Spo01153 (gene) | SpinachBase

Overview


Name	Spo01153
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Plant/F21F14-40 protein
Location	chr2 : 57993988 .. 57997076 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATAAGAATATGTGTCGACATTGGTTGCCCTTTCATTTCCTTATCTCCTCGTCTCTTTCTCTCTCTCCTCTTTCTGCCAAAATACAGAGAGAGCGAGCATGGCTGCCACACTCTCAGCCTTGAAACTCCCCTCTCTCCCTCTCCGCATTCAATCCAAACTCCACTCTCCCTCCACCATTACTCAAACACCAACACCCCCTCAATCTAACCCTAATCTTAAATTAACCCTTTTCAATCAACAAGATTTCCTACACACATTCAAATCCTCCGCTCTCCCTCTCTCCACTCTCGCATTACCCTTCCTTCTAGATGCCCAGGTAATTCAATTTTCGATTGATCATTTCATCTTTTTAAAATCATGAAATTAATATTTAATTTTTGAAAACAATAGGATGCATTGGCAGTTCAGGGTGAATTGGGGTTGTTGGAGGGAAGAACAGCCGCACTGATACACCCAGCAGTGATGGCCGGGCTATTCGGGTTCACATTATGGACTGGTTATCTGGGTTGGCAATGGCGTAGAATTAGAACTATTCAAACTGAGATTACTGAACTTAAGAAGCAGATTAAGCCTGTTGCTGTTACTCCTGATGGCACTCCTGATAATCCTGCTCCTCTTTCCCCCTTTGACTCCAAAATTCAGCAGCTTACTCAGGTGATTGTTAATCTTTCTATTTTGGGGATTTCAATGGATTGATTAATTTATTTATCACTTTTTTGTGTGGTGCAAATGATTTCTTTCAATTGCAATGGAAACAGTTAGTTAAGTGGTCCGATAATTCGAAATGGTCAGAGGGACAGTACTGGTTTTGAAATGTTTGGGAAATGTGACAACATTTTCTGAATTAGTTGTTGATCATAGTTCCATACATTGAAACTTCAGTGCATTATTGCAGAGGAGGTGGAAATCCTAACTCATAGAAGTATATTTGACTAGTGTTGTTCTCAAGTTTTCAACATCTGAAAATTTTGTCATGTTTTCTGAAGTAGTAGAGTAGTAGATGATTGAGCGAGTATGCAAAGATACTCATATTCTGTATTGAGTGATGGAAAGAGAATGTGAATTACACTATCAGTATAGATGATGTTTCATTATACTTTGTTTTTGAAGTGCTTGATATGGTTAGCACTTACTTAATTAGGAATCTCCAAAGGATTTGAATAGCAAACCTCTGGGTAAAGAGATGAACCTTGATCAGTTGATAAAGAATCCAGCTTTCATATGATATCTTGTTATATATATGATCAACGTTTGTCCTACACAATCCAATGTGGTCGAGAGGAGGATTTGTGAAAGTGATTCTAGCAATGGCTGTTGGGACAGAAGCTTTATAGCATGTTTGGTATATTACTTTTCAAGTGTAGGAAATGGAATCAATTAACTAATTCCATTACCTATTGTTTGGTACGAGAGATGGGCAACACACTCCATTTCCAAAGGGTAACCATTCCCACCAATATGTTACCTCTCCTAACCTTGTGGTAACAAAGTGTTACCCTCCTCCCTGCCTAATTTGATACAAACAACAAATAATGATATCACTTAAACATTACCATTTCTCCTTCTTAAATGTTTCCAATCCATTTCCTTTCCTAGATTCATACCAAACATGCACTTAGGATAGACCATGTTGGTAGCATTTAGAAAGGCATTTAAGAGGGAATATGACATTGAATATTTAGCTCAAATAGACATACATGAAGTACGGAGTATATGTTATCCTATGGCTATTTAGTTCTTGTTTTTTGTTTGATTGGCTTGCTCGCTTTGCTTTTAGTTGGTTCTTAACTATTTGCAACTTATACTTGTCTTGCATCTCTGACTTGAACAGATAAACCCCTTTGTACGTTATTTGGAAAGTTTATTGTTCATGGTAATGACAAAAAGGACTCATCCATTTCAACTCAAGAATGTCGTTCACTAAGTTGTTAGGCCTACATAAAGTATAAGAAAACCCTTTCTACTTTCTAGCCTTATCTTAGTACCAAGAATCCAGGATAGTTTAACTACCTGTTTCTATCAACTAAAGTCATTTACTGGTTTTGAATGTCTACTTCAACCAATCTATAAAGGGTATGATAACTGGTTTTGAATGTCTACTTCAACCAATCTATAAAGGGTATGATGTGCATTCAAGTGAAATCAGGTCAATTTGGTCCTTAAAAGTACACTAAGATCTTCGATTTTCTATGTGGTACCTAGTGTGTGAAGCAAGATCTAACCTTTAAGTTGTGGACTTGTTAAAGTTCCAACTTCCAAAATAAACATGCTAACATCCTATATGCTACTCTCTTTTGTGCATATTTATTAATTCCTTTGCGTTCATTTAGTCCTAAAGTGTTCTTTCTCTGAATGTATCCAGGAAAGGAAAGAATTATTGAAAGGGAACTTTAAGGACCGGCACTTTAACGCGGGTTCAATTTTACTGGGATTTGGTGTTTTTGAGGCAATTGGTGGAGGATTCAACACATGGATTAGAACAGGAAAGCTATTTCCAGGACCTCATTTGTTTGCTGGAGCAGGTATAGACTACTGATATCTATGCAAACAGTTGCAAATTAAAGAGAAAAATATCCCATGTCTATGTAAGTTTGCATCTGAAATTGCTTATGTTTGTTTGTTTTGCGAAAACAGCGATTACAGTGCTGTGGGCAGCAGCAGCGGCGCTTGTACCTGCAATGCAGAAAGGAAATGAAACAGCTAGAAGTCTTCATATTGCTTTGAATGCTGTAAATGTTCTTCTGTTCATATGGCAGATCCCCACCGGAATCGAAATTGTTTTCAAAGTGTTTGAATTTACTAACTGGCCTTGAATCGCGTCTAAGTCAGGTGTGGCAATATGCTAAGATTACTTGTATAAACAACAAAGTCAGTTTTGTTTATTTGTGTTTCCTTGTCCCTGAGATCCTGACCTTGTACTGTGAATAGCTTTGCACTTGCAAATATAAACTGTCTAGTGATGAAAATTGTTGTAGAATATTGTATTAAAATTCTTATACAAATGTATGGAGCTATTGTTGAAATATTAATCTAGCAAAATCTAGATAATATGATCGTAAAAAATCTAATAGTGAAATGTATTAATG

