Spo01129 (gene)

Overview
NameSpo01129
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPhotosystem II stability/assembly factor HCF136
Locationchr2 : 58686154 .. 58695128 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATTACGTGGTGAAAACAAAAAGAAGATTATTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAATTGGTTTACAGTCTTTATTAAAAGTTATTTAGCTTTTATAATAATGTTTTGAAAGAACGTTATCCAGACAAATCCTGAAATCCATAACCCCGCGAAACCGTTGATATGGAACAAGATAAGAGAGATAGATAGAGAACAACACAAACAAGCACTGACAACAATTCTAGCAATGGCGTCTTCAGCACCATTGCAATTTATCGAATGCTGCGCCAATTCCACCACCGTTACCACCAATAAAACCACCGTACTCTACCACTCTATCTCCTCTTCTTCCTCTAACCGCTGCCGTGTCACTCTCTCCCCTCTTACTCATAGACGCCGCTATTCTCCTCCCAGAGCTTGCTCTTCGCCGCAACCGCAACCACAACCGCGAAGGCAGTTCTTAGCTCAATCGGCTGCCGCTGCTGCGGCGGCGTTGTCTCTTTCGCCTTTTCTCTTTCCTCTTCCGGCAAAATCGGAGGACTCGCTTTCTGACTGGGAGAGAGTTTACCTTCCGATTGACCCCGGCGTGGTTCTACTAGATATTGGTTTTGTTCCTGAAGATCCTAATCATGGTACTCTCTTTGTCTTTTACAATTAGTTTTTTTTGTTTTCATTTGAATTACTATATACTTTTTGTTTTGCTCGAATTTTCATTTTATCGAATTTTCGTATAATAATATTAATATTGATAAGTAGTTATGTGTTTTATGGCTTGTCTCATTTTGATGAGTTTTATATTTATTTCTATTGTGATGTGATTTTTATAAATTGATAAAATTTGGACACCTTCAATAAAGACTGTTATTGTGAAAACTCAATAATTGGAAGTCTGAGATAAGAATTGTTTCAAGAATCGGTGATTCAAGGTATTGACCGGTTCGCTGATGTTTTTGAGCTCGGATGTACCTACGCACGAGTGAGTTAACTGGCCTCGAGGGTTTCGAGGAAACCCCCTCCGATGGCTAAGTCAGGCGATGAATTACTAGGTTTGAAGTGGCATATCAATGTGTATTCTCGAAGTATGTATTATATACAGTAATTTAATGGTCAAAGCCTAAAAGTAGTGCGTTAGAGACCGTGGAACCCCCCGATATGTATAAATATTTTGGAACAAAGGAAGTAAAGGTGCGTTCTATACTTCTATTCACCTGATTTTCACTCATCTAAACTTAATCGAACTGATGTGAACTTATAGAACTTACCAAATTTTATTTTAGTTGTAATTTGAACCTTAGAGGCCTTAATTTTTCTTAACTTGTCTTGTCTGTACTTATTTTTCCTTAAATGAGTGAAAATAAGGTGAACAAAACATGTCTCCAGTCCTACGTTGTATCATTTTCCCTTTACGCAGTTGAAATTGAAACTCTATATGAGAAATACAACTGATATTCTGAAATATGAAGAATGTTTGGTGCTTTCCAAGATCAAGTCTTTTACCAATAAAAAGAGTCTGTTGGAAATGCTGAAGAAATGTCTGGCTTGCAGGATTTCTGTTAGGGACAAGGCAAACTATTTTAGAGACAAAGGATGCGGGACAGACTTGGGTCCCGCGTTCTATACCATCAGCTGAAGAAGAGGATTTTAATTACAGATTCAACTCCATAAGCTTCAGAGGGAAGGAAGGTTGGATTGTTGGTAAGCCTGCAATTCTGTTGTACACTAATGATGCTGGGGAAAACTGGAAAAGGGTACCGCTGAGTTCTCAGCTTCCGGGTGATATGGTAAGTTTTTGTTGGTCAAAAGTCTGTGTGTGTTGCTAGTAGAAGATAAGAGTTAATAACTCATGACTGTCTCGCAAAATTTTTCATTTGCTTCTGGAGTTATTGATGATCTTGGAACTTTCAGCTGTATATGTTTTTCCAACTACGGAGTTAAGCATCATCTGTGAAACTAAACCTGTTCTTGAATATAAATTTTATTGAAGGTTCTTGGCCATCTAATGTTAGTATTTTTCAGTCAATGCTAGACCTTATCTTCCTGCTTCAAGTTTTCCATTCTCAATTCTCAGCATCGCTGTTTGCCTGGAAGTAATTTATTGACCATCACTTTGAAGAGCAGTTTTCTGAGGAATACTTAATATTTATGTTTCATTAGGTTTATCAATTTGAGTCAGCGATTCTGTTTTGTTTTGTAATTATGCTCAGATGATTTTTTTCCTTCTATTTTGTTTTGCCTATTGCTTTAAAGTTGTGTATCTTCTAATTTGCAATTGTAGGCTTCTTTTACCTTTTTAGTTCCTAAAGGGTAGTTTGTCTCTTTAGGTTTATATAAAGGCAACAGGAGAAAACAGTGCAGAGTTGGTGACTGACGAGGGAGCAATATACAATACTTCAAATGGTGGTTACAACTGGAAGGCTGCTGTACAGGAGAGTGTTTCGGCTACCCTTAACAGGTGACTTATTCTGAAAACATGTTTGTCTCGTATATATTATGTATATTGAAGTCTTTGACAGGATATATGTAAACTGTAAAGTAAGAAGAAATTTAAAGATAAGAGTTAGGATGTTATCCAGTTTGTTATGTCACTGTTTGCTGGCAGCTTAACTTTCAATGGTTTCTCGTATCATACTTGTTTCCAGCTGTTATACTCTCATTCTTGTGATGTCTCTTATATGAACTTCTTCCTTCTTTATCAATCCACTGTCTCCCTCAGATTACTTACCTGAATCAGAGAACCATGTTACAATAAAGTAGGAAACACTAGTAAGAGAACAAACGGGTAATATACGTCTGAAAAATGTAGAAACAATTTCGGCATTATGTCTTACAAATGATTTTTCTTGAGATGCCTCTTGCATGTACAAAAATGCAATGTTCATCCACTTACAGAGCTTCGTTGCTTTTGCAGAACAGTCTCAAGCGGTATTAGTGGTGCAAGTTACTACACTGGTACCTTTAATACTGTCAATCGTTCCCCAGATGGTAGATATGTTGCTGTTTCAAGCCGTGGAAACTTTTATCTGACTTGGGAACCTGGCCAGGTGTCATTCTTTTGCCTTCTTGCATCAATGTTTTTCAATAACTGAATACTTTAGTGAATGCATGTTCAAGTTAATGTTGCCTCTTTGTTCACAAATAGCTTAACGAAGCAAGCATAGGATCATGTTCACTGGGTACATTTACAAGAAACATCAGAGGTTTCTCGTGATTCATAGTTTAAACATTGTGTGAAGTTTTCAAATAAAACTGAATACCAAATAAGCAAGAAAAGAAGATAGGCGTATGTGTGTGTGTGTGTGTGTGAGGGGGGGGGGGGGGGGNGTTGATGGAGGGTTGAGAAGATTACGTTTAATGAAAGCAAGAAAAATGGATACAGGCTGATGTTCTTTAGGCAAATATTATTATGTAACAATCTTATTTTATCATTCTTTTAACAAAATTTCCTATATAATCGCCTTATCGGGTCACGAAGTGTGGTGAACTCTATTGATCTATGTATATGTCATGTTCAGGCTTACTGGCAGCCACATAACCGAACAATTGCAAGAAGAATTCAGAACATGGGTTGGAGAGCTGATGGTGGTCTTTGGCTGCTTGTACGTGGTGGTGGAATGTATTTAAGCAAAGGCTCTGGGGTCTGTGCTAATACCCTTTTATTTGCATGCAACTCCATTAATTTCTCTTATCGTGCAATCATCATACATTGTTTTCAAACCCTTTTCTTGGACCTTTAGAAAAGTGTTCACATCATTTAAGAAAATCATTGGAAATACCATTTCTCCGTTTCTCTTACTGTGTCACCGAATACTCACATTAGACTATTTTTGAATCTGAATTTTATTTCAAGTTCTCAGGTCTTACGTCAGTGTCTGTGTAAAGAATAATAAAATATAAAATTAGATAGTGCAGAGACAGAAGAGGGTGACTACACTTATCTTTTCATAAGCAAAAATTTTAGGGTAGTGAGCATGTTAACAGTTGACCTGCTGTTTAGTTGCCTGAAGTGTTACATCATACACTAGTTACTTATCTGATTTGATTTTAGCTTTAGTCTGCTTATGTTTTGCTGCTGCCTTCAATCCAATTTAATGCTAGTGTCATTCTGTAACACAGATGTCGGAGGACTTTGAGGAAGTGTCCGTACAAAGTCGTGGTTTTGGGATTCTTGACATTGGATATCGCTCACAGGTATTCTTTGATGAATTTCATGTGTTTTATGATTTGCAAAGGATAATGGGTAAATAAACCATCAAGTATTTTCTTTTGCTTTCTCCTTTATGGGTTAGCAACATTGGATTTGTGACCTCAGTGGAGGCGTGTAGTTGAGGCTGCAAGCACATGTTCTTATTCTACTGTGAAACTGGTGTTAATTTAGAAGACAATTGAACTGCTAATATCAAATTTCTGCTTCATCAAAGATTCTTGTTTAGAGATATGCATATTCCCTCTGTATAAGCACAACCAAGGTAGGAACTGAATAATCAAGCAGCATGCTCTTAGTTCTATCCTTCAAGACTCTATGTGCTCAACCCGAGAGGGACCTCTTATACACAGACGTCTCTAAGTCCGACCGTCATTGTTTTTGCTAGTATTTATTAATGAGTTAAGAGGTTCCAGTTAATGGCCCACTAATCTTGGCCAGTTTTTCTTCTTCATGACCGGAACTAAACTGATGTCCTAACTCCTACGGACCCTATTAATAAATATTAGATGAAAGTCCTTACTTAAATCATCTTAGATAATGGGAGATTTATGCTGGTAGGCACAATACCTTATGAGAATTTGATAAAGCTAGGACCACTTGGAGTCAGTGGAGATCTGGACACTGATTAATCCTTTGTAATTAGTTTCCGTTAACAGGAGTATGTCTTTGGCTTCAATCCGAGTCTATGCTGGGGAGTACTCATAATTGGCAGGCTTTCTTTTAAGACAATTTGATCCCAGATTATATCTTTAACTATCCATCCAACTCGGAATTCAATGAAACTATGTCCTTTTCGGAATGGTTTCTGTTTTATATCCGGCAATTTCAACGCCAGGATGGGAACCGCAGCCTGAGAATAGTGTACTTTATTAGTACACTTTGGGGCCTGTGGTTGACTAGGAATAACAGGGTATTTAGGGGAGAGATTTCGACAATTGCAATTGCTCAAGCGCTTATCAATAAGGGGATGAGTGAACATGGTTTTCTTCGGAATCAAAAACATCCATATTTAGGGTTTCTACATCCTCCTGAGGATTCTTTAGGTTTTCCACCAGGTTTTTTCAGGGCTATCATCTCGGGTACGGAAGACCAGGGTGCTCCAGCTATAATCTTGGTGGATGGTTCGTGGCATAAGATTACTGGGAATGCTGGAATGGGTTGGGTTCTAGATGGTCAGTATCTGCAGGAGGGGAGAATTCTGGGAGGAGCTCAGCCAGGCACTTCTCATTCGGCTTTGAAATCAGAGGCTAAAGCTTGTCTTCTAGGTTTACGGTGGGCGTCTCAGTCTTTGATAACAAGAGTTACAATTTTAACTGATTCACATCGGTTAGTTGAACTGTTGCGAGGGGATGCGATGTTAGATGTGCAAATCATGTGGACAGTTGCGGAAATCAAGAAAGTGGGGAAAACCTTTTCTTGGTGTTGTGTCAACAAGGTTGATCGTCAACAAGTGCAGCAGGCTCATGAGCTAGCAACTGCAGCGTCTACTTCTCTTTTGTGGTTTAATACTTTTGCGTAGTTTGTTTAGTTTGTTCTTTGAGCATATGTCAAAAAAAAAAAAAAAAAACTATCCATCCAACAGAAACTTTTCCCCAAACTCCTCTCTAGTTTGTTTCTTCCAAAAGTCTTCATCTTCAACAACAAAACAAATATGTAAATTTTCTCTACACAAGAATCACCTACAGGTCCTGGTTCGGTTTCATCTTTTCCTGGGGGATTAGATTGTCCGTGTGTTGGAGAGTGTACTTTGGGCTTGACTATTCCTCTAACACTTAAGACTGGGTTTCCTCTACTAATTAACATTTCCGATGGGATGAGAGATATATTTAAATTTAAGATGGTTCCTATAGAGAAATAAGCTTCACAGGTCCACTACGAAGGATTCAGTTCTTTTCCAGTCATCCTTGTCCAATTTTTGATAAGAAGATTTTCTTAAGCTGTCCTTGATTTCAATGTCTTGACCTATACCAGTGTTGAGGCCTAGTTTTCTTGCTCATGAGACCTTTGATGCAGTGAAGCAATCTCTAAGGAGGTGTTTTGGAATTTCATTTTCTTTCCCACATACTTCCCATAAGGGACCAATTTGCACCACTAACCTATAAAACTTACCCGTTTGTAAGAAGGTAATTCATTACGAATTCTCAAGGAGCTTCTGTTTTTACATGTCACTGGGCAATATTGTCTTCTAAATCGTGTCTCTGCTCCAGGGACAACCCATGGGCTATTATTTTGGATCATAAAGGTGTACCTAGATTTAACAGAGTAAATCCCCGTGGGAGACATCATCTATTTCCTTTGTTACTGTTAGGCTGTTCGTAAAGGTTGTGCATTAGAAGAGGAGGATTTGATACTCTTGCTCTCTTCGGTTTAAATTGACATGTTTATAAATAATTGGGTGGTCGACTTCGAGGCTGAAAGCCCTAATTGTATTTTCTGTTATCCTCCGAGTAGAGATGCTTTTTCTTCAAGGAAAAGGATCGGCTATCTTCCTACTTCACAAGAACAGAACCAACAGACATTTGAGGATTGAGGAGTCAGGTGGTAAGGTGGTCTAGTTTGTTTTTTTACAACATTAACCCAATGCCGAACACTGGGGGGGGGGGTTGGATGTATGTAGTCTGACTTTCCGGATAACTAAGAGTCTAAGAGGGTATTAGTCCGATAACTTGATGAGCAATGACTGCTAGCTATTTTCAATTAAGAAATTATGAAATGCGTTGACAGTTCAGTCATTCATTATCATTACCCCATTGCCTCAAAGAGGCTCCCGCAAGAAGCGGGGTAAGGGGGTGTCGGGTGTACGCAACCTTACCCCTGCAATTGCAGAGAGGTTGTTTCCAATTGACCCAAAAGCGATAACGGGACGACTACGAGACGACCATCTCCTACTTCATGGAAAGGAAGCGAAGAGGTTTTAAGAGCCATTTTGATTTAGTCCATTACATTCCACAACCAAAAGAACAAATGAATCTTTGGCTCCATCTGAAATTGACAGTTCAGTGAGCCATTTAATTTTCCATCATGATCAAAAGTTGTGATTACTTAGTGTTGTTAAAAATGTAGATTCCAGCTAACTTTGCAAAATCTTTCATCGCGATGATATTATAATGTTGTTCTATGATATCTTTACCAACAGTTACCTTGGAATTACTCTTTATTTTTGCAATTGAAAGGGTAGTATTCATTTATTTGCAAAGATAGCATGTACTTTGTGGTATGGTATTATCTCATTTCTCTATTGACATCTGGAACTCTTTTTCCAAAAGATCCTGTCTACTTGCTAGAGGGTAGTCTCTAATGTTTCAATGTTTCATGCTCTGCACACCTGTTTTAGTTGTTGCTTACTGTTGATGGTCTGAGTTTATCTGAAATGCAGGATGAAGCTTGGGCAGCTGGAGGAAGCGGGGTTCTATTGAGATCCAGCAATGGTGGTAAGAGCTGGGCTCGTGACAAAGCAGCTGACAATATAGCCGCAAATCTTTATTCTGTGAAGTAAGCTTACATTTCAATGATTGCTGTGGTTATTCATGAACTTATTTCTGTCTCCTCATATGCCACTTAAAGTCACATTGTACTTATCCCTTTCGTCCCTTCACACAGTTAACTTGTGTTTGTTTTGACTGTAATTTCCTAAATATCTAGTTGCTTCATGCATTATTTTGACTTTAATTTCCTAAATATCTTGTTGCTTCATGCATTTGAGAAGTAACCTTGTGGTTAATTTGCAGGTTTATTGATGACAAAACGGGGTTTGTGCTTGGAAACGATGGAGTTTTGCTTAGATACCTGGGATAGAGATGGTGTATACTCATGGTAAGCTAGTTACTCTTCATTTTGTTAATGTGAATCTTGCGTAGAGATATATTCTACTTTGCTAGTTAACTGGATGCTGTTATTTTGACAAAACCAAATGTAACATTTTTAGTGTTACGGGGCGACCTTGGAAGAAATGAAGTTTTACTAAAAAAAAAAATCCAAGCTAAATTACGAGCTGCATTCCTAAACCTCTTTGCCCTAGTTTACTAAGAATACAAAGATGATTATCAGTCTGCTATATATTAAATGTTTTGTGCAGCTTGCTGAGTTGCTGTAATGGAGCTTCTTCTAACTATAATGGTCATTTTTAACCGTATGCAGGTTCCTCAGTAATTCTGGTCGAGTTTTGTATCTGTTGTATGAGTATTCTTACAATTTTCCTTGTATCCAAGGAAAAACTGAGATGATTCTTTGATTGTCGATATATGATACTGTAATTAAAACAGGACATTTGATTTTGTACCAAGCTACTGTATACCAATCTTGTTGAAAAGCCACAATCTCCTTTTTTGCAAGGTATACCATCATTATTCAGGTTGATTAGCATGAACTGGTTTTGTAAATTCTCAAGAAATCTTCAAGGATCTTTATCTTGAGCCTAGGTTGGCAGATTGTTTTCCATTTTTCTGGCAATTTGTGACTTTTCAGTCTTTTCTTACAGTAAAGTGACACTATTTGGTGATTTAACGAGGAAAAAATAGGTGTTAGCAAGCTTTGATGTAACGGTGTCACAACTTGAGCAGAGGGCGGAGAGGCCCATATCTGAGATGTACGGATAAGACAAGCATTAAAACAAGTGCCATTTTTCAAAGAACAGATGCCATTTTGGAAAAATGAATGTCATTTTTCAAAAACAGATGCCATTTTACAAAAACGGATGTCATTTTTCAAAAAATTTGATTTTGTCATTTAGTGTTTGTCTTTAG

