Spo00927 (gene)

Overview
NameSpo00927
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_02065 : 92283 .. 94837 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATTTTCGCTATTTTTGCTGATTGTTGATGAGATTCTGTATGGCCATGTCCCATCGAAGGTGTGTTTTCTTTTGTCATTATTTATCCAGGACTATGGATTTCGTTTCATATGATATATAGGTGAGGCCTCATTCTTGTGTATATTCTGCAGATCTGCTTTCCTCCTTTGCTCCTTCCCACTCGCTCGAACCAAATCCAACACCAGGTATCATCAATATTTCTTCATCTTTACATCATCAAGTGATTTCTAAGTTGTTAATCTGATTTTATTTAAGTATTAAATTAGAGTAATGTGTGTTGCAGAGATGAAGATTATTGCCGCTTGCTTGTTGGTTGCTTTGGGCGGTAAAGCTTGCACTACTGCCGGTGATGTCAAGAAATTTTTTGGATCAGGTATTTTTTCTCGTCTTTTTTTCATAATGGAGCTTGATTGATGAAGATAATATGTAAAATATTTATGGAGCTTGAGTAAGGGGGGGCTTGATATGGGACTTTTCAACATGACAAAGAAGAAGATCGAAACTATTTATGAAGGTGATGACGTACGTTCTATTTTCTGCACTGCCTTGTGGTTTATGCCTATGTTTTAGTGGGTTATTATTTTCATTTTTTATTAAGTATTGTATCATCAAATGTAACTTTAATAATTTGCTTAATGTTGATGGGCTAAGTTTGTTTTTTCTGCGTGTATCATTAATACTTTTGTGCCCCTTCAATAATTCTCTTTATTATATTTTTTTGGTTTGAAGCAATGTAGGCACGGAATATGATTAAGACTTTTTGTGTAACTTATTCAAATAAGATCCATTTTTCTTTTATTTAAATTGTACTTGATGTATGACTATTGAATTCTATTAAGTATTTACATGCCTTATCTTGTTAGAGCATCCATAAATTATGTTCATGTTATCATGTATATACGAAATTACGAGTATGTACGAACACGATACAATTTATACATAACCAACATAGATATGAAAATTAGTTGTCTCCACTGCAATATAATTGTATAATCTGCAATGGAATGACAATATAAGCTCCTAAATGAAAAGAAACCAAGCAAACAAAAGACCTTGAATCTTTGGTTGAACGAAAGAATGTTATATCAACATTGATATCAAGAAAACTGGACAACTCATTTTTACTTTGTTAGCATATTCAATCCTTGTCATTCATTAAGGTAAATGTTGTTGTTATCTGACAACTTGTTACGCCATTGGTTGAAAATCGAATTCAATTTGTTACTAAGATATATCATACATGACCTTATATGACTTTTGGACACTTAGAAGGTTCGAACTACCTTGATTTGCTCTTATGAAGGTTTGCATTTGCTTATATAGTGGAGCAACTTTTGATATCTCTTGCATTTGTTCAAATGACATGGTTCTGTCTTTTTATCACTTCTGTCATACTTGCTTCTTTACTTTATCATCTATGTATATATTGGTTAGATCGTTGAAGAAAGTAATAGGCCCGTTAGCATGGTTGTTGACCAAAATTAAGGGGTTGTGTGTTTCGTGGGTTGTTCTTTGTTGATAAAATAATATGTCATGTTTTGAAAACATATCATATTAATTTTGCTGTTTCTGAGATGGGAAGAATTGTCAGTTGGCCTGTGGCACTAGGTTCTGGTAGATTGCCTTCTATGATATAATTTAGGAGCTATTGTGCAGCCTGTGAAAATCTGGTGCAAGATCATGCGCTAATACCTGTTGTGTTGTTCTTAAAACTATAATGTATGCAATATATTGTCTGCATCACTGTTGACAACCTATTAGTTCATATTTGTATATTTGCATTTTCTCTTTACTGGTTTGGTTATTTTTGCTTGAAAGAATCAAATATAAAAATTGAACTAATGAGAGTGATATAATTATAAGGAGGCAATGTGACTAGAATTAATGAGGCTAAGAATTATATCTCTTGATGTCTTTGAACTTCAGATTATTGAGCAGACTATGAATTGCATGCATTGCTATTATTGATGTCTGATTTTATAGTCGTTTTGGACTCCTGTCCTGATGACCGTCTTTTAGTTTATTTACTTTGTAAAACCTAGGAGTGTATGTGGCATAGATGTTCAGGAGTAAAAATTATCTAACTGTAAGGCATGACCTAAGACAATCAGTTTGGGACAGGCAATAAAGAGATTGAAGAGAGATGATACGCATACAATGGGTGTATGTGTTGGACCACATACAAAACAATCTCAGCCGTTAGATTTAGATCTGTCCAAAATTTTAGGCGGGGAAAAAGGGTGATAGAAGGCGGTAAAATTTTGGGATTTTCCCGGGTAATAGAAGAACGCAGCGGGAAGTTTTGGCATGGGCGCCAAACTTCTGCATAGAAAAATTGGAAGCGTGTTAATGAGTTAGATGATGTTGCATTATTTGTGGGGGACAATACTTCTATGTCTGTTCGTGCATCAAACTTTAGTAATTGCAAGAGCAATTGTATTTACTTCACCGATGATGAGTGGCAATTTTGGGATGCGTCGGAGGTTAAGGGGGGGCATGATATGGGACTTTTCAACATGACAAAAAAGAAG

