Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCTGCAAAACCCTACCTCACCGTTTTCTCTCTCCTCTTCATCACCATCTTCTCCCTCTCAGAATCCTCAACTCCTCCTTCCGTCTTCGAAATTCTCCCCGAATTCGGCCTCCCAAGCGGTCTCTTGCCCAATTGCGTCCACAACTACACTCTCTCTCCTAAAGATGGTCGATTCACCGTTGACCTTGATACGAATTGCTATATTCAGTTCGATTACTTGGTTTACTACGAAAAACGCATCACCGGAACCCTAAAAATGGGGTCAATTACTGATTTGAAAGGGATTCAAGTCAAGCGACTCTTTCTGTGGTTTGATGTTGATGAAATTAAGGTGGATTTGCCTCCTTCTGATTCAATTTACTTTCATGTTGGTTTGATTAGCAAGAAGCTCAGTGTTCATCAGTTTGAAACTGTTCATTCTTGCCGTGCTTCCAATTCTCGTGGCCATCTTCGTTCTTGGAACCAAATGTTCGAGGTATAATTACTATTATCATCATTTATTGTCCTTGTTTCGATTTTAATTACGAATTTATTGATTCTTGATGCTGGTTATGTTACAGATTGTGAAATTCTATAGCTGAATTGAATGGATTGATTATATAATTTAGGGTTGACTTTGGTGGATGATTGTAGATCAATAAATTATTCAATTGCTAAGTTTATCTTTTGTTTATTGGTCAAATTTAGGTTGATTTTGTCAAATAATGAGGTAAAAGAACAGTCAAATCTAGGTGGATAAGATAAGATGTGAAATTGTTGTTATTGGTATGTCTACAATTGGCATCATTTGTTTTCTTAAGTAATCTTTTAAGGTTGCTTCTTTCTAATTCCATTCCATCAATGTTTGATTTCTGTTAAGCTAAATTTCACCCATGAAGTTGCCAATTGGAAATTGTAGAACCTGCTACATGTTGCTTGCCGGACTCTGCTGCGTGACTTGAAAATTTGTTATGTGTTCTTATACATTTAGGATTGGCGTTCTGCTAATGTTCAATCAACCCAATGCTATACTATTCTTAGTGACAGAAGTTTATAAATCCTGATCACTGTGTGTTGATAACTCTTGTTAGAACACAATAGTTGTTATTAGGAATTGAGAAGCATGTCTTCTGCTAGTCTTTCTTGCTCACATTTGGATATAATATGGGTTGGTGCTGAGGCTGGATTTTGTAGTATTTTCTGCTTAAACTTTTCGTGGCTACTTACTAGATTGTTTGGTGTTCGCATTACTGGTTGACTTGAGGACATTTTAATGTTGCTTATTTCTCATTTCTACTAGAGCAATATTTTGATCCGTGCTTATGGCCTAAAGTACTGAAATTTCCAATTGATGAACCTGTGTTTCATGTTACTCTCGGATGTGTTTAACTATGATTGCTCGTGATAGTATAGAGCCATGTGAGGTTAATGATACCGATAACTTGTTTAAATGTGCCAATGTTTTTGAAGGAAACCGTATACGTGGTAAAATACATCTTGTTTGTTTGCATAATGTGGATTGGCAATCCATCACCAAAAAGCTCAGATTATCCAATTCAGTATAATTGCTACTGTTGTATTTTTTTAATGCTGACAAAGACAGAACAACTCCACTCTTGATGATCTTTGAAATTCTTGTTAAAAACCTATAGCTTTTATCAGAAGTATGTCTCTTACTAACATTCCAAGGATGTGGGTTGGTACTCTTGGTAGTGACTAGTGAGGTCGATCATTTTTTTGTTACTTTCTGGTTGAAACTGCAAGGGACTTTGCTTTGGTAGTCTGTGTTGTTCTTGCATATTCTACTTGCATGAGAAAGTGCTCAATGAAAATTTTGCAAACCAACCTCCCGTTAAGGACTTGAAGTAAAAGACAGATTGATATGGTCAGTTAGGAGAATTGAAGCGAAGTTACCTTATTGAGCTCAAGTTTTCACTGGTGTTTCAGAACTTAATGCATAGATATCAATGGTTATTTTAGTATTGACAGATTGACAATACTGCCTTGCATAATCAATTACGGTAAAGAACTAACTGAGCGGTGCTGATTATTGAAAACAAGGCTATACAACTCCACTGTTCTAAAAAAATTAAAGCCTAGTTACCTTATCATTGATTTGTACTGATAATGGACATTAGACTTCAGTTGATGCACTTAAGCTCCGTTTCATAAGGTGTAAAACGTTTTCATGGAAAACGATTTCCCCCTTTTCAATCATTTTACGTCGTTTGGTTGGGCAAGGGATGGAAAACAATTTTCCGTAACTCCATTTGAAAGAGAGGGAAACCCCTTTTTCTTTTTACCTCCCTCTCCTTTCTTCCCCTCAATCTTCACCATCTTCTCCCATTTTCTTTAAGGAACCAAACAAGGAAAACTAGTTTGGAATTGTGTTTTCCCTTGGAAAATCATGTTACAATGAAAAACATTTTACACCAAACCAAACAGAGCCTTATTGTTGCGTTGTATACATCTGCTACTTCTGTATGGTTAACAGTAGTTGTTTGTTTGCATTAATCAGCTTAATCTCTGTTGTACTGCTTTGCTTAACAAAATCACTCTCTAATCTCTTTACCTTCTTCTGATCTGCAGCTTCCACCACCTATTCATGGAGAAATCCAAATGCTGCTGACTGAATAGACACGCATCGATCACTTAGCGGTGATGAAAGAAGCATAAAAGGTTACTTTCTCCCGTTTTCGTGTATGTAGTCTAATATAGCAGAAGCTGAGATGGCCTTGCCGTAAGACGGAAGTTTGGTCTCCAGGCTGCTTAGAAATTTAAGTATAAATATGTACATCACCCTCGTGCTTCGAGGGCTTTTACACTTGCTTGTATTGCTGTGCTATTAGTGTAGATTTCTTCTCTGATGAAACTATCAGAGAATATGTAGACCAGTAAAACCCGAGATTATGTGTGTAGAACAACTTATCCTGTGATGTATCTTTTTAGCATCCAGGAATCTATTACATTTCTGCTTAAGGTAATGAGTATGCTTTACTTTCAACTTGTCTGATCCTGTGGGCCTAAATGGGTCGGGCCCACACCAGACCCCACTCTGCATCTTGTCAGGCTGGGCTGAAAAGTTCAAAATAGGGCTCAGGGCCACGGGCTTGCCTAATTTTACTAAATTTAGTGTGCTTTGTCGTGTCGGGTCGAGTCGCG