mRNA sequence

GAAATAAGAATATGTGTCGACATTGGTTGCCCTTTCATTTCCTTATCTCCTCGTCTCTTTCTCTCTCTCCTCTTTCTGCCAAAATACAGAGAGAGCGAGCATGGCTGCCACACTCTCAGCCTTGAAACTCCCCTCTCTCCCTCTCCGCATTCAATCCAAACTCCACTCTCCCTCCACCATTACTCAAACACCAACACCCCCTCAATCTAACCCTAATCTTAAATTAACCCTTTTCAATCAACAAGATTTCCTACACACATTCAAATCCTCCGCTCTCCCTCTCTCCACTCTCGCATTACCCTTCCTTCTAGATGCCCAGGATGCATTGGCAGTTCAGGGTGAATTGGGGTTGTTGGAGGGAAGAACAGCCGCACTGATACACCCAGCAGTGATGGCCGGGCTATTCGGGTTCACATTATGGACTGGTTATCTGGGTTGGCAATGGCGTAGAATTAGAACTATTCAAACTGAGATTACTGAACTTAAGAAGCAGATTAAGCCTGTTGCTGTTACTCCTGATGGCACTCCTGATAATCCTGCTCCTCTTTCCCCCTTTGACTCCAAAATTCAGCAGCTTACTCAGGAAAGGAAAGAATTATTGAAAGGGAACTTTAAGGACCGGCACTTTAACGCGGGTTCAATTTTACTGGGATTTGGTGTTTTTGAGGCAATTGGTGGAGGATTCAACACATGGATTAGAACAGGAAAGCTATTTCCAGGACCTCATTTGTTTGCTGGAGCAGCGATTACAGTGCTGTGGGCAGCAGCAGCGGCGCTTGTACCTGCAATGCAGAAAGGAAATGAAACAGCTAGAAGTCTTCATATTGCTTTGAATGCTGTAAATGTTCTTCTGTTCATATGGCAGATCCCCACCGGAATCGAAATTGTTTTCAAAGTGTTTGAATTTACTAACTGGCCTTGAATCGCGTCTAAGTCAGGTGTGGCAATATGCTAAGATTACTTGTATAAACAACAAAGTCAGTTTTGTTTATTTGTGTTTCCTTGTCCCTGAGATCCTGACCTTGTACTGTGAATAGCTTTGCACTTGCAAATATAAACTGTCTAGTGATGAAAATTGTTGTAGAATATTGTATTAAAATTCTTATACAAATGTATGGAGCTATTGTTGAAATATTAATCTAGCAAAATCTAGATAATATGATCGTAAAAAATCTAATAGTGAAATGTATTAATG