mRNA sequence

ATGCTATTTTCGCTATTTTTGCTGATTGTTGATGAGATTCTGTATGGCCATGTCCCATCGAAGGTGAGGCCTCATTCTTGTGTATATTCTGCAGATCTGCTTTCCTCCTTTGCTCCTTCCCACTCGCTCGAACCAAATCCAACACCAGAGATGAAGATTATTGCCGCTTGCTTGTTGGTTGCTTTGGGCGGTAAAGCTTGCACTACTGCCGGTGATGTCAAGAAATTTTTTGGATCAGGTATTTTTTCTCGTCTTTTTTTCATAATGGAGCTTGATTGATGAAGATAATATGTAAAATATTTATGGAGCTTGAGTAAGGGGGGGCTTGATATGGGACTTTTCAACATGACAAAGAAGAAGATCGAAACTATTTATGAAGGTGATGACGTACGTTCTATTTTCTGCACTGCCTTGTGGTTTATGCCTATGTTTTAGTGGGTTATTATTTTCATTTTTTATTAAGTATTGTATCATCAAATGTAACTTTAATAATTTGCTTAATGTTGATGGGCTAAGTTTGTTTTTTCTGCGTGTATCATTAATACTTTTGTGCCCCTTCAATAATTCTCTTTATTATATTTTTTTGGTTTGAAGCAATGTAGGCACGGAATATGATTAAGACTTTTTGTGTAACTTATTCAAATAAGATCCATTTTTCTTTTATTTAAATTGTACTTGATGTATGACTATTGAATTCTATTAAGTATTTACATGCCTTATCTTGTTAGAGCATCCATAAATTATGTTCATGTTATCATGTATATACGAAATTACGAGTATGTACGAACACGATACAATTTATACATAACCAACATAGATATGAAAATTAGTTGTCTCCACTGCAATATAATTGTATAATCTGCAATGGAATGACAATATAAGCTCCTAAATGAAAAGAAACCAAGCAAACAAAAGACCTTGAATCTTTGGTTGAACGAAAGAATGTTATATCAACATTGATATCAAGAAAACTGGACAACTCATTTTTACTTTGTTAGCATATTCAATCCTTGTCATTCATTAAGGTAAATGTTGTTGTTATCTGACAACTTGTTACGCCATTGGTTGAAAATCGAATTCAATTTGTTACTAAGATATATCATACATGACCTTATATGACTTTTGGACACTTAGAAGGTTCGAACTACCTTGATTTGCTCTTATGAAGGTTTGCATTTGCTTATATAGTGGAGCAACTTTTGATATCTCTTGCATTTGTTCAAATGACATGGTTCTGTCTTTTTATCACTTCTGTCATACTTGCTTCTTTACTTTATCATCTATGTATATATTGGTTAGATCGTTGAAGAAAGTAATAGGCCCGTTAGCATGGTTGTTGACCAAAATTAAGGGGTTGTGTGTTTCGTGGGTTGTTCTTTGTTGATAAAATAATATGTCATGTTTTGAAAACATATCATATTAATTTTGCTGTTTCTGAGATGGGAAGAATTGTCAGTTGGCCTGTGGCACTAGGTTCTGGTAGATTGCCTTCTATGATATAATTTAGGAGCTATTGTGCAGCCTGTGAAAATCTGGTGCAAGATCATGCGCTAATACCTGTTGTGTTGTTCTTAAAACTATAATGTATGCAATATATTGTCTGCATCACTGTTGACAACCTATTAGTTCATATTTGTATATTTGCATTTTCTCTTTACTGGTTTGGTTATTTTTGCTTGAAAGAATCAAATATAAAAATTGAACTAATGAGAGTGATATAATTATAAGGAGGCAATGTGACTAGAATTAATGAGGCTAAGAATTATATCTCTTGATGTCTTTGAACTTCAGATTATTGAGCAGACTATGAATTGCATGCATTGCTATTATTGATGTCTGATTTTATAGTCGTTTTGGACTCCTGTCCTGATGACCGTCTTTTAGTTTATTTACTTTGTAAAACCTAGGAGTGTATGTGGCATAGATGTTCAGGAGTAAAAATTATCTAACTGTAAGGCATGACCTAAGACAATCAGTTTGGGACAGGCAATAAAGAGATTGAAGAGAGATGATACGCATACAATGGGTGTATGTGTTGGACCACATACAAAACAATCTCAGCCGTTAGATTTAGATCTGTCCAAAATTTTAGGCGGGGAAAAAGGGTGATAGAAGGCGGTAAAATTTTGGGATTTTCCCGGGTAATAGAAGAACGCAGCGGGAAGTTTTGGCATGGGCGCCAAACTTCTGCATAGAAAAATTGGAAGCGTGTTAATGAGTTAGATGATGTTGCATTATTTGTGGGGGACAATACTTCTATGTCTGTTCGTGCATCAAACTTTAGTAATTGCAAGAGCAATTGTATTTACTTCACCGATGATGAGTGGCAATTTTGGGATGCGTCGGAGGTTAAGGGGGGGCATGATATGGGACTTTTCAACATGACAAAAAAGAAG

