Spo01202 (gene) | SpinachBase

Overview


Name	Spo01202
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	E3 ubiquitin-protein ligase (6.3.2.-)
Location	chr2 : 58382740 .. 58387032 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCACACTTGTAGTCAATAAAAATAAGGTGAAGGAGGGACAAGAACTAATTGGTGAATTCCACATCGTCAAAAATGGTATTGGGACAAGAACTGAACAGGCCCAAAGAGGCCCATAAAGAAAAGCACCTGGGGATATGGAAGGATGGTAGTTTTTAGCAAAAAAAATGGGGATTTGGGGATTCCTTTTTTCTCTCTCCTTCTTTCCAAAAACCATCCACTCCGACTCTTTGAGTACAAGAGCTGAAGATGGAGGGAGGTAGAGGTTTCAAATCAAACCCAGAAATCAAATAAATTACTTAATGTGAGTTTTTTGTTGAAGTGGGTAAAAAAAAAAGAGGGTTGTGATCTGGGAAATTGGGTGTTTGTAAAAAATGGATATTGATAGCATAGAGTGTGTATCATCCATAGATATGGATGAAGATGAGATTATACAACAATATCACCACCCTTTTTCATCATCAAAAGCTCCACACAATCACATCATCAACAATGGCGTCCTTAATCCCACCATTCACCCAGCTACTAGTGTTCATGAGCTTCTTGAGTGTCCTGTTTGTACCAATTCTATGTATCCTCCTATTCACCAGGTTCTATTTTTGTCCTTCTAAATTTCTGGACTTTGTTGCCCATGTATTTTCCTGTCTGGATTTGTTTGATTTTGTGGATTTATTGGTTGTTTGGTAGTACTGTCTGAATTTTGACAAAGGGTTGAATTTGCTACAAAATTGTAGTTATTGATTTGTAGGGTTTTGATTCTATTTACTCTAGAGGATCTAATCATGAGAATTTATGACATGGTTTCTGAAGTTGTTGTTAATTTTAAGGAAATTGCTGAATTTGGTGCAGTTTATAATGTTCTTTGACCTGAATGTTGAACATCAATGTATTTATCTGTCTAGTTGGATGAAGGAAATGGTCAAGAAGGTCGGATTAGGGGTGAAGTTTGGGGCATGGGATTATCGCCTTTTGTGAAGATATCATTGTTTTTTTTTTCCTGAAACAGTCTTTCTATATTATTGAATCATTGATTGGTTAGAGGCAAGAGCCAAGAGGTAAGCTACTCCCTCTTTACTTCCCTAGATCCCTGGAACAGAAAGACTGATATTGGAGACCTTGTATTTGCTATGATACCGCTTTCTAATTTTGGAGACAGTGTTAGTTAATACATGTGGTTTAGATTTTGGATTTTGTCTTTAAAGTGGCAATGTGGGAAGGAGAGTATGGGGGTATTATGAAGAATCAGTGGTATGTGTAAAATAAATATCGATGGGAAGAGCGAGAAAAAAGCCTTGTTGTGTATAGTTGCTGGACTAGTTGTTCAGTAATGGCCATGAGATAGTAGCTTCCTATAATAGACTACACAATGCCTAGTATATCCTGGAGAGTGCAGACTATCAGATGGGGGAAAATTTTGGTACTATTGAAGGACCTGAATGGTCCTTGTGAAGTTCTGGAATTTCTCAAACTTCAGAAGGTTTAGACTTTTAGATGCAGTTAGAAATTTATAAGCTCAAAGAGTCAAAGGTATGAGTTTCTCACATGATTAAAGGAATGGTAGAATACAGTGAAATTCATACCACCAAATCATAGGAATACCCAGAAACATATAATACAAACTCTTTGTATAGGACTCCACAATGAAACAATTCAATTGATCAAGATGTACACCAGTAGGCAAACAGTAAATCTTATTCCATAGTCTAATTATTACGCCGAGTGAGCTTTTCAGGGCTAAGGCGAGGTGTGAAAGAAAACAAGAGAAGGTTACTTCTAGTGGACTAATTCTTTTAGTAAGGCATGGAGTTAGACATATGGGCTGCTTCTTTAGGCCCCCTTTCATGGAATTAGTTCTTGTAATTGCGCAGATCTGGAGTATAGATGTGTGTGACTGTAGTATTTCACCAACTTGATCATAAATTTGGCAGGCCATTTACTTACTGTTCATGATCTGAATTTGTAGGACAAGTCTATTACTTTATATTCTCTCTGATCCCCTACTCGTCTTTTATTTGGAATATGCCCTTCTGTTGGTTTAAATAATTCATTTGACCAAAATGTGGCCCTAATTTTCCGAGCAGAGTTGGAACCTTGATCTTTGTGGCTGTAGTTTATCTGTGTTAATAATTGGTGTAATATGTCAAGGGTTATCCGTCTATTTTCCCTCCACACCACCCATGTCACAAGGGAAGAATGTCACCCATTCACTCTCATGCTATTCACTGTAAAAAAATTGTGCTTCCCCTTGCTAATCCAGCTGTTTGAGAAACACAGCAATTATGCTGTTGTATGTTATTCTCATATAGATATTGGGAATTTTGTTGTGTTTACCTTGGTGATAAATATCTTTTCTTCTGAAATCTAGCATATGTTAAGATATCATGAATTTTCTAACATTATGATTTCTACAGTGCCGAAATGGGCATACACTTTGTTCCACCTGTAAAACACGTGTACAAAATCGATGCCCCACCTGTCGTCAGGAACTTGGGGATATAAGATGTCTAGCATTGGAAAAAGTTGCTGAATCACTTGAGCTTCCTTGCAAATACTATTCATTTGGTTGCCCAGAGATCTTTCCCTACTACAGCAAAGTTAAACATGAAGCCATATGTAACTTCAGGCCGTACAATTGTCCATATGCTGGATCCGAGTGTTCTGCCTCCGGGGATATACCTTATCTCGTGACTCACTTGAGGGATGATCACAAGGTCGACATGCATTCTGGATGTACATTTAATCATCGTTACGTGAAGTCTAATCCACGTGAGGTGGAAAATGCTACATGGATGCTAACTGTAAGTTCATTTACCCTACCATTAGCATATACATATTGACATAAGCATCCGCATTGACCAGTAATTTCATTTGCTTTTCATAAGTATTGTTTGGTATCAAGGTTACCAAATCGGGATTCTACTTTGAATCGGAAAGGACTCTTAGAATCGAATCGTGAAATCAACTAAGATTTTACGAACAAGTATGATCCATATTTTATTTTTAAATTTCATTGAAAATGCTCATACTTCCTCCGTTCCGTAAATATCGCACCATCTTGTTTTTTACACTATTCACACTAGACTTTTTGATCATCTTTTGTGATTCATACCTAAGAAAGATTGTACTCATGTAAGATCTTGTTATATTCGTATCGGTATATATTTTCTAAATATCAACTTTTTATAATTTTAACTTATGCATAATTCGAGACATTAAGAGTCAAAGTGTGTCTTGAAAAAACTAAAAGTCAACCATGGTGCAATGTTTAAGGAACGGATGAAGTATTATTATAGTAGGTGAGAAGGTTAATAATTGAAATATAGTTGTTTACTAGCTAAAAAGCAATAATTAACAACATTTATCCATCAATAACTTTCCTAGCGTGATTCAAATCATGAGGTTTTCGCTAGTCAAGAAAAAAGTGTAGAATCGTAAGACAATATTACGGTTCTACGATTTGAATCGCGATTTTAATAACCATGCTTGTTATACAATATAAATATCAATTTTCTTATTCCCTTTCCTAGGTTTTCCACTGTTTTGGTCAATATTTCTGCCTCCATTTCGAAGCATTTCAACTTGGCATGGCACCTGTATATATGGCGTTCCTTCGGTTCATGGGGGATGAGATGGAAGCTAGGAATTATAGCTACAGCCTTGAAGTCGGGGGTTATGGCCGAAAACTGACGTGGGAGGGAACCCCTAGAAGTGTAAGAGACAGCCATAGAAAAGTAAGGGACAGTCATGATGGTCTTATAATACAGAGAAACATGGCACTCTTCTTTTCCGGAGGAGACCGCAAGGAACTCAAGTTGCGGGTAACTGGACGCATATGGAAGGAACAGCAGAACCCGGATGGTGGAGCCTGCATTCCAAATCTGTGCAGCTAATAGTTGGTTCCAAATCCAGTCTTCTGTTTGGGATAATTGTAATTTGGTTAACAAAGTATATAGACGTGTTGTGTAATCACTTGTATGGAATGTGTGTATGTTAATTAGATGTAGCTGCTGTTTCGTAAGATTGTTTTAACTAATTCAACTTTCGCCGTTGAAAATGGCTAATAATTTTCAGTACTTTTGTTTCCCCCTTCGTGACTTGTTAGATTATGTTGTCAACTGCTTCAGATTTCCAGCTTCAAAGTTGTGTCTGAATCGTCTACGAACTAATATCTCCTTGTTAGCACTCCGTAATAAGGTTCTCTTGGCGTGTTGTATGTGTATATCAATGATTTCTATACGTAATTATGTTTAACAAATTACTCACAAATGCAATAACACATTTCTCTTTAAATGGC

