Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTAATGAAACAACTTACTACTTTGTCTCTTCACCATTTAACTCTAATTAAATACACTTAATTGGTAGGCATGGGAATCAAGGTTCATGGAATCCCTCACGGTGCCACCCTCCGTGTTTTGGCCGCTCTTGAAGAGAAGGAGATCGATTTCGAATTGGTTACCGTCGATTTGAGAACCGGTGCCCACAAACAACCACCTTTTCTTTCCCTCAACGTAAGCGCACCCTATTTTGTTGTCCATTCAAACTATGATCTATTCTAACTATTTTACTTTCATTTGTTTCAAATCAAATATGTTCAAATAATATAATTTCGTACTTCGGGCTATATAATAAGGTAAGATAATCATTTATATAAATGATCCAGTATGAGTTATATGGACTTATTGAAGTAAATAACTAAATGATGATCTATAGACCTCAAATCCATGTTATGTTTATATATTATTTTATGTTATATGTATCTTAGGGGTTGACAACCCTTAGGGTCAACCAAACGTTTTTCATTTTTCTTTGTTACTATAAGAGTTATTTATTTATTTATTTTTTTAAATAATAAGGACGGGCCGGTATAGTTTGACTTGTCACACAACATCTACATTTAATCATGTATAGTTTTATTCGTCCCTTAAATATTATGAAAATTATAAAGTTCGCAACTTGCGGCCTTTAAACCGTATTACAATGATGACATGACATGCTTATGTGCCATGAATGTAATTGAAAACTAAAATATGTAACTTATACAAACTATTATACGTGTTACAAAAAATGTAGAAAAATCTTACTTATAAATATTTGTTTTCTTTTTTGTTCTACTACTTATTTACCTATTTTAATAGTAAAAATATTGCATTGATAATAAAAATATTTTGATGATGCATGGCTTATGTGGCGTCTATATGTACCATTTAAAATACGACGCATGAGATTGCGACAAACTAAATGTTGTCGCAACTTGTGACTTTTATCATCACCAATATTATTCCTTTTAAGTTTCTACGGTCTCTGAAAATGACTTAAAGCTAAATATCTACTTTGTATAATTCTATATACGCAACAATCATAAAAGATAAATATTTTAAAAATGACGAATCTTACACTACAAGAATTTGTATCTTTAATGACAACCTAATTACGACGGGTCAAAAATCCCGTCGCAAAAGCCTTTTGCGACGGGGCTAACAACCAAACAATGACGGGAATAACCGTCGCAAATGTCTTTTACGACGGGTTTACGGCGGATTTACGACGAGATTTTCTATTAACGACGACCCCCTTTTATGACGGGTTCGCGACAGGAAATCCCGTTGTTAATCAACGATTATTGGCCTTTTGCGACGGGATTTCCCGTCGTTAATAGTACAATTTCTTGTAGTGTTATATGACTGCCAAGTGCCAATTACAGTATGAACTAGATTAGATCCCGTGCACGCACGAATTTTGATCATTTTTTCACAAATTATTTAACGGATTATCTCCCAAACTACTACATAGTTATAACATTTTTAACATCCTCGTTTAAATTTATTCATCTAATGTGCATATTTAAAATGCTAATATGGTAATTTGAACAATATATCGAGTGATATATTTTCCATTATTAATATAGCGATTTGATTAAAATATTACAAATTTAGAATAATTATTATGGCGTATCTATTATTGCCATATTTTATAAACTAAATTTTGTTTCCATACATAAATAGTTTATAAAAAAATAAAAATAAAAAATATAAAACAGATACACTTTTGTAGGAAAGTGGTTTTTGGCGGGAAAAAATCACACCAGGAATTGACATGTGTCATTCCTGGTGTCTATTTAAGTATATAGTAATAGATAGATTAAATTGGGTCAATTAAATTAAATTGGGTCAATTTGTTAGGGACGGAAGGAGTACAATATATTTTACAAAGTTGTTCTTCAATAGTGAGTTACAAGTCTTACAACACATGTAGCTCAAATGACCTCACATGTCAACGTCAATCAATAATATAATTGGAAGTTGTTGTGTTTGTGTTGATATCGAATTACAACGAACTACATACTTCACTGGTTTAGCAGGTTCTTTGATCTAAAAAACAACATATTTATTGATTCTGTTTTTGTCATGTAATTTTCAGCCATTTGGTCAAATTCCAGCTTTTGAAGATGGAGATCTCAAGCTATTTGGTACGACATACATGCAACTTAACTTCTATTAAATCCGTTTTTGAAAGTTGTTTACCTATAATTAATTAAATCATCAAATTAATTGAATATCTTAAACTATATTTTTGCCTATATGTTAAACAGAATCAAGGGCAATTACAAAATACATAGCATGCAACTATGAAAGCCAAGGAACTCCCTTAGTAAAGAAAGAAGGAAAACAAATGGCAGACTTAGCCATATGGTTGGAAGTTGAGGCTCACCAATTCGATCCAGTAGCCACTAAACTCAACTATGAGCTTGTTTACAAGACTTTCATGGGCTTGGAAACCGGCAATGCTATAGTCGAGGAGAACGAAGCTAAGTTTGCTAAGATCCTCAATGTTTACGAGGCTCGATTGGCAAACTCCAAGTACCTAGCTGGTGACTCCTTCACTTTGGCTGATCTTCATCATTTGCCTGGACTTCAATACATGCAGGCTACAAAAGTGAAGCAATTGCTTGATGAACGTCCTCACGTGAGTGCTTGGCGCAAGGATATCTTGGCTAGGCCAGCATGGGCAAAGGTTGTGGCCTTGCAAAAAGAAACCTAAAGACAATACCCCCTCCGTCCTTAAATATTTTTCCAGTTTGTCATTTTATGAGTTATTGAGGAGAGGGGATATTACAAGATTATCAATTATTGTTGTATTTTATGGGAAATTGCATGTTGTTCTTTTTAATTCATTTTTCACAAGAAAATAAAACTGTTGTAACAGTTGTGAGCCAATGGAATTAAGAAATAAAAGTGTTAACTCATTATTCCATCTAAAGTTGACACAAACAATGAGATTACAAGGTATTTTACAGGGCCGGTCCACTTTTTTGTGGCCTAAGCTATGGGTGAAACAAAAAAAATTGAGGCCTTACTTTTAAAGGTACACGGA ACTAATGAAACAACTTACTACTTTGTCTCTTCACCATTTAACTCTAATTAAATACACTTAATTGGTAGGCATGGGAATCAAGGTTCATGGAATCCCTCACGGTGCCACCCTCCGTGTTTTGGCCGCTCTTGAAGAGAAGGAGATCGATTTCGAATTGGTTACCGTCGATTTGAGAACCGGTGCCCACAAACAACCACCTTTTCTTTCCCTCAACCCATTTGGTCAAATTCCAGCTTTTGAAGATGGAGATCTCAAGCTATTTGAATCAAGGGCAATTACAAAATACATAGCATGCAACTATGAAAGCCAAGGAACTCCCTTAGTAAAGAAAGAAGGAAAACAAATGGCAGACTTAGCCATATGGTTGGAAGTTGAGGCTCACCAATTCGATCCAGTAGCCACTAAACTCAACTATGAGCTTGTTTACAAGACTTTCATGGGCTTGGAAACCGGCAATGCTATAGTCGAGGAGAACGAAGCTAAGTTTGCTAAGATCCTCAATGTTTACGAGGCTCGATTGGCAAACTCCAAGTACCTAGCTGGTGACTCCTTCACTTTGGCTGATCTTCATCATTTGCCTGGACTTCAATACATGCAGGCTACAAAAGTGAAGCAATTGCTTGATGAACGTCCTCACGTGAGTGCTTGGCGCAAGGATATCTTGGCTAGGCCAGCATGGGCAAAGGTTGTGGCCTTGCAAAAAGAAACCTAAAGACAATACCCCCTCCGTCCTTAAATATTTTTCCAGTTTGTCATTTTATGAGTTATTGAGGAGAGGGGATATTACAAGATTATCAATTATTGTTGTATTTTATGGGAAATTGCATGTTGTTCTTTTTAATTCATTTTTCACAAGAAAATAAAACTGTTGTAACAGTTGTGAGCCAATGGAATTAAGAAATAAAAGTGTTAACTCATTATTCCATCTAAAGTTGACACAAACAATGAGATTACAAGGTATTTTACAGGGCCGGTCCACTTTTTTGTGGCCTAAGCTATGGGTGAAACAAAAAAAATTGAGGCCTTACTTTTAAAGGTACACGGA ATGGGAATCAAGGTTCATGGAATCCCTCACGGTGCCACCCTCCGTGTTTTGGCCGCTCTTGAAGAGAAGGAGATCGATTTCGAATTGGTTACCGTCGATTTGAGAACCGGTGCCCACAAACAACCACCTTTTCTTTCCCTCAACCCATTTGGTCAAATTCCAGCTTTTGAAGATGGAGATCTCAAGCTATTTGAATCAAGGGCAATTACAAAATACATAGCATGCAACTATGAAAGCCAAGGAACTCCCTTAGTAAAGAAAGAAGGAAAACAAATGGCAGACTTAGCCATATGGTTGGAAGTTGAGGCTCACCAATTCGATCCAGTAGCCACTAAACTCAACTATGAGCTTGTTTACAAGACTTTCATGGGCTTGGAAACCGGCAATGCTATAGTCGAGGAGAACGAAGCTAAGTTTGCTAAGATCCTCAATGTTTACGAGGCTCGATTGGCAAACTCCAAGTACCTAGCTGGTGACTCCTTCACTTTGGCTGATCTTCATCATTTGCCTGGACTTCAATACATGCAGGCTACAAAAGTGAAGCAATTGCTTGATGAACGTCCTCACGTGAGTGCTTGGCGCAAGGATATCTTGGCTAGGCCAGCATGGGCAAAGGTTGTGGCCTTGCAAAAAGAAACCTAA MGIKVHGIPHGATLRVLAALEEKEIDFELVTVDLRTGAHKQPPFLSLNPFGQIPAFEDGDLKLFESRAITKYIACNYESQGTPLVKKEGKQMADLAIWLEVEAHQFDPVATKLNYELVYKTFMGLETGNAIVEENEAKFAKILNVYEARLANSKYLAGDSFTLADLHHLPGLQYMQATKVKQLLDERPHVSAWRKDILARPAWAKVVALQKET Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00988.1 vs. NCBI nr