mRNA sequence

ATATTACGTGGTGAAAACAAAAAGAAGATTATTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAATTGGTTTACAGTCTTTATTAAAAGTTATTTAGCTTTTATAATAATGTTTTGAAAGAACGTTATCCAGACAAATCCTGAAATCCATAACCCCGCGAAACCGTTGATATGGAACAAGATAAGAGAGATAGATAGAGAACAACACAAACAAGCACTGACAACAATTCTAGCAATGGCGTCTTCAGCACCATTGCAATTTATCGAATGCTGCGCCAATTCCACCACCGTTACCACCAATAAAACCACCGTACTCTACCACTCTATCTCCTCTTCTTCCTCTAACCGCTGCCGTGTCACTCTCTCCCCTCTTACTCATAGACGCCGCTATTCTCCTCCCAGAGCTTGCTCTTCGCCGCAACCGCAACCACAACCGCGAAGGCAGTTCTTAGCTCAATCGGCTGCCGCTGCTGCGGCGGCGTTGTCTCTTTCGCCTTTTCTCTTTCCTCTTCCGGCAAAATCGGAGGACTCGCTTTCTGACTGGGAGAGAGTTTACCTTCCGATTGACCCCGGCGTGGTTCTACTAGATATTGGTTTTGTTCCTGAAGATCCTAATCATGGATTTCTGTTAGGGACAAGGCAAACTATTTTAGAGACAAAGGATGCGGGACAGACTTGGGTCCCGCGTTCTATACCATCAGCTGAAGAAGAGGATTTTAATTACAGATTCAACTCCATAAGCTTCAGAGGGAAGGAAGGTTGGATTGTTGGTAAGCCTGCAATTCTGTTGTACACTAATGATGCTGGGGAAAACTGGAAAAGGGTACCGCTGAGTTCTCAGCTTCCGGGTGATATGGTTTATATAAAGGCAACAGGAGAAAACAGTGCAGAGTTGGTGACTGACGAGGGAGCAATATACAATACTTCAAATGGTGGTTACAACTGGAAGGCTGCTGTACAGGAGAGTGTTTCGGCTACCCTTAACAGAACAGTCTCAAGCGGTATTAGTGGTGCAAGTTACTACACTGGTACCTTTAATACTGTCAATCGTTCCCCAGATGGTAGATATGTTGCTGTTTCAAGCCGTGGAAACTTTTATCTGACTTGGGAACCTGGCCAGGCTTACTGGCAGCCACATAACCGAACAATTGCAAGAAGAATTCAGAACATGGGTTGGAGAGCTGATGGTGGTCTTTGGCTGCTTGTACGTGGTGGTGGAATGTATTTAAGCAAAGGCTCTGGGATGTCGGAGGACTTTGAGGAAGTGTCCGTACAAAGTCGTGGTTTTGGGATTCTTGACATTGGATATCGCTCACAGGATGAAGCTTGGGCAGCTGGAGGAAGCGGGGTTCTATTGAGATCCAGCAATGGTGGTAAGAGCTGGGCTCGTGACAAAGCAGCTGACAATATAGCCGCAAATCTTTATTCTGTGAAGTTTATTGATGACAAAACGGGGTTTGTGCTTGGAAACGATGGAGTTTTGCTTAGATACCTGGGATAGAGATGGTGTATACTCATGGTAAGCTAGTTACTCTTCATTTTGTTAATGTGAATCTTGCGTAGAGATATATTCTACTTTGCTAGTTAACTGGATGCTGTTATTTTGACAAAACCAAATGTAACATTTTTAGTGTTACGGGGCGACCTTGGAAGAAATGAAGTTTTACTAAAAAAAAAAATCCAAGCTAAATTACGAGCTGCATTCCTAAACCTCTTTGCCCTAGTTTACTAAGAATACAAAGATGATTATCAGTCTGCTATATATTAAATGTTTTGTGCAGCTTGCTGAGTTGCTGTAATGGAGCTTCTTCTAACTATAATGGTCATTTTTAACCGTATGCAGGTTCCTCAGTAATTCTGGTCGAGTTTTGTATCTGTTGTATGAGTATTCTTACAATTTTCCTTGTATCCAAGGAAAAACTGAGATGATTCTTTGATTGTCGATATATGATACTGTAATTAAAACAGGACATTTGATTTTGTACCAAGCTACTGTATACCAATCTTGTTGAAAAGCCACAATCTCCTTTTTTGCAAGGTATACCATCATTATTCAGGTTGATTAGCATGAACTGGTTTTGTAAATTCTCAAGAAATCTTCAAGGATCTTTATCTTGAGCCTAGGTTGGCAGATTGTTTTCCATTTTTCTGGCAATTTGTGACTTTTCAGTCTTTTCTTACAGTAAAGTGACACTATTTGGTGATTTAACGAGGAAAAAATAGGTGTTAGCAAGCTTTGATGTAACGGTGTCACAACTTGAGCAGAGGGCGGAGAGGCCCATATCTGAGATGTACGGATAAGACAAGCATTAAAACAAGTGCCATTTTTCAAAGAACAGATGCCATTTTGGAAAAATGAATGTCATTTTTCAAAAACAGATGCCATTTTACAAAAACGGATGTCATTTTTCAAAAAATTTGATTTTGTCATTTAGTGTTTGTCTTTAG