mRNA sequence

TGTCACACTTGTAGTCAATAAAAATAAGGTGAAGGAGGGACAAGAACTAATTGGTGAATTCCACATCGTCAAAAATGGTATTGGGACAAGAACTGAACAGGCCCAAAGAGGCCCATAAAGAAAAGCACCTGGGGATATGGAAGGATGGTAGTTTTTAGCAAAAAAAATGGGGATTTGGGGATTCCTTTTTTCTCTCTCCTTCTTTCCAAAAACCATCCACTCCGACTCTTTGAGTACAAGAGCTGAAGATGGAGGGAGGTAGAGGTTTCAAATCAAACCCAGAAATCAAATAAATTACTTAATGTGAGTTTTTTGTTGAAGTGGGTAAAAAAAAAAGAGGGTTGTGATCTGGGAAATTGGGTGTTTGTAAAAAATGGATATTGATAGCATAGAGTGTGTATCATCCATAGATATGGATGAAGATGAGATTATACAACAATATCACCACCCTTTTTCATCATCAAAAGCTCCACACAATCACATCATCAACAATGGCGTCCTTAATCCCACCATTCACCCAGCTACTAGTGTTCATGAGCTTCTTGAGTGTCCTGTTTGTACCAATTCTATGTATCCTCCTATTCACCAGTGCCGAAATGGGCATACACTTTGTTCCACCTGTAAAACACGTGTACAAAATCGATGCCCCACCTGTCGTCAGGAACTTGGGGATATAAGATGTCTAGCATTGGAAAAAGTTGCTGAATCACTTGAGCTTCCTTGCAAATACTATTCATTTGGTTGCCCAGAGATCTTTCCCTACTACAGCAAAGTTAAACATGAAGCCATATGTAACTTCAGGCCGTACAATTGTCCATATGCTGGATCCGAGTGTTCTGCCTCCGGGGATATACCTTATCTCGTGACTCACTTGAGGGATGATCACAAGGTCGACATGCATTCTGGATGTACATTTAATCATCGTTACGTGAAGTCTAATCCACGTGAGGTGGAAAATGCTACATGGATGCTAACTGTTTTCCACTGTTTTGGTCAATATTTCTGCCTCCATTTCGAAGCATTTCAACTTGGCATGGCACCTGTATATATGGCGTTCCTTCGGTTCATGGGGGATGAGATGGAAGCTAGGAATTATAGCTACAGCCTTGAAGTCGGGGGTTATGGCCGAAAACTGACGTGGGAGGGAACCCCTAGAAGTGTAAGAGACAGCCATAGAAAAGTAAGGGACAGTCATGATGGTCTTATAATACAGAGAAACATGGCACTCTTCTTTTCCGGAGGAGACCGCAAGGAACTCAAGTTGCGGGTAACTGGACGCATATGGAAGGAACAGCAGAACCCGGATGGTGGAGCCTGCATTCCAAATCTGTGCAGCTAATAGTTGGTTCCAAATCCAGTCTTCTGTTTGGGATAATTGTAATTTGGTTAACAAAGTATATAGACGTGTTGTGTAATCACTTGTATGGAATGTGTGTATGTTAATTAGATGTAGCTGCTGTTTCGTAAGATTGTTTTAACTAATTCAACTTTCGCCGTTGAAAATGGCTAATAATTTTCAGTACTTTTGTTTCCCCCTTCGTGACTTGTTAGATTATGTTGTCAACTGCTTCAGATTTCCAGCTTCAAAGTTGTGTCTGAATCGTCTACGAACTAATATCTCCTTGTTAGCACTCCGTAATAAGGTTCTCTTGGCGTGTTGTATGTGTATATCAATGATTTCTATACGTAATTATGTTTAACAAATTACTCACAAATGCAATAACACATTTCTCTTTAAATGGC

Coding sequence (CDS)

ATGGATATTGATAGCATAGAGTGTGTATCATCCATAGATATGGATGAAGATGAGATTATACAACAATATCACCACCCTTTTTCATCATCAAAAGCTCCACACAATCACATCATCAACAATGGCGTCCTTAATCCCACCATTCACCCAGCTACTAGTGTTCATGAGCTTCTTGAGTGTCCTGTTTGTACCAATTCTATGTATCCTCCTATTCACCAGTGCCGAAATGGGCATACACTTTGTTCCACCTGTAAAACACGTGTACAAAATCGATGCCCCACCTGTCGTCAGGAACTTGGGGATATAAGATGTCTAGCATTGGAAAAAGTTGCTGAATCACTTGAGCTTCCTTGCAAATACTATTCATTTGGTTGCCCAGAGATCTTTCCCTACTACAGCAAAGTTAAACATGAAGCCATATGTAACTTCAGGCCGTACAATTGTCCATATGCTGGATCCGAGTGTTCTGCCTCCGGGGATATACCTTATCTCGTGACTCACTTGAGGGATGATCACAAGGTCGACATGCATTCTGGATGTACATTTAATCATCGTTACGTGAAGTCTAATCCACGTGAGGTGGAAAATGCTACATGGATGCTAACTGTTTTCCACTGTTTTGGTCAATATTTCTGCCTCCATTTCGAAGCATTTCAACTTGGCATGGCACCTGTATATATGGCGTTCCTTCGGTTCATGGGGGATGAGATGGAAGCTAGGAATTATAGCTACAGCCTTGAAGTCGGGGGTTATGGCCGAAAACTGACGTGGGAGGGAACCCCTAGAAGTGTAAGAGACAGCCATAGAAAAGTAAGGGACAGTCATGATGGTCTTATAATACAGAGAAACATGGCACTCTTCTTTTCCGGAGGAGACCGCAAGGAACTCAAGTTGCGGGTAACTGGACGCATATGGAAGGAACAGCAGAACCCGGATGGTGGAGCCTGCATTCCAAATCTGTGCAGCTAA

Protein sequence

MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDGGACIPNLCS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo01202.1	Spo01202.1	mRNA

Homology

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BLAST of Spo01202.1 vs. NCBI nr
Match: gi|902218854|gb|KNA18159.1| (hypothetical protein SOVF_073390 [Spinacia oleracea])

HSP 1 Score: 694.1 bits (1790), Expect = 1.100e-196
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHELLECP 60
           MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHELLECP
Sbjct: 1   MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHELLECP 60

