Spo00729 (gene) | SpinachBase

Overview


Name	Spo00729
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Stress responsive alpha-beta barrel domain protein
Location	chr6 : 38699044 .. 38705722 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTATAAAATCAGTAATAGGTAACTTTAATTAAAAAGAAAAATAGTCTATGAAAATCAATAAAACCTTGCAAATTAATTTTGTTGTTGTATAAAAGAAGGGGCTAAACAGAACAAAGAGGAGGATTAAGGCGCCAAAGCCATGGCAGTCTGCAGTCCACCCATTGCTCTTGCATTCCCATGTCTTTCTCCTGCAAAATTCTCCCTCAACTCTTGCAGTAAGCAACATTTCTTACTCCTTTTTGTATAATTTTCAACTTTTTCTTGCAATTTTCAGTTAATTGAAAAGATCAATAATTTTGACTCTGAAATTCCTCATATAATGCTTGGCCCAACATTTAATTTTGACATTGAAACTGTAAAGATTGAACCTTTTGGTACAAATTTGGGATTGATTTTAAAATTGATACCAATTTCAGCCCTAGAAATGAAGTTTTGGGGTAAAAGGAGAAATAGAGTTATAACTTTAGCGGCTTCATCACCGAATTCGAGTTACAATGTCGAACGAAAAAGGTTTGTTTTCTTCCCCAATTTGATTTAGGGATTACGTGGTGAATTAACTGATAATTCAATATACTTCGAGAAGACATTTGATTTGTTGGAATTAAATTTTATAACCAAAAAACAAAATTTTAGTTGGATATTTCCTTGTTTTGTTTGTGGCTAGGAATTCATTAATATATATGCTGTTCTGTATGAAAGGGAGAGCAAAGTAGCCATTGCTCGAATTTGTCAGTCCAGTACAATTCGATTATTGGATTAAATTAGACTATTGGAGACACTGGAATAGCTTCCTTTTCGTTGAAGCGGATAATGGGGTTGGTTTAAGTAGTTGAGAATCATGGACTATGTGATTTCTTTTGGGGAGGTCGGTCCTCGGATTGGTTGGTTTGTTAAAAGATATACTTCTTGAGGCATAAAGATCAACTAACAAGATATATAGAGAGTTGTAAATAATAGGTCATTTTATTTGTTAAATCAGAATAGTTAGATTGAGGGGCTAAAGAAAGATTGATAAATAAAACTTTTCTTCAATTGCATTGGTCATACCGTGTGAATTGTGGTCATACCGTGTGAATTGTGCGTCCTGTATCCTGTTGCTTATCTAAGTGATATTTAAACTATATATGTAATTGTGTCTCCTTTGTTGCATTGTAGGAAAGTTGTGGAACATTTATGTTTATTGAGAGCTAATGAAGATTTATCTGATGAACAAGAGAAGGATATGTTGGACAACCTTTATACATCTCAGTATCATATGGCTGGCATAGTTGCTATATCTTTAGGTGAATAAACATTTAAACATCATAAATGAAACTTATGCTTATATATGTGTGCTTTGTTTTCAGAATTAGTTATCCGTTAAGTTTTGATTATTGAAACCATGGAGAGAGCTTGTTTATTTATTTATTGGTCCGACTTAAGTGTACACTTACTTTGGCTTCGGATTTTTTTTAGTCTCAACTGTGGGAAATTGGCATTGTGATCAGTCACTTATTTTCCCTGTTAATGCTTCACCAAAGTACATAATGACATTTCTTATTAGAAAACTTCATTACTATAGAACAACTTACAGCAGATTTAGTTTTTTAGTAGCTGTTTTTTCTTTGTTTAAGCTTACCAATTGCTTGAATTTCCTCCGCAGTCCGCACTCTATCCCCTTCACTCCTGAGAAAAAAAACCTTCCTTTCCAAATCTATAGTTATTTTTTATGTGGTTTATTTATGGTAACAGTGTAAGTTTGAAAAATTACTTAATCGGTTTATATTAGTTGTATGACTTACTTGGAAGTTATACTATTTATTCCTGTAGGACGGACCTCAGATCAAAATCCTGAAAACTACACCCATGGCGTTTTCATGCGTTTCCACAAAAAGGAAGACCTTGCCAAATATTATCAGAATACTTCTTATTTGCGTGTTCTCAAGGAGTATGTTTCACCTTATTGTCATGTACGCACTGCAATGTAAATTTCAAAGCTTGTTTTTTTCCAACTTACTGTTTCCAGCTGTGTCTGTATATACTTTGTGGATTAACTCAACAGATATATTTACTTTAACTTAAGATCATTACAATTATACAGGACTTACTATATGTGGATTTCGAAGCTGAAGTAGAAGATGATATCCTTGCCATATTTCGGAAAGGAGAGGTTATAAATTTTCTTTTCCCTACAAGTAGTTATGCCCTGGTTTTAAAGTACTTGTCTCTGATGTTATTTTCCCTACTTAATATAATTGAACATCATTGGTTTGTGTGGCCAAGAGGGATGCTCAAAGCCAAATCTTATTTGCAAATCTTGTAGGTTAATCTAGGGGTGACTTTTTTTTTTTTTGCCAAATAAGAATTTTATTAAACCAAAGGGGAAAACAGGAAGAACAAAGCTACAATACCACAACAACCAAGCAGCCTATGTAATTTTGCAAAAATACATCAGAATGAATAAGCTCCTGCCTTCTTAGCAAGCCACTCATCATTTGCAGCAAAAAAAACTTACACAACTAAAAACAAAGGAAACCACCAGTCAAAAACAGAACAACAATAGCTTCTGATTCTCAGTAGCTTTATAAGCAGTGGTAAAAATAATTTCTTTGACTAAAGAAGCAGGATGCTTAGAAGAATTAGTGAAGGATTTCCCATTCCTCTGCAGCCGAACATGGTAGATGCATTCTGCAAAACATATGACATACAACTTATGCCTATCTCCAGATTCTTCCCCTCTTGACAGAAACTTGAAGCTCGGCAGTAAACTCTGTAACAGGCCTATGAAAATGTAGCAAGTGAAGAAGCTTACCCCATACTGCAGTAGAGTAGGCACACTTGAAAACCAGATGCTCAACACTCTCAGGTTCAAGCCCACACAGATAGAAAACATTGGAAGTTACTTCCTTCCAAACTAACAATCTATCCAAGGTAGCAAGCTTATTGTGAATAGCGAGCCAACTTATAAATAAGCTTTTGGAGTAGCTTTATTATTACACAAAACTTTGGACCAAGGAACTTTGCTGTGATTTCCAAGCAAATGCTGTTACATGCTTTTGATAGACAAACTTCCGTTCTTACAAACAACATCCCATCCTCCCATATCAATAATAAGCTCCATACAACTAAAAATCTTTTTAAGAGGCCAAGTGTTAGAATCCAACCTTCCTTTACTTGTATTTCTCCTTTCTATTGCTTTCTAGGATCTTTCTAATAGTTTTCTAGGCTTTAGGGAGAATTATTATGTTACTGTAATTCCAGTGTTCACTGGGAAGATTTAGCTAATTCAAAATAAACCTCTATGAGGGGTATGAACCAATACCTCTCATCAGAAGTTGCATTTGCTTAATTCATGTGTTGTTGCTAGCCTTTATAGATATTGTGCTGTCGCATGCTTTTAAGCTTTCCAAGACCCATCAAAGTCCCTTGCAAAACAGATACACTCTCGTCGTCGGTCCCGCTTGTGCCTGCTGTGCGCACACAAGCGCCCCGATCGACCCTCGACCCTCGCTCTTGTCGCCAATAGGCAAGAGTGCCCATTCTAAAGCAAACACCCGATCGTGCCCCGAGCCTTGAGATTCACTTTCCGCACAAAGCTTGCGCCCTTGCCGCCCCATAGGCAAGAGCGCGCCGCACGGATCCGGTGTCAAAACACTCGGACCGTGACACCAAGACATATTAGCAACTATCTACCCACCTGCACCAAAGTTTATCCTTTTTATAAGCAAGAGCCCACAAAAGCTTGGTGACAGCAGCCTTCCATAAACTCATCTCTTTGACGTTCCATCCTCCGGCTGTTCTAGGAAGACATAGAGTATGCCAAGCAACTAAGGTCTTCCTTGAAGGATTGGTATTTCCAGTCCAGAGATACACTCTGCAAATACTTTGTATTTCCTTAATAGCCTTCTTAGGTAATATGGAAATTTGACACCAGAAAGCATGCAGACTTAGCAGCACTGTCTTTATCAACTGAAGTCTACCTGCATAAGAAAGAGACCTCACAGTCCAACTCTTAGCCCCAGCAGTTACTCTTTCAATAATGGGTTTGCACTGAGTATACGAGAGTTTTTTGACAGAGAGGGGAACCCCCAAATAACGAAAGGGGAACTCACCTTTAGAGACTTTAAACCTGTCAACAATTTTGGCTTTATAGGCATCATCAACTCCACCCAAGTAGATGTTTGTTTTATCCATATTTGCTTCAAGGCCAGAGGCACGAGAAAAGCTATGGAAAGCATGCAAGAGAAGCGAAGTACAGACTTCATCCCCCCTAGAGAATAGCAACAAATCATCCGCATACATCAGATGCGTAATATTCAATCTTTCACATTTAGAATGGAAATTAAAATCAGGAATTTGCTTCAAAGAGCCCAATTGCCTTGACAAGTACATAGCAAAAAGGAACGGAGACATTGGGTCTCCTTGCCGTAGTCCTTTCTTTGCACAACAGGGAGGACTTGGCTTACCATTTATCAAACTACTATAAGAAACAGTTGTGATGCAGGAGAAAATCCATGTTACAAATGGCAGAGGAAATCCCAGCTCAAGCATAACCGTGTGAAGGTAGCTCCACTCAATTGAGTCATATGCTTTCTTCAAATCCACTTTAAGCATACATCTTGGAGATATATGAGCTCCATTGTAGCCTTTAATCAGTTCAGTAGCCAACAAGATATTATCAGATATAAGTCTATCAGGGATGAATCCCGATTGGTATTCACTAACCACATCACCAATAACTTGTTGCACCCTGGAGATCAAGATCTTTGCTATGATCTTATAGAAGACATTGCAACATGCAATGGGCCTAAAATCTTTAACCCCAGAAGGGGTTAGGAATTTAGGGAATCAAGGTCACTGCAGTGCAATTAAAATGATCAAACATAAAACCAGGGGAGAAAAACTCATGGACTGCAGCATAAATATCAGTTTTGATTTATGCCAAGTAACAAACTCATGGACCAGCTTTTTTTTATAAAAAATTGCATTTAAACCATCAAATGCTCTTAGCTTTTGTTACTTGTTACTTTTGTTGGTGACAACTTTTGAATAAAACCTGCTCTTAGATTTATGTTGGTTATTAAATTGACTGAAATTTACCTTGATAACAGGAGTTTAATTATGGAGTGGAGTTTGTGCTTCTGATTAAGTTTAATGAGGGCGCTTTAGATGGACCAGCAGAAGATGCATTGACTTCCCTTGCAAACTTGGCATTCGAGTTTCCATCCTTGATTGTGCAGTCTACTCAAGGTGTAGCTATATCCTAACGTGCATTCCCTTTAGAAAACATGGAAGCTTTCTGTGGAATGATTTAGAAAGCCATAAATTTTCAACAAGGAATGCTTTGAACATACAATGTATTTGCTTGCTTATCTTCCAACTTTCATGTCAGGTCGCAATTTTAATCTCGAGAGCAAGGAGTACACACACGCAATAGTGACTCGATTCCGATCTGGTGAGTTCGATCTCTGCATGTTTTATGAGGCTTCTGAAGTGCCAAACTTGGAGCTAACTATTGTTTTCTGTTAAATTGCAGTTGAAGCTCAGAAAATCTTCATGGATAGTTCAGAGTACAATCATGTAAGTCCATGTATAGGTTATCTACATACGTAGGTATTAGTGCCAAAATCATGCATATACCTGACATAATGACTGGTGGAGTTTGGTCTGTTGAAGTTGATCTTTGTGAAACGCTTAATATCGGACAATTTGTACATTTAGGAATTACTCCATTTCTAGCAAAGTAAATGGCAGACACCTTCAACAGATCAAATTCCGTGAAATTTTCTACTTTCTTTCTTGCAAACCTTGAGGTTCCCTTATTCATGGATAAATTCACCTTCCTTGTGAAAATCTAGGAGAAGCTAATATTTTCTAAACATCAAAATGAAAATTAGTGGGGGATGATGCTAAAATAAAAGCAGATATTAGTACTATCAATGTACTTTTTAACTAGGCCTAATACCTTACAGTAAGTACTATAGTTTGCATTTAACAATGGCTTAGCTTGCTTTATCCTAGTAACATGTCATATTCTTTTGCAAACTTTGAAATAACAGATATGGGAATCGAAATTACTGCCAATTATCCTTCAAACTCTTTCGTTCCATTTCCTCGTGGCTCCAGTAGGCACTGAACTCATGTAAAGGCAAGCGGCAACTGTATCTGCAGTTCGGTTAAACTTGATGCATACTAGTCCTGGTAAAGGCAATTTCATTTACCTGACTGTTATCATTAATTCTTTCTTTAAACTGGTTTTATTTAAACTTGACACTTTTACTCGTGTTGTAACAGTATAATCCGAAGATACTCCATATGCAACAATATTTTCTTCACTCAGATATCTATCTAGAGCTTCAAATTTGTGATTGATTGGCTCTGAATAGTTACGTGCGTGTTGAATTTTTGCAGGGGTTAATGATGTTTACCTACATAATTGCCGAATTAGGAAAGGTACCTGGTTAATAAGAGTATGTACATTCAAATCAGTCACATTTTGAAATATAGTAATTGGAAAAGGGGTATATATATAATGTATAAATTGCTGTCTTTGGTGGGTCTTTTCCACAGGAATTGAGCCTCTTGAACTGGAGTCTTAATCCTATCATACTATTCACGTTTGTTTATATGGATATCTTGTCAATCATAATCTGATTAACTGTATTGTTTGAAACTAACATAAGAAATTAATGGCAAG