Coding sequence (CDS)

ATGGCGTCTTCAGCACCATTGCAATTTATCGAATGCTGCGCCAATTCCACCACCGTTACCACCAATAAAACCACCGTACTCTACCACTCTATCTCCTCTTCTTCCTCTAACCGCTGCCGTGTCACTCTCTCCCCTCTTACTCATAGACGCCGCTATTCTCCTCCCAGAGCTTGCTCTTCGCCGCAACCGCAACCACAACCGCGAAGGCAGTTCTTAGCTCAATCGGCTGCCGCTGCTGCGGCGGCGTTGTCTCTTTCGCCTTTTCTCTTTCCTCTTCCGGCAAAATCGGAGGACTCGCTTTCTGACTGGGAGAGAGTTTACCTTCCGATTGACCCCGGCGTGGTTCTACTAGATATTGGTTTTGTTCCTGAAGATCCTAATCATGGATTTCTGTTAGGGACAAGGCAAACTATTTTAGAGACAAAGGATGCGGGACAGACTTGGGTCCCGCGTTCTATACCATCAGCTGAAGAAGAGGATTTTAATTACAGATTCAACTCCATAAGCTTCAGAGGGAAGGAAGGTTGGATTGTTGGTAAGCCTGCAATTCTGTTGTACACTAATGATGCTGGGGAAAACTGGAAAAGGGTACCGCTGAGTTCTCAGCTTCCGGGTGATATGGTTTATATAAAGGCAACAGGAGAAAACAGTGCAGAGTTGGTGACTGACGAGGGAGCAATATACAATACTTCAAATGGTGGTTACAACTGGAAGGCTGCTGTACAGGAGAGTGTTTCGGCTACCCTTAACAGAACAGTCTCAAGCGGTATTAGTGGTGCAAGTTACTACACTGGTACCTTTAATACTGTCAATCGTTCCCCAGATGGTAGATATGTTGCTGTTTCAAGCCGTGGAAACTTTTATCTGACTTGGGAACCTGGCCAGGCTTACTGGCAGCCACATAACCGAACAATTGCAAGAAGAATTCAGAACATGGGTTGGAGAGCTGATGGTGGTCTTTGGCTGCTTGTACGTGGTGGTGGAATGTATTTAAGCAAAGGCTCTGGGATGTCGGAGGACTTTGAGGAAGTGTCCGTACAAAGTCGTGGTTTTGGGATTCTTGACATTGGATATCGCTCACAGGATGAAGCTTGGGCAGCTGGAGGAAGCGGGGTTCTATTGAGATCCAGCAATGGTGGTAAGAGCTGGGCTCGTGACAAAGCAGCTGACAATATAGCCGCAAATCTTTATTCTGTGAAGTTTATTGATGACAAAACGGGGTTTGTGCTTGGAAACGATGGAGTTTTGCTTAGATACCTGGGATAG

Protein sequence

MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSSPQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYLG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01129.1Spo01129.1mRNA


Homology
[Close]
BLAST of Spo01129.1 vs. NCBI nr
Match: gi|902232592|gb|KNA22712.1| (hypothetical protein SOVF_031790 [Spinacia oleracea])

HSP 1 Score: 844.0 bits (2179), Expect = 1.200e-241
Identity = 420/421 (99.76%), Postives = 420/421 (99.76%), Query Frame = 1 

		  

Query: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60
           MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS
Sbjct: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60

Query: 61  PQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG 120
           PQPQPQPRRQFLAQSAAAAAAALSLSP LFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG
Sbjct: 61  PQPQPQPRRQFLAQSAAAAAAALSLSPSLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG 120

Query: 121 FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK 180
           FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK
Sbjct: 121 FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK 180

Query: 181 PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA 240
           PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA
Sbjct: 181 PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA 240

Query: 241 VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP 300
           VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP
Sbjct: 241 VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP 300

Query: 301 HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS 360
           HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS
Sbjct: 301 HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS 360

Query: 361 QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL 420
           QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL
Sbjct: 361 QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL 420

Query: 421 G 422
           G
Sbjct: 421 G 421
[Close]
BLAST of Spo01129.1 vs. NCBI nr
Match: gi|731354630|ref|XP_010688703.1| (PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 725.7 bits (1872), Expect = 4.600e-206
Identity = 366/426 (85.92%), Postives = 394/426 (92.49%), Query Frame = 1 

		  

Query: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60
           MASSAPLQF E    ST  T+  T +L+HS+SS +S R RV LSPLT +RRYSPP+ACSS
Sbjct: 1   MASSAPLQFSE----STAATS--THILFHSLSSPTSLRHRVNLSPLTQKRRYSPPKACSS 60

Query: 61  -----PQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVV 120
                PQPQPQPRRQFLA SAAAAAAA +LS  L PL AKSED+LS+WER+YLPID GVV
Sbjct: 61  SPQPQPQPQPQPRRQFLAHSAAAAAAAAALS--LSPLVAKSEDALSEWERIYLPIDAGVV 120

Query: 121 LLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEG 180
           LLDI FVP+DPNHGFLLGTRQTILETKD GQ+WVPRSI SAEEEDFNYRFNSISFRGKEG
Sbjct: 121 LLDISFVPDDPNHGFLLGTRQTILETKDGGQSWVPRSIASAEEEDFNYRFNSISFRGKEG 180

Query: 181 WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGY 240
           WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATG+NSAE+VTDEGAIY+TSNGGY
Sbjct: 181 WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGDNSAEMVTDEGAIYSTSNGGY 240

Query: 241 NWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ 300
           NWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDG+YVAVSSRGNF+LTWEPGQ
Sbjct: 241 NWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGKYVAVSSRGNFFLTWEPGQ 300

Query: 301 AYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILD 360
           AYWQPHNR+IARRIQNMGWRADGGLWLLVRGGG+YLSKGSG+SEDFEEV+VQSRGFGILD
Sbjct: 301 AYWQPHNRSIARRIQNMGWRADGGLWLLVRGGGLYLSKGSGISEDFEEVTVQSRGFGILD 360

Query: 361 IGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGV 420
           +GYRSQDEAWAAGGSG+LLR++NGGKSW RDKAADNIAANLYSVKFID+K GFVLGNDGV
Sbjct: 361 VGYRSQDEAWAAGGSGILLRTTNGGKSWTRDKAADNIAANLYSVKFIDEKIGFVLGNDGV 418

