Spo01162 (gene) | SpinachBase

Overview


Name	Spo01162
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Invertase inhibitor
Location	chr2 : 57736192 .. 57736728 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTACCATTTCTTCTCCTCTTTATTAACCTTACACTATCTGCCACCCCTACCTTTACACACCCTTACCACAAGATCACCAATGACCTCGTGACCATCACGTGCAAGCAAACACCCGACCCGACACTCTGTGAAGCTGAGCTCAGGGCCGACCCACGAAGCTCCAAGGCTGCTGATACCGAAAGCTTGATCCTAATCATGATAGATGATGTCAAAACCCGGTTCATGGATTCACTTCAATATGTTCAATACTTGAACCGGAAGACTCATGACCCGGATACAATCCGGGCCCTGCATGAGTGTATTTGGGTTTACGGGGTTGTGCTGGATACAAGTATTGATTTAGCAGTGAGAGCAGTAAAACAAGGGAATCCGAAATTCGGGGAACAAGCTATGGTGGATGCAGGTAACGAAGCTGAGGCGTGCCGGAGGGGTTTCCCGGAGGATAAGGTTCCGGCTCGAATCACGGTTCAGACACCGAAGCTCCATGGTGTGTCTAATGTGGCTGCTTCTTTGATTAGGACTATGGAGTGA

mRNA sequence

ATGAATTTACCATTTCTTCTCCTCTTTATTAACCTTACACTATCTGCCACCCCTACCTTTACACACCCTTACCACAAGATCACCAATGACCTCGTGACCATCACGTGCAAGCAAACACCCGACCCGACACTCTGTGAAGCTGAGCTCAGGGCCGACCCACGAAGCTCCAAGGCTGCTGATACCGAAAGCTTGATCCTAATCATGATAGATGATGTCAAAACCCGGTTCATGGATTCACTTCAATATGTTCAATACTTGAACCGGAAGACTCATGACCCGGATACAATCCGGGCCCTGCATGAGTGTATTTGGGTTTACGGGGTTGTGCTGGATACAAGTATTGATTTAGCAGTGAGAGCAGTAAAACAAGGGAATCCGAAATTCGGGGAACAAGCTATGGTGGATGCAGGTAACGAAGCTGAGGCGTGCCGGAGGGGTTTCCCGGAGGATAAGGTTCCGGCTCGAATCACGGTTCAGACACCGAAGCTCCATGGTGTGTCTAATGTGGCTGCTTCTTTGATTAGGACTATGGAGTGA

Coding sequence (CDS)

ATGAATTTACCATTTCTTCTCCTCTTTATTAACCTTACACTATCTGCCACCCCTACCTTTACACACCCTTACCACAAGATCACCAATGACCTCGTGACCATCACGTGCAAGCAAACACCCGACCCGACACTCTGTGAAGCTGAGCTCAGGGCCGACCCACGAAGCTCCAAGGCTGCTGATACCGAAAGCTTGATCCTAATCATGATAGATGATGTCAAAACCCGGTTCATGGATTCACTTCAATATGTTCAATACTTGAACCGGAAGACTCATGACCCGGATACAATCCGGGCCCTGCATGAGTGTATTTGGGTTTACGGGGTTGTGCTGGATACAAGTATTGATTTAGCAGTGAGAGCAGTAAAACAAGGGAATCCGAAATTCGGGGAACAAGCTATGGTGGATGCAGGTAACGAAGCTGAGGCGTGCCGGAGGGGTTTCCCGGAGGATAAGGTTCCGGCTCGAATCACGGTTCAGACACCGAAGCTCCATGGTGTGTCTAATGTGGCTGCTTCTTTGATTAGGACTATGGAGTGA

Protein sequence

MNLPFLLLFINLTLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAADTESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARITVQTPKLHGVSNVAASLIRTME

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo01162.1	Spo01162.1	mRNA

Homology

[Close]

BLAST of Spo01162.1 vs. NCBI nr
Match: gi|902219391|gb|KNA18310.1| (hypothetical protein SOVF_072060 [Spinacia oleracea])

HSP 1 Score: 356.7 bits (914), Expect = 2.400e-95
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1