Coding sequence (CDS)

ATGGCTGCCACACTCTCAGCCTTGAAACTCCCCTCTCTCCCTCTCCGCATTCAATCCAAACTCCACTCTCCCTCCACCATTACTCAAACACCAACACCCCCTCAATCTAACCCTAATCTTAAATTAACCCTTTTCAATCAACAAGATTTCCTACACACATTCAAATCCTCCGCTCTCCCTCTCTCCACTCTCGCATTACCCTTCCTTCTAGATGCCCAGGATGCATTGGCAGTTCAGGGTGAATTGGGGTTGTTGGAGGGAAGAACAGCCGCACTGATACACCCAGCAGTGATGGCCGGGCTATTCGGGTTCACATTATGGACTGGTTATCTGGGTTGGCAATGGCGTAGAATTAGAACTATTCAAACTGAGATTACTGAACTTAAGAAGCAGATTAAGCCTGTTGCTGTTACTCCTGATGGCACTCCTGATAATCCTGCTCCTCTTTCCCCCTTTGACTCCAAAATTCAGCAGCTTACTCAGGAAAGGAAAGAATTATTGAAAGGGAACTTTAAGGACCGGCACTTTAACGCGGGTTCAATTTTACTGGGATTTGGTGTTTTTGAGGCAATTGGTGGAGGATTCAACACATGGATTAGAACAGGAAAGCTATTTCCAGGACCTCATTTGTTTGCTGGAGCAGCGATTACAGTGCTGTGGGCAGCAGCAGCGGCGCTTGTACCTGCAATGCAGAAAGGAAATGAAACAGCTAGAAGTCTTCATATTGCTTTGAATGCTGTAAATGTTCTTCTGTTCATATGGCAGATCCCCACCGGAATCGAAATTGTTTTCAAAGTGTTTGAATTTACTAACTGGCCTTGA

Protein sequence

MAATLSALKLPSLPLRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTFKSSALPLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIRTIQTEITELKKQIKPVAVTPDGTPDNPAPLSPFDSKIQQLTQERKELLKGNFKDRHFNAGSILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARSLHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo01153.1	Spo01153.1	mRNA

Homology

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BLAST of Spo01153.1 vs. NCBI nr
Match: gi|902239441|gb|KNA25600.1| (hypothetical protein SOVF_005170 [Spinacia oleracea])

HSP 1 Score: 537.7 bits (1384), Expect = 1.200e-149
Identity = 272/273 (99.63%), Postives = 272/273 (99.63%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLPLRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTFKSSALP 60
           MAATLSALKLPSLPLRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTFKSSALP
Sbjct: 1   MAATLSALKLPSLPLRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTFKSSALP 60

Query: 61  LSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIRT 120
           LSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIRT
Sbjct: 61  LSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIRT 120

Query: 121 IQTEITELKKQIKPVAVTPDGTPDNPAPLSPFDSKIQQLTQERKELLKGNFKDRHFNAGS 180
           IQTEITELKKQIKPVAVTPDGTPDNPAP SPFDSKIQQLTQERKELLKGNFKDRHFNAGS
Sbjct: 121 IQTEITELKKQIKPVAVTPDGTPDNPAPPSPFDSKIQQLTQERKELLKGNFKDRHFNAGS 180

Query: 181 ILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARSL 240
           ILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARSL
Sbjct: 181 ILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARSL 240

Query: 241 HIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           HIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP
Sbjct: 241 HIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 273

[Close]

