGAGTCCGATCCATTGCCATCCCTAATGCGCGCGCCACAGCCATGGCACCGGGCCTTGTTGTGTGCACCACAAGCACATGGACAACAGCCATCGCCCTCGTGCGAGTGGCTTGCTCGTCCAATCGAACAACAAAATCCAATTCAATGTTACGAAACCAAATTTGGACGATTTAAACTTTTATAATTTTAACAATTCCAATTGTTTTTAATTACGAAAAATAATTAAAGTGGGTGATTATTCAACTCAATCTGAAGGCTGCGAGTTGCTGCATTAACTACATTGTCACAAGGCAGCACAACTGATACAGCCTTGATCTCCAAATTGGCACAGTTGTTTCTTTATGTGAGCAAGTATCAGAATGGTAAGGCATTGAAGCCTCTTCCAGCTGCAGTTATTGCTGGTGATGCACCTCAAAGTTGTACGACTGACAAAGTTTATGGTACTCATTCAAAAATCCTTTCCGAAGGTAATGTTTTTCACACCTTGTCATTATTATTTTGTTTCCTATCTCCTTCCCTCCCACTTTTATCATTCCTTTTGTATTCACGTATTAGTCTTCTAATGTCAGGAAATACGGACTTTGGCAACTATGCATTCCTGCATAATGAATTTCGTAGAGAAGATAATGACAATAGCTTGTCCATTGATCTGCTGGAAGATTTCACTGATTCTATTGTCCCAGATGAAAATCCTGTTGATGATCCAGTATCTCGGTTTATGGAAGCAGTGCCATCATCTGTAGGAAGATCACCTGGTGATCCACCAGAACTCTATCTTCCAGGCCTTGTTATACACTTAATCAAAAGACAAAGGACCACTACTTTCCCTCTTTTCAAAGGTTGGGGAGCTCAAGGAACGGAACCACGATATAGAGCAGTCATAGCTGACCGCCAAAATTTTAAGGAGATACTCATTTCACCCAATATGTTCCTCGATCATCTTCCCTGGCGGTATGCAAATGTTATTAATTGTTGTGAAATTAGCTTCTGGTAGAGTTTATCAAAACAATAAAAAGCGTCTGGTAGAGTAATCCTGTTTTATTTAGTTGTTTACTTCTGCTTTGTAATTTCAGATGCCATTATGCTTTGCAGAGAGTGTTGGAATCCCGGAAAGTGGAAATAAACCATGATGGCTTGCAAATGGTTTGAGCTCAGTATTTTCACCAGGGATAAGGAGCTCAGTATATTCATCATCATGGAAATAAACCTGAAACGTGAACAACGATGGTGCTTTCTTTACAGAACTACAGTTTCAGTTATTCTTTGCAGCATTATGTTGTGGCAAGGTGATTACCTGTTGTTATTCTGACTTAAAGGTACGGAGCTGAACACAGATTTTCTGTTTCCTCCGTTGGCTCAATACTGTAGTTTATGTATGACCTTCTAACATAATGTTTGGTCTCTTGTGTAAATAATCCATTCCTTTTGATATTTATGATAAAAGTTACCGGGTTCAGCAGAATTTTGTCCGCCATATCAGAGTANTTCCTTTTGATATTTATGATAAAAGTTACCGGGTTCAGCAGAATTTTGTCCGCCATATCAGAGTATATTTATAACATGTGAAGATTTTAATGTGTAA ATGTGTCATGCACGTGTTGGCTCGACGCTGCGAGTTGCTGCATTAACTACATTGTCACAAGGCAGCACAACTGATACAGCCTTGATCTCCAAATTGGCACAGTTGTTTCTTTATGTGAGCAAGTATCAGAATGGTAAGGCATTGAAGCCTCTTCCAGCTGCAGTTATTGCTGGTGATGCACCTCAAAGTTGTACGACTGACAAAGTTTATGGTACTCATTCAAAAATCCTTTCCGAAGGAAATACGGACTTTGGCAACTATGCATTCCTGCATAATGAATTTCGTAGAGAAGATAATGACAATAGCTTGTCCATTGATCTGCTGGAAGATTTCACTGATTCTATTGTCCCAGATGAAAATCCTGTTGATGATCCAGTATCTCGGTTTATGGAAGCAGTGCCATCATCTGTAGGAAGATCACCTGGTGATCCACCAGAACTCTATCTTCCAGGCCTTGTTATACACTTAATCAAAAGACAAAGGACCACTACTTTCCCTCTTTTCAAAGGTTGGGGAGCTCAAGGAACGGAACCACGATATAGAGCAGTCATAGCTGACCGCCAAAATTTTAAGGAGATACTCATTTCACCCAATATGTTCCTCGATCATCTTCCCTGGCGATGCCATTATGCTTTGCAGAGAGTGTTGGAATCCCGGAAAGTGGAAATAAACCATGATGGCTTGCAAATGTTACCGGGTTCAGCAGAATTTTGTCCGCCATATCAGAGTATATTTATAACATGTGAAGATTTTAATGTGTAA ATGTGTCATGCACGTGTTGGCTCGACGCTGCGAGTTGCTGCATTAACTACATTGTCACAAGGCAGCACAACTGATACAGCCTTGATCTCCAAATTGGCACAGTTGTTTCTTTATGTGAGCAAGTATCAGAATGGTAAGGCATTGAAGCCTCTTCCAGCTGCAGTTATTGCTGGTGATGCACCTCAAAGTTGTACGACTGACAAAGTTTATGGTACTCATTCAAAAATCCTTTCCGAAGGAAATACGGACTTTGGCAACTATGCATTCCTGCATAATGAATTTCGTAGAGAAGATAATGACAATAGCTTGTCCATTGATCTGCTGGAAGATTTCACTGATTCTATTGTCCCAGATGAAAATCCTGTTGATGATCCAGTATCTCGGTTTATGGAAGCAGTGCCATCATCTGTAGGAAGATCACCTGGTGATCCACCAGAACTCTATCTTCCAGGCCTTGTTATACACTTAATCAAAAGACAAAGGACCACTACTTTCCCTCTTTTCAAAGGTTGGGGAGCTCAAGGAACGGAACCACGATATAGAGCAGTCATAGCTGACCGCCAAAATTTTAAGGAGATACTCATTTCACCCAATATGTTCCTCGATCATCTTCCCTGGCGATGCCATTATGCTTTGCAGAGAGTGTTGGAATCCCGGAAAGTGGAAATAAACCATGATGGCTTGCAAATGTTACCGGGTTCAGCAGAATTTTGTCCGCCATATCAGAGTATATTTATAACATGTGAAGATTTTAATGTGTAA MCHARVGSTLRVAALTTLSQGSTTDTALISKLAQLFLYVSKYQNGKALKPLPAAVIAGDAPQSCTTDKVYGTHSKILSEGNTDFGNYAFLHNEFRREDNDNSLSIDLLEDFTDSIVPDENPVDDPVSRFMEAVPSSVGRSPGDPPELYLPGLVIHLIKRQRTTTFPLFKGWGAQGTEPRYRAVIADRQNFKEILISPNMFLDHLPWRCHYALQRVLESRKVEINHDGLQMLPGSAEFCPPYQSIFITCEDFNV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00580.1 vs. NCBI nr