		  
Query: 1   MNLPFLLLFINLTLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAAD 60
           MNLPFLLLFINLTLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAAD
Sbjct: 1   MNLPFLLLFINLTLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAAD 60

Query: 61  TESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVRA 120
           TESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVRA
Sbjct: 61  TESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVRA 120

Query: 121 VKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARITVQTPKLHGVSNVAASLIRTME 179
           VKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARITVQTPKLHGVSNVAASLIRTME
Sbjct: 121 VKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARITVQTPKLHGVSNVAASLIRTME 178

[Close]

BLAST of Spo01162.1 vs. NCBI nr
Match: gi|731348205|ref|XP_010685378.1| (PREDICTED: cell wall / vacuolar inhibitor of fructosidase 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 229.6 bits (584), Expect = 4.400e-57
Identity = 126/179 (70.39%), Postives = 140/179 (78.21%), Query Frame = 1

		  
Query: 2   NLPFL-LLFINL-TLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAA 61
           +LP L LLFI L TL  T T  +   K TNDLVT TCKQTPDP LCEA LR+D RSSKAA
Sbjct: 7   SLPHLHLLFITLLTLFTTSTLAYS-RKTTNDLVTTTCKQTPDPILCEASLRSDSRSSKAA 66

Query: 62  DTESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVR 121
           D+E LILIMID VKTRF DS +YV+ L RKTHDPD IRAL EC  +Y VVLD S+ LAVR
Sbjct: 67  DSEGLILIMIDVVKTRFSDSFRYVEDLTRKTHDPDVIRALQECKQLYRVVLDVSVGLAVR 126

Query: 122 AVKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARITVQTPKLHGVSNVAASLIRTME 179
           AVKQG+PKFGEQAMVDAGNEAE CR  FPE KVP RI  +T  LHGVSNVAAS+I+++E
Sbjct: 127 AVKQGDPKFGEQAMVDAGNEAEGCRMAFPEGKVPGRIVGRTRMLHGVSNVAASMIKSLE 184

[Close]

BLAST of Spo01162.1 vs. NCBI nr
Match: gi|565478242|ref|XP_006296761.1| (hypothetical protein CARUB_v10015473mg [Capsella rubella])

HSP 1 Score: 100.5 bits (249), Expect = 3.100e-18
Identity = 59/151 (39.07%), Postives = 93/151 (61.59%), Query Frame = 1

		  
Query: 29  NDLVTITCKQTPDPTLCEAELRADPRSSKAADTESLILIMIDDVKTRFMDSLQYVQYLNR 88
           + +V +TCKQTPD TLC + LR+DPRSS +ADT  L LI++D +K    ++L  +     
Sbjct: 19  SSIVDMTCKQTPDYTLCLSLLRSDPRSS-SADTVGLALILVDKIKALGTETLGRI----N 78

Query: 89  KTHDPDTI--RALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRG 148
           + +   T+  RAL EC   Y  ++D ++  A+ A+K GNPKF E A+VD+G EA  C  G
Sbjct: 79  EAYKTKTMLKRALDECNLRYKTIVDVNVHTAIIAIK-GNPKFAEDAVVDSGVEASVCEGG 138

Query: 149 FPEDKVPARITVQTPKLHGVSNVAASLIRTM 178
           FP+ + P  +T  T ++  + +V  +++R +
Sbjct: 139 FPKGQSP--LTELTQRMDKICDVTRAIVRML 161

[Close]

BLAST of Spo01162.1 vs. NCBI nr
Match: gi|922414869|ref|XP_013592573.1| (PREDICTED: cell wall / vacuolar inhibitor of fructosidase 1 [Brassica oleracea var. oleracea])

HSP 1 Score: 99.8 bits (247), Expect = 5.200e-18
Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 1

		  
Query: 30  DLVTITCKQTPDPTLCEAELRADPRSSKAADTESLILIMIDDVKTRFMDSLQYVQYLNRK 89
           D+V  TCKQTPD +LC + LR+DPRSS +ADT  L LI++D +K    ++L  +    + 
Sbjct: 33  DIVDKTCKQTPDYSLCLSLLRSDPRSS-SADTVGLGLILVDKIKALGTETLGQINMAYKT 92