Query: 61  VCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYY 120
           VCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYY
Sbjct: 61  VCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYY 120

Query: 121 SFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSGCT 180
           SFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSGCT
Sbjct: 121 SFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSGCT 180

Query: 181 FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARN 240
           FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARN
Sbjct: 181 FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARN 240

Query: 241 YSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT 300
           YSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
Sbjct: 241 YSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT 300

Query: 301 GRIWKEQQNPDGGACIPNLCS 322
           GRIWKEQQNPDGGACIPNLCS
Sbjct: 301 GRIWKEQQNPDGGACIPNLCS 321

[Close]

BLAST of Spo01202.1 vs. NCBI nr
Match: gi|731311271|ref|XP_010665998.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 648.7 bits (1672), Expect = 5.500e-183
Identity = 303/325 (93.23%), Postives = 311/325 (95.69%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSIDMDEDEIIQ----QYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHEL 60
           MDID+IECVS+IDMDEDEII     Q HH FSSSKAPHN   NNGVLN +IHPATSVHEL
Sbjct: 1   MDIDNIECVSTIDMDEDEIIHHHHHQNHHQFSSSKAPHN---NNGVLNSSIHPATSVHEL 60

Query: 61  LECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELP 120
           LECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELP
Sbjct: 61  LECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELP 120

Query: 121 CKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMH 180
           CKYY+ GCPEIFPYYSK+KHEA+CNFRPYNCPYAGSECSA+GDIP LV HLRDDHKVDMH
Sbjct: 121 CKYYTLGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECSATGDIPSLVAHLRDDHKVDMH 180

Query: 181 SGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEM 240
           SGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEM
Sbjct: 181 SGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEM 240

Query: 241 EARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELK 300
           +ARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELK
Sbjct: 241 DARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELK 300

Query: 301 LRVTGRIWKEQQNPDGGACIPNLCS 322
           LRVTGRIWKEQQNPDGGACIPNLCS
Sbjct: 301 LRVTGRIWKEQQNPDGGACIPNLCS 322

[Close]

BLAST of Spo01202.1 vs. NCBI nr
Match: gi|502136338|ref|XP_004502650.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Cicer arietinum])

HSP 1 Score: 602.8 bits (1553), Expect = 3.400e-169
Identity = 283/323 (87.62%), Postives = 295/323 (91.33%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSID-MDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPT-IHPATSVHELLE 60
           M++D+IECVSS D MDEDEI Q +H  FSS+K  +    NN +L PT I PATSVHELLE
Sbjct: 1   MELDNIECVSSSDGMDEDEIHQHHHSEFSSTKHRNGANNNNNILGPTAIAPATSVHELLE 60

Query: 61  CPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCK 120
           CPVCTNSMYPPIHQC NGHTLCSTCKTRV NRCPTCRQELGDIRCLALEKVAESLELPCK
Sbjct: 61  CPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCK 120

Query: 121 YYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSG 180
           YYS GCPEIFPYYSK+KHE +CNFRPY+CPYAGSECS  GDI +LVTHLRDDHKVDMH+G
Sbjct: 121 YYSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVVGDISFLVTHLRDDHKVDMHTG 180

Query: 181 CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEA 240
           CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE EA
Sbjct: 181 CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEA 240

Query: 241 RNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR 300
           RNYSYSLEVGG GRKL WEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR
Sbjct: 241 RNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR 300

Query: 301 VTGRIWKEQQNPDGGACIPNLCS 322
           VTGRIWKEQQNPD G CIPNLCS
Sbjct: 301 VTGRIWKEQQNPDAGVCIPNLCS 323

[Close]

BLAST of Spo01202.1 vs. NCBI nr
Match: gi|379055945|emb|CCG06554.1| (E3 ubiquitin ligase [Lotus japonicus])

HSP 1 Score: 598.2 bits (1541), Expect = 8.500e-168
Identity = 284/324 (87.65%), Postives = 293/324 (90.43%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSID-MDEDEIIQQYHHPFSSSKAPHNH-IINNGVLNPT-IHPATSVHELL 60
           MD+DSIECVSS D MDEDEI   +H  FSS+KA +     NN  + PT I PATSVHELL
Sbjct: 1   MDLDSIECVSSSDGMDEDEIHAHHHSEFSSTKARNGGGNNNNAAMGPTAITPATSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPC 120
           ECPVCTNSMYPPIHQC NGHTLCSTCKTRV NRCPTCRQELGDIRCLALEKVAESLELPC
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHS 180
           KYYS GCPEIFPYYSK+KHE ICNFRPY+CPYAGSECS  GDIP+LV HLRDDHKVDMH+
Sbjct: 121 KYYSLGCPEIFPYYSKLKHETICNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHT 180

Query: 181 GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEME 240
           GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE E
Sbjct: 181 GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENE 240

Query: 241 ARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKL 300
           ARNYSYSLEVG  GRKL WEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKL
Sbjct: 241 ARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RVTGRIWKEQQNPDGGACIPNLCS 322
           RVTGRIWKEQQNPD G CIPNLCS
Sbjct: 301 RVTGRIWKEQQNPDAGVCIPNLCS 324

[Close]

BLAST of Spo01202.1 vs. NCBI nr
Match: gi|1021532706|ref|XP_016163323.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Arachis ipaensis])