ATGGCGTCTGCAAAACCCTACCTCACCGTTTTCTCTCTCCTCTTCATCACCATCTTCTCCCTCTCAGAATCCTCAACTCCTCCTTCCGTCTTCGAAATTCTCCCCGAATTCGGCCTCCCAAGCGGTCTCTTGCCCAATTGCGTCCACAACTACACTCTCTCTCCTAAAGATGGTCGATTCACCGTTGACCTTGATACGAATTGCTATATTCAGTTCGATTACTTGGTTTACTACGAAAAACGCATCACCGGAACCCTAAAAATGGGGTCAATTACTGATTTGAAAGGGATTCAAGTCAAGCGACTCTTTCTGTGGTTTGATGTTGATGAAATTAAGGTGGATTTGCCTCCTTCTGATTCAATTTACTTTCATGTTGGTTTGATTAGCAAGAAGCTCAGTGTTCATCAGTTTGAAACTGTTCATTCTTGCCGTGCTTCCAATTCTCGTGGCCATCTTCGTTCTTGGAACCAAATGTTCGAGGATTGGCGTTCTGCTAATGTTCAATCAACCCAATGCTATACTATTCTTAGTGACAGAACTTCCACCACCTATTCATGGAGAAATCCAAATGCTGCTGACTGAATAGACACGCATCGATCACTTAGCGGTGATGAAAGAAGCATAAAAGGTTACTTTCTCCCGTTTTCGTGTATGTAGTCTAATATAGCAGAAGCTGAGATGGCCTTGCCGTAAGACGGAAGTTTGGTCTCCAGGCTGCTTAGAAATTTAAGTATAAATATGTACATCACCCTCGTGCTTCGAGGGCTTTTACACTTGCTTGTATTGCTGTGCTATTAGTGTAGATTTCTTCTCTGATGAAACTATCAGAGAATATGTAGACCAGTAAAACCCGAGATTATGTGTGTAGAACAACTTATCCTGTGATGTATCTTTTTAGCATCCAGGAATCTATTACATTTCTGCTTAAGGTAATGAGTATGCTTTACTTTCAACTTGTCTGATCCTGTGGGCCTAAATGGGTCGGGCCCACACCAGACCCCACTCTGCATCTTGTCAGGCTGGGCTGAAAAGTTCAAAATAGGGCTCAGGGCCACGGGCTTGCCTAATTTTACTAAATTTAGTGTGCTTTGTCGTGTCGGGTCGAGTCGCG ATGGCGTCTGCAAAACCCTACCTCACCGTTTTCTCTCTCCTCTTCATCACCATCTTCTCCCTCTCAGAATCCTCAACTCCTCCTTCCGTCTTCGAAATTCTCCCCGAATTCGGCCTCCCAAGCGGTCTCTTGCCCAATTGCGTCCACAACTACACTCTCTCTCCTAAAGATGGTCGATTCACCGTTGACCTTGATACGAATTGCTATATTCAGTTCGATTACTTGGTTTACTACGAAAAACGCATCACCGGAACCCTAAAAATGGGGTCAATTACTGATTTGAAAGGGATTCAAGTCAAGCGACTCTTTCTGTGGTTTGATGTTGATGAAATTAAGGTGGATTTGCCTCCTTCTGATTCAATTTACTTTCATGTTGGTTTGATTAGCAAGAAGCTCAGTGTTCATCAGTTTGAAACTGTTCATTCTTGCCGTGCTTCCAATTCTCGTGGCCATCTTCGTTCTTGGAACCAAATGTTCGAGGATTGGCGTTCTGCTAATGTTCAATCAACCCAATGCTATACTATTCTTAGTGACAGAACTTCCACCACCTATTCATGGAGAAATCCAAATGCTGCTGACTGA MASAKPYLTVFSLLFITIFSLSESSTPPSVFEILPEFGLPSGLLPNCVHNYTLSPKDGRFTVDLDTNCYIQFDYLVYYEKRITGTLKMGSITDLKGIQVKRLFLWFDVDEIKVDLPPSDSIYFHVGLISKKLSVHQFETVHSCRASNSRGHLRSWNQMFEDWRSANVQSTQCYTILSDRTSTTYSWRNPNAAD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00676.1 vs. NCBI nr
Match: gi|902236306|gb|KNA24322.1| (hypothetical protein SOVF_016780 [Spinacia oleracea]) HSP 1 Score: 329.7 bits (844), Expect = 3.400e-87 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Spo00676.1 vs. NCBI nr
Match: gi|731325430|ref|XP_010673512.1| (PREDICTED: uncharacterized protein LOC104889874 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 243.8 bits (621), Expect = 2.400e-61 Identity = 118/162 (72.84%), Postives = 136/162 (83.95%), Query Frame = 1
BLAST of Spo00676.1 vs. NCBI nr
Match: gi|224057098|ref|XP_002299126.1| (hypothetical protein POPTR_0001s04580g [Populus trichocarpa]) HSP 1 Score: 195.3 bits (495), Expect = 1.000e-46 Identity = 103/162 (63.58%), Postives = 119/162 (73.46%), Query Frame = 1
BLAST of Spo00676.1 vs. NCBI nr
Match: gi|743932790|ref|XP_011010691.1| (PREDICTED: uncharacterized protein LOC105115492 [Populus euphratica]) HSP 1 Score: 192.6 bits (488), Expect = 6.500e-46 Identity = 102/165 (61.82%), Postives = 123/165 (74.55%), Query Frame = 1
