Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAATAAATCAAGACAGAGAAGTCTAGAAACTTAAAAAGCTGTACCTATAAATATTCTATTCTGGATAGTTCGACTTTCATCAGCAAAACAAAACAAAACAACCAAAGCTTTAATTATCTCCTCTCATAGTTTGATCTTTAATTACATTCTACAAAATTTGAAAAAGTTTAACAGAAATGGGAATCAAGATTCATGGAAGTCCTCTCTCCACCGCCACCCTCCGTGTCGTGGCGGCGGTTCATGAGAAAGAGCTTGACTATGAGTTTGTTACCGTCGACATGAAAACCGGTGCTCATAAGCAAGAGCCTTTCATCTCTCTTAATGTAAGTTTTTCTCCTTTTTTGATCTATATATTTTCTCGATCTGGAAATTAATAGGTGAATAGTAATACATGTATGATTCCTTATATTATCATGATAATCTTTATTCATATATATTTCGCATACTCTGTATTAGATTATACTAAAATTGAGATTAATCTAGCAAGATCTTGTAGTTAGAGTTTTCAATTTTTATGTTGATGTAGTAGTGTAGTACTATAACGAATCGGTGTTACTTATTGGAATTATTTGTTCATTTTAAACAATTTTAATTTAAATACATACTCTGTTGTGTTTATAGGTAGTAACTAAATGTTATGTATAATCTTTAAAATGATTTGTTAAAGATGATTAGATAATGGATGATGTAGTGGTTACATTTCAACCAAAGTTGAATAGTCAATCGAGAGCAACCACCCCAATTGACTAATTGAGAATGACCGGATGAATAGGGTTATATACTTATATCGTTATTAATTCCCCAATTGTGATACTATATTAGCTCATTACTATTTGAGAGTGATGGATAGCTCAGTTGGTAGAGCTTCTATCCCGATTCCAGGTGATCCTCATCCCCGCCCTTGTGGCTCATTTGCACCAAAAAAATTACTGTTTATACACTGGGGATGTTAACGATTTAACACCGCTCATCGTGAAAATAATGGAAAAAGTTTTGCCTATATGTATTTATTTGTGGATTATGTGTAGTGTGCACTATGCATCATGTTGAAAAAAGCTGATGTTGCATCATTTTATTGATTGGAGACTATTGTTCAATTGAGTTGTTGTCCTGAGGGTCATGTGATTGTGACCTACGAAGTATGTCAAAGATAAAACTAACTTCACAGATGTAAAACGTGTACCTTGAACAAAAATCAATGTTGATTATTTACATCTGTAAAGTAGAGCATACCCCTCCATTTTGCTTCATGATTCACCTCTTGACATGGACCATCCTTGTGCAACAAATTAAATTAAACAATAACCCCATTCAAATTTATGATCAAGGTTTTCATGTTTTGGAGTGTGTAGTACTTTTTTCTTTTTATTTGTAAAAACTTTTACCCTAAGTTGGTAACATTTGGTTTGATCCCTATAGAACATCTTCTTACAATTTTCATATTGCAGCCATTTGGTCAAGTTCCAGCTCTAGAGGATGGAGATGTCAAGTTATTTGGTAAGACAAGCCTTACCTACACAATGATTATTCATGAAATCACAATGTTTTGATTAGTTGTTTTCATGTTTTGATACCAAATATGCTCATTTTTGTAACAGAGTCAAGGGCTATTACAAAATACATAGCATACAACTATGATACCCAAGGAACTCCTCTTGTATACAAAGAAGGAAAGGAAATGGCAGACTTGGCCGTTTGGATGGAAGTCGAGGCTCACCAATTCGATTCAGTAGCCAGTAAACTCGCTTGGGAGCTTGTCTACAAGGGTATGTTCGGTATGCAAACCGACAACGCTGTAGTTGAAGAGAACGAGGCTAAGTTAGTTAAGATCCTTGATGTTTATGAGACTCGTTTGTCAAAGTCCAAGTATTTGGCTGGTGATTCCTTCACTTTGGCTGATCTTCATCACTTGCCAACCCTGCATTACGTGTTGAGCACAAAAGAGAAGAAGTTATTCGACGAACGTCCCCATGTGAGTGCTTGGTGCACGGATATCTTGGCTAGGCCATCTTGGGAGAAGTCCTTGGCTTTGCAGAAACAAGCTTAAGGTTACATTACCGTGGTTTAGTTCCCGGCTGTGTTGCTGTGTGATGTACCCAATCTTGTTTATTACTTTCTATGTGGATGTGTTTGTTAGTTGTGTACTTATATTTCGAATAAATAAAATCACCAGTCCTTTTTAAGTTAAGAAATTATATCAAGTATTTCTTATGAGATGAACAACAGAACAATATGAGTACATGATTATTGTATTTCTCCCAGTTTTTAACTTGGCTCGTGATCTGTTAAATACTTAGTGTTCCCTTCGTCATACAATATTGGAAATGGCTTGGATAACCTTACACATGCTATAACATGTGACTTTTTAGTTGTGATATGATCTAATAATACCAAGTATTGAAGTATATGTTATCGCATCTAAGAATATCCTATCTTTTAT AGAAATAAATCAAGACAGAGAAGTCTAGAAACTTAAAAAGCTGTACCTATAAATATTCTATTCTGGATAGTTCGACTTTCATCAGCAAAACAAAACAAAACAACCAAAGCTTTAATTATCTCCTCTCATAGTTTGATCTTTAATTACATTCTACAAAATTTGAAAAAGTTTAACAGAAATGGGAATCAAGATTCATGGAAGTCCTCTCTCCACCGCCACCCTCCGTGTCGTGGCGGCGGTTCATGAGAAAGAGCTTGACTATGAGTTTGTTACCGTCGACATGAAAACCGGTGCTCATAAGCAAGAGCCTTTCATCTCTCTTAATCCATTTGGTCAAGTTCCAGCTCTAGAGGATGGAGATGTCAAGTTATTTGAGTCAAGGGCTATTACAAAATACATAGCATACAACTATGATACCCAAGGAACTCCTCTTGTATACAAAGAAGGAAAGGAAATGGCAGACTTGGCCGTTTGGATGGAAGTCGAGGCTCACCAATTCGATTCAGTAGCCAGTAAACTCGCTTGGGAGCTTGTCTACAAGGGTATGTTCGGTATGCAAACCGACAACGCTGTAGTTGAAGAGAACGAGGCTAAGTTAGTTAAGATCCTTGATGTTTATGAGACTCGTTTGTCAAAGTCCAAGTATTTGGCTGGTGATTCCTTCACTTTGGCTGATCTTCATCACTTGCCAACCCTGCATTACGTGTTGAGCACAAAAGAGAAGAAGTTATTCGACGAACGTCCCCATGTGAGTGCTTGGTGCACGGATATCTTGGCTAGGCCATCTTGGGAGAAGTCCTTGGCTTTGCAGAAACAAGCTTAAGGTTACATTACCGTGGTTTAGTTCCCGGCTGTGTTGCTGTGTGATGTACCCAATCTTGTTTATTACTTTCTATGTGGATGTGTTTGTTAGTTGTGTACTTATATTTCGAATAAATAAAATCACCAGTCCTTTTTAAGTTAAGAAATTATATCAAGTATTTCTTATGAGATGAACAACAGAACAATATGAGTACATGATTATTGTATTTCTCCCAGTTTTTAACTTGGCTCGTGATCTGTTAAATACTTAGTGTTCCCTTCGTCATACAATATTGGAAATGGCTTGGATAACCTTACACATGCTATAACATGTGACTTTTTAGTTGTGATATGATCTAATAATACCAAGTATTGAAGTATATGTTATCGCATCTAAGAATATCCTATCTTTTAT ATGGGAATCAAGATTCATGGAAGTCCTCTCTCCACCGCCACCCTCCGTGTCGTGGCGGCGGTTCATGAGAAAGAGCTTGACTATGAGTTTGTTACCGTCGACATGAAAACCGGTGCTCATAAGCAAGAGCCTTTCATCTCTCTTAATCCATTTGGTCAAGTTCCAGCTCTAGAGGATGGAGATGTCAAGTTATTTGAGTCAAGGGCTATTACAAAATACATAGCATACAACTATGATACCCAAGGAACTCCTCTTGTATACAAAGAAGGAAAGGAAATGGCAGACTTGGCCGTTTGGATGGAAGTCGAGGCTCACCAATTCGATTCAGTAGCCAGTAAACTCGCTTGGGAGCTTGTCTACAAGGGTATGTTCGGTATGCAAACCGACAACGCTGTAGTTGAAGAGAACGAGGCTAAGTTAGTTAAGATCCTTGATGTTTATGAGACTCGTTTGTCAAAGTCCAAGTATTTGGCTGGTGATTCCTTCACTTTGGCTGATCTTCATCACTTGCCAACCCTGCATTACGTGTTGAGCACAAAAGAGAAGAAGTTATTCGACGAACGTCCCCATGTGAGTGCTTGGTGCACGGATATCTTGGCTAGGCCATCTTGGGAGAAGTCCTTGGCTTTGCAGAAACAAGCTTAA MGIKIHGSPLSTATLRVVAAVHEKELDYEFVTVDMKTGAHKQEPFISLNPFGQVPALEDGDVKLFESRAITKYIAYNYDTQGTPLVYKEGKEMADLAVWMEVEAHQFDSVASKLAWELVYKGMFGMQTDNAVVEENEAKLVKILDVYETRLSKSKYLAGDSFTLADLHHLPTLHYVLSTKEKKLFDERPHVSAWCTDILARPSWEKSLALQKQA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00983.1 vs. NCBI nr
Match: gi|902190159|gb|KNA11546.1| (hypothetical protein SOVF_134140 [Spinacia oleracea]) HSP 1 Score: 436.0 bits (1120), Expect = 3.700e-119 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Spo00983.1 vs. NCBI nr
Match: gi|731370642|ref|XP_010665785.1| (PREDICTED: glutathione S-transferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 368.2 bits (944), Expect = 9.500e-99 Identity = 175/214 (81.78%), Postives = 193/214 (90.19%), Query Frame = 1
BLAST of Spo00983.1 vs. NCBI nr
Match: gi|902188099|gb|KNA11070.1| (hypothetical protein SOVF_138530 [Spinacia oleracea]) HSP 1 Score: 349.4 bits (895), Expect = 4.600e-93 Identity = 165/213 (77.46%), Postives = 189/213 (88.73%), Query Frame = 1
BLAST of Spo00983.1 vs. NCBI nr
Match: gi|731375679|ref|XP_010667331.1| (PREDICTED: glutathione S-transferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 341.3 bits (874), Expect = 1.200e-90 Identity = 162/214 (75.70%), Postives = 182/214 (85.05%), Query Frame = 1
BLAST of Spo00983.1 vs. NCBI nr
Match: gi|731345745|ref|XP_010684078.1| (PREDICTED: glutathione S-transferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 332.0 bits (850), Expect = 7.600e-88 Identity = 157/214 (73.36%), Postives = 181/214 (84.58%), Query Frame = 1
BLAST of Spo00983.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYD9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_134140 PE=3 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 2.600e-119 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Spo00983.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E0F9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g201810 PE=3 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 6.600e-99 Identity = 175/214 (81.78%), Postives = 193/214 (90.19%), Query Frame = 1
