Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAGGTACTAGTTCACAAAGTGAGGTAAAAAGAAGGTACTTTTTGACAATTTTGCCTTTTAGATATTTACAAAAGTCCAACCTCCGTATAAATTATAAACCCTAGCCTCGCTCTGCCGAAAACCAACCGAAAACCCTCGGATTATCGTAAGAAAACTCACAGAAAAATGGCGAAATCACTGAGGTCGAAGAGAGAGAAAAGGCTGAGAGCAATCCGAAGAGAGATTGTTGAACCCTTTTACGAGAACAAAGATGCAGCCAAGCTTGCCGCACAACAAGCCGCCCTCTCCGCCCCTAAACTCGCCGTCCGCAACACAAATAACACCTCCATGGATGTCACCTCGTCCCTCCCACCATCTACCTCCAATCTTACGTCCAATCTTAGCATGGGTATGTTTTTCTTTGTAATCTCGTTCTCTTGTGAAATAATGTTTGTGTATTAGTTTTGGGTAATTGGGGTTTTTGTGGATTTTGTTTTGATTTCATTGATTTGATGTGATATAGAAGTATAAGTGTAGGAATGCAATTGACTTATTGTATTGATTTGGTGTATTGGAGTGCAAATTAAATTGATAGAATACAAAGTTTGTGTATTAGTTTTAGCTACAAAAGGTTTTTTGTATTTTTGTTTTGATGTGAAAAAACATGTGTAGGAGTGCAATTGATTGGTTACTGTTTATATTTGATTGCTTTTGTTTAGCTACATTTTATCAAGTAGTTGTGGAAATCCATAGAAGTCCAAAGCAGACGAGTATTTCTGTTGTAGGGTTGTTGCTGATTGCACAAGTACATAGTTCTTACTCACTGATATTGCTTCAGTTCTCATGCTTTAAAAGTGTTTTTGATCAAAGATATTACCCTGTGAAATCTGCATCTCCCGATGGTTGCTTGATGATGATCGCAGACTAGTGATATGTTCTCAGCTTTAGTATTGTGATCGTGAGTCGTTACCCTGTGCCGACTTGCCTAAACATGCCCTTAGAGTTTTGTTTTTTGAGGCAAGAGTGTGCTAGTAGCTAATATTTGGTGACGAAAAATCTGTTCTTTGCCTAATAGATGATTTGTGTAAGGTAACATGATTTCCCCTTCCCCCATGTGGTTGAGCAAGTATGAATTCTCTGTCTCTAGTTCGATCAAAGACTAGTGTATTCTTTTCACCTTAGGCAGTATGTTTGATAGGGAGGAATTGTACGGGAAAGAAACAAAGAGAAAGGAATTAAGTGGCTTTTCCATGTTAGGTTTCAAAGCGTATGTGGGAGGACCCCCTGATTAATGTTCTTTCATCTTGCCGAGCAAGATTTTAATCTAACAAAGCAACAGACCCACTTTTATAGCAGTCTATTCTGAATCTTAGCATATCCAAGTCTATTTTCTAGTAGTTTATATAAAAATTCAATCAGTTCTGATCATTTTGAATTAGGTTTATCCCATTCCGCTTGGTTCATATTAGGGTGATATTCAGTTCTGGTTGAAAGGTCGAACCCATTAGGCTTGGTTCAAATTAGGGTTAACTTCATTTTGAGTTGAAATTTAGTTATTTAATATTCGGTATGGTTGGTTGGGGTGAGGAATGAGGATCGTATGATTGGTGATAAACACAGAAATTTGGTGGCCATATTTGATGCCTATGCCTCGTGGACAAGTTAAATGTGATTGCAATGCATACAAAAAAAACATTACTCCCTCCGTTCCACTCAGATTTCCCCATATTCCTAAAATGGATGTCCCATTGAGTTTGCCCATTCCCTTTATTGCATATTTTCCCTGCTCAACATCCCATGTGCTATCATAAGAAGACAAAAAAAGTCTCACAGGCTTTCAAATGAACCAACTCTTAAAAAAAAGTAAATTGGAAGGTATGGGGCAATCTTAGTGGGACAGAGAGTAAATTTTATTTACTTTTTATTTCTGTTCTGTTGATTTGGCTTTTCATGAATTAGGAATAAGAATAATACACGGGTGTAGGAATATACTTCGTATAAATCACGTCACTGTTGTCTAGTTTAATCTAAATAAAAACCTCACTTGAAGTTTGCTTTACTTCATGGTTGAAGGATTTCTTGCAATTACTCATAGTTTAGATCCGGGGTTTCCTATTTCTGTTGCAAATTCACATCTTTGTTGTATTGCAATATCACCCAATTGTTTGTTTGATGCAAATGCATTTGCTCAGAAATTTCACTGATTGTAACATACAATTGTATTTGTCTCATTTCACGGCATTTGTTTCCAACATTCATTTTCATGTTTGACTTGCTACTTGTGCTTGGAGTGTTAATTAGAGATAAGAGTGATGCTGTTGTTACTGCTCATTGGTAATTGTCCTTTTGGGTGTTTCAGATATTGATATGACTAGCCAAGGAGCGGCGCACCTAAAGCCTATGGGTAAGAAGATGAAAAAGAAATTGAAGATTGGTAAAGGCAAGAAGCGTGGCAACGGCAAGGGCAAAATCAGAAAGACTCACATTTGAGAAGTATGTGTCAGTCAACTTCAATGGATTAAGTTTGCACTCAAAACCTACACCACTCACTGACCCTTGTTCAAATTACAGTACTCTTGCCAGAAACTAAGCCTTCTTTTTAATTTATTTATAGCTAGTTTCATCATTTCCAGTCTTAGTAATCTCTTATATGTTAAAGTCTTGAGAACAATTAGGCATCACTATTAGGAATTGTTATAGCAAGGAAACGAGTTTGATGCAATGTGTTAACTTTCTATTGTAAAAAGTGGTTTTGTGATTGAAAATTTTGAGGCCTTGAAAGTTCTACTCACCTGATTTCACTTATTTTTCCCGAACTTATTAGAACTTATTTTAGTTATTAATTGTACTTTACCCTAGAACAGAGCCTATCGGGTATCATGAAAATGATTATCAGGACATTTGAAGCATTTTAGGAAATTAAATCAAATGTAATTGCTAAATTAGCATGAAAAGGTCATATATGATCAATTATAGAGGTGAACACAAGGATTCATTACGTGAAACTTTTGAGCACTCTTCTCCAAAAAATCAAAATGGGAAGTAGTGAAAGAAAGAAAGAACGAAGCAAAAGAAATTAGCAGTAATACATTATGATTTTATAAAGATTAATAACCGGAGTTAAGACGGCTACAATGCTGTCGAACTTCACCTTCACCATCATCTTGTGCGTCGCCTAAGATGTTTCCGAGCTTAACCATGGATGATGAGAACAAGTAAGGAAAGCTACCGCCATCGTCGTTTGCTAAAGTAGCAATGTATTCAGAAGTTCTGTGATCAGTATACAAGGCTTGATCTGAGTATAAGAGACCCATGTTTTTCTCAATATTCTTGTAGTATTCGTTGTCGAATGTGTATGGTGTTCTTGCATCAAGGTCTACATAATTGGTATCGTTCTTACATTTCCTTCTCAAGTAGTTCAAGTATGTTGGAGCCATTATTGTAGAGTGTAGCTTTCCATTTTCATCGTACCTTGATAGCCTGTTTTTAATAGCTCCACATGTACTCCTTCCGATGGTGTGTGCTCCTGAAGGATCAATGTACAAAGTGAGACCATGATATTGTTTTACATAACACTTCGTATATCCTAAACGTAGGAGGAGAATATTTTGCGTATGTTTTTTGTTTTTTAAGAGAATTTCTGTCTATATTCCAGGGGAAGAATATTCTGCGGAAGTTTAGGGTTTATTATTCGCGATGATAAAGGAGCGTTGTTAGTGGTGGGAGACAAGACTCTTTTACCTGGAAGACTCCATCTTATTTGCTTACTTCGACACTTCAAGAAGGAATCAAAAGTGCGGTAGCGATGGGTGCAAAAATCTCATTATTGAAGGAGATAACTTGGTGGTGATCAATTCAATGAACAAGTTGGAAGGTTTCGTGGGAGGTTAATGAGCTCGCTGAGATGTTAGGGGGGAGGGGTTTATCATATTTAAATTCATTTTCGGTCATTCATTGTTACCAAGAAACCAATCAAGCGGCGGATTTCTTGG ATAAGGTACTAGTTCACAAAGTGAGGTAAAAAGAAGGTACTTTTTGACAATTTTGCCTTTTAGATATTTACAAAAGTCCAACCTCCGTATAAATTATAAACCCTAGCCTCGCTCTGCCGAAAACCAACCGAAAACCCTCGGATTATCGTAAGAAAACTCACAGAAAAATGGCGAAATCACTGAGGTCGAAGAGAGAGAAAAGGCTGAGAGCAATCCGAAGAGAGATTGTTGAACCCTTTTACGAGAACAAAGATGCAGCCAAGCTTGCCGCACAACAAGCCGCCCTCTCCGCCCCTAAACTCGCCGTCCGCAACACAAATAACACCTCCATGGATGTCACCTCGTCCCTCCCACCATCTACCTCCAATCTTACGTCCAATCTTAGCATGGATATTGATATGACTAGCCAAGGAGCGGCGCACCTAAAGCCTATGGGTAAGAAGATGAAAAAGAAATTGAAGATTGGTAAAGGCAAGAAGCGTGGCAACGGCAAGGGCAAAATCAGAAAGACTCACATTTGAGAAGGGAAGAATATTCTGCGGAAGTTTAGGGTTTATTATTCGCGATGATAAAGGAGCGTTGTTAGTGGTGGGAGACAAGACTCTTTTACCTGGAAGACTCCATCTTATTTGCTTACTTCGACACTTCAAGAAGGAATCAAAAGTGCGGTAGCGATGGGTGCAAAAATCTCATTATTGAAGGAGATAACTTGGTGGTGATCAATTCAATGAACAAGTTGGAAGGTTTCGTGGGAGGTTAATGAGCTCGCTGAGATGTTAGGGGGGAGGGGTTTATCATATTTAAATTCATTTTCGGTCATTCATTGTTACCAAGAAACCAATCAAGCGGCGGATTTCTTGG ATGGCGAAATCACTGAGGTCGAAGAGAGAGAAAAGGCTGAGAGCAATCCGAAGAGAGATTGTTGAACCCTTTTACGAGAACAAAGATGCAGCCAAGCTTGCCGCACAACAAGCCGCCCTCTCCGCCCCTAAACTCGCCGTCCGCAACACAAATAACACCTCCATGGATGTCACCTCGTCCCTCCCACCATCTACCTCCAATCTTACGTCCAATCTTAGCATGGATATTGATATGACTAGCCAAGGAGCGGCGCACCTAAAGCCTATGGGTAAGAAGATGAAAAAGAAATTGAAGATTGGTAAAGGCAAGAAGCGTGGCAACGGCAAGGGCAAAATCAGAAAGACTCACATTTGA MAKSLRSKREKRLRAIRREIVEPFYENKDAAKLAAQQAALSAPKLAVRNTNNTSMDVTSSLPPSTSNLTSNLSMDIDMTSQGAAHLKPMGKKMKKKLKIGKGKKRGNGKGKIRKTHI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00920.1 vs. NCBI nr
Match: gi|902145842|gb|KNA05005.1| (hypothetical protein SOVF_194250 [Spinacia oleracea]) HSP 1 Score: 209.9 bits (533), Expect = 2.400e-51 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1