mRNA sequence

GTTTTATAAAATCAGTAATAGGTAACTTTAATTAAAAAGAAAAATAGTCTATGAAAATCAATAAAACCTTGCAAATTAATTTTGTTGTTGTATAAAAGAAGGGGCTAAACAGAACAAAGAGGAGGATTAAGGCGCCAAAGCCATGGCAGTCTGCAGTCCACCCATTGCTCTTGCATTCCCATGTCTTTCTCCTGCAAAATTCTCCCTCAACTCTTGCACCCTAGAAATGAAGTTTTGGGGTAAAAGGAGAAATAGAGTTATAACTTTAGCGGCTTCATCACCGAATTCGAGTTACAATGTCGAACGAAAAAGGAAAGTTGTGGAACATTTATGTTTATTGAGAGCTAATGAAGATTTATCTGATGAACAAGAGAAGGATATGTTGGACAACCTTTATACATCTCAGTATCATATGGCTGGCATAGTTGCTATATCTTTAGGACGGACCTCAGATCAAAATCCTGAAAACTACACCCATGGCGTTTTCATGCGTTTCCACAAAAAGGAAGACCTTGCCAAATATTATCAGAATACTTCTTATTTGCGTGTTCTCAAGGAGTATGTTTCACCTTATTGTCATGACTTACTATATGTGGATTTCGAAGCTGAAGTAGAAGATGATATCCTTGCCATATTTCGGAAAGGAGAGGAGTTTAATTATGGAGTGGAGTTTGTGCTTCTGATTAAGTTTAATGAGGGCGCTTTAGATGGACCAGCAGAAGATGCATTGACTTCCCTTGCAAACTTGGCATTCGAGTTTCCATCCTTGATTGTGCAGTCTACTCAAGGTCGCAATTTTAATCTCGAGAGCAAGGAGTACACACACGCAATAGTGACTCGATTCCGATCTGTTGAAGCTCAGAAAATCTTCATGGATAGTTCAGAGTACAATCATATATGGGAATCGAAATTACTGCCAATTATCCTTCAAACTCTTTCGTTCCATTTCCTCGTGGCTCCAGTAGGCACTGAACTCATGTAAAGGCAAGCGGCAACTGTATCTGCAGTTCGGTTAAACTTGATGCATACTAGTCCTGTATAATCCGAAGATACTCCATATGCAACAATATTTTCTTCACTCAGATATCTATCTAGAGCTTCAAATTTGTGATTGATTGGCTCTGAATAGTTACGTGCGTGTTGAATTTTTGCAGGGGTTAATGATGTTTACCTACATAATTGCCGAATTAGGAAAGGTACCTGGTTAATAAGAGTATGTACATTCAAATCAGTCACATTTTGAAATATAGTAATTGGAAAAGGGGTATATATATAATGTATAAATTGCTGTCTTTGGTGGGTCTTTTCCACAGGAATTGAGCCTCTTGAACTGGAGTCTTAATCCTATCATACTATTCACGTTTGTTTATATGGATATCTTGTCAATCATAATCTGATTAACTGTATTGTTTGAAACTAACATAAGAAATTAATGGCAAG