Query: 90  THDPDTIRALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRGFPE 149
              P   + L EC   Y  ++D  +  A+ A+K GNPKF E A+VDAG EA  C  GFP+
Sbjct: 93  K--PMLKKPLDECNLRYKTIVDVDVHTAIIAIK-GNPKFAEGAIVDAGVEASVCEGGFPK 152

Query: 150 DKVPARITVQTPKLHGVSNVAASLIRTM 178
            + P  IT  T K++ + +V  +++R +
Sbjct: 153 GQSP--ITGLTQKMNKICDVTRAIVRML 174

[Close]

BLAST of Spo01162.1 vs. NCBI nr
Match: gi|674893797|emb|CDY39016.1| (BnaC01g34800D [Brassica napus])

HSP 1 Score: 99.8 bits (247), Expect = 5.200e-18
Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 1

		  
Query: 30  DLVTITCKQTPDPTLCEAELRADPRSSKAADTESLILIMIDDVKTRFMDSLQYVQYLNRK 89
           D+V  TCKQTPD +LC + LR+DPRSS +ADT  L LI++D +K    ++L  +    + 
Sbjct: 33  DIVDKTCKQTPDYSLCLSLLRSDPRSS-SADTVGLGLILVDKIKALGTETLGQINMAYKT 92

Query: 90  THDPDTIRALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRGFPE 149
              P   + L EC   Y  ++D  +  A+ A+K GNPKF E A+VDAG EA  C  GFP+
Sbjct: 93  K--PMLKKPLDECNLRYKTIVDVDVHTAIIAIK-GNPKFAEGAIVDAGVEASVCEGGFPK 152

Query: 150 DKVPARITVQTPKLHGVSNVAASLIRTM 178
            + P  IT  T K++ + +V  +++R +
Sbjct: 153 GQSP--ITGLTQKMNEICDVTRAIVRML 174

[Close]

BLAST of Spo01162.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFP9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072060 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.700e-95
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1

		  
Query: 1   MNLPFLLLFINLTLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAAD 60
           MNLPFLLLFINLTLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAAD
Sbjct: 1   MNLPFLLLFINLTLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAAD 60

Query: 61  TESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVRA 120
           TESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVRA
Sbjct: 61  TESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVRA 120

Query: 121 VKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARITVQTPKLHGVSNVAASLIRTME 179
           VKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARITVQTPKLHGVSNVAASLIRTME
Sbjct: 121 VKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARITVQTPKLHGVSNVAASLIRTME 178

[Close]

BLAST of Spo01162.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BY49_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g170550 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.100e-57
Identity = 126/179 (70.39%), Postives = 140/179 (78.21%), Query Frame = 1

		  
Query: 2   NLPFL-LLFINL-TLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAA 61
           +LP L LLFI L TL  T T  +   K TNDLVT TCKQTPDP LCEA LR+D RSSKAA
Sbjct: 7   SLPHLHLLFITLLTLFTTSTLAYS-RKTTNDLVTTTCKQTPDPILCEASLRSDSRSSKAA 66

Query: 62  DTESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVR 121
           D+E LILIMID VKTRF DS +YV+ L RKTHDPD IRAL EC  +Y VVLD S+ LAVR
Sbjct: 67  DSEGLILIMIDVVKTRFSDSFRYVEDLTRKTHDPDVIRALQECKQLYRVVLDVSVGLAVR 126

Query: 122 AVKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARITVQTPKLHGVSNVAASLIRTME 179
           AVKQG+PKFGEQAMVDAGNEAE CR  FPE KVP RI  +T  LHGVSNVAAS+I+++E
Sbjct: 127 AVKQGDPKFGEQAMVDAGNEAEGCRMAFPEGKVPGRIVGRTRMLHGVSNVAASMIKSLE 184

[Close]

BLAST of Spo01162.1 vs. UniProtKB/TrEMBL
Match: R0HJ03_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10015473mg PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.100e-18
Identity = 59/151 (39.07%), Postives = 93/151 (61.59%), Query Frame = 1