BLAST of Spo00920.1 vs. NCBI nr
Match: gi|731346139|ref|XP_010684297.1| (PREDICTED: uncharacterized protein LOC104898865 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 139.0 bits (349), Expect = 5.100e-30 Identity = 87/122 (71.31%), Postives = 97/122 (79.51%), Query Frame = 1
BLAST of Spo00920.1 vs. NCBI nr
Match: gi|951002428|ref|XP_014507335.1| (PREDICTED: uncharacterized protein LOC106767034 [Vigna radiata var. radiata]) HSP 1 Score: 118.2 bits (295), Expect = 9.400e-24 Identity = 77/122 (63.11%), Postives = 93/122 (76.23%), Query Frame = 1
BLAST of Spo00920.1 vs. NCBI nr
Match: gi|1012321672|gb|KYP34132.1| (hypothetical protein KK1_044953 [Cajanus cajan]) HSP 1 Score: 114.4 bits (285), Expect = 1.400e-22 Identity = 76/122 (62.30%), Postives = 95/122 (77.87%), Query Frame = 1
BLAST of Spo00920.1 vs. NCBI nr
Match: gi|388509308|gb|AFK42720.1| (unknown [Lotus japonicus]) HSP 1 Score: 110.9 bits (276), Expect = 1.500e-21 Identity = 70/118 (59.32%), Postives = 89/118 (75.42%), Query Frame = 1
BLAST of Spo00920.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCM5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_194250 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 1.600e-51 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1
BLAST of Spo00920.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ESL8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163300 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.600e-30 Identity = 87/122 (71.31%), Postives = 97/122 (79.51%), Query Frame = 1
BLAST of Spo00920.1 vs. UniProtKB/TrEMBL
Match: A0A151QV64_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_044953 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 9.400e-23 Identity = 76/122 (62.30%), Postives = 95/122 (77.87%), Query Frame = 1
BLAST of Spo00920.1 vs. UniProtKB/TrEMBL
Match: I3SR28_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.000e-21 Identity = 70/118 (59.32%), Postives = 89/118 (75.42%), Query Frame = 1
BLAST of Spo00920.1 vs. UniProtKB/TrEMBL
Match: A0A0L9T5A9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan107s003500 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.300e-21 Identity = 75/122 (61.48%), Postives = 93/122 (76.23%), Query Frame = 1
BLAST of Spo00920.1 vs. TAIR (Arabidopsis)
Match: AT1G30880.1 (unknown protein) HSP 1 Score: 59.7 bits (143), Expect = 1.400e-9 Identity = 54/113 (47.79%), Postives = 68/113 (60.18%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00920.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00920.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo00920.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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