HSP 1 Score: 597.0 bits (1538), Expect = 1.900e-167
Identity = 280/323 (86.69%), Postives = 291/323 (90.09%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSID-MDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPT-IHPATSVHELLE 60
           MD++SIECVSS D MDEDEI   +H  F S+K  +    NN  + P  I PATSVHELLE
Sbjct: 1   MDLESIECVSSSDGMDEDEIHPHHHSEFPSTKPRNGGANNNNSVGPNAITPATSVHELLE 60

Query: 61  CPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCK 120
           CPVCTNSMYPPIHQC NGHTLCSTCKTRV NRCPTCRQELGDIRCLALEKVAESLELPCK
Sbjct: 61  CPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCK 120

Query: 121 YYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSG 180
           YYS GCPEIFPYYSK+KHE +CNFRPY+CPYAGSECS  GDIP+LV HLRDDHKVDMH+G
Sbjct: 121 YYSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTG 180

Query: 181 CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEA 240
           CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE EA
Sbjct: 181 CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEA 240

Query: 241 RNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR 300
           RNYSYSLEVG  GRKL WEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR
Sbjct: 241 RNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR 300

Query: 301 VTGRIWKEQQNPDGGACIPNLCS 322
           VTGRIWKEQQNPDGG CIPNLCS
Sbjct: 301 VTGRIWKEQQNPDGGVCIPNLCS 323

[Close]

BLAST of Spo01202.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RGS5_SPIOL (E3 ubiquitin-protein ligase OS=Spinacia oleracea GN=SOVF_073390 PE=3 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 7.900e-197
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHELLECP 60
           MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHELLECP
Sbjct: 1   MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHELLECP 60

Query: 61  VCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYY 120
           VCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYY
Sbjct: 61  VCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYY 120

Query: 121 SFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSGCT 180
           SFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSGCT
Sbjct: 121 SFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSGCT 180

Query: 181 FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARN 240
           FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARN
Sbjct: 181 FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARN 240

Query: 241 YSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT 300
           YSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
Sbjct: 241 YSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT 300

Query: 301 GRIWKEQQNPDGGACIPNLCS 322
           GRIWKEQQNPDGGACIPNLCS
Sbjct: 301 GRIWKEQQNPDGGACIPNLCS 321

[Close]

BLAST of Spo01202.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D3D6_BETVU (E3 ubiquitin-protein ligase OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g003000 PE=3 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 3.800e-183
Identity = 303/325 (93.23%), Postives = 311/325 (95.69%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSIDMDEDEIIQ----QYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHEL 60
           MDID+IECVS+IDMDEDEII     Q HH FSSSKAPHN   NNGVLN +IHPATSVHEL
Sbjct: 1   MDIDNIECVSTIDMDEDEIIHHHHHQNHHQFSSSKAPHN---NNGVLNSSIHPATSVHEL 60

Query: 61  LECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELP 120
           LECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELP
Sbjct: 61  LECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELP 120

Query: 121 CKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMH 180
           CKYY+ GCPEIFPYYSK+KHEA+CNFRPYNCPYAGSECSA+GDIP LV HLRDDHKVDMH
Sbjct: 121 CKYYTLGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECSATGDIPSLVAHLRDDHKVDMH 180

Query: 181 SGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEM 240
           SGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEM
Sbjct: 181 SGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEM 240

Query: 241 EARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELK 300
           +ARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELK
Sbjct: 241 DARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELK 300

Query: 301 LRVTGRIWKEQQNPDGGACIPNLCS 322
           LRVTGRIWKEQQNPDGGACIPNLCS
Sbjct: 301 LRVTGRIWKEQQNPDGGACIPNLCS 322

[Close]

BLAST of Spo01202.1 vs. UniProtKB/TrEMBL
Match: H8WVC6_LOTJA (E3 ubiquitin-protein ligase OS=Lotus japonicus GN=SINA4 PE=2 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 5.900e-168
Identity = 284/324 (87.65%), Postives = 293/324 (90.43%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSID-MDEDEIIQQYHHPFSSSKAPHNH-IINNGVLNPT-IHPATSVHELL 60
           MD+DSIECVSS D MDEDEI   +H  FSS+KA +     NN  + PT I PATSVHELL
Sbjct: 1   MDLDSIECVSSSDGMDEDEIHAHHHSEFSSTKARNGGGNNNNAAMGPTAITPATSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPC 120
           ECPVCTNSMYPPIHQC NGHTLCSTCKTRV NRCPTCRQELGDIRCLALEKVAESLELPC
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHS 180
           KYYS GCPEIFPYYSK+KHE ICNFRPY+CPYAGSECS  GDIP+LV HLRDDHKVDMH+
Sbjct: 121 KYYSLGCPEIFPYYSKLKHETICNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHT 180

Query: 181 GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEME 240
           GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE E
Sbjct: 181 GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENE 240

Query: 241 ARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKL 300
           ARNYSYSLEVG  GRKL WEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKL
Sbjct: 241 ARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RVTGRIWKEQQNPDGGACIPNLCS 322
           RVTGRIWKEQQNPD G CIPNLCS
Sbjct: 301 RVTGRIWKEQQNPDAGVCIPNLCS 324

[Close]