Query: 421 LLRYLG 422
           LLRYLG
Sbjct: 421 LLRYLG 418
[Close]
BLAST of Spo01129.1 vs. NCBI nr
Match: gi|449436353|ref|XP_004135957.1| (PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis sativus])

HSP 1 Score: 628.6 bits (1620), Expect = 7.700e-177
Identity = 308/374 (82.35%), Postives = 342/374 (91.44%), Query Frame = 1 

		  

Query: 55  PRACSSPQPQPQ------PRRQFLAQSAAAAAAALSLSPFLFPL-PAKSEDSLSDWERVY 114
           PR  SS  P+         RR F+A +AAA +  LSLSPF+ P+ PAKSE+SLS+WER+Y
Sbjct: 35  PRTLSSTTPKASLHNSSINRRHFVADTAAAVS--LSLSPFIAPVQPAKSEESLSEWERLY 94

Query: 115 LPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNS 174
           LPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G+TW PRSIPSAEEEDFNYRFNS
Sbjct: 95  LPIDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNS 154

Query: 175 ISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAI 234
           ISF+GKEGWIVGKPAILLYT+DAGE+W+R+PLS+QLPGDMVYIKATGE SAE+VTDEGAI
Sbjct: 155 ISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAI 214

Query: 235 YNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 294
           Y TSN GYNWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF
Sbjct: 215 YVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 274

Query: 295 YLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQ 354
           YLTWEPGQ +WQPHNR IARRIQNMGWRADGGLWLLVRGGG++LSKG+G+SE+FEEV VQ
Sbjct: 275 YLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQ 334

Query: 355 SRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTG 414
           SRGFGILD+GYRS++EAWAAGGSGVLL+++NGG+SW RDKAADNIAANLYSVKFI+DK G
Sbjct: 335 SRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKG 394

Query: 415 FVLGNDGVLLRYLG 422
           FVLGNDGVLL+YLG
Sbjct: 395 FVLGNDGVLLQYLG 406
[Close]
BLAST of Spo01129.1 vs. NCBI nr
Match: gi|659122869|ref|XP_008461367.1| (PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis melo])

HSP 1 Score: 627.1 bits (1616), Expect = 2.200e-176
Identity = 307/374 (82.09%), Postives = 342/374 (91.44%), Query Frame = 1 

		  

Query: 55  PRACSSPQPQPQ------PRRQFLAQSAAAAAAALSLSPFLFPL-PAKSEDSLSDWERVY 114
           PR  SS  P+         RRQF+A +  AAA +LSLSPF+ P+ PAKSE+SLS+WER+Y
Sbjct: 34  PRTISSTSPKASLHNSSINRRQFVADT--AAAVSLSLSPFIAPVQPAKSEESLSEWERLY 93

Query: 115 LPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNS 174
           LPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G+TW PRSIPSAEEEDFNYRFNS
Sbjct: 94  LPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNS 153

Query: 175 ISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAI 234
           ISF+GKEGWIVGKPAILLYT+DAGE+W+R+PLS+QLPGDMVYIKATGE SAE+VTDEGAI
Sbjct: 154 ISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAI 213

Query: 235 YNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 294
           Y TSN GYNWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNF
Sbjct: 214 YVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNF 273

Query: 295 YLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQ 354
           YLTWEPGQ +WQPHNR IARRIQNMGWRADGGLWLLVRGGG++LSKG+G+SE+FEEV VQ
Sbjct: 274 YLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQ 333

Query: 355 SRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTG 414
           SRGFGILD+GYRS++EAWAAGGSGVLL+++NGG+SW RDKAADNIAANLYSVKFI++K G
Sbjct: 334 SRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINEKKG 393

Query: 415 FVLGNDGVLLRYLG 422
           FVLGNDGVLL+YLG
Sbjct: 394 FVLGNDGVLLQYLG 405
[Close]
BLAST of Spo01129.1 vs. NCBI nr
Match: gi|703090427|ref|XP_010094078.1| (hypothetical protein L484_018094 [Morus notabilis])

HSP 1 Score: 623.6 bits (1607), Expect = 2.500e-175
Identity = 312/390 (80.00%), Postives = 344/390 (88.21%), Query Frame = 1 

		  

Query: 42  TLSPLTHRRRYSPPR--------ACSSPQPQPQPRRQFLAQSAAAAAAALSL-SPFLFPL 101
           T SP   R    PPR        + SS       RR+F+A++AA +   LSL SPFL P+
Sbjct: 29  TTSPRHFRSSQPPPRFIPKASSSSSSSSSSSLLCRRRFIAETAAVS---LSLASPFLGPV 88

Query: 102 -PAKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPR 161
            PAKSED+LS+WER YLPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G TWVPR
Sbjct: 89  QPAKSEDALSEWERCYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGNTWVPR 148

Query: 162 SIPSAEEEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIK 221
           SIPSAE+EDFNYRFNSISF GKEGWIVGKPAILLYT+DAGENW+R+ LS+QLPGDMVYIK
Sbjct: 149 SIPSAEDEDFNYRFNSISFIGKEGWIVGKPAILLYTSDAGENWERIALSAQLPGDMVYIK 208

Query: 222 ATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVN 281
           ATGE  AE+VTD+GAIY TSN GYNW+AAVQE+VSATLNRTVSSGISGASYYTGTFNTVN
Sbjct: 209 ATGEKGAEMVTDQGAIYVTSNKGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVN 268

Query: 282 RSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYL 341
           RSPDGRYVAVSSRGNFYLTWEPGQ +WQPHNR +ARRIQNMGWRADGGLWLLVRGGG++L
Sbjct: 269 RSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFL 328

Query: 342 SKGSGMSEDFEEVSVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADN 401
           SKG+G++EDFEEV+VQSRGFGILD+GYRSQ+EAWAAGGSG+LLR++NGGKSW RDKAADN
Sbjct: 329 SKGTGITEDFEEVAVQSRGFGILDVGYRSQEEAWAAGGSGILLRTTNGGKSWIRDKAADN 388

Query: 402 IAANLYSVKFIDDKTGFVLGNDGVLLRYLG 422
           IAANLYSVKFIDDK GFVLGNDGVLLRYLG
Sbjct: 389 IAANLYSVKFIDDKKGFVLGNDGVLLRYLG 415
[Close]
BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV67_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031790 PE=4 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 8.100e-242
Identity = 420/421 (99.76%), Postives = 420/421 (99.76%), Query Frame = 1 

		  

Query: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60
           MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS
Sbjct: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60

Query: 61  PQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG 120
           PQPQPQPRRQFLAQSAAAAAAALSLSP LFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG
Sbjct: 61  PQPQPQPRRQFLAQSAAAAAAALSLSPSLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG 120

Query: 121 FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK 180
           FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK
Sbjct: 121 FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK 180

Query: 181 PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA 240
           PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA
Sbjct: 181 PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA 240

Query: 241 VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP 300
           VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP
Sbjct: 241 VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP 300

Query: 301 HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS 360
           HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS
Sbjct: 301 HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS 360

Query: 361 QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL 420
           QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL
Sbjct: 361 QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL 420

Query: 421 G 422
           G
Sbjct: 421 G 421
[Close]
BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EI06_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g203050 PE=4 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 3.200e-206
Identity = 366/426 (85.92%), Postives = 394/426 (92.49%), Query Frame = 1 

		  

Query: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60
           MASSAPLQF E    ST  T+  T +L+HS+SS +S R RV LSPLT +RRYSPP+ACSS
Sbjct: 1   MASSAPLQFSE----STAATS--THILFHSLSSPTSLRHRVNLSPLTQKRRYSPPKACSS 60