BLAST of Spo01153.1 vs. NCBI nr
Match: gi|731311176|ref|XP_010693091.1| (PREDICTED: uncharacterized protein LOC104906052 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 415.6 bits (1067), Expect = 6.600e-113
Identity = 214/274 (78.10%), Postives = 239/274 (87.23%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLP-LRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTFKSSAL 60
           MAATLS  KLP+LP LR QSK H P T   T TPP+SNP L+LT   +Q F H+ KSS L
Sbjct: 1   MAATLSTFKLPTLPPLRAQSKHHIPPTQI-TVTPPKSNPILRLTHIKEQLF-HSLKSSPL 60

Query: 61  PLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIR 120
            LST+ALPF+LD QDALAV+G+ GL EGRT ALIHPAVM GLF +TLW GYLGWQWRRIR
Sbjct: 61  SLSTIALPFILDTQDALAVEGKFGLFEGRTFALIHPAVMGGLFLYTLWAGYLGWQWRRIR 120

Query: 121 TIQTEITELKKQIKPVAVTPDGTPDNPAPLSPFDSKIQQLTQERKELLKGNFKDRHFNAG 180
           TIQ EI+ELK+Q+KPVAVTPDGTP   AP SP ++KIQ+LT+ERK+LLKGNF+DRHFNAG
Sbjct: 121 TIQNEISELKQQVKPVAVTPDGTPS--APPSPVETKIQELTEERKQLLKGNFRDRHFNAG 180

Query: 181 SILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARS 240
           S+LLGFGVFEA+GGG NTW+RTGKLFPGPHLFAGA ITVLWAAAAALVPAMQKGNETARS
Sbjct: 181 SLLLGFGVFEAVGGGVNTWMRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKGNETARS 240

Query: 241 LHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           LHIALNAVNV+LF+WQIPTGI+IVFKVFEFTNWP
Sbjct: 241 LHIALNAVNVILFVWQIPTGIDIVFKVFEFTNWP 270

[Close]

BLAST of Spo01153.1 vs. NCBI nr
Match: gi|460368308|ref|XP_004230009.1| (PREDICTED: uncharacterized protein LOC101260575 [Solanum lycopersicum])

HSP 1 Score: 372.1 bits (954), Expect = 8.400e-100
Identity = 194/280 (69.29%), Postives = 224/280 (80.00%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLPLRIQSKL------HSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTF 60
           MAATLS LKLP LP + + K+      HSP T+        S  + KL L    D +   
Sbjct: 1   MAATLSLLKLPILPSKPKFKISIPSCKHSPVTLLPQQCHQDSYNHQKLLL---HDTIEQL 60

Query: 61  KSSALPLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQ 120
           KS++LPL+ L LPF LDAQDA A  GE G+ EGR+ ALIHP VM GLF +TL+ GYLGWQ
Sbjct: 61  KSASLPLTALTLPFFLDAQDAFAAGGEFGIFEGRSFALIHPIVMGGLFVYTLYAGYLGWQ 120

Query: 121 WRRIRTIQTEITELKKQIKPVAVTPDGTP-DNPAPLSPFDSKIQQLTQERKELLKGNFKD 180
           WRR+RTIQ EI ELKK++KPVAVTP+GTP +NP P SP ++KIQQLT+ERKEL+KG+F+D
Sbjct: 121 WRRVRTIQNEINELKKEVKPVAVTPEGTPVENPKP-SPVEAKIQQLTEERKELIKGSFRD 180

Query: 181 RHFNAGSILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKG 240
           RHFNAGSILLGFGV EAI GG NTW+RTGKLFPGPHLFAGA ITVLWA AAALVPAMQKG
Sbjct: 181 RHFNAGSILLGFGVSEAIFGGLNTWLRTGKLFPGPHLFAGAGITVLWAVAAALVPAMQKG 240

Query: 241 NETARSLHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           NETARSLHIALNA+NV+LF+WQIPTGI+IVFKVF+FTNWP
Sbjct: 241 NETARSLHIALNAINVILFVWQIPTGIDIVFKVFQFTNWP 276

[Close]

BLAST of Spo01153.1 vs. NCBI nr
Match: gi|565345332|ref|XP_006339751.1| (PREDICTED: uncharacterized protein LOC102594273 [Solanum tuberosum])