Match: gi|902193533|gb|KNA12318.1| (hypothetical protein SOVF_127010, partial [Spinacia oleracea]) HSP 1 Score: 433.7 bits (1114), Expect = 1.800e-118 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
BLAST of Spo00988.1 vs. NCBI nr
Match: gi|731375679|ref|XP_010667331.1| (PREDICTED: glutathione S-transferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 345.5 bits (885), Expect = 6.600e-92 Identity = 165/213 (77.46%), Postives = 186/213 (87.32%), Query Frame = 1
BLAST of Spo00988.1 vs. NCBI nr
Match: gi|902188099|gb|KNA11070.1| (hypothetical protein SOVF_138530 [Spinacia oleracea]) HSP 1 Score: 342.4 bits (877), Expect = 5.600e-91 Identity = 163/213 (76.53%), Postives = 191/213 (89.67%), Query Frame = 1
BLAST of Spo00988.1 vs. NCBI nr
Match: gi|731345745|ref|XP_010684078.1| (PREDICTED: glutathione S-transferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 331.3 bits (848), Expect = 1.300e-87 Identity = 161/213 (75.59%), Postives = 182/213 (85.45%), Query Frame = 1
BLAST of Spo00988.1 vs. NCBI nr
Match: gi|731355566|ref|XP_010689209.1| (PREDICTED: glutathione S-transferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 330.5 bits (846), Expect = 2.200e-87 Identity = 162/213 (76.06%), Postives = 182/213 (85.45%), Query Frame = 1
BLAST of Spo00988.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R042_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_127010 PE=3 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 1.300e-118 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
BLAST of Spo00988.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B382_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_008080 PE=3 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 4.600e-92 Identity = 165/213 (77.46%), Postives = 186/213 (87.32%), Query Frame = 1
BLAST of Spo00988.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUY9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138530 PE=3 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 3.900e-91 Identity = 163/213 (76.53%), Postives = 191/213 (89.67%), Query Frame = 1
BLAST of Spo00988.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ESU8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161860 PE=3 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 8.900e-88 Identity = 161/213 (75.59%), Postives = 182/213 (85.45%), Query Frame = 1
BLAST of Spo00988.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BQR3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206010 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.500e-87 Identity = 162/213 (76.06%), Postives = 182/213 (85.45%), Query Frame = 1