BLAST of Spo01202.1 vs. UniProtKB/TrEMBL
Match: A0A061G1U5_THECC (E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_015414 PE=3 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 2.900e-167
Identity = 286/339 (84.37%), Postives = 298/339 (87.91%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSID-MDEDEIIQ---------QYHHPFSSSKAPHNHIIN-------NGVL 60
           M++DSIECVSS D MDEDEI           Q HH FSSSK PHN   N       N ++
Sbjct: 1   MELDSIECVSSTDGMDEDEIHHHNLHHPHPHQGHHQFSSSK-PHNGTNNTANANSINNIV 60

Query: 61  NPT-IHPATSVHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIR 120
            PT I PATSVHELLECPVCTNSMYPPIHQC NGHTLCSTCKTRV NRCPTCRQELGDIR
Sbjct: 61  GPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIR 120

Query: 121 CLALEKVAESLELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPY 180
           CLALEKVAESLELPCKYY+ GCPEIFPYYSK+KHEAICN+RPY+CPYAGSECS  GDIP+
Sbjct: 121 CLALEKVAESLELPCKYYNLGCPEIFPYYSKLKHEAICNYRPYSCPYAGSECSVVGDIPF 180

Query: 181 LVTHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA 240
           LV HLRDDHKVDMH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA
Sbjct: 181 LVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA 240

Query: 241 PVYMAFLRFMGDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRN 300
           PVYMAFLRFMGDE+EARNYSYSLEVG  GRKL WEGTPRS+RDSHRKVRDSHDGLIIQRN
Sbjct: 241 PVYMAFLRFMGDEIEARNYSYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRN 300

Query: 301 MALFFSGGDRKELKLRVTGRIWKEQQNPDGGACIPNLCS 322
           MALFFSGGDRKELKLRVTGRIWKEQQNPD G CIPNLCS
Sbjct: 301 MALFFSGGDRKELKLRVTGRIWKEQQNPDAGVCIPNLCS 338

[Close]

BLAST of Spo01202.1 vs. UniProtKB/TrEMBL
Match: W9RLM0_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_006812 PE=3 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 5.000e-167
Identity = 283/339 (83.48%), Postives = 297/339 (87.61%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSID-MDEDEIIQ----------------QYHHPFSSSKAPHNHIINNGVL 60
           MD++SIECVSS D +DED+I Q                Q+H  FSSSK+  N   N+ + 
Sbjct: 1   MDLESIECVSSSDGLDEDDIHQHHNTLHPHPHPHPHPHQHHSDFSSSKSRSNATSNSTIT 60

Query: 61  NPT-IHPATSVHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIR 120
            PT I PATSVHELLECPVCTNSMYPPIHQC NGHTLCSTCKTRV NRCPTCRQELGDIR
Sbjct: 61  GPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIR 120

Query: 121 CLALEKVAESLELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPY 180
           CLALEKVAESLELPCKYY+ GCPEIFPYYSK+KHE++CNFRPYNCPYAGSECS  GDIP+
Sbjct: 121 CLALEKVAESLELPCKYYNLGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSHVGDIPF 180

Query: 181 LVTHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA 240
           LV HLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA
Sbjct: 181 LVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA 240

Query: 241 PVYMAFLRFMGDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRN 300
           PVYMAFLRFMGDE EARNYSYSLEVGG GRKL WEGTPRS+RDSHRKVRDSHDGLIIQRN
Sbjct: 241 PVYMAFLRFMGDENEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRN 300

Query: 301 MALFFSGGDRKELKLRVTGRIWKEQQNPDGGACIPNLCS 322
           MALFFSGGDRKELKLRVTGRIWKEQQNPD G CIPNLCS
Sbjct: 301 MALFFSGGDRKELKLRVTGRIWKEQQNPDTGVCIPNLCS 339

[Close]

BLAST of Spo01202.1 vs. ExPASy Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 5.900e-161
Identity = 266/326 (81.60%), Postives = 286/326 (87.73%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINN-----GVLNPTIHPATSVHE 60
           MD+DS++C S++D+ +DE I Q  H ++S  + H+H  NN        +  +   TSVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRHSYASV-SKHHHTNNNTTNVNAAASGLLPTTTSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLEL 120
           LLECPVCTNSMYPPIHQC NGHTLCSTCK RV NRCPTCRQELGDIRCLALEKVAESLEL
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 PCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDM 180
           PCK+ S GCPEIFPYYSK+KHE +CNFRPY+CPYAGSECS +GDIP+LV HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 MEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300
            EARNY+YSLEVGGYGRKL WEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRVTGRIWKEQQ--NPDGGACIPNL 320
           KLRVTGRIWKEQQ     GGACIPNL
Sbjct: 301 KLRVTGRIWKEQQQSGEGGGACIPNL 325

[Close]

BLAST of Spo01202.1 vs. ExPASy Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 549.3 bits (1414), Expect = 2.800e-155
Identity = 260/321 (81.00%), Postives = 281/321 (87.54%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINNGVLNPTIHPATSVHELLECP 60
           M+ DSI+ V    +D+DEI Q+  H FSS+K+        G     I PATSV+ELLECP
Sbjct: 1   METDSIDSV----IDDDEIHQK--HQFSSTKS-------QGGATVVISPATSVYELLECP 60

