Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGCTCGTAGTTGGACCTTGGGGTGGTACGACCGGTCCGCCTTTTGGTGTGCACCGGCCGTCTCGCCTCTTTCGCCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTANAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTACTTTTAGGACGCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCT AAAAAGCTCGTAGTTGGACCTTGGGGTGGTACGACCGGTCCGCCTTTTGGTGTGCACCGGCCGTCTCGCCTCTTTCGCCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTACGAACAATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTACTTTTAGGACGCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCT AAAAAGCTCGTAGTTGGACCTTGGGGTGGTACGACCGGTCCGCCTTTTGGTGTGCACCGGCCGTCTCGCCTCTTTCGCCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTACGAACAATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTACTTTTAGGACGCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCT KKLVVGPWGGTTGPPFGVHRPSRLFRRRCAPGLNWPGRASGTVTLKKLECSKQAYALRTIAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLGSGGSMVARLKLKGIDGRAPPGVEPAA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00936.1 vs. NCBI nr
Match: gi|823127874|ref|XP_012440607.1| (PREDICTED: uncharacterized protein LOC105765883 [Gossypium raimondii]) HSP 1 Score: 228.0 bits (580), Expect = 1.000e-56 Identity = 116/139 (83.45%), Postives = 121/139 (87.05%), Query Frame = 1
BLAST of Spo00936.1 vs. NCBI nr
Match: gi|703137890|ref|XP_010106597.1| (hypothetical protein L484_002552 [Morus notabilis]) HSP 1 Score: 225.7 bits (574), Expect = 5.100e-56 Identity = 118/138 (85.51%), Postives = 119/138 (86.23%), Query Frame = 1
BLAST of Spo00936.1 vs. NCBI nr
Match: gi|823218726|ref|XP_012442053.1| (PREDICTED: uncharacterized protein LOC105767074 [Gossypium raimondii]) HSP 1 Score: 216.5 bits (550), Expect = 3.100e-53 Identity = 109/135 (80.74%), Postives = 113/135 (83.70%), Query Frame = 1
BLAST of Spo00936.1 vs. NCBI nr
Match: gi|694380941|ref|XP_009366572.1| (PREDICTED: uncharacterized protein LOC103956333 [Pyrus x bretschneideri]) HSP 1 Score: 216.1 bits (549), Expect = 4.000e-53 Identity = 114/142 (80.28%), Postives = 116/142 (81.69%), Query Frame = 1
BLAST of Spo00936.1 vs. NCBI nr
Match: gi|922327155|ref|XP_013442970.1| (hypothetical protein MTR_0055s0130 [Medicago truncatula]) HSP 1 Score: 211.8 bits (538), Expect = 7.600e-52 Identity = 113/143 (79.02%), Postives = 117/143 (81.82%), Query Frame = 1
BLAST of Spo00936.1 vs. UniProtKB/TrEMBL
Match: M1DUP9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400044276 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 4.200e-57 Identity = 120/141 (85.11%), Postives = 120/141 (85.11%), Query Frame = 1
BLAST of Spo00936.1 vs. UniProtKB/TrEMBL
Match: W9SJ11_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002552 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.500e-56 Identity = 118/138 (85.51%), Postives = 119/138 (86.23%), Query Frame = 1
BLAST of Spo00936.1 vs. UniProtKB/TrEMBL
Match: M1DB49_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400035737 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.400e-52 Identity = 111/130 (85.38%), Postives = 113/130 (86.92%), Query Frame = 1
BLAST of Spo00936.1 vs. UniProtKB/TrEMBL
Match: A0A072TTW7_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_0055s0130 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 5.300e-52 Identity = 113/143 (79.02%), Postives = 117/143 (81.82%), Query Frame = 1
BLAST of Spo00936.1 vs. UniProtKB/TrEMBL
Match: A0A0R0GPK3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G016700 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 3.400e-51 Identity = 113/143 (79.02%), Postives = 116/143 (81.12%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00936.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00936.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00936.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo00936.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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