Coding sequence (CDS)

ATGGCAGTCTGCAGTCCACCCATTGCTCTTGCATTCCCATGTCTTTCTCCTGCAAAATTCTCCCTCAACTCTTGCACCCTAGAAATGAAGTTTTGGGGTAAAAGGAGAAATAGAGTTATAACTTTAGCGGCTTCATCACCGAATTCGAGTTACAATGTCGAACGAAAAAGGAAAGTTGTGGAACATTTATGTTTATTGAGAGCTAATGAAGATTTATCTGATGAACAAGAGAAGGATATGTTGGACAACCTTTATACATCTCAGTATCATATGGCTGGCATAGTTGCTATATCTTTAGGACGGACCTCAGATCAAAATCCTGAAAACTACACCCATGGCGTTTTCATGCGTTTCCACAAAAAGGAAGACCTTGCCAAATATTATCAGAATACTTCTTATTTGCGTGTTCTCAAGGAGTATGTTTCACCTTATTGTCATGACTTACTATATGTGGATTTCGAAGCTGAAGTAGAAGATGATATCCTTGCCATATTTCGGAAAGGAGAGGAGTTTAATTATGGAGTGGAGTTTGTGCTTCTGATTAAGTTTAATGAGGGCGCTTTAGATGGACCAGCAGAAGATGCATTGACTTCCCTTGCAAACTTGGCATTCGAGTTTCCATCCTTGATTGTGCAGTCTACTCAAGGTCGCAATTTTAATCTCGAGAGCAAGGAGTACACACACGCAATAGTGACTCGATTCCGATCTGTTGAAGCTCAGAAAATCTTCATGGATAGTTCAGAGTACAATCATATATGGGAATCGAAATTACTGCCAATTATCCTTCAAACTCTTTCGTTCCATTTCCTCGTGGCTCCAGTAGGCACTGAACTCATGTAA

Protein sequence

MAVCSPPIALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERKRKVVEHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFMRFHKKEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVEFVLLIKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRSVEAQKIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00729.1	Spo00729.1	mRNA

Homology

[Close]

BLAST of Spo00729.1 vs. NCBI nr
Match: gi|902197525|gb|KNA13452.1| (hypothetical protein SOVF_116730 [Spinacia oleracea])

HSP 1 Score: 559.7 bits (1441), Expect = 2.900e-156
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1


		  
Query: 1   MAVCSPPIALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERKRKVV 60
           MAVCSPPIALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERKRKVV
Sbjct: 1   MAVCSPPIALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERKRKVV 60

Query: 61  EHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFMRFHK 120
           EHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFMRFHK
Sbjct: 61  EHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFMRFHK 120

Query: 121 KEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVEFVLL 180
           KEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVEFVLL
Sbjct: 121 KEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVEFVLL 180

Query: 181 IKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRSVEAQ 240
           IKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRSVEAQ
Sbjct: 181 IKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRSVEAQ 240

Query: 241 KIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM 280
           KIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM
Sbjct: 241 KIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM 279

[Close]

BLAST of Spo00729.1 vs. NCBI nr
Match: gi|731331139|ref|XP_010676505.1| (PREDICTED: uncharacterized protein LOC104892308 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 433.3 bits (1113), Expect = 3.100e-118
Identity = 225/283 (79.51%), Postives = 246/283 (86.93%), Query Frame = 1


		  
Query: 1   MAVCSPPI----ALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERK 60
           MAVCSP I    ALA P LS  K SLNS +LE+KFWG+RR   + LA+SS NS+YNVERK
Sbjct: 1   MAVCSPLICFSNALAIPHLSLGKHSLNSYSLEIKFWGERRKSALCLASSSQNSNYNVERK 60

Query: 61  RKVVEHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFM 120
           RKVVEH+CLLRA EDLS+EQEKDMLD LYTSQYHMAGIVAISLGRTSD NPENY+HGVFM
Sbjct: 61  RKVVEHICLLRAKEDLSEEQEKDMLDYLYTSQYHMAGIVAISLGRTSDPNPENYSHGVFM 120

Query: 121 RFHKKEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVE 180
           RF +KEDLAK+Y+N  Y+RVLKE+V+PYCHDLL VDFE EVEDDILAIFRKGEEFNYGVE
Sbjct: 121 RFQRKEDLAKFYENALYMRVLKEHVAPYCHDLLNVDFEVEVEDDILAIFRKGEEFNYGVE 180

Query: 181 FVLLIKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRS 240
           FVLLIKF E AL+GP  DALTSLANLAFEFPSLIVQSTQG NFN ESKEYTHAIV RFRS
Sbjct: 181 FVLLIKFYESALNGP--DALTSLANLAFEFPSLIVQSTQGSNFNPESKEYTHAIVIRFRS 240

Query: 241 VEAQKIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM 280
           VEAQKIF++SSEY HI ESKLLP+  + LSFHFLV PVGT+LM
Sbjct: 241 VEAQKIFLESSEYKHILESKLLPMSQKILSFHFLVDPVGTDLM 281

[Close]

BLAST of Spo00729.1 vs. NCBI nr
Match: gi|731331137|ref|XP_010676504.1| (PREDICTED: uncharacterized protein LOC104892308 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 431.8 bits (1109), Expect = 9.100e-118
Identity = 224/283 (79.15%), Postives = 246/283 (86.93%), Query Frame = 1