HSP 1 Score: 370.2 bits (949), Expect = 3.200e-99
Identity = 194/280 (69.29%), Postives = 223/280 (79.64%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLPLRIQSKL------HSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTF 60
           MAATLS LKLP LP + + K+      HSP T+        S    KL L    D +   
Sbjct: 1   MAATLSLLKLPILPSKPKFKISIPSCKHSPVTLLPQQCHQDSYNPQKLLL---HDTIEQL 60

Query: 61  KSSALPLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQ 120
           KS++LPL+ L  PF LDAQDA A  GE G+ EGR+ ALIHP VM+GLF +TL+ GYLGWQ
Sbjct: 61  KSASLPLTALTFPFFLDAQDAFAAGGEFGIFEGRSFALIHPIVMSGLFVYTLYAGYLGWQ 120

Query: 121 WRRIRTIQTEITELKKQIKPVAVTPDGTP-DNPAPLSPFDSKIQQLTQERKELLKGNFKD 180
           WRR+RTIQ EI ELKK++KPV VTP+GTP +NP P SP ++KIQQLT+ERKEL+KG+F+D
Sbjct: 121 WRRVRTIQNEINELKKEVKPVTVTPEGTPIENPKP-SPVEAKIQQLTEERKELIKGSFRD 180

Query: 181 RHFNAGSILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKG 240
           RHFNAGSILLGFGV EAI GG NTW+RTGKLFPGPHLFAGA ITVLWAAAAALVPAMQKG
Sbjct: 181 RHFNAGSILLGFGVTEAIFGGLNTWLRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKG 240

Query: 241 NETARSLHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           NETARSLHIALNA+NV+LF+WQIPTGI+IVFKVFEFTNWP
Sbjct: 241 NETARSLHIALNALNVILFVWQIPTGIDIVFKVFEFTNWP 276

[Close]

BLAST of Spo01153.1 vs. NCBI nr
Match: gi|970003233|ref|XP_015062392.1| (PREDICTED: uncharacterized protein LOC107008019 [Solanum pennellii])

HSP 1 Score: 369.4 bits (947), Expect = 5.400e-99
Identity = 192/280 (68.57%), Postives = 225/280 (80.36%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLPLRIQSKL------HSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTF 60
           MAATLS LKLP LP + + K+      HSP T+        S  + KL L    + +   
Sbjct: 1   MAATLSLLKLPILPSKPKFKISIPSCKHSPVTLLPQQCHQDSYNHQKLLL---HETIEQL 60

Query: 61  KSSALPLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQ 120
           KS++LPL+ L LPF LDAQDA A  GE G+ EGR+ ALIHP VM+GLF +TL+ GYLGWQ
Sbjct: 61  KSASLPLTALTLPFFLDAQDAFAAGGEFGIFEGRSFALIHPIVMSGLFVYTLYAGYLGWQ 120

Query: 121 WRRIRTIQTEITELKKQIKPVAVTPDGTP-DNPAPLSPFDSKIQQLTQERKELLKGNFKD 180
           WRR+RTIQ EI ELKK++KPVAVTP+GTP +NP P SP ++KIQQLT+ERKEL+KG+F+D
Sbjct: 121 WRRVRTIQNEINELKKEVKPVAVTPEGTPIENPKP-SPVEAKIQQLTEERKELIKGSFRD 180

Query: 181 RHFNAGSILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKG 240
           RHFNAGSILLGFGV EAI GG NTW+RTGKLFPGPHLFAGA ITVLWA AAALVPAMQKG
Sbjct: 181 RHFNAGSILLGFGVSEAIFGGLNTWLRTGKLFPGPHLFAGAGITVLWAVAAALVPAMQKG 240

Query: 241 NETARSLHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           NETARSLHIA+NA+NV+LF+WQIPTGI+IVFKVF+FTNWP
Sbjct: 241 NETARSLHIAMNALNVILFVWQIPTGIDIVFKVFQFTNWP 276

[Close]

BLAST of Spo01153.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1J7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_005170 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 8.100e-150
Identity = 272/273 (99.63%), Postives = 272/273 (99.63%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLPLRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTFKSSALP 60
           MAATLSALKLPSLPLRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTFKSSALP
Sbjct: 1   MAATLSALKLPSLPLRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTFKSSALP 60

Query: 61  LSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIRT 120
           LSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIRT
Sbjct: 61  LSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIRT 120

