Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAAAAGCAAGATATCTGTTACTCAAAATTAAAGGCTCTGAATTTTTTTTGTAAAAAATCAGAAGTTTGAGTTTTCAACAAAAATAAAAATGGAGTTAGCCTCACCACCTTGCTCAAATTTTCCTTCAAAAATCAGAATCAAAAGCTGCAATTTCTCTTCTTCATTGCTTATAAGCTCTGTATGTTCTCTTGATCCAATCTATGTCTTTCAATTATTTTTCTTTTTTTTAATTGAGAATGTACTTTTCTTTCCTGGGAATTTGTGGTTCAAATTTATATTACTAACAACAAAAGGTTTGGTTATCTTTTGTTAGTTTGATATGGTAGATTGATCATTTCTTCAATAATAGGCTATTATATTCTAAGGCTGTTCTGCTAGATTATAGGCCACTTTCTAAATTTAGTAAGGAGCTTCCCATACCCCTGATGATGCACTTTGATACTGAGATGGTTATGGTAAAAGCAACTCAATTATCTTTTGAGTTTATAGTATAGAAATGAAGCACTTAACTAAATTTGAATCTGAGTTTATAGTATATTGCATACAAAGTTTGTGTCAGTTTCTTGACTGTGATGCTTCAGTTGGCTTACAGAAAAGATGCAGTTTGTTATCAAAAAAAAAAATTAACATCTTGCATACAAAAGAGGACAACATGTATGGTGGTGTGTTGCAGCCAATTAAAGGTAGAAGATGACATAGATAATGCAGAAGCTTGTGAGTTAGTGAATGGAGCTGAGGTTGAAATAGGAGGAGATGACAATGATACAATCCATGCATCTCTCTTCCAGGCAGTCAAGAACAACAATGGAATTGGCATTCTACTCTTGTCTGACATTTTCGGGTTTGAGGATTCATACACCAGAGATTTTGCTTATCGCGTTGCCTGCAATGGTTACAAGTATGTACATCCATCTCCTTCTTGTGGTGTGAGGTTGTAGACTTGTACTGTCACAACTGTCTTAACTGTTGTGGTTATGAACTAAGTTAGGGGGTGTTTGGTTCGCACATTGGTATGGGGTTGAAATCTAGAATGATACCTAGGTGGTATGAGTTTGAAACTTGATTCTCAATACCATGTGTTTGGTTCAGTTTAGAGATGAGGTTTTTCCTTTTATTTGATACTTGAAGTAAAGATATGAGTCAAACCACCTCCCCCAGGTTTCTAAACCCAGTACCTGGGGGTTTTGAGGTATGGGTTGTAAACTCTTAAGGGGATTTTTGGTTCGTGAACTCTAGGTATGAAATATGGGTTTAAAATAGTCTAAATCCATATCATTTGTTTGGTTTGTACTTTTAAAAGTTTCAAACCCATACCTCAAACCCTCAAGGTATCGGATTTAGAAACCTTAGGAGGGATGTTAGTTTGGTTCATACCTTTATCATAGGTATCAAATAAAATAAAATAAACTCATTCTCCATATGAACCAAACGCATGTTATTAAGAATCAAGTTCCAAACTCATACCATCGTGATATCATTCCTAATTCCAACCTCATACCATCGTGATATTATTCCTGATTTCAACCTCATACCATCTTGATATCATTCCTGATTTCAACCCCAAACCACTGTGCGAACCAAACACCCCCTAAATTCTCCAACCAAACACATGGTATGAGTTTAGACCACTCTAAACCCATACCTCATATTTAGAATCTGCGAACCAAACACCCCCTTAACAAGTTTCAGGATACCATCTAAAATGTCATAATATGTTTGAAACTGCAGTGTATTAGTACCAGATTTGTTCCGAGGAGATCCATGGTCAAAAGACCAATCACAAGCTCAATTAGAGGAATGGCTAGCCAAACATGATCCAATTACGATGGCAAAAGACATTGAAATGTCAACCAAATGGATGGTGGATGAGTTCATGGCTTCTGAATCATCTAAAAAGCTTGGCATAATAGGATTCTGTTACGGAGGTGGTCGAGTACTGGAAGTGCTAGCCAAAGACCAGGGTTCTGTTTTCGGTACTGGTGTTTCTTTCTATGGAACACGAATGGATTTATCTACAGCTTCAAATGTTAAGGTTCCTGTTCTGTTTGTAACAGGGGATAAGGACCCTCTTTGTCAAGTTACTGTCCTTAATGAGTTAGGGAACATAATTGGGAACAACTCAAAGGTGGTAGTTTTCAAAGGTCAGGGACATGGTTTTGTTCATCGCCCTGAATCTCTTGAACAAGATGAAGATGCAGAAGAAGCTTTCATGATTATGAGAAATTGGCTACAAAATCAGTTGTTAGACTTGGCCTGAGTTGCCTATTACTGAATCGGTCTGTAAGTATCAATCAAGGCACAAGCATTAATGATGTACGTTTGGTGGGGCGTAAAACATTTCCATTGTAAAATAATTTTCATGGAAAACACAATTCCAAAATTAGTTTTCCGTTGTTTGATTTCATGTAAGAAAAATGATGAAACGGAAGGAAATGAGAGGGAAAGTAAGCAGGCAGTGAAAGGAGTGTACAAGAAAGATAAGAAAAGGAAGGAAAACAGTTATCCCTTCATTTTGATGGGGAAATGGTTTTCCATCATTGGGAGAGCAATTTTACACCTAAGGAAATTGATTTTACACTCCTTGCAAACCAAACAATGTAAAATTGAAAATAAAGAAAAACTGTTTTCCAAGAAAAGGTTTTACGCCCTACCAAATGGAGCCTTAAAACTCCATGAGAATGAAAAGGTTGTGTCATCCAGAAAGATTCCACTCCAAGAGCTGAGCACATTAGCTATAGAATTTTATTTTTCTTTCTTTTCATTTTTCATTCTCCTGATTGATGAAACTACCAATCATAGTAACATTACAAGACAAAAAAGAATTGTTTCATCAGAAATTTGCGGTACATTGGGGTAAATGACCCGGCAAAACAATTTTTTGGTATTACAGTAGGATAAGAGTCATGTAAAGTGAACTGAAGTAACAAGCCCTTCTCACTGGTTCCTCAGCCCTGTGTAATGTAGTTCAACTCAAAAGTCACTCCTGCACATCCTGAAAAAAGAAGAATGTTGTTAAACATGTTATCATGTAAAAGATTCACAAACTCAGAATTCAAAACAATTCGGTTTGATGTCTACAAAGGTAAGTAAAAGCAGTTCTGACTTCTGAGTAATGATATGAGAAGGATACGTGTTAAGAGAGGTAGCCTAGCTGCATCGAACAAGGACACTAAATTAAACTTGTAGCAAGCAAATGCCAAAACAAAATGAACAAAATCGATCAAAGACTTAACGAATTCCTAATATGACTTGTTTCTTAACAGTACTATATTACTATACAATTTAGGTTTTTAAATAGAGAAGTAACAAACTACAACAAACAACAAAATAAACACATAATGAAGCAGATGTGGTGATTGGAAAGCTGCATCACCTAAAAAGTCGACTTCAGAAGCAGTAAGGTGACTAGTGAATCATGCACCAAGGATTCTATCTTTCAGATATGAAACGCATAAACTTTGGGAGTCTCACACGTAGACAACTTAAGTATTCTCTACCAGTCTACCTCACCCTTAACTGATCAATTAATTGAAACCAAAATTAGCACATACCAAGGTACCAATGAAAAGAAGGAAAGTTTCAACTAGTGAGAGCTCTTCTATAAGCAATGACACCTGCATACTGTCATGTGACCATTGTCCGGGGGATAAACAAATCCATCATGAAAAACAGCTATGCCTAAATTGCTCCCAGTTTGCATGTTAATACAACTCCCCACATTAATGATCTCAAAAACACATCGTAGCGCACCCA ATAAAAAGCAAGATATCTGTTACTCAAAATTAAAGGCTCTGAATTTTTTTTGTAAAAAATCAGAAGTTTGAGTTTTCAACAAAAATAAAAATGGAGTTAGCCTCACCACCTTGCTCAAATTTTCCTTCAAAAATCAGAATCAAAAGCTGCAATTTCTCTTCTTCATTGCTTATAAGCTCTTTGGCTTACAGAAAAGATGCAGTTTGTTATCAAAAAAAAAAATTAACATCTTGCATACAAAAGAGGACAACATGTATGGTGGTGTGTTGCAGCCAATTAAAGGTAGAAGATGACATAGATAATGCAGAAGCTTGTGAGTTAGTGAATGGAGCTGAGGTTGAAATAGGAGGAGATGACAATGATACAATCCATGCATCTCTCTTCCAGGCAGTCAAGAACAACAATGGAATTGGCATTCTACTCTTGTCTGACATTTTCGGGTTTGAGGATTCATACACCAGAGATTTTGCTTATCGCGTTGCCTGCAATGGTTACAATGTATTAGTACCAGATTTGTTCCGAGGAGATCCATGGTCAAAAGACCAATCACAAGCTCAATTAGAGGAATGGCTAGCCAAACATGATCCAATTACGATGGCAAAAGACATTGAAATGTCAACCAAATGGATGGTGGATGAGTTCATGGCTTCTGAATCATCTAAAAAGCTTGGCATAATAGGATTCTGTTACGGAGGTGGTCGAGTACTGGAAGTGCTAGCCAAAGACCAGGGTTCTGTTTTCGGTACTGGTGTTTCTTTCTATGGAACACGAATGGATTTATCTACAGCTTCAAATGTTAAGGTTCCTGTTCTGTTTGTAACAGGGGATAAGGACCCTCTTTGTCAAGTTACTGTCCTTAATGAGTTAGGGAACATAATTGGGAACAACTCAAAGGTGGTAGTTTTCAAAGGTCAGGGACATGGTTTTGTTCATCGCCCTGAATCTCTTGAACAAGATGAAGATGCAGAAGAAGCTTTCATGATTATGAGAAATTGGCTACAAAATCAGTTGTTAGACTTGGCCTGAGTTGCCTATTACTGAATCGGTCTGTAAGTATCAATCAAGGCACAAGCATTAATGATGTACGTTTGGTGGGGCGTAAAACATTTCCATTGTAAAATAATTTTCATGGAAAACACAATTCCAAAATTAGTTTTCCGTTGTTTGATTTCATGTAAGAAAAATGATGAAACGGAAGGAAATGAGAGGGAAAGTAAGCAGGCAGTGAAAGGAGTGTACAAGAAAGATAAGAAAAGGAAGGAAAACAGTTATCCCTTCATTTTGATGGGGAAATGGTTTTCCATCATTGGGAGAGCAATTTTACACCTAAGGAAATTGATTTTACACTCCTTGCAAACCAAACAATGTAAAATTGAAAATAAAGAAAAACTGTTTTCCAAGAAAAGGTTTTACGCCCTACCAAATGGAGCCTTAAAACTCCATGAGAATGAAAAGGTTGTGTCATCCAGAAAGATTCCACTCCAAGAGCTGAGCACATTAGCTATAGAATTTTATTTTTCTTTCTTTTCATTTTTCATTCTCCTGATTGATGAAACTACCAATCATAGTAACATTACAAGACAAAAAAGAATTGTTTCATCAGAAATTTGCGGTACATTGGGGTAAATGACCCGGCAAAACAATTTTTTGGTATTACAGTAGGATAAGAGTCATGTAAAGTGAACTGAAGTAACAAGCCCTTCTCACTGGTTCCTCAGCCCTGTGTAATGTAGTTCAACTCAAAAGTCACTCCTGCACATCCTGAAAAAAGAAGAATGTTGTTAAACATGTTATCATGTAAAAGATTCACAAACTCAGAATTCAAAACAATTCGGTTTGATGTCTACAAAGGTAAGTAAAAGCAGTTCTGACTTCTGAGTAATGATATGAGAAGGATACGTGTTAAGAGAGGTAGCCTAGCTGCATCGAACAAGGACACTAAATTAAACTTGTAGCAAGCAAATGCCAAAACAAAATGAACAAAATCGATCAAAGACTTAACGAATTCCTAATATGACTTGTTTCTTAACAGTACTATATTACTATACAATTTAGGTTTTTAAATAGAGAAGTAACAAACTACAACAAACAACAAAATAAACACATAATGAAGCAGATGTGGTGATTGGAAAGCTGCATCACCTAAAAAGTCGACTTCAGAAGCAGTAAGGTGACTAGTGAATCATGCACCAAGGATTCTATCTTTCAGATATGAAACGCATAAACTTTGGGAGTCTCACACGTAGACAACTTAAGTATTCTCTACCAGTCTACCTCACCCTTAACTGATCAATTAATTGAAACCAAAATTAGCACATACCAAGGTACCAATGAAAAGAAGGAAAGTTTCAACTAGTGAGAGCTCTTCTATAAGCAATGACACCTGCATACTGTCATGTGACCATTGTCCGGGGGATAAACAAATCCATCATGAAAAACAGCTATGCCTAAATTGCTCCCAGTTTGCATGTTAATACAACTCCCCACATTAATGATCTCAAAAACACATCGTAGCGCACCCA ATGGAGTTAGCCTCACCACCTTGCTCAAATTTTCCTTCAAAAATCAGAATCAAAAGCTGCAATTTCTCTTCTTCATTGCTTATAAGCTCTTTGGCTTACAGAAAAGATGCAGTTTGTTATCAAAAAAAAAAATTAACATCTTGCATACAAAAGAGGACAACATGTATGGTGGTGTGTTGCAGCCAATTAAAGGTAGAAGATGACATAGATAATGCAGAAGCTTGTGAGTTAGTGAATGGAGCTGAGGTTGAAATAGGAGGAGATGACAATGATACAATCCATGCATCTCTCTTCCAGGCAGTCAAGAACAACAATGGAATTGGCATTCTACTCTTGTCTGACATTTTCGGGTTTGAGGATTCATACACCAGAGATTTTGCTTATCGCGTTGCCTGCAATGGTTACAATGTATTAGTACCAGATTTGTTCCGAGGAGATCCATGGTCAAAAGACCAATCACAAGCTCAATTAGAGGAATGGCTAGCCAAACATGATCCAATTACGATGGCAAAAGACATTGAAATGTCAACCAAATGGATGGTGGATGAGTTCATGGCTTCTGAATCATCTAAAAAGCTTGGCATAATAGGATTCTGTTACGGAGGTGGTCGAGTACTGGAAGTGCTAGCCAAAGACCAGGGTTCTGTTTTCGGTACTGGTGTTTCTTTCTATGGAACACGAATGGATTTATCTACAGCTTCAAATGTTAAGGTTCCTGTTCTGTTTGTAACAGGGGATAAGGACCCTCTTTGTCAAGTTACTGTCCTTAATGAGTTAGGGAACATAATTGGGAACAACTCAAAGGTGGTAGTTTTCAAAGGTCAGGGACATGGTTTTGTTCATCGCCCTGAATCTCTTGAACAAGATGAAGATGCAGAAGAAGCTTTCATGATTATGAGAAATTGGCTACAAAATCAGTTGTTAGACTTGGCCTGA