Query: 61  VCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYY 120
           VCTNSMYPPIHQC NGHTLCSTCK+RV NRCPTCRQELGDIRCLALEKVAESLELPCKYY
Sbjct: 61  VCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY 120

Query: 121 SFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDMHSGCT 180
           + GC  IFPYYSK+KHE+ CNFRPY+CPYAGSEC+A GDI +LV HLRDDHKVDMH+GCT
Sbjct: 121 NLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCT 180

Query: 181 FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARN 240
           FNHRYVKSNPREVENATWMLTVF CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE +ARN
Sbjct: 181 FNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARN 240

Query: 241 YSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT 300
           Y+YSLEVGG GRK TWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGD+KELKLRVT
Sbjct: 241 YTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVT 300

Query: 301 GRIWKEQQNPDGGACIPNLCS 322
           GRIWKEQQNPD G CI ++CS
Sbjct: 301 GRIWKEQQNPDSGVCITSMCS 308

[Close]

BLAST of Spo01202.1 vs. ExPASy Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 5.000e-152
Identity = 258/329 (78.42%), Postives = 281/329 (85.41%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSIDMDEDEIIQQYH----HPFSSSK----APHNHIINNGVLNPTIHPATS 60
           M+ DS+ECVSS     +EI Q  +    + FSS+K    A    ++ N V      PATS
Sbjct: 1   METDSMECVSSTG---NEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATS 60

Query: 61  VHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAES 120
           V+ELLECPVCT SMYPPIHQC NGHTLCSTCK RV NRCPTCRQELGDIRCLALEKVAES
Sbjct: 61  VYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAES 120

Query: 121 LELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHK 180
           LELPCK+Y+ GCPEIFPYYSK+KHE++CNFRPY+CPYAGSEC   GDIP+LV HLRDDHK
Sbjct: 121 LELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHK 180

Query: 181 VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 240
           VDMH+G TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFM
Sbjct: 181 VDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFM 240

Query: 241 GDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDR 300
           GDE +AR+YSYSLEVGG GRKLTWEGTPRS+RDSHRKVRDS+DGLIIQRNMALFFSGGDR
Sbjct: 241 GDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDR 300

Query: 301 KELKLRVTGRIWKEQQNPDGGACIPNLCS 322
           KELKLRVTG+IWKEQ +PD G  IPNL S
Sbjct: 301 KELKLRVTGKIWKEQHSPDSGLSIPNLSS 326

[Close]

BLAST of Spo01202.1 vs. ExPASy Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 4.400e-132
Identity = 212/261 (81.23%), Postives = 232/261 (88.89%), Query Frame = 1


		  
Query: 47  IHPATSVHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLAL 106
           IH    V+ELLECPVCTN MYPPIHQC NGHTLCS CK RVQN CPTCR ELG+IRCLAL
Sbjct: 48  IHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLAL 107

Query: 107 EKVAESLELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTH 166
           EKVAESLE+PC+Y + GC +IFPYYSK+KHE  C FRPY CPYAGSECS +GDIP LV H
Sbjct: 108 EKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVH 167

Query: 167 LRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 226
           L+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYM
Sbjct: 168 LKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYM 227

Query: 227 AFLRFMGDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALF 286
           AFLRFMGDE EA+ +SYSLEVG +GRKLTW+G PRS+RDSHRKVRDS DGLII RN+AL+
Sbjct: 228 AFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALY 287

Query: 287 FSGGDRKELKLRVTGRIWKEQ 308
           FSGGDR+ELKLRVTGRIWKE+
Sbjct: 288 FSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of Spo01202.1 vs. ExPASy Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=3 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 1.600e-129
Identity = 207/260 (79.62%), Postives = 231/260 (88.85%), Query Frame = 1


		  
Query: 48  HPATSVHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALE 107
           H +  V+ELLECPVCTN MYPPIHQC NGHTLCS+CK RVQN CPTCR ELG+IRCLALE
Sbjct: 46  HSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALE 105

Query: 108 KVAESLELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHL 167
           KVAESLE+PC+Y + GC +IFPYYSK+KHE  C FR Y+CPYAGSECS +GDIP LV HL
Sbjct: 106 KVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHL 165

Query: 168 RDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA 227
           +DDHKVDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMA
Sbjct: 166 KDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMA 225

Query: 228 FLRFMGDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFF 287
           FLRFMGDE EA+ +SYSLEVG + RKLTW+G PRS+RDSHRKVRDS DGLII RN+AL+F
Sbjct: 226 FLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYF 285

Query: 288 SGGDRKELKLRVTGRIWKEQ 308
           SG D++ELKLRVTGRIWKE+
Sbjct: 286 SGSDKEELKLRVTGRIWKEE 305

[Close]