Coding sequence (CDS)

ATGCTATTTTCGCTATTTTTGCTGATTGTTGATGAGATTCTGTATGGCCATGTCCCATCGAAGGTGAGGCCTCATTCTTGTGTATATTCTGCAGATCTGCTTTCCTCCTTTGCTCCTTCCCACTCGCTCGAACCAAATCCAACACCAGAGATGAAGATTATTGCCGCTTGCTTGTTGGTTGCTTTGGGCGGTAAAGCTTGCACTACTGCCGGTGATGTCAAGAAATTTTTTGGATCAGGTATTTTTTCTCGTCTTTTTTTCATAATGGAGCTTGATTGA

Protein sequence

MLFSLFLLIVDEILYGHVPSKVRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTAGDVKKFFGSGIFSRLFFIMELD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00927.1Spo00927.1mRNA


Homology
[Close]
BLAST of Spo00927.1 vs. NCBI nr
Match: gi|902194110|gb|KNA12455.1| (hypothetical protein SOVF_125880 isoform A [Spinacia oleracea])

HSP 1 Score: 151.4 bits (381), Expect = 7.900e-34
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 1 

		  

Query: 11  DEILYGHVPSKVRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA 70
           D+  Y  +  +VRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA
Sbjct: 179 DDFSYQTIDFEVRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA 238

Query: 71  GDVKKFFGSGIFSRLFFIMELD 93
           GDVKKFFGSGIFSRLFFIMELD
Sbjct: 239 GDVKKFFGSGIFSRLFFIMELD 260
[Close]
BLAST of Spo00927.1 vs. NCBI nr
Match: gi|902194111|gb|KNA12456.1| (hypothetical protein SOVF_125860 isoform B [Spinacia oleracea])

HSP 1 Score: 126.7 bits (317), Expect = 2.100e-26
Identity = 60/69 (86.96%), Postives = 63/69 (91.30%), Query Frame = 1 

		  

Query: 11  DEILYGHVPSKVRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA 70
           D+  Y  +  +VRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA
Sbjct: 179 DDFSYQTIDFEVRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA 238

Query: 71  GDVKKFFGS 80
           GDVKKFFGS
Sbjct: 239 GDVKKFFGS 247
[Close]
BLAST of Spo00927.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYW7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_125880 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.500e-34
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 1 

		  

Query: 11  DEILYGHVPSKVRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA 70
           D+  Y  +  +VRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA
Sbjct: 179 DDFSYQTIDFEVRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA 238