		  
Query: 1   MAVCSPPI----ALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERK 60
           MAVCSP I    ALA P LS  K SLNS +LE+KFWG+RR   + LA+SS NS+YNVERK
Sbjct: 1   MAVCSPLICFSNALAIPHLSLGKHSLNSYSLEIKFWGERRKSALCLASSSQNSNYNVERK 60

Query: 61  RKVVEHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFM 120
           RKVVEH+CLLRA EDLS+EQEKDMLD LYTSQYHMAGIVAISLGRTSD NPENY+HGVFM
Sbjct: 61  RKVVEHICLLRAKEDLSEEQEKDMLDYLYTSQYHMAGIVAISLGRTSDPNPENYSHGVFM 120

Query: 121 RFHKKEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVE 180
           RF +KEDLAK+Y+N  Y+RVLKE+V+PYCHDLL VDFE EVEDDILAIFRKGEEFNYGVE
Sbjct: 121 RFQRKEDLAKFYENALYMRVLKEHVAPYCHDLLNVDFEVEVEDDILAIFRKGEEFNYGVE 180

Query: 181 FVLLIKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRS 240
           FVLLIKF E AL+GP  DALTSLANLAFEFPSLIVQSTQG NFN ESKEYTHAIV RFRS
Sbjct: 181 FVLLIKFYESALNGP--DALTSLANLAFEFPSLIVQSTQGSNFNPESKEYTHAIVIRFRS 240

Query: 241 VEAQKIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM 280
           VEAQKIF++SSEY HI ESKLLP+  + LSFHFLV PVGT+L+
Sbjct: 241 VEAQKIFLESSEYKHILESKLLPMSQKILSFHFLVDPVGTDLI 281

[Close]

BLAST of Spo00729.1 vs. NCBI nr
Match: gi|747068477|ref|XP_011080997.1| (PREDICTED: uncharacterized protein LOC105164121 [Sesamum indicum])

HSP 1 Score: 332.4 bits (851), Expect = 7.500e-88
Identity = 158/248 (63.71%), Postives = 195/248 (78.63%), Query Frame = 1


		  
Query: 32  WGKRRNRVITLAASSPNSSYNVERKRKVVEHLCLLRANEDLSDEQEKDMLDNLYTSQYHM 91
           W K+  RV+  A    + ++ V+RKRKVVEH+CL +A +DLS++QEKDMLD LYT+QYHM
Sbjct: 57  WAKKDKRVVFSAVEEGSLAHGVQRKRKVVEHICLFKAKKDLSEDQEKDMLDYLYTTQYHM 116

Query: 92  AGIVAISLGRTSDQNPENYTHGVFMRFHKKEDLAKYYQNTSYLRVLKEYVSPYCHDLLYV 151
            GIVA+SLGR S+ NPE YTH +FMRF  KEDLAK+Y+N  YL VLKE+V PYCH   Y+
Sbjct: 117 RGIVALSLGRISEPNPEQYTHAIFMRFQTKEDLAKFYENPFYLGVLKEHVMPYCHGFFYL 176

Query: 152 DFEAEVEDDILAIFRKGEEFNYGVEFVLLIKFNEGALDGPAEDALTSLANLAFEFPSLIV 211
           D+E+EVEDDIL IFRKGEEFN+GVE VLL+ F+  +L GPAEDA+TSL NL  EFPSLIV
Sbjct: 177 DYESEVEDDILPIFRKGEEFNHGVELVLLVAFSRSSLGGPAEDAMTSLENLTMEFPSLIV 236

Query: 212 QSTQGRNFNLESKEYTHAIVTRFRSVEAQKIFMDSSEYNHIWESKLLPIILQTLSFHFLV 271
           Q+T+G N N+ + EYTH +V RFRS EA KIFM+SSEY+ +W+SK  P I + LS HFLV
Sbjct: 237 QATKGPNLNMTNMEYTHGVVIRFRSSEAFKIFMNSSEYSTMWKSKFQPFIQKVLSLHFLV 296

Query: 272 APVGTELM 280
            P+GTELM
Sbjct: 297 DPIGTELM 304

[Close]

BLAST of Spo00729.1 vs. NCBI nr
Match: gi|731379387|ref|XP_010660971.1| (PREDICTED: uncharacterized protein LOC100244522 isoform X1 [Vitis vinifera])

HSP 1 Score: 322.8 bits (826), Expect = 6.000e-85
Identity = 161/247 (65.18%), Postives = 191/247 (77.33%), Query Frame = 1


		  
Query: 33  GKRRNRVITLAASSPNSSYNVERKRKVVEHLCLLRANEDLSDEQEKDMLDNLYTSQYHMA 92
           GK+R  + + A+   NSS + E KRKVVEH+CLL+A E+LS+E+EKDMLD LYT+QY M 
Sbjct: 53  GKKRGAIFS-ASVGQNSSNDTEGKRKVVEHICLLKAKENLSEEEEKDMLDYLYTTQYQMR 112

Query: 93  GIVAISLGRTSDQNPENYTHGVFMRFHKKEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVD 152
           GI+AI+LGR SDQN ENYTH V+MRF +KEDL K+Y+N  YL VL+E V PYCH L+YVD
Sbjct: 113 GIIAITLGRISDQNIENYTHAVYMRFQRKEDLGKFYENPFYLGVLRERVMPYCHGLIYVD 172

Query: 153 FEAEVEDDILAIFRKGEEFNYGVEFVLLIKFNEGALDGPAEDALTSLANLAFEFPSLIVQ 212
           FE+EVEDDIL IFRKGEEFNYGVEF+LLI F +    GPAEDAL SLA L  EFPSLIVQ
Sbjct: 173 FESEVEDDILPIFRKGEEFNYGVEFILLISFAKSKFGGPAEDALASLAELILEFPSLIVQ 232