BLAST of Spo00676.1 vs. NCBI nr
Match: gi|330318680|gb|AEC11000.1| (hypothetical protein [Camellia sinensis]) HSP 1 Score: 191.0 bits (484), Expect = 1.900e-45 Identity = 97/138 (70.29%), Postives = 113/138 (81.88%), Query Frame = 1
BLAST of Spo00676.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZM7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016780 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.400e-87 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Spo00676.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CKS9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g071310 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 1.700e-61 Identity = 118/162 (72.84%), Postives = 136/162 (83.95%), Query Frame = 1
BLAST of Spo00676.1 vs. UniProtKB/TrEMBL
Match: B9GLI0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s04580g PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 6.900e-47 Identity = 103/162 (63.58%), Postives = 119/162 (73.46%), Query Frame = 1
BLAST of Spo00676.1 vs. UniProtKB/TrEMBL
Match: F4YFD9_CAMSI (Uncharacterized protein OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.300e-45 Identity = 97/138 (70.29%), Postives = 113/138 (81.88%), Query Frame = 1
BLAST of Spo00676.1 vs. UniProtKB/TrEMBL
Match: A0A067JTM4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22853 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.500e-45 Identity = 100/172 (58.14%), Postives = 122/172 (70.93%), Query Frame = 1
BLAST of Spo00676.1 vs. ExPASy Swiss-Prot
Match: Y5161_ARATH (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.700e-6 Identity = 28/98 (28.57%), Postives = 51/98 (52.04%), Query Frame = 1
BLAST of Spo00676.1 vs. TAIR (Arabidopsis)
Match: AT5G19860.1 (Protein of unknown function, DUF538) HSP 1 Score: 166.8 bits (421), Expect = 1.300e-41 Identity = 85/156 (54.49%), Postives = 110/156 (70.51%), Query Frame = 1
BLAST of Spo00676.1 vs. TAIR (Arabidopsis)
Match: AT1G55265.1 (Protein of unknown function, DUF538) HSP 1 Score: 112.5 bits (280), Expect = 3.000e-25 Identity = 67/167 (40.12%), Postives = 91/167 (54.49%), Query Frame = 1
BLAST of Spo00676.1 vs. TAIR (Arabidopsis)
Match: AT3G07470.1 (Protein of unknown function, DUF538) HSP 1 Score: 107.5 bits (267), Expect = 9.600e-24 Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 1
BLAST of Spo00676.1 vs. TAIR (Arabidopsis)
Match: AT5G16380.1 (Protein of unknown function, DUF538) HSP 1 Score: 100.1 bits (248), Expect = 1.500e-21 Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 1
BLAST of Spo00676.1 vs. TAIR (Arabidopsis)
Match: AT3G07460.2 (Protein of unknown function, DUF538) HSP 1 Score: 98.2 bits (243), Expect = 5.800e-21 Identity = 47/117 (40.17%), Postives = 73/117 (62.39%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00676.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00676.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00676.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo00676.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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