Query: 121 IQTEITELKKQIKPVAVTPDGTPDNPAPLSPFDSKIQQLTQERKELLKGNFKDRHFNAGS 180
           IQTEITELKKQIKPVAVTPDGTPDNPAP SPFDSKIQQLTQERKELLKGNFKDRHFNAGS
Sbjct: 121 IQTEITELKKQIKPVAVTPDGTPDNPAPPSPFDSKIQQLTQERKELLKGNFKDRHFNAGS 180

Query: 181 ILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARSL 240
           ILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARSL
Sbjct: 181 ILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARSL 240

Query: 241 HIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           HIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP
Sbjct: 241 HIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 273

[Close]

BLAST of Spo01153.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FX43_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g002550 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 4.600e-113
Identity = 214/274 (78.10%), Postives = 239/274 (87.23%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLP-LRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTFKSSAL 60
           MAATLS  KLP+LP LR QSK H P T   T TPP+SNP L+LT   +Q F H+ KSS L
Sbjct: 1   MAATLSTFKLPTLPPLRAQSKHHIPPTQI-TVTPPKSNPILRLTHIKEQLF-HSLKSSPL 60

Query: 61  PLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIR 120
            LST+ALPF+LD QDALAV+G+ GL EGRT ALIHPAVM GLF +TLW GYLGWQWRRIR
Sbjct: 61  SLSTIALPFILDTQDALAVEGKFGLFEGRTFALIHPAVMGGLFLYTLWAGYLGWQWRRIR 120

Query: 121 TIQTEITELKKQIKPVAVTPDGTPDNPAPLSPFDSKIQQLTQERKELLKGNFKDRHFNAG 180
           TIQ EI+ELK+Q+KPVAVTPDGTP   AP SP ++KIQ+LT+ERK+LLKGNF+DRHFNAG
Sbjct: 121 TIQNEISELKQQVKPVAVTPDGTPS--APPSPVETKIQELTEERKQLLKGNFRDRHFNAG 180

Query: 181 SILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARS 240
           S+LLGFGVFEA+GGG NTW+RTGKLFPGPHLFAGA ITVLWAAAAALVPAMQKGNETARS
Sbjct: 181 SLLLGFGVFEAVGGGVNTWMRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKGNETARS 240

Query: 241 LHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           LHIALNAVNV+LF+WQIPTGI+IVFKVFEFTNWP
Sbjct: 241 LHIALNAVNVILFVWQIPTGIDIVFKVFEFTNWP 270

[Close]

BLAST of Spo01153.1 vs. UniProtKB/TrEMBL
Match: K4B012_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 5.900e-100
Identity = 194/280 (69.29%), Postives = 224/280 (80.00%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLPLRIQSKL------HSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTF 60
           MAATLS LKLP LP + + K+      HSP T+        S  + KL L    D +   
Sbjct: 1   MAATLSLLKLPILPSKPKFKISIPSCKHSPVTLLPQQCHQDSYNHQKLLL---HDTIEQL 60

Query: 61  KSSALPLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQ 120
           KS++LPL+ L LPF LDAQDA A  GE G+ EGR+ ALIHP VM GLF +TL+ GYLGWQ
Sbjct: 61  KSASLPLTALTLPFFLDAQDAFAAGGEFGIFEGRSFALIHPIVMGGLFVYTLYAGYLGWQ 120

Query: 121 WRRIRTIQTEITELKKQIKPVAVTPDGTP-DNPAPLSPFDSKIQQLTQERKELLKGNFKD 180
           WRR+RTIQ EI ELKK++KPVAVTP+GTP +NP P SP ++KIQQLT+ERKEL+KG+F+D
Sbjct: 121 WRRVRTIQNEINELKKEVKPVAVTPEGTPVENPKP-SPVEAKIQQLTEERKELIKGSFRD 180

Query: 181 RHFNAGSILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKG 240
           RHFNAGSILLGFGV EAI GG NTW+RTGKLFPGPHLFAGA ITVLWA AAALVPAMQKG
Sbjct: 181 RHFNAGSILLGFGVSEAIFGGLNTWLRTGKLFPGPHLFAGAGITVLWAVAAALVPAMQKG 240

Query: 241 NETARSLHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           NETARSLHIALNA+NV+LF+WQIPTGI+IVFKVF+FTNWP
Sbjct: 241 NETARSLHIALNAINVILFVWQIPTGIDIVFKVFQFTNWP 276