Match: gi|902219647|gb|KNA18371.1| (hypothetical protein SOVF_071440 [Spinacia oleracea]) HSP 1 Score: 433.3 bits (1113), Expect = 2.800e-118 Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 1
BLAST of Spo00580.1 vs. NCBI nr
Match: gi|731334081|ref|XP_010678056.1| (PREDICTED: sn1-specific diacylglycerol lipase beta isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 325.1 bits (832), Expect = 1.100e-85 Identity = 161/220 (73.18%), Postives = 183/220 (83.18%), Query Frame = 1
BLAST of Spo00580.1 vs. NCBI nr
Match: gi|870859739|gb|KMT11140.1| (hypothetical protein BVRB_5g111280 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 325.1 bits (832), Expect = 1.100e-85 Identity = 161/220 (73.18%), Postives = 183/220 (83.18%), Query Frame = 1
BLAST of Spo00580.1 vs. NCBI nr
Match: gi|731334085|ref|XP_010678058.1| (PREDICTED: sn1-specific diacylglycerol lipase beta isoform X3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 325.1 bits (832), Expect = 1.100e-85 Identity = 161/220 (73.18%), Postives = 183/220 (83.18%), Query Frame = 1
BLAST of Spo00580.1 vs. NCBI nr
Match: gi|731334083|ref|XP_010678057.1| (PREDICTED: sn1-specific diacylglycerol lipase beta isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 185.7 bits (470), Expect = 1.000e-43 Identity = 83/107 (77.57%), Postives = 96/107 (89.72%), Query Frame = 1
BLAST of Spo00580.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFV2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_071440 PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 2.000e-118 Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 1
BLAST of Spo00580.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CBE7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g111280 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 7.600e-86 Identity = 161/220 (73.18%), Postives = 183/220 (83.18%), Query Frame = 1
BLAST of Spo00580.1 vs. UniProtKB/TrEMBL
Match: W9RYW4_9ROSA (Sn1-specific diacylglycerol lipase beta OS=Morus notabilis GN=L484_011035 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 5.500e-36 Identity = 101/227 (44.49%), Postives = 135/227 (59.47%), Query Frame = 1
BLAST of Spo00580.1 vs. UniProtKB/TrEMBL
Match: B9SYF0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0118640 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 6.800e-34 Identity = 89/220 (40.45%), Postives = 129/220 (58.64%), Query Frame = 1
BLAST of Spo00580.1 vs. UniProtKB/TrEMBL
Match: B9IAD3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14870g PE=4 SV=2) HSP 1 Score: 152.1 bits (383), Expect = 8.800e-34 Identity = 91/216 (42.13%), Postives = 128/216 (59.26%), Query Frame = 1
BLAST of Spo00580.1 vs. TAIR (Arabidopsis)
Match: AT1G05790.1 (lipase class 3 family protein) HSP 1 Score: 125.9 bits (315), Expect = 3.400e-29 Identity = 76/213 (35.68%), Postives = 113/213 (53.05%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00580.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00580.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00580.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo00580.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
Co-expression
|