Query: 61  -----PQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVV 120
                PQPQPQPRRQFLA SAAAAAAA +LS  L PL AKSED+LS+WER+YLPID GVV
Sbjct: 61  SPQPQPQPQPQPRRQFLAHSAAAAAAAAALS--LSPLVAKSEDALSEWERIYLPIDAGVV 120

Query: 121 LLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEG 180
           LLDI FVP+DPNHGFLLGTRQTILETKD GQ+WVPRSI SAEEEDFNYRFNSISFRGKEG
Sbjct: 121 LLDISFVPDDPNHGFLLGTRQTILETKDGGQSWVPRSIASAEEEDFNYRFNSISFRGKEG 180

Query: 181 WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGY 240
           WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATG+NSAE+VTDEGAIY+TSNGGY
Sbjct: 181 WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGDNSAEMVTDEGAIYSTSNGGY 240

Query: 241 NWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ 300
           NWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDG+YVAVSSRGNF+LTWEPGQ
Sbjct: 241 NWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGKYVAVSSRGNFFLTWEPGQ 300

Query: 301 AYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILD 360
           AYWQPHNR+IARRIQNMGWRADGGLWLLVRGGG+YLSKGSG+SEDFEEV+VQSRGFGILD
Sbjct: 301 AYWQPHNRSIARRIQNMGWRADGGLWLLVRGGGLYLSKGSGISEDFEEVTVQSRGFGILD 360

Query: 361 IGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGV 420
           +GYRSQDEAWAAGGSG+LLR++NGGKSW RDKAADNIAANLYSVKFID+K GFVLGNDGV
Sbjct: 361 VGYRSQDEAWAAGGSGILLRTTNGGKSWTRDKAADNIAANLYSVKFIDEKIGFVLGNDGV 418

Query: 421 LLRYLG 422
           LLRYLG
Sbjct: 421 LLRYLG 418
[Close]
BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: A0A0A0K5Y1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420730 PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 5.400e-177
Identity = 308/374 (82.35%), Postives = 342/374 (91.44%), Query Frame = 1 

		  

Query: 55  PRACSSPQPQPQ------PRRQFLAQSAAAAAAALSLSPFLFPL-PAKSEDSLSDWERVY 114
           PR  SS  P+         RR F+A +AAA +  LSLSPF+ P+ PAKSE+SLS+WER+Y
Sbjct: 35  PRTLSSTTPKASLHNSSINRRHFVADTAAAVS--LSLSPFIAPVQPAKSEESLSEWERLY 94

Query: 115 LPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNS 174
           LPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G+TW PRSIPSAEEEDFNYRFNS
Sbjct: 95  LPIDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNS 154

Query: 175 ISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAI 234
           ISF+GKEGWIVGKPAILLYT+DAGE+W+R+PLS+QLPGDMVYIKATGE SAE+VTDEGAI
Sbjct: 155 ISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAI 214

Query: 235 YNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 294
           Y TSN GYNWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF
Sbjct: 215 YVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 274

Query: 295 YLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQ 354
           YLTWEPGQ +WQPHNR IARRIQNMGWRADGGLWLLVRGGG++LSKG+G+SE+FEEV VQ
Sbjct: 275 YLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQ 334

Query: 355 SRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTG 414
           SRGFGILD+GYRS++EAWAAGGSGVLL+++NGG+SW RDKAADNIAANLYSVKFI+DK G
Sbjct: 335 SRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKG 394

Query: 415 FVLGNDGVLLRYLG 422
           FVLGNDGVLL+YLG
Sbjct: 395 FVLGNDGVLLQYLG 406
[Close]
BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: W9R3A0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018094 PE=4 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 1.700e-175
Identity = 312/390 (80.00%), Postives = 344/390 (88.21%), Query Frame = 1 

		  

Query: 42  TLSPLTHRRRYSPPR--------ACSSPQPQPQPRRQFLAQSAAAAAAALSL-SPFLFPL 101
           T SP   R    PPR        + SS       RR+F+A++AA +   LSL SPFL P+
Sbjct: 29  TTSPRHFRSSQPPPRFIPKASSSSSSSSSSSLLCRRRFIAETAAVS---LSLASPFLGPV 88

Query: 102 -PAKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPR 161
            PAKSED+LS+WER YLPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G TWVPR
Sbjct: 89  QPAKSEDALSEWERCYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGNTWVPR 148

Query: 162 SIPSAEEEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIK 221
           SIPSAE+EDFNYRFNSISF GKEGWIVGKPAILLYT+DAGENW+R+ LS+QLPGDMVYIK
Sbjct: 149 SIPSAEDEDFNYRFNSISFIGKEGWIVGKPAILLYTSDAGENWERIALSAQLPGDMVYIK 208

Query: 222 ATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVN 281
           ATGE  AE+VTD+GAIY TSN GYNW+AAVQE+VSATLNRTVSSGISGASYYTGTFNTVN
Sbjct: 209 ATGEKGAEMVTDQGAIYVTSNKGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVN 268

Query: 282 RSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYL 341
           RSPDGRYVAVSSRGNFYLTWEPGQ +WQPHNR +ARRIQNMGWRADGGLWLLVRGGG++L
Sbjct: 269 RSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFL 328

Query: 342 SKGSGMSEDFEEVSVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADN 401
           SKG+G++EDFEEV+VQSRGFGILD+GYRSQ+EAWAAGGSG+LLR++NGGKSW RDKAADN
Sbjct: 329 SKGTGITEDFEEVAVQSRGFGILDVGYRSQEEAWAAGGSGILLRTTNGGKSWIRDKAADN 388

Query: 402 IAANLYSVKFIDDKTGFVLGNDGVLLRYLG 422
           IAANLYSVKFIDDK GFVLGNDGVLLRYLG
Sbjct: 389 IAANLYSVKFIDDKKGFVLGNDGVLLRYLG 415
[Close]
BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: A0A061E463_THECC (Photosystem II stability/assembly factor, chloroplast (HCF136) isoform 1 OS=Theobroma cacao GN=TCM_007737 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 2.900e-175
Identity = 300/367 (81.74%), Postives = 334/367 (91.01%), Query Frame = 1 

		  

Query: 55  PRACSSPQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGV 114
           P   SS  P    RRQ ++Q+A+ + +  +LS     LPAKSE+ LS+WERVYLPIDPGV
Sbjct: 47  PHHSSSSSPTLVNRRQLISQTASLSLSVATLSAL--QLPAKSEEVLSEWERVYLPIDPGV 106

Query: 115 VLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKE 174
           VLLDI FVP+DPNHGFLLGTRQTILETKD G TWVPRSIPSAE+EDFNYRFNSISF+GKE
Sbjct: 107 VLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKE 166

Query: 175 GWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGG 234
           GWIVGKPAILLYT+DAGE+W+R+PLS+QLPGDMVYIKAT E SAE+VTD+GAIY TSN G
Sbjct: 167 GWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATDEKSAEMVTDQGAIYVTSNRG 226

Query: 235 YNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG 294
           +NW+AAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG
Sbjct: 227 FNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG 286

Query: 295 QAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGIL 354
           Q +WQPHNR +ARRIQNMGWRADGGLWLLVRGGG++LSKG+G++EDFEE+ VQSRGFGIL
Sbjct: 287 QPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEIPVQSRGFGIL 346

Query: 355 DIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDG 414
           D+GYRS +EAWAAGGSGVLLR++NGGKSW RDKAADNIAANLYSVKFIDDK GFVLGNDG
Sbjct: 347 DVGYRSMEEAWAAGGSGVLLRTTNGGKSWTRDKAADNIAANLYSVKFIDDKKGFVLGNDG 406