[Close]

BLAST of Spo01153.1 vs. UniProtKB/TrEMBL
Match: M0ZGL4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000125 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.200e-99
Identity = 194/280 (69.29%), Postives = 223/280 (79.64%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLPLRIQSKL------HSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTF 60
           MAATLS LKLP LP + + K+      HSP T+        S    KL L    D +   
Sbjct: 1   MAATLSLLKLPILPSKPKFKISIPSCKHSPVTLLPQQCHQDSYNPQKLLL---HDTIEQL 60

Query: 61  KSSALPLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQ 120
           KS++LPL+ L  PF LDAQDA A  GE G+ EGR+ ALIHP VM+GLF +TL+ GYLGWQ
Sbjct: 61  KSASLPLTALTFPFFLDAQDAFAAGGEFGIFEGRSFALIHPIVMSGLFVYTLYAGYLGWQ 120

Query: 121 WRRIRTIQTEITELKKQIKPVAVTPDGTP-DNPAPLSPFDSKIQQLTQERKELLKGNFKD 180
           WRR+RTIQ EI ELKK++KPV VTP+GTP +NP P SP ++KIQQLT+ERKEL+KG+F+D
Sbjct: 121 WRRVRTIQNEINELKKEVKPVTVTPEGTPIENPKP-SPVEAKIQQLTEERKELIKGSFRD 180

Query: 181 RHFNAGSILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKG 240
           RHFNAGSILLGFGV EAI GG NTW+RTGKLFPGPHLFAGA ITVLWAAAAALVPAMQKG
Sbjct: 181 RHFNAGSILLGFGVTEAIFGGLNTWLRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKG 240

Query: 241 NETARSLHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           NETARSLHIALNA+NV+LF+WQIPTGI+IVFKVFEFTNWP
Sbjct: 241 NETARSLHIALNALNVILFVWQIPTGIDIVFKVFEFTNWP 276

[Close]

BLAST of Spo01153.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HTR6_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 8.500e-99
Identity = 194/280 (69.29%), Postives = 221/280 (78.93%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLP------LRIQSKLHSPSTITQTPTPPQSNPNLKLTLFNQQDFLHTF 60
           MAATLS LKLP LP      + I S  HSP T+        S    KL L    D +   
Sbjct: 1   MAATLSLLKLPILPSKPKFKISIPSXKHSPVTLLPQQCHQDSYNPQKLLL---HDTIEQL 60

Query: 61  KSSALPLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQ 120
           KS++LPL+ L  PF LDAQDA A  GE G+ EGR+ ALIHP VM+GLF +TL+ GYLGWQ
Sbjct: 61  KSASLPLTALTFPFFLDAQDAFAAGGEFGIFEGRSFALIHPIVMSGLFXYTLYAGYLGWQ 120

Query: 121 WRRIRTIQTEITELKKQIKPVAVTPDGTP-DNPAPLSPFDSKIQQLTQERKELLKGNFKD 180
           WRR+RTIQ EI ELKK+ KPV VTP+GTP +NP P SP ++KIQQLT+ERKEL+KG+F+D
Sbjct: 121 WRRVRTIQNEINELKKEXKPVTVTPEGTPVENPKP-SPVEAKIQQLTEERKELIKGSFRD 180

Query: 181 RHFNAGSILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKG 240
           RHFNAGSILLGFGV EAI GG NTW+RTGKLFPGPHLFAGA ITVLWAAAAALVPAMQKG
Sbjct: 181 RHFNAGSILLGFGVSEAIFGGLNTWLRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKG 240

Query: 241 NETARSLHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           +ETARSLHIALNA+NV+LF+WQIPTGI+IVFKVFEFTNWP
Sbjct: 241 SETARSLHIALNALNVILFVWQIPTGIDIVFKVFEFTNWP 276

[Close]

BLAST of Spo01153.1 vs. TAIR (Arabidopsis)
Match: AT3G61870.1 (unknown protein)

HSP 1 Score: 340.1 bits (871), Expect = 1.200e-93
Identity = 174/276 (63.04%), Postives = 214/276 (77.54%), Query Frame = 1