BLAST of Spo00988.1 vs. ExPASy Swiss-Prot
Match: GSTF_SILVU (Glutathione S-transferase OS=Silene vulgaris GN=GST PE=1 SV=3) HSP 1 Score: 267.7 bits (683), Expect = 1.100e-70 Identity = 133/216 (61.57%), Postives = 164/216 (75.93%), Query Frame = 1
BLAST of Spo00988.1 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.100e-70 Identity = 123/208 (59.13%), Postives = 162/208 (77.88%), Query Frame = 1
BLAST of Spo00988.1 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 1.900e-67 Identity = 120/206 (58.25%), Postives = 157/206 (76.21%), Query Frame = 1
BLAST of Spo00988.1 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 3.600e-66 Identity = 119/206 (57.77%), Postives = 156/206 (75.73%), Query Frame = 1
BLAST of Spo00988.1 vs. ExPASy Swiss-Prot
Match: GSTF8_ARATH (Glutathione S-transferase F8, chloroplastic OS=Arabidopsis thaliana GN=GSTF8 PE=1 SV=3) HSP 1 Score: 250.4 bits (638), Expect = 1.800e-65 Identity = 125/212 (58.96%), Postives = 155/212 (73.11%), Query Frame = 1
BLAST of Spo00988.1 vs. TAIR (Arabidopsis)
Match: AT2G47730.1 (glutathione S-transferase phi 8) HSP 1 Score: 250.4 bits (638), Expect = 1.000e-66 Identity = 125/212 (58.96%), Postives = 155/212 (73.11%), Query Frame = 1
BLAST of Spo00988.1 vs. TAIR (Arabidopsis)
Match: AT4G02520.1 (glutathione S-transferase PHI 2) HSP 1 Score: 246.1 bits (627), Expect = 1.900e-65 Identity = 125/209 (59.81%), Postives = 154/209 (73.68%), Query Frame = 1
BLAST of Spo00988.1 vs. TAIR (Arabidopsis)
Match: AT2G02930.1 (glutathione S-transferase F3) HSP 1 Score: 243.0 bits (619), Expect = 1.600e-64 Identity = 125/210 (59.52%), Postives = 153/210 (72.86%), Query Frame = 1
BLAST of Spo00988.1 vs. TAIR (Arabidopsis)
Match: AT1G02920.1 (glutathione S-transferase 7) HSP 1 Score: 235.3 bits (599), Expect = 3.400e-62 Identity = 116/207 (56.04%), Postives = 146/207 (70.53%), Query Frame = 1
BLAST of Spo00988.1 vs. TAIR (Arabidopsis)
Match: AT1G02930.1 (glutathione S-transferase 6) HSP 1 Score: 233.0 bits (593), Expect = 1.700e-61 Identity = 116/207 (56.04%), Postives = 147/207 (71.01%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00988.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00988.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00988.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo00988.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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