MELASPPCSNFPSKIRIKSCNFSSSLLISSLAYRKDAVCYQKKKLTSCIQKRTTCMVVCCSQLKVEDDIDNAEACELVNGAEVEIGGDDNDTIHASLFQAVKNNNGIGILLLSDIFGFEDSYTRDFAYRVACNGYNVLVPDLFRGDPWSKDQSQAQLEEWLAKHDPITMAKDIEMSTKWMVDEFMASESSKKLGIIGFCYGGGRVLEVLAKDQGSVFGTGVSFYGTRMDLSTASNVKVPVLFVTGDKDPLCQVTVLNELGNIIGNNSKVVVFKGQGHGFVHRPESLEQDEDAEEAFMIMRNWLQNQLLDLA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo01105.1 vs. NCBI nr
Match: gi|902229262|gb|KNA21438.1| (hypothetical protein SOVF_043210 [Spinacia oleracea]) HSP 1 Score: 521.5 bits (1342), Expect = 9.800e-145 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1
BLAST of Spo01105.1 vs. NCBI nr
Match: gi|731311007|ref|XP_010685431.1| (PREDICTED: carboxymethylenebutenolidase homolog isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 412.1 bits (1058), Expect = 8.300e-112 Identity = 220/314 (70.06%), Postives = 249/314 (79.30%), Query Frame = 1
BLAST of Spo01105.1 vs. NCBI nr
Match: gi|731311005|ref|XP_010685360.1| (PREDICTED: carboxymethylenebutenolidase homolog isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 407.5 bits (1046), Expect = 2.100e-110 Identity = 214/302 (70.86%), Postives = 242/302 (80.13%), Query Frame = 1
BLAST of Spo01105.1 vs. NCBI nr
Match: gi|802716436|ref|XP_012085001.1| (PREDICTED: carboxymethylenebutenolidase homolog [Jatropha curcas]) HSP 1 Score: 352.8 bits (904), Expect = 6.000e-94 Identity = 183/286 (63.99%), Postives = 215/286 (75.17%), Query Frame = 1
BLAST of Spo01105.1 vs. NCBI nr
Match: gi|1000959462|ref|XP_015576379.1| (PREDICTED: carboxymethylenebutenolidase homolog [Ricinus communis]) HSP 1 Score: 351.3 bits (900), Expect = 1.700e-93 Identity = 169/251 (67.33%), Postives = 206/251 (82.07%), Query Frame = 1
BLAST of Spo01105.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPN6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_043210 PE=4 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 6.800e-145 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1
BLAST of Spo01105.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1Y9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g001800 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.400e-110 Identity = 214/302 (70.86%), Postives = 242/302 (80.13%), Query Frame = 1
BLAST of Spo01105.1 vs. UniProtKB/TrEMBL