Query: 415 VLLRYLG 422
           VLLRYLG
Sbjct: 407 VLLRYLG 411
[Close]
BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: P2SAF_ARATH (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis thaliana GN=HCF136 PE=1 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 8.800e-173
Identity = 295/377 (78.25%), Postives = 333/377 (88.33%), Query Frame = 1 

		  

Query: 55  PRACSSPQPQPQP----------RRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWE 114
           P+A SSP P P P          RR+ L QSAA +   LSLS  + P  A++++ LS+WE
Sbjct: 32  PKASSSPPPSPSPSSSSSSLSFSRRELLYQSAAVS---LSLSSIVGP--ARADEQLSEWE 91

Query: 115 RVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYR 174
           RV+LPIDPGVVLLDI FVP++P+ GFLLGTRQT+LETKD G TW PRSIPSAEEEDFNYR
Sbjct: 92  RVFLPIDPGVVLLDIAFVPDEPSRGFLLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYR 151

Query: 175 FNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDE 234
           FNSISF+GKEGWI+GKPAILLYT DAGENW R+PLSSQLPGDMV+IKAT + SAE+VTDE
Sbjct: 152 FNSISFKGKEGWIIGKPAILLYTADAGENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDE 211

Query: 235 GAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSR 294
           GAIY TSN GYNWKAA+QE+VSATLNRTVSSGISGASYYTGTF+ VNRSPDGRYVAVSSR
Sbjct: 212 GAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSR 271

Query: 295 GNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEV 354
           GNF+LTWEPGQ YWQPHNR +ARRIQNMGWRADGGLWLLVRGGG+YLSKG+G++E+FEEV
Sbjct: 272 GNFFLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEV 331

Query: 355 SVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDD 414
            VQSRGFGILD+GYRS++EAWAAGGSG+LLR+ NGGKSW RDKAADNIAANLY+VKF+DD
Sbjct: 332 PVQSRGFGILDVGYRSEEEAWAAGGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDD 391

Query: 415 KTGFVLGNDGVLLRYLG 422
           K GFVLGNDGVLLRY+G
Sbjct: 392 KKGFVLGNDGVLLRYVG 403
[Close]
BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: P2SAF_ORYSJ (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa subsp. japonica GN=HCF136 PE=3 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 4.200e-167
Identity = 300/428 (70.09%), Postives = 342/428 (79.91%), Query Frame = 1 

		  

Query: 20  TTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSSPQPQPQPRRQFLAQSAAAA 79
           TT    +  H + SSS  RCR+ L P  H    S  R            R+F+A +A A+
Sbjct: 3   TTASLHLHLHLLLSSSRRRCRL-LVPRAHTDSISTGR------------RRFIADTATAS 62

Query: 80  AAALSLSPFLFPLP----AKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTR 139
           AAA ++ P + P      A    SLS+WERV LPIDPGVVLLDI FVP+DP+HGFLLGTR
Sbjct: 63  AAA-AVGPLVLPRTPLARADQPPSLSEWERVLLPIDPGVVLLDIAFVPDDPSHGFLLGTR 122

Query: 140 QTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWK 199
           QTILETK+ G TW PRSIPSAE+EDFNYRFNS+SF GKEGWI+GKPAILL+T+DAG++W+
Sbjct: 123 QTILETKNGGNTWFPRSIPSAEDEDFNYRFNSVSFMGKEGWIIGKPAILLHTSDAGDSWE 182

Query: 200 RVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSS 259
           R+PLS+QLPG+MVYIKATGE SAE+VTDEGAIY TSN GYNWKAAVQE+VSATLNRTVSS
Sbjct: 183 RIPLSAQLPGNMVYIKATGEQSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSS 242

Query: 260 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWR 319
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ +WQPHNR +ARRIQNMGWR
Sbjct: 243 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWR 302

Query: 320 ADGGLWLLVRGGGMYLSKGSG----------------------MSEDFEEVSVQSRGFGI 379
           ADGGLWLLVRGGG++LSKGSG                      ++EDFEE SVQSRGFGI
Sbjct: 303 ADGGLWLLVRGGGLFLSKGSGFQFFYRGLNDAHAISYLHPPNQITEDFEEASVQSRGFGI 362

Query: 380 LDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGND 422
           LD+GYRS+DEAWAAGGSGVLL+++NGGK+W RDKAADNIAANLYSVKF+ D  G+VLGND
Sbjct: 363 LDVGYRSKDEAWAAGGSGVLLKTTNGGKTWVRDKAADNIAANLYSVKFLGDNKGYVLGND 416
[Close]
BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: P2SAF_GUITH (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia theta GN=hcf136 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.100e-90
Identity = 158/336 (47.02%), Postives = 229/336 (68.15%), Query Frame = 1 

		  

Query: 93  PAKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRS 152
           P  +  + + W +V LP+D   VL DI F   +  HG+L+G++ T LET D G TWVPR+
Sbjct: 61  PKFTHANTTSWTKVDLPVDS--VLFDIEFTDPECKHGWLVGSKGTFLETDDGGNTWVPRT 120

Query: 153 IPSAE-EEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIK 212
             + + +E+  YRF +ISF G+EGW++GKPAI+LYT D G+ W RVP+S +LPG+   IK
Sbjct: 121 FANLDPDEELTYRFENISFEGQEGWVIGKPAIILYTKDGGKTWFRVPVSPKLPGEPCLIK 180

Query: 213 ATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVN 272
           A G  SAEL T  GAIY T+N G NWKA V+E++ +TLNRT+SSG+SGASY+TG    V 
Sbjct: 181 ALGSESAELTTTSGAIYVTNNAGRNWKAQVKETIDSTLNRTISSGVSGASYFTGNVINVI 240

Query: 273 RSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADG---GLWLLVRGGG 332
           R+ +G+Y+A+SSRGNFYLTWEPGQ +W P  R  +RRIQ+MG+  +    G+W+  RGGG
Sbjct: 241 RNSEGKYLAISSRGNFYLTWEPGQDFWIPRARETSRRIQSMGFIQNDNQKGIWMSTRGGG 300

Query: 333 MYLSK-----GSGMSEDFEEVSVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSW 392
           + +S       S  S +FE + +++ G+GILD  + +  + W   G G++  S++ GK+W
Sbjct: 301 LSVSTKNFDFESISSFNFENIDIKTGGYGILDAAFVNDKDIWIICGGGIVYNSTDKGKNW 360

Query: 393 ARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRY 420
            +    D ++ NLY +KF+++  GF+LG++G+LLRY
Sbjct: 361 TKVDGIDKLSGNLYKIKFVNNNKGFILGSNGLLLRY 394
[Close]
BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: YC48L_SYNY3 (Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr2034 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 5.500e-82
Identity = 152/322 (47.20%), Postives = 202/322 (62.73%), Query Frame = 1 

		  

Query: 99  SLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEE 158
           + + W+ + L  D      DI F  EDPNHG+L+GT++TI ET D G TW  + I   EE
Sbjct: 36  AFNPWQEIALETDS--TFADIAFT-EDPNHGWLVGTKETIFETTDGGDTWEQKLIDLGEE 95

Query: 159 EDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSA 218
           +     F+++SF G EGWI GKP+ILL+T D G+ W R+PLS +LPG    I A G  +A
Sbjct: 96  K---ASFSAVSFSGNEGWITGKPSILLHTTDGGQTWARIPLSEKLPGAPYSIIALGPQTA 155

Query: 219 ELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRY 278
           E++TD GAIY T+NGG NWKA V+ +V                   G   T+ RS DGRY
Sbjct: 156 EMITDLGAIYKTTNGGKNWKALVEGAV-------------------GVARTIQRSTDGRY 215