Query: 213 STQGRNFNLESKEYTHAIVTRFRSVEAQKIFMDSSEYNHIWESKLLPIILQTLSFHFLVA 272
           STQG NF   SKEYTH +V RFRS+EA ++F  S+EY  IW SK   I+ +TL  HF V 
Sbjct: 233 STQGLNFCPSSKEYTHGVVIRFRSIEALELFTGSTEYKDIWRSKFQMIVQKTLPIHFSVD 292

Query: 273 PVGTELM 280
           PVGTE+M
Sbjct: 293 PVGTEIM 298

[Close]

BLAST of Spo00729.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3Q1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_116730 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 2.000e-156
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1


		  
Query: 1   MAVCSPPIALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERKRKVV 60
           MAVCSPPIALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERKRKVV
Sbjct: 1   MAVCSPPIALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERKRKVV 60

Query: 61  EHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFMRFHK 120
           EHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFMRFHK
Sbjct: 61  EHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFMRFHK 120

Query: 121 KEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVEFVLL 180
           KEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVEFVLL
Sbjct: 121 KEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVEFVLL 180

Query: 181 IKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRSVEAQ 240
           IKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRSVEAQ
Sbjct: 181 IKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRSVEAQ 240

Query: 241 KIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM 280
           KIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM
Sbjct: 241 KIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM 279

[Close]

BLAST of Spo00729.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CJ70_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g100700 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.200e-118
Identity = 225/283 (79.51%), Postives = 246/283 (86.93%), Query Frame = 1


		  
Query: 1   MAVCSPPI----ALAFPCLSPAKFSLNSCTLEMKFWGKRRNRVITLAASSPNSSYNVERK 60
           MAVCSP I    ALA P LS  K SLNS +LE+KFWG+RR   + LA+SS NS+YNVERK
Sbjct: 1   MAVCSPLICFSNALAIPHLSLGKHSLNSYSLEIKFWGERRKSALCLASSSQNSNYNVERK 60

Query: 61  RKVVEHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAISLGRTSDQNPENYTHGVFM 120
           RKVVEH+CLLRA EDLS+EQEKDMLD LYTSQYHMAGIVAISLGRTSD NPENY+HGVFM
Sbjct: 61  RKVVEHICLLRAKEDLSEEQEKDMLDYLYTSQYHMAGIVAISLGRTSDPNPENYSHGVFM 120

Query: 121 RFHKKEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEVEDDILAIFRKGEEFNYGVE 180
           RF +KEDLAK+Y+N  Y+RVLKE+V+PYCHDLL VDFE EVEDDILAIFRKGEEFNYGVE
Sbjct: 121 RFQRKEDLAKFYENALYMRVLKEHVAPYCHDLLNVDFEVEVEDDILAIFRKGEEFNYGVE 180

Query: 181 FVLLIKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGRNFNLESKEYTHAIVTRFRS 240
           FVLLIKF E AL+GP  DALTSLANLAFEFPSLIVQSTQG NFN ESKEYTHAIV RFRS
Sbjct: 181 FVLLIKFYESALNGP--DALTSLANLAFEFPSLIVQSTQGSNFNPESKEYTHAIVIRFRS 240

Query: 241 VEAQKIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTELM 280
           VEAQKIF++SSEY HI ESKLLP+  + LSFHFLV PVGT+LM
Sbjct: 241 VEAQKIFLESSEYKHILESKLLPMSQKILSFHFLVDPVGTDLM 281

[Close]

BLAST of Spo00729.1 vs. UniProtKB/TrEMBL
Match: D7TW31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03940 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.200e-85
Identity = 161/247 (65.18%), Postives = 191/247 (77.33%), Query Frame = 1


		  
Query: 33  GKRRNRVITLAASSPNSSYNVERKRKVVEHLCLLRANEDLSDEQEKDMLDNLYTSQYHMA 92
           GK+R  + + A+   NSS + E KRKVVEH+CLL+A E+LS+E+EKDMLD LYT+QY M 
Sbjct: 53  GKKRGAIFS-ASVGQNSSNDTEGKRKVVEHICLLKAKENLSEEEEKDMLDYLYTTQYQMR 112

Query: 93  GIVAISLGRTSDQNPENYTHGVFMRFHKKEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVD 152
           GI+AI+LGR SDQN ENYTH V+MRF +KEDL K+Y+N  YL VL+E V PYCH L+YVD
Sbjct: 113 GIIAITLGRISDQNIENYTHAVYMRFQRKEDLGKFYENPFYLGVLRERVMPYCHGLIYVD 172

Query: 153 FEAEVEDDILAIFRKGEEFNYGVEFVLLIKFNEGALDGPAEDALTSLANLAFEFPSLIVQ 212
           FE+EVEDDIL IFRKGEEFNYGVEF+LLI F +    GPAEDAL SLA L  EFPSLIVQ
Sbjct: 173 FESEVEDDILPIFRKGEEFNYGVEFILLISFAKSKFGGPAEDALASLAELILEFPSLIVQ 232

Query: 213 STQGRNFNLESKEYTHAIVTRFRSVEAQKIFMDSSEYNHIWESKLLPIILQTLSFHFLVA 272
           STQG NF   SKEYTH +V RFRS+EA ++F  S+EY  IW SK   I+ +TL  HF V 
Sbjct: 233 STQGLNFCPSSKEYTHGVVIRFRSIEALELFTGSTEYKDIWRSKFQMIVQKTLPIHFSVD 292

Query: 273 PVGTELM 280
           PVGTE+M
Sbjct: 293 PVGTEIM 298

[Close]

BLAST of Spo00729.1 vs. UniProtKB/TrEMBL
Match: A0A067EI34_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022676mg PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 5.400e-85
Identity = 161/253 (63.64%), Postives = 193/253 (76.28%), Query Frame = 1