Match: A0A067K582_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22194 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 4.200e-94 Identity = 183/286 (63.99%), Postives = 215/286 (75.17%), Query Frame = 1
BLAST of Spo01105.1 vs. UniProtKB/TrEMBL
Match: V4T3Z9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001943mg PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 2.700e-93 Identity = 180/309 (58.25%), Postives = 220/309 (71.20%), Query Frame = 1
BLAST of Spo01105.1 vs. UniProtKB/TrEMBL
Match: B9S718_RICCO (Hydrolase, putative OS=Ricinus communis GN=RCOM_1331480 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 3.500e-93 Identity = 176/276 (63.77%), Postives = 216/276 (78.26%), Query Frame = 1
BLAST of Spo01105.1 vs. ExPASy Swiss-Prot
Match: CMBL_HUMAN (Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.500e-20 Identity = 62/182 (34.07%), Postives = 94/182 (51.65%), Query Frame = 1
BLAST of Spo01105.1 vs. ExPASy Swiss-Prot
Match: CMBL_PONAB (Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.300e-19 Identity = 62/182 (34.07%), Postives = 94/182 (51.65%), Query Frame = 1
BLAST of Spo01105.1 vs. ExPASy Swiss-Prot
Match: CMBL_RAT (Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.700e-19 Identity = 68/210 (32.38%), Postives = 103/210 (49.05%), Query Frame = 1
BLAST of Spo01105.1 vs. ExPASy Swiss-Prot
Match: CMBL_MOUSE (Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.400e-18 Identity = 74/245 (30.20%), Postives = 114/245 (46.53%), Query Frame = 1
BLAST of Spo01105.1 vs. ExPASy Swiss-Prot
Match: E134_MAIZE (Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.600e-7 Identity = 32/100 (32.00%), Postives = 49/100 (49.00%), Query Frame = 1
BLAST of Spo01105.1 vs. TAIR (Arabidopsis)
Match: AT1G35420.2 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 319.7 bits (818), Expect = 2.000e-87 Identity = 158/277 (57.04%), Postives = 199/277 (71.84%), Query Frame = 1
BLAST of Spo01105.1 vs. TAIR (Arabidopsis)
Match: AT3G23600.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 73.9 bits (180), Expect = 1.900e-13 Identity = 54/203 (26.60%), Postives = 94/203 (46.31%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01105.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01105.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01105.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo01105.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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