		  
Query: 1   MAATLSALKLPSLPLRIQSKLHSPSTITQT-PTPPQSNPNLKLTLFNQQDFLHTFKSSAL 60
           MA TL  L      L +  + H P T+    P   +S P     + +  + L   KSS+L
Sbjct: 1   MATTLHCLST----LHLLPRTHHPKTLNSLKPITTKSQPCKTPEIPSTPNALQLLKSSSL 60

Query: 61  PLSTLALPFLLDAQDALAVQGELGLLEGRTAALIHPAVMAGLFGFTLWTGYLGWQWRRIR 120
           PL+ +ALPF LD QDA A  GE G+LEGR+ ALIHP VM GLF +TLWTGYLGWQWRR+R
Sbjct: 61  PLAVIALPFFLDPQDAAAAGGEFGILEGRSFALIHPIVMGGLFAYTLWTGYLGWQWRRVR 120

Query: 121 TIQTEITELKKQIKPVAVTPDGTP--DNPAPLSPFDSKIQQLTQERKELLKGNFKDRHFN 180
           TIQ+EI++LKKQ+KP  V+PDG+   D+ +P S  + +IQ+LT+ERKEL+KG+++D+HF+
Sbjct: 121 TIQSEISDLKKQLKPTPVSPDGSTAVDSSSPPSTTELQIQRLTEERKELVKGSYRDKHFD 180

Query: 181 AGSILLGFGVFEAIGGGFNTWIRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETA 240
           AGS+LLGFGV EA+ GG NT++RTGKLFPGPHL+AGA ITVLWAAAAALVPAMQKGN+TA
Sbjct: 181 AGSVLLGFGVLEAVFGGVNTYLRTGKLFPGPHLYAGAGITVLWAAAAALVPAMQKGNDTA 240

Query: 241 RSLHIALNAVNVLLFIWQIPTGIEIVFKVFEFTNWP 274
           RSLHIALNAVNVLLFIWQIPTG++IV KVFEFT WP
Sbjct: 241 RSLHIALNAVNVLLFIWQIPTGLDIVLKVFEFTKWP 272

The following BLAST results are available for this feature:

BLAST of Spo01153.1 vs. NCBI nr
BLAST of Spo01153.1 vs. UniProtKB/TrEMBL
BLAST of Spo01153.1 vs. ExPASy Swiss-Prot
BLAST of Spo01153.1 vs. TAIR (Arabidopsis)

BLAST of Spo01153.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902239441\|gb\|KNA25600.1\|	1.2e-149	99.6	hypothetical protein SOVF_0051...	[more]
gi\|731311176\|ref\|XP_010693091.1\|	6.6e-113	78.1	PREDICTED: uncharacterized pro...	[more]
gi\|460368308\|ref\|XP_004230009.1\|	8.4e-100	69.2	PREDICTED: uncharacterized pro...	[more]
gi\|565345332\|ref\|XP_006339751.1\|	3.2e-99	69.2	PREDICTED: uncharacterized pro...	[more]
gi\|970003233\|ref\|XP_015062392.1\|	5.4e-99	68.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo01153.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9S1J7_SPIOL	8.1e-150	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8FX43_BETVU	4.6e-113	78.1	Uncharacterized protein OS=Bet...	[more]
K4B012_SOLLC	5.9e-100	69.2	Uncharacterized protein OS=Sol...	[more]
M0ZGL4_SOLTU	2.2e-99	69.2	Uncharacterized protein OS=Sol...	[more]
A0A0V0HTR6_SOLCH	8.5e-99	69.2	Putative ovule protein OS=Sola...	[more]

BLAST of Spo01153.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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x 1


Match Name	E-value	Identity	Description

BLAST of Spo01153.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT3G61870.1	1.2e-93	63.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025067	Protein of unknown function DUF4079	PFAM	PF13301	DUF4079	coord: 91..266 score: 7.2
None	No IPR available	PANTHER	PTHR34679	FAMILY NOT NAMED	coord: 2..273 score: 1.1E
None	No IPR available	PANTHER	PTHR34679:SF2	SUBFAMILY NOT NAMED	coord: 2..273 score: 1.1E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0009534	chloroplast thylakoid

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17491	0.71	Barchart \| Table
Spo20952	0.69	Barchart \| Table
Spo23363	0.69	Barchart \| Table
Spo07610	0.68	Barchart \| Table
Spo25783	0.68	Barchart \| Table
Spo07297	0.66	Barchart \| Table