		  
Query: 27  LEMKFWGKRRNRVITLAASSPNSSYNVERKRKVVEHLCLLRANEDLSDEQEKDMLDNLYT 86
           + M+   +R      LA+   +SSYN E+KRKVVEH+CLL+A +DLS+E+EKDMLD LYT
Sbjct: 41  MSMRLSRERTVGTTVLASKEQSSSYNSEKKRKVVEHICLLKAKKDLSEEEEKDMLDYLYT 100

Query: 87  SQYHMAGIVAISLGRTSDQNPENYTHGVFMRFHKKEDLAKYYQNTSYLRVLKEYVSPYCH 146
           SQY M GIVAISLGR S++N ENYTHGVFMRF +KE L K+Y+N  Y +VLKE+V PYCH
Sbjct: 101 SQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLKEHVMPYCH 160

Query: 147 DLLYVDFEAEVEDDILAIFRKGEEFNYGVEFVLLIKFNEGALDGPAEDALTSLANLAFEF 206
            L+ VD+E EVEDDIL IFRKGE+FN+GVEFVLLI F + A  GPAEDAL SL  L  EF
Sbjct: 161 GLMNVDYETEVEDDILPIFRKGEDFNFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEF 220

Query: 207 PSLIVQSTQGRNFNLESKEYTHAIVTRFRSVEAQKIFMDSSEYNHIWESKLLPIILQTLS 266
           PSLIVQSTQG NFNL S+ YTHA+V R RSVEA ++F+ SS+Y  +W +K  PII   L 
Sbjct: 221 PSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLP 280

Query: 267 FHFLVAPVGTELM 280
            HF V PVGTE+M
Sbjct: 281 VHFSVDPVGTEIM 293

[Close]

BLAST of Spo00729.1 vs. UniProtKB/TrEMBL
Match: V4UEW7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016122mg PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.600e-84
Identity = 160/253 (63.24%), Postives = 192/253 (75.89%), Query Frame = 1


		  
Query: 27  LEMKFWGKRRNRVITLAASSPNSSYNVERKRKVVEHLCLLRANEDLSDEQEKDMLDNLYT 86
           + M+   +R      LA+   +SSYN E+KRKVVEH+CLL+A +DLS+E+E DMLD LYT
Sbjct: 41  MSMRLSRERTVGTTVLASKEQSSSYNSEKKRKVVEHICLLKAKKDLSEEEENDMLDYLYT 100

Query: 87  SQYHMAGIVAISLGRTSDQNPENYTHGVFMRFHKKEDLAKYYQNTSYLRVLKEYVSPYCH 146
           SQY M GIVAISLGR S++N ENYTHGVFMRF +KE L K+Y+N  Y +VLKE+V PYCH
Sbjct: 101 SQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEQLVKFYENPFYSKVLKEHVMPYCH 160

Query: 147 DLLYVDFEAEVEDDILAIFRKGEEFNYGVEFVLLIKFNEGALDGPAEDALTSLANLAFEF 206
            L+ VD+E EVEDDIL IFRKGE+FN+GVEFVLLI F + A  GPAEDAL SL  L  EF
Sbjct: 161 GLMNVDYETEVEDDILPIFRKGEDFNFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEF 220

Query: 207 PSLIVQSTQGRNFNLESKEYTHAIVTRFRSVEAQKIFMDSSEYNHIWESKLLPIILQTLS 266
           PSLIVQSTQG NFNL S+ YTHA+V R RSVEA ++F+ SS+Y  +W +K  PII   L 
Sbjct: 221 PSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLP 280

Query: 267 FHFLVAPVGTELM 280
            HF V PVGTE+M
Sbjct: 281 VHFSVDPVGTEIM 293

[Close]

BLAST of Spo00729.1 vs. TAIR (Arabidopsis)
Match: AT2G32500.1 (Stress responsive alpha-beta barrel domain protein)

HSP 1 Score: 275.8 bits (704), Expect = 3.000e-74
Identity = 139/242 (57.44%), Postives = 174/242 (71.90%), Query Frame = 1


		  
Query: 38  RVITLAASSPNSSYNVERKRKVVEHLCLLRANEDLSDEQEKDMLDNLYTSQYHMAGIVAI 97
           RV   AA    +S    + RKVVEH+CLL+A E LS+E EKDMLD LYT+QY M GIVAI
Sbjct: 35  RVTFCAADDQIASSKSNKTRKVVEHVCLLKAKEGLSEEVEKDMLDYLYTTQYQMRGIVAI 94

Query: 98  SLGRTSDQNPENYTHGVFMRFHKKEDLAKYYQNTSYLRVLKEYVSPYCHDLLYVDFEAEV 157
           S+G   D+N E +TH ++MRF KKEDL K+Y+N  +L+VL EYV+P+CH L  VD+E+EV
Sbjct: 95  SVGCIGDRNNEYFTHALYMRFQKKEDLDKFYENPFFLKVLNEYVTPFCHGLTNVDYESEV 154

Query: 158 EDDILAIFRKGEEFNYGVEFVLLIKFNEGALDGPAEDALTSLANLAFEFPSLIVQSTQGR 217
           EDDILAIFRKGEE+NYG EFVLLI F + A +   +DA+ S A L    PSLIVQSTQG 
Sbjct: 155 EDDILAIFRKGEEYNYGEEFVLLITFAKSASEKNTKDAMDSFAQLTSSLPSLIVQSTQGS 214

Query: 218 NFNLESKEYTHAIVTRFRSVEAQKIFMDSSEYNHIWESKLLPIILQTLSFHFLVAPVGTE 277
           NFN  SKE+THA V RFRS +A +IF +  EY  +W S+  P I ++ + HF V PVGT+
Sbjct: 215 NFNGSSKEFTHAAVVRFRSFDAMEIFFEGREYKDMWRSQFEPFIEKSEALHFSVDPVGTD 274

Query: 278 LM 280
           +M
Sbjct: 275 VM 276

The following BLAST results are available for this feature:

BLAST of Spo00729.1 vs. NCBI nr
BLAST of Spo00729.1 vs. UniProtKB/TrEMBL
BLAST of Spo00729.1 vs. ExPASy Swiss-Prot
BLAST of Spo00729.1 vs. TAIR (Arabidopsis)

BLAST of Spo00729.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902197525\|gb\|KNA13452.1\|	2.9e-156	100.	hypothetical protein SOVF_1167...	[more]
gi\|731331139\|ref\|XP_010676505.1\|	3.1e-118	79.5	PREDICTED: uncharacterized pro...	[more]
gi\|731331137\|ref\|XP_010676504.1\|	9.1e-118	79.1	PREDICTED: uncharacterized pro...	[more]
gi\|747068477\|ref\|XP_011080997.1\|	7.5e-88	63.7	PREDICTED: uncharacterized pro...	[more]
gi\|731379387\|ref\|XP_010660971.1\|	6.0e-85	65.1	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo00729.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R3Q1_SPIOL	2.0e-156	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CJ70_BETVU	2.2e-118	79.5	Uncharacterized protein OS=Bet...	[more]
D7TW31_VITVI	4.2e-85	65.1	Putative uncharacterized prote...	[more]
A0A067EI34_CITSI	5.4e-85	63.6	Uncharacterized protein OS=Cit...	[more]
V4UEW7_9ROSI	1.6e-84	63.2	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo00729.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo00729.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G32500.1	3.0e-74	57.4	Stress responsive alpha-beta b...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011008	Dimeric alpha-beta barrel	unknown	SSF54909	Dimeric alpha+beta barrel	coord: 58..163 score: 4.65E-15coord: 175..274 score: 4.0
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 178..267 score: 5.6E-5coord: 60..154 score: 3.3
IPR013097	Stress responsive alpha-beta barrel	SMART	SM00886	Dabb_2	coord: 175..271 score: 3.6E-4coord: 60..155 score: 3.7
IPR013097	Stress responsive alpha-beta barrel	PROFILE	PS51502	S_R_A_B_BARREL	coord: 60..153 score: 20.111coord: 175..269 score: 15
None	No IPR available	GENE3D	3.30.70.900		coord: 55..154 score: 2.8E-18coord: 175..271 score: 5.
None	No IPR available	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 18..279 score: 1.9E
None	No IPR available	PANTHER	PTHR33178:SF1	SUBFAMILY NOT NAMED	coord: 18..279 score: 1.9E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0006449	regulation of translational termination
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
cellular_component	GO:0018444	translation release factor complex
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0009534	chloroplast thylakoid
molecular_function	GO:0003747	translation release factor activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0003735	structural constituent of ribosome

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo02935	0.78	Barchart \| Table
Spo21152	0.77	Barchart \| Table
Spo15482	0.76	Barchart \| Table
Spo04490	0.75	Barchart \| Table
Spo09426	0.75	Barchart \| Table
Spo09601	0.74	Barchart \| Table
Spo03835	0.73	Barchart \| Table
Spo03884	0.73	Barchart \| Table
Spo07313	0.73	Barchart \| Table
Spo14848	0.72	Barchart \| Table
Spo01831	0.72	Barchart \| Table
Spo16904	0.72	Barchart \| Table
Spo14310	0.71	Barchart \| Table
Spo15422	0.71	Barchart \| Table
Spo09493	0.70	Barchart \| Table
Spo00129	0.70	Barchart \| Table
Spo26978	0.70	Barchart \| Table
Spo23911	0.70	Barchart \| Table
Spo18860	0.70	Barchart \| Table
Spo17682	0.70	Barchart \| Table
Spo05638	0.70	Barchart \| Table
Spo09020	0.70	Barchart \| Table
Spo15946	0.69	Barchart \| Table
Spo00155	0.69	Barchart \| Table
Spo11683	0.69	Barchart \| Table
Spo11887	0.69	Barchart \| Table
Spo15501	0.69	Barchart \| Table
Spo18480	0.69	Barchart \| Table
Spo20243	0.69	Barchart \| Table
Spo26074	0.69	Barchart \| Table
Spo15135	0.68	Barchart \| Table
Spo08998	0.68	Barchart \| Table
Spo21910	0.68	Barchart \| Table
Spo14086	0.68	Barchart \| Table
Spo16558	0.68	Barchart \| Table
Spo12874	0.68	Barchart \| Table
Spo17319	0.68	Barchart \| Table
Spo08533	0.68	Barchart \| Table
Spo03135	0.68	Barchart \| Table
Spo10619	0.67	Barchart \| Table
Spo00081	0.67	Barchart \| Table
Spo07071	0.67	Barchart \| Table
Spo01615	0.67	Barchart \| Table
Spo20889	0.67	Barchart \| Table
Spo06455	0.67	Barchart \| Table
Spo21387	0.67	Barchart \| Table
Spo17125	0.67	Barchart \| Table
Spo14013	0.67	Barchart \| Table
Spo04066	0.67	Barchart \| Table
Spo24415	0.66	Barchart \| Table
Spo05674	0.66	Barchart \| Table
Spo25344	0.66	Barchart \| Table
Spo16108	0.66	Barchart \| Table
Spo17081	0.66	Barchart \| Table
Spo26068	0.66	Barchart \| Table
Spo01642	0.66	Barchart \| Table
Spo23165	0.66	Barchart \| Table
Spo23465	0.66	Barchart \| Table
Spo01639	0.66	Barchart \| Table
Spo10090	0.66	Barchart \| Table
Spo23931	0.66	Barchart \| Table
Spo06468	0.65	Barchart \| Table
Spo15552	0.65	Barchart \| Table
Spo02001	0.65	Barchart \| Table
Spo17641	0.65	Barchart \| Table