		  
Query: 29  NDLVTITCKQTPDPTLCEAELRADPRSSKAADTESLILIMIDDVKTRFMDSLQYVQYLNR 88
           + +V +TCKQTPD TLC + LR+DPRSS +ADT  L LI++D +K    ++L  +     
Sbjct: 19  SSIVDMTCKQTPDYTLCLSLLRSDPRSS-SADTVGLALILVDKIKALGTETLGRI----N 78

Query: 89  KTHDPDTI--RALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRG 148
           + +   T+  RAL EC   Y  ++D ++  A+ A+K GNPKF E A+VD+G EA  C  G
Sbjct: 79  EAYKTKTMLKRALDECNLRYKTIVDVNVHTAIIAIK-GNPKFAEDAVVDSGVEASVCEGG 138

Query: 149 FPEDKVPARITVQTPKLHGVSNVAASLIRTM 178
           FP+ + P  +T  T ++  + +V  +++R +
Sbjct: 139 FPKGQSP--LTELTQRMDKICDVTRAIVRML 161

[Close]

BLAST of Spo01162.1 vs. UniProtKB/TrEMBL
Match: D7KBZ7_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_891603 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.400e-17
Identity = 56/147 (38.10%), Postives = 84/147 (57.14%), Query Frame = 1

		  
Query: 31  LVTITCKQTPDPTLCEAELRADPRSSKAADTESLILIMIDDVKTRFMDSLQYVQYLNRKT 90
           ++  TCK+TPD  LC + L +DPR S +ADT  L LI+ID +K     +L  +  L +K 
Sbjct: 11  IIEQTCKETPDFNLCVSLLNSDPRGS-SADTSGLALILIDKIKGLTTKTLNEINGLYKKR 70

Query: 91  HDPDTIRALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRGFPED 150
             P+  RAL EC   Y  +L+  +  A+ A+ +G PKFGE  ++DAG EA  C  GF   
Sbjct: 71  --PELKRALDECSRRYKTILNADVPEAIEAISKGVPKFGEDGVIDAGVEASVCEGGF--- 130

Query: 151 KVPARITVQTPKLHGVSNVAASLIRTM 178
           K  + +T  T  +  +SNV  +++R +
Sbjct: 131 KGKSPLTSLTKSMQKISNVTRAIVRML 151

[Close]

BLAST of Spo01162.1 vs. UniProtKB/TrEMBL
Match: A0A087G983_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G248000 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.800e-17
Identity = 54/149 (36.24%), Postives = 85/149 (57.05%), Query Frame = 1

		  
Query: 29  NDLVTITCKQTPDPTLCEAELRADPRSSKAADTESLILIMIDDVKTRFMDSLQYVQYLNR 88
           + ++  TCK+TPD  LC + L +DPR S +ADT  L LI++D +K     +L  +  L +
Sbjct: 16  SSMIDQTCKETPDFNLCVSLLNSDPRGS-SADTSGLALILVDKIKVLATKTLHEINGLYK 75

Query: 89  KTHDPDTIRALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRGFP 148
           K   P+  +AL EC   Y  +L+  +  A+ A+ +G PKFGE  ++DAG EA  C  GF 
Sbjct: 76  KR--PELKQALGECSRRYKTILNADVPEAIEAISKGVPKFGEDGVIDAGVEASVCEEGF- 135

Query: 149 EDKVPARITVQTPKLHGVSNVAASLIRTM 178
             K  + +T  T  +  +SNV  +++R +
Sbjct: 136 --KGKSPLTSLTKSMQKISNVTRAIVRML 158

[Close]

BLAST of Spo01162.1 vs. ExPASy Swiss-Prot
Match: CVIF1_ARATH (Cell wall / vacuolar inhibitor of fructosidase 1 OS=Arabidopsis thaliana GN=C/VIF1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.000e-18
Identity = 54/143 (37.76%), Postives = 81/143 (56.64%), Query Frame = 1

		  
Query: 31  LVTITCKQTPDPTLCEAELRADPRSSKAADTESLILIMIDDVKTRFMDSLQYVQYLNRKT 90
           ++  TCK+TPD  LC + L +DPR S +ADT  L LI+ID +K     +L  +  L +K 
Sbjct: 25  IIEPTCKETPDFNLCVSLLNSDPRGS-SADTSGLALILIDKIKGLATKTLNEINGLYKKR 84