Query: 279 VAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMS 338
           VAVS+RGNFY TW PGQ  W PHNR  +RR+Q MG+  DG LWLL RGG +  S      
Sbjct: 216 VAVSARGNFYSTWAPGQTEWTPHNRNSSRRLQTMGYGKDGQLWLLARGGQLQFSTDPDAE 275

Query: 339 EDFEEVSVQSRG-FGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLY 398
           E  + ++ Q +G +G+LD+ +R+ +E W AG SG LL S +GG++WA+D   ++I ANLY
Sbjct: 276 EWSDVIAPQDKGSWGLLDLSFRTPEEVWVAGASGNLLMSQDGGQTWAKDTGVEDIPANLY 332

Query: 399 SVKFIDDKTGFVLGNDGVLLRY 420
            V F+  + GFVLG DG+LL+Y
Sbjct: 336 RVVFLSPEKGFVLGQDGILLKY 332
[Close]
BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: P2SAF_CYAPA (Photosystem II stability/assembly factor HCF136 OS=Cyanophora paradoxa GN=hcf136 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.000e-80
Identity = 150/323 (46.44%), Postives = 195/323 (60.37%), Query Frame = 1 

		  

Query: 103 WERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFN 162
           WE++  P++   +LLDIGFVP+ P  G+LLGTR T+ ET D G+TW  RS+     ED  
Sbjct: 33  WEQI--PLNTDEILLDIGFVPDQPQRGWLLGTRSTLFETTDKGKTWELRSL---NLEDDK 92

Query: 163 YRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVT 222
           YR NSISF GKEGW+ GKPAILL+T D G +W R+PLS+QLPGD   I A G   AEL T
Sbjct: 93  YRLNSISFSGKEGWVTGKPAILLHTTDGGSSWSRIPLSNQLPGDPALITALGTGKAELAT 152

Query: 223 DEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVS 282
           D GAIY T N G  WKA +QE +                   G   TV RS +G YVAVS
Sbjct: 153 DIGAIYRTENSGQTWKAQIQEPL-------------------GVIRTVARSENGSYVAVS 212

Query: 283 SRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFE 342
           ++GNFY TW+ G   W  H R  +RRIQ+MG+  +  LW+L RGG ++ S      E   
Sbjct: 213 AKGNFYSTWKEGDDKWISHPRQSSRRIQSMGFTNNNRLWMLTRGGQLWFSSNDSFDEPNW 272

Query: 343 EVSVQSR-----GFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLY 402
           E           G G+L++ +++  E W +GGSG+LL S + G +W ++ + DNI +N Y
Sbjct: 273 EGPKTPEGKVGFGLGLLNLAFKTPTEIWVSGGSGILLSSQDTGNTWKKETSTDNIPSNFY 331

Query: 403 SVKFIDDKTGFVLGNDGVLLRYL 421
            + FID + GFVLGN G LLRY+
Sbjct: 333 KISFIDKEVGFVLGNQGTLLRYV 331
[Close]
BLAST of Spo01129.1 vs. TAIR (Arabidopsis)
Match: AT5G23120.1 (photosystem II stability/assembly factor, chloroplast (HCF136))

HSP 1 Score: 607.8 bits (1566), Expect = 4.900e-174
Identity = 295/377 (78.25%), Postives = 333/377 (88.33%), Query Frame = 1 

		  

Query: 55  PRACSSPQPQPQP----------RRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWE 114
           P+A SSP P P P          RR+ L QSAA +   LSLS  + P  A++++ LS+WE
Sbjct: 32  PKASSSPPPSPSPSSSSSSLSFSRRELLYQSAAVS---LSLSSIVGP--ARADEQLSEWE 91

Query: 115 RVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYR 174
           RV+LPIDPGVVLLDI FVP++P+ GFLLGTRQT+LETKD G TW PRSIPSAEEEDFNYR
Sbjct: 92  RVFLPIDPGVVLLDIAFVPDEPSRGFLLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYR 151

Query: 175 FNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDE 234
           FNSISF+GKEGWI+GKPAILLYT DAGENW R+PLSSQLPGDMV+IKAT + SAE+VTDE
Sbjct: 152 FNSISFKGKEGWIIGKPAILLYTADAGENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDE 211

Query: 235 GAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSR 294
           GAIY TSN GYNWKAA+QE+VSATLNRTVSSGISGASYYTGTF+ VNRSPDGRYVAVSSR
Sbjct: 212 GAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSR 271

Query: 295 GNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEV 354
           GNF+LTWEPGQ YWQPHNR +ARRIQNMGWRADGGLWLLVRGGG+YLSKG+G++E+FEEV
Sbjct: 272 GNFFLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEV 331

Query: 355 SVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDD 414
            VQSRGFGILD+GYRS++EAWAAGGSG+LLR+ NGGKSW RDKAADNIAANLY+VKF+DD
Sbjct: 332 PVQSRGFGILDVGYRSEEEAWAAGGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDD 391

Query: 415 KTGFVLGNDGVLLRYLG 422
           K GFVLGNDGVLLRY+G
Sbjct: 392 KKGFVLGNDGVLLRYVG 403
The following BLAST results are available for this feature:
BLAST of Spo01129.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902232592|gb|KNA22712.1|1.2e-24199.7hypothetical protein SOVF_0317... [more]
gi|731354630|ref|XP_010688703.1|4.6e-20685.9PREDICTED: photosystem II stab... [more]
gi|449436353|ref|XP_004135957.1|7.7e-17782.3PREDICTED: photosystem II stab... [more]
gi|659122869|ref|XP_008461367.1|2.2e-17682.0PREDICTED: photosystem II stab... [more]
gi|703090427|ref|XP_010094078.1|2.5e-17580.0hypothetical protein L484_0180... [more]
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BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RV67_SPIOL8.1e-24299.7Uncharacterized protein OS=Spi... [more]
A0A0J8EI06_BETVU3.2e-20685.9Uncharacterized protein OS=Bet... [more]
A0A0A0K5Y1_CUCSA5.4e-17782.3Uncharacterized protein OS=Cuc... [more]
W9R3A0_9ROSA1.7e-17580.0Uncharacterized protein OS=Mor... [more]
A0A061E463_THECC2.9e-17581.7Photosystem II stability/assem... [more]
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BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
P2SAF_ARATH8.8e-17378.2Photosystem II stability/assem... [more]
P2SAF_ORYSJ4.2e-16770.0Photosystem II stability/assem... [more]
P2SAF_GUITH1.1e-9047.0Photosystem II stability/assem... [more]
YC48L_SYNY35.5e-8247.2Ycf48-like protein OS=Synechoc... [more]
P2SAF_CYAPA3.0e-8046.4Photosystem II stability/assem... [more]
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BLAST of Spo01129.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G23120.14.9e-17478.2photosystem II stability/assem... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019546Twin-arginine translocation pathway, signal sequence, bacterial/archaealTIGRFAMsTIGR01409TIGR01409coord: 68..94
score: 0.
IPR028203Photosynthesis system II assembly factor Ycf48/Hcf136-like domainPFAMPF14870PSII_BNRcoord: 99..419
score: 2.3E
NoneNo IPR availableGENE3D2.130.10.140coord: 95..415
score: 2.0
NoneNo IPR availablePANTHERPTHR32010FAMILY NOT NAMEDcoord: 26..421
score: 4.7E
NoneNo IPR availablePANTHERPTHR32010:SF6PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTICcoord: 26..421
score: 4.7E
NoneNo IPR availableunknownSSF110296Oligoxyloglucan reducing end-specific cellobiohydrolasecoord: 103..420
score: 1.03

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0010114 response to red light
biological_process GO:0010218 response to far red light
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009637 response to blue light
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0042793 plastid transcription
biological_process GO:0010207 photosystem II assembly
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009902 chloroplast relocation
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009533 chloroplast stromal thylakoid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0031977 thylakoid lumen
RNA-Seq Expression