BLAST of Spo00983.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUY9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138530 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.200e-93 Identity = 165/213 (77.46%), Postives = 189/213 (88.73%), Query Frame = 1
BLAST of Spo00983.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B382_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_008080 PE=3 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 8.700e-91 Identity = 162/214 (75.70%), Postives = 182/214 (85.05%), Query Frame = 1
BLAST of Spo00983.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ESU8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161860 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 5.300e-88 Identity = 157/214 (73.36%), Postives = 181/214 (84.58%), Query Frame = 1
BLAST of Spo00983.1 vs. ExPASy Swiss-Prot
Match: GSTF_SILVU (Glutathione S-transferase OS=Silene vulgaris GN=GST PE=1 SV=3) HSP 1 Score: 312.8 bits (800), Expect = 3.000e-84 Identity = 152/217 (70.05%), Postives = 180/217 (82.95%), Query Frame = 1
BLAST of Spo00983.1 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 1.900e-75 Identity = 131/208 (62.98%), Postives = 166/208 (79.81%), Query Frame = 1
BLAST of Spo00983.1 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 2.500e-75 Identity = 131/213 (61.50%), Postives = 171/213 (80.28%), Query Frame = 1
BLAST of Spo00983.1 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 8.100e-74 Identity = 130/213 (61.03%), Postives = 168/213 (78.87%), Query Frame = 1
BLAST of Spo00983.1 vs. ExPASy Swiss-Prot
Match: GSTF8_ARATH (Glutathione S-transferase F8, chloroplastic OS=Arabidopsis thaliana GN=GSTF8 PE=1 SV=3) HSP 1 Score: 270.0 bits (689), Expect = 2.200e-71 Identity = 129/212 (60.85%), Postives = 164/212 (77.36%), Query Frame = 1
BLAST of Spo00983.1 vs. TAIR (Arabidopsis)
Match: AT2G47730.1 (glutathione S-transferase phi 8) HSP 1 Score: 270.0 bits (689), Expect = 1.200e-72 Identity = 129/212 (60.85%), Postives = 164/212 (77.36%), Query Frame = 1
BLAST of Spo00983.1 vs. TAIR (Arabidopsis)
Match: AT1G02920.1 (glutathione S-transferase 7) HSP 1 Score: 265.8 bits (678), Expect = 2.300e-71 Identity = 127/207 (61.35%), Postives = 156/207 (75.36%), Query Frame = 1
BLAST of Spo00983.1 vs. TAIR (Arabidopsis)
Match: AT1G02930.1 (glutathione S-transferase 6) HSP 1 Score: 263.1 bits (671), Expect = 1.500e-70 Identity = 126/207 (60.87%), Postives = 157/207 (75.85%), Query Frame = 1
BLAST of Spo00983.1 vs. TAIR (Arabidopsis)
Match: AT2G02930.1 (glutathione S-transferase F3) HSP 1 Score: 261.9 bits (668), Expect = 3.400e-70 Identity = 126/210 (60.00%), Postives = 158/210 (75.24%), Query Frame = 1
BLAST of Spo00983.1 vs. TAIR (Arabidopsis)
Match: AT4G02520.1 (glutathione S-transferase PHI 2) HSP 1 Score: 257.3 bits (656), Expect = 8.300e-69 Identity = 122/208 (58.65%), Postives = 157/208 (75.48%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00983.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00983.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00983.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo00983.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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