Query: 91  HDPDTIRALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRGFPED 150
             P+  RAL EC   Y  +L+  +  A+ A+ +G PKFGE  ++DAG EA  C+ GF   
Sbjct: 85  --PELKRALDECSRRYKTILNADVPEAIEAISKGVPKFGEDGVIDAGVEASVCQGGF--- 144

Query: 151 KVPARITVQTPKLHGVSNVAASL 174
              + +T  T  +  +SNV  ++
Sbjct: 145 NGSSPLTSLTKSMQKISNVTRAI 161

[Close]

BLAST of Spo01162.1 vs. TAIR (Arabidopsis)
Match: AT1G47960.1 (cell wall / vacuolar inhibitor of fructosidase 1)

HSP 1 Score: 92.8 bits (229), Expect = 2.300e-19
Identity = 54/143 (37.76%), Postives = 81/143 (56.64%), Query Frame = 1

		  
Query: 31  LVTITCKQTPDPTLCEAELRADPRSSKAADTESLILIMIDDVKTRFMDSLQYVQYLNRKT 90
           ++  TCK+TPD  LC + L +DPR S +ADT  L LI+ID +K     +L  +  L +K 
Sbjct: 25  IIEPTCKETPDFNLCVSLLNSDPRGS-SADTSGLALILIDKIKGLATKTLNEINGLYKKR 84

Query: 91  HDPDTIRALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRGFPED 150
             P+  RAL EC   Y  +L+  +  A+ A+ +G PKFGE  ++DAG EA  C+ GF   
Sbjct: 85  --PELKRALDECSRRYKTILNADVPEAIEAISKGVPKFGEDGVIDAGVEASVCQGGF--- 144

Query: 151 KVPARITVQTPKLHGVSNVAASL 174
              + +T  T  +  +SNV  ++
Sbjct: 145 NGSSPLTSLTKSMQKISNVTRAI 161

[Close]

BLAST of Spo01162.1 vs. TAIR (Arabidopsis)
Match: AT3G17130.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.900e-13
Identity = 53/180 (29.44%), Postives = 91/180 (50.56%), Query Frame = 1

		  
Query: 2   NLPFLLLFINLTLSATPTFTHPYHKITNDLVTITCKQTPDPTLCEAELRADPRSSKAADT 61
           +LP L LF+ L L +         + ++DL+   C+ TP   LCEA LR  P S   +D 
Sbjct: 9   SLPCLSLFLLLLLPSVV-------QSSDDLIDKICQATPFCDLCEASLR--PFSPSPSDP 68

Query: 62  ESLILIMIDDVKTRFMDSLQYVQYLNRKTHDPDTIRALHECIWVYGVVLDTSIDLAVRAV 121
           +SL   M   V     D+L Y+Q L +  HDP   RAL +C  +Y  V+  +I  A+ A+
Sbjct: 69  KSLGAAMASVVLGNMTDTLGYIQSLIKHAHDPAAERALAQCAELYRPVVKFNIPQAMEAM 128

Query: 122 KQGNPKFGEQAMVDAGNEAEACRRGF----PEDKVPARITVQTPKLHGVSNVAASLIRTM 178
           + G   F    + DA  + ++C++G      +D+    +T +   +  + +VA S+++++
Sbjct: 129 QGGKFGFAIYVLGDAEKQTDSCQKGITNAGADDESSVAVTARNKLVKNLCDVAISVLKSL 179

[Close]

BLAST of Spo01162.1 vs. TAIR (Arabidopsis)
Match: AT3G17140.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 4.000e-8
Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 1

		  
Query: 97  RALHECIWVYGVVLDTSIDLAVRAVKQGNPKFGEQAMVDAGNEAEACRRGFPEDKVPARI 156
           + L EC   Y  ++D  +  A+ ++K GNPKF E A+VDAG EA  C  GF + + P  +
Sbjct: 34  KPLDECSMRYKTIVDVDVHTAIISIK-GNPKFAEGAVVDAGVEASICEGGFTKGQSP--L 93