Query: 71  GDVKKFFGSGIFSRLFFIMELD 93
           GDVKKFFGSGIFSRLFFIMELD
Sbjct: 239 GDVKKFFGSGIFSRLFFIMELD 260
[Close]
BLAST of Spo00927.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0X0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_125860 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.400e-26
Identity = 60/69 (86.96%), Postives = 63/69 (91.30%), Query Frame = 1 

		  

Query: 11  DEILYGHVPSKVRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA 70
           D+  Y  +  +VRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA
Sbjct: 179 DDFSYQTIDFEVRPHSCVYSADLLSSFAPSHSLEPNPTPEMKIIAACLLVALGGKACTTA 238

Query: 71  GDVKKFFGS 80
           GDVKKFFGS
Sbjct: 239 GDVKKFFGS 247
[Close]
BLAST of Spo00927.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RL41_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_060360 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 8.200e-6
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 1 

		  

Query: 45 PNPTPEMKIIAACLLVALGGKACTTAGDVKK 76
          PNPTPEMKI+AACLL ALGGKAC T  D+KK
Sbjct: 14 PNPTPEMKIVAACLLSALGGKACPTVDDIKK 44
The following BLAST results are available for this feature:
BLAST of Spo00927.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 2
Match NameE-valueIdentityDescription
gi|902194110|gb|KNA12455.1|7.9e-3489.0hypothetical protein SOVF_1258... [more]
gi|902194111|gb|KNA12456.1|2.1e-2686.9hypothetical protein SOVF_1258... [more]
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BLAST of Spo00927.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0K9QYW7_SPIOL5.5e-3489.0Uncharacterized protein OS=Spi... [more]
A0A0K9R0X0_SPIOL1.4e-2686.9Uncharacterized protein OS=Spi... [more]
A0A0K9RL41_SPIOL8.2e-680.6Uncharacterized protein (Fragm... [more]
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BLAST of Spo00927.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00927.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1900140 regulation of seedling development
biological_process GO:0010584 pollen exine formation
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0048767 root hair elongation
biological_process GO:0010224 response to UV-B
biological_process GO:0002237 response to molecule of bacterial origin
biological_process GO:0048657 anther wall tapetum cell differentiation
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0060548 negative regulation of cell death
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0048366 leaf development
biological_process GO:0009729 detection of brassinosteroid stimulus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0071555 cell wall organization
biological_process GO:0009932 cell tip growth
biological_process GO:0009742 brassinosteroid mediated signaling pathway
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0010008 endosome membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005496 steroid binding
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo065740.76Barchart | Table
Spo169110.73Barchart | Table
Spo263520.72Barchart | Table
Spo148260.72Barchart | Table
Spo056270.71Barchart | Table
Spo018400.71Barchart | Table
Spo008630.71Barchart | Table
Spo049850.71Barchart | Table
Spo027490.70Barchart | Table
Spo112960.70Barchart | Table
Spo125430.70Barchart | Table
Spo088500.70Barchart | Table
Spo041790.70Barchart | Table
Spo109650.69Barchart | Table
Spo170320.69Barchart | Table
Spo079590.69Barchart | Table
Spo168010.68Barchart | Table
Spo166910.68Barchart | Table
Spo190480.68Barchart | Table
Spo201870.68Barchart | Table
Spo100180.68Barchart | Table
Spo270040.68Barchart | Table
Spo004860.67Barchart | Table
Spo046570.67Barchart | Table
Spo066890.67Barchart | Table
Spo093500.67Barchart | Table
Spo113530.67Barchart | Table
Spo131410.67Barchart | Table
Spo152730.67Barchart | Table
Spo158420.67Barchart | Table
Spo169190.67Barchart | Table
Spo172200.67Barchart | Table
Spo179080.67Barchart | Table
Spo187760.67Barchart | Table
Spo206390.67Barchart | Table
Spo245660.67Barchart | Table
Spo267890.67Barchart | Table
Spo062410.66Barchart | Table
Spo051350.66Barchart | Table
Spo242940.66Barchart | Table
Spo178220.66Barchart | Table
Spo268060.66Barchart | Table
Spo031070.66Barchart | Table
Spo050930.66Barchart | Table
Spo039370.66Barchart | Table
Spo018090.66Barchart | Table
Spo142400.66Barchart | Table
Spo078920.66Barchart | Table
Spo242870.66Barchart | Table
Spo154200.66Barchart | Table
Spo154470.66Barchart | Table
Spo225290.66Barchart | Table
Spo124230.66Barchart | Table
Spo208580.65Barchart | Table
Spo166800.65Barchart | Table