Spo01057 (gene)

Overview
NameSpo01057
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 59824482 .. 59825337 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCCTTATTGGGATTCTCACTGTTGGTGTATTCCAAGATCTGCAACAACACACACACAACAACAAAACCAGGAAATTATAATTTTCTCACACACCAACGCATACATTCACTCTCTCTTCATCTTTCTCTCTCCTCCCCCCACCCACCTTTTCCCTTCCTTCTTCGCCTCCCCATTGGCGGATACCTTCTTTCTCCCATCTGTCTTTTTTCTACTCATTTCTCTTAAAAGTGAGTGAGAGAAAATAGCTTTAAAGTAGCGTTTCTGCTGCTTGGTTTTTGTTTTTGTGGGTATTCTTGCATTTTTCTGGGAAGATATACGAAACCCCAAATTAGGGCTCCTCCTATTTTACCCCCTTTCGATGTTTCTTGCATTTCTAGAGGTATCTCCTCTCTCTACTATTCACTATTTTTTAGGGTTTTTCTTGTATCCTTGATTTGAAGTATATTTGTTAATTTATTTTTTTGAATTTTCTACTTTATTGAGCTTGATTTTCTTTCTTCCCTTTGATTTCCACGTTGAGCTAGTTCTAGGTTTTTCTGGGAATTTGAATCTTCACTGGGTTTTGATTTTTCCTTTCTTGCTCTTTCCTCATTTATGCGGGTTTTTTTTCCAGCTTTTTTATTCTTTTGATTTATTTTAGCAAGCTGGAGCTGTTTTGTATGTAATTAGATTATGATAATTAATTTTTGTGCTGTAATTGTGTTTTCTTTAGCTTAAGTTTAATCTTTATGTAATTAGATGAGAATATTTGAGTTTTTAGCTGAATTTTATGTGCATTTTTTGAGCTTTTGTTGTTTCTGATTTTTAAGTGCTTTTTGTTAGGTGTAGCCTTCACGCAATGTGACATTTGA

mRNA sequence

ATGCTGCCTTATTGGGATTCTCACTTGAGAGAAAATAGCTTTAAAGTAGCGTTTCTGCTGCTTGGTTTTTGTTTTTGTGGGTATTCTTGCATTTTTCTGGGAAGATATACGAAACCCCAAATTAGGGCTCCTCCTATTTTACCCCCTTTCGATGTTTCTTGCATTTCTAGAGGTGTAGCCTTCACGCAATGTGACATTTGA

Coding sequence (CDS)

ATGCTGCCTTATTGGGATTCTCACTTGAGAGAAAATAGCTTTAAAGTAGCGTTTCTGCTGCTTGGTTTTTGTTTTTGTGGGTATTCTTGCATTTTTCTGGGAAGATATACGAAACCCCAAATTAGGGCTCCTCCTATTTTACCCCCTTTCGATGTTTCTTGCATTTCTAGAGGTGTAGCCTTCACGCAATGTGACATTTGA

Protein sequence

MLPYWDSHLRENSFKVAFLLLGFCFCGYSCIFLGRYTKPQIRAPPILPPFDVSCISRGVAFTQCDI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01057.1Spo01057.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo01057.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01057.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01057.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01057.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo087130.77Barchart | Table
Spo240460.74Barchart | Table
Spo033620.72Barchart | Table
Spo251070.72Barchart | Table
Spo200500.71Barchart | Table
Spo115580.71Barchart | Table
Spo095540.71Barchart | Table
Spo235490.70Barchart | Table
Spo266100.70Barchart | Table
Spo084070.70Barchart | Table
Spo051250.70Barchart | Table
Spo270810.69Barchart | Table
Spo062930.69Barchart | Table
Spo147230.69Barchart | Table
Spo220040.69Barchart | Table
Spo227940.69Barchart | Table
Spo053070.68Barchart | Table
Spo149140.68Barchart | Table
Spo176100.68Barchart | Table
Spo233320.68Barchart | Table
Spo228110.68Barchart | Table
Spo016280.68Barchart | Table
Spo142250.68Barchart | Table
Spo108350.68Barchart | Table
Spo212150.68Barchart | Table
Spo063620.67Barchart | Table
Spo112850.67Barchart | Table
Spo146300.67Barchart | Table
Spo153170.67Barchart | Table
Spo162400.67Barchart | Table
Spo214960.67Barchart | Table
Spo006770.67Barchart | Table
Spo028900.67Barchart | Table
Spo021060.67Barchart | Table
Spo089350.67Barchart | Table
Spo259870.66Barchart | Table
Spo147120.66Barchart | Table
Spo088500.66Barchart | Table
Spo140870.66Barchart | Table
Spo259850.66Barchart | Table
Spo059150.66Barchart | Table
Spo233270.66Barchart | Table
Spo100920.66Barchart | Table
Spo033100.66Barchart | Table
Spo065060.66Barchart | Table
Spo244250.66Barchart | Table
Spo152220.66Barchart | Table
Spo178600.66Barchart | Table
Spo154610.65Barchart | Table
Spo211550.65Barchart | Table
Spo198700.65Barchart | Table