Query: 157 TVQTPKLHGVSNVAASLIRTM 178
           T  T ++  + +V  ++IR +
Sbjct: 94  TSLTQRMEKICDVTRAIIRML 111

The following BLAST results are available for this feature:

BLAST of Spo01162.1 vs. NCBI nr
BLAST of Spo01162.1 vs. UniProtKB/TrEMBL
BLAST of Spo01162.1 vs. ExPASy Swiss-Prot
BLAST of Spo01162.1 vs. TAIR (Arabidopsis)

BLAST of Spo01162.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902219391\|gb\|KNA18310.1\|	2.4e-95	100.	hypothetical protein SOVF_0720...	[more]
gi\|731348205\|ref\|XP_010685378.1\|	4.4e-57	70.3	PREDICTED: cell wall / vacuola...	[more]
gi\|565478242\|ref\|XP_006296761.1\|	3.1e-18	39.0	hypothetical protein CARUB_v10...	[more]
gi\|922414869\|ref\|XP_013592573.1\|	5.2e-18	40.5	PREDICTED: cell wall / vacuola...	[more]
gi\|674893797\|emb\|CDY39016.1\|	5.2e-18	40.5	BnaC01g34800D [Brassica napus]	[more]

BLAST of Spo01162.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RFP9_SPIOL	1.7e-95	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BY49_BETVU	3.1e-57	70.3	Uncharacterized protein OS=Bet...	[more]
R0HJ03_9BRAS	2.1e-18	39.0	Uncharacterized protein OS=Cap...	[more]
D7KBZ7_ARALL	1.4e-17	38.1	Putative uncharacterized prote...	[more]
A0A087G983_ARAAL	1.8e-17	36.2	Uncharacterized protein OS=Ara...	[more]

BLAST of Spo01162.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
CVIF1_ARATH	4.0e-18	37.7	Cell wall / vacuolar inhibitor...	[more]

BLAST of Spo01162.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
AT1G47960.1	2.3e-19	37.7	cell wall / vacuolar inhibitor...	[more]
AT3G17130.1	1.9e-13	29.4	Plant invertase/pectin methyle...	[more]
AT3G17140.1	4.0e-8	35.8	Plant invertase/pectin methyle...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006501	Pectinesterase inhibitor domain	GENE3D	1.20.140.40		coord: 28..177 score: 5.0
IPR006501	Pectinesterase inhibitor domain	PFAM	PF04043	PMEI	coord: 31..158 score: 4.4
IPR006501	Pectinesterase inhibitor domain	SMART	SM00856	PMEI_2	coord: 27..173 score: 8.0
IPR006501	Pectinesterase inhibitor domain	TIGRFAMs	TIGR01614	TIGR01614	coord: 5..176 score: 1.6
IPR006501	Pectinesterase inhibitor domain	unknown	SSF101148	Plant invertase/pectin methylesterase inhibitor	coord: 29..176 score: 1.12
None	No IPR available	PANTHER	PTHR31080	FAMILY NOT NAMED	coord: 5..177 score: 7.4
None	No IPR available	PANTHER	PTHR31080:SF18	CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1-RELATED	coord: 5..177 score: 7.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0009058	biosynthetic process
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17000	0.79	Barchart \| Table
Spo04881	0.74	Barchart \| Table
Spo23035	0.73	Barchart \| Table
Spo14923	0.71	Barchart \| Table
Spo13645	0.70	Barchart \| Table
Spo15308	0.70	Barchart \| Table
Spo01316	0.69	Barchart \| Table
Spo21544	0.69	Barchart \| Table
Spo03335	0.69	Barchart \| Table
Spo25262	0.68	Barchart \| Table
Spo21191	0.68	Barchart \| Table
Spo04256	0.68	Barchart \| Table
Spo11549	0.67	Barchart \| Table
Spo05013	0.67	Barchart \| Table
Spo11303	0.67	Barchart \| Table
Spo19442	0.66	Barchart \| Table
Spo08467	0.66	Barchart \| Table
Spo06774	0.66	Barchart \| Table
Spo00660	0.65	Barchart \| Table
Spo09378	0.65	Barchart \| Table