BLAST of Spo01202.1 vs. TAIR (Arabidopsis)
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 568.2 bits (1463), Expect = 3.300e-162
Identity = 266/326 (81.60%), Postives = 286/326 (87.73%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSIDMDEDEIIQQYHHPFSSSKAPHNHIINN-----GVLNPTIHPATSVHE 60
           MD+DS++C S++D+ +DE I Q  H ++S  + H+H  NN        +  +   TSVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRHSYASV-SKHHHTNNNTTNVNAAASGLLPTTTSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLEL 120
           LLECPVCTNSMYPPIHQC NGHTLCSTCK RV NRCPTCRQELGDIRCLALEKVAESLEL
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 PCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHKVDM 180
           PCK+ S GCPEIFPYYSK+KHE +CNFRPY+CPYAGSECS +GDIP+LV HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 MEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300
            EARNY+YSLEVGGYGRKL WEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRVTGRIWKEQQ--NPDGGACIPNL 320
           KLRVTGRIWKEQQ     GGACIPNL
Sbjct: 301 KLRVTGRIWKEQQQSGEGGGACIPNL 325

[Close]

BLAST of Spo01202.1 vs. TAIR (Arabidopsis)
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 538.5 bits (1386), Expect = 2.800e-153
Identity = 258/329 (78.42%), Postives = 281/329 (85.41%), Query Frame = 1


		  
Query: 1   MDIDSIECVSSIDMDEDEIIQQYH----HPFSSSK----APHNHIINNGVLNPTIHPATS 60
           M+ DS+ECVSS     +EI Q  +    + FSS+K    A    ++ N V      PATS
Sbjct: 1   METDSMECVSSTG---NEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATS 60

Query: 61  VHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAES 120
           V+ELLECPVCT SMYPPIHQC NGHTLCSTCK RV NRCPTCRQELGDIRCLALEKVAES
Sbjct: 61  VYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAES 120

Query: 121 LELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHLRDDHK 180
           LELPCK+Y+ GCPEIFPYYSK+KHE++CNFRPY+CPYAGSEC   GDIP+LV HLRDDHK
Sbjct: 121 LELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHK 180

Query: 181 VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 240
           VDMH+G TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFM
Sbjct: 181 VDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFM 240

Query: 241 GDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDR 300
           GDE +AR+YSYSLEVGG GRKLTWEGTPRS+RDSHRKVRDS+DGLIIQRNMALFFSGGDR
Sbjct: 241 GDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDR 300

Query: 301 KELKLRVTGRIWKEQQNPDGGACIPNLCS 322
           KELKLRVTG+IWKEQ +PD G  IPNL S
Sbjct: 301 KELKLRVTGKIWKEQHSPDSGLSIPNLSS 326

[Close]

BLAST of Spo01202.1 vs. TAIR (Arabidopsis)
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2)

HSP 1 Score: 472.2 bits (1214), Expect = 2.500e-133
Identity = 212/261 (81.23%), Postives = 232/261 (88.89%), Query Frame = 1


		  
Query: 47  IHPATSVHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLAL 106
           IH    V+ELLECPVCTN MYPPIHQC NGHTLCS CK RVQN CPTCR ELG+IRCLAL
Sbjct: 48  IHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLAL 107

Query: 107 EKVAESLELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTH 166
           EKVAESLE+PC+Y + GC +IFPYYSK+KHE  C FRPY CPYAGSECS +GDIP LV H
Sbjct: 108 EKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVH 167

Query: 167 LRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 226
           L+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYM
Sbjct: 168 LKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYM 227

Query: 227 AFLRFMGDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALF 286
           AFLRFMGDE EA+ +SYSLEVG +GRKLTW+G PRS+RDSHRKVRDS DGLII RN+AL+
Sbjct: 228 AFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALY 287

Query: 287 FSGGDRKELKLRVTGRIWKEQ 308
           FSGGDR+ELKLRVTGRIWKE+
Sbjct: 288 FSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of Spo01202.1 vs. TAIR (Arabidopsis)
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 463.8 bits (1192), Expect = 8.800e-131
Identity = 207/260 (79.62%), Postives = 231/260 (88.85%), Query Frame = 1


		  
Query: 48  HPATSVHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALE 107
           H +  V+ELLECPVCTN MYPPIHQC NGHTLCS+CK RVQN CPTCR ELG+IRCLALE
Sbjct: 46  HSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALE 105

Query: 108 KVAESLELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYLVTHL 167
           KVAESLE+PC+Y + GC +IFPYYSK+KHE  C FR Y+CPYAGSECS +GDIP LV HL
Sbjct: 106 KVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHL 165

Query: 168 RDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA 227
           +DDHKVDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMA
Sbjct: 166 KDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMA 225

Query: 228 FLRFMGDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFF 287
           FLRFMGDE EA+ +SYSLEVG + RKLTW+G PRS+RDSHRKVRDS DGLII RN+AL+F
Sbjct: 226 FLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYF 285

Query: 288 SGGDRKELKLRVTGRIWKEQ 308
           SG D++ELKLRVTGRIWKE+
Sbjct: 286 SGSDKEELKLRVTGRIWKEE 305

[Close]

BLAST of Spo01202.1 vs. TAIR (Arabidopsis)
Match: AT5G53360.1 (TRAF-like superfamily protein)

HSP 1 Score: 421.0 bits (1081), Expect = 6.500e-118
Identity = 191/218 (87.61%), Postives = 204/218 (93.58%), Query Frame = 1


		  
Query: 104 LALEKVAESLELPCKYYSFGCPEIFPYYSKVKHEAICNFRPYNCPYAGSECSASGDIPYL 163
           +ALEKVAESLELPCKYY+ GC  IFPYYSK+KHE+ CNFRPY+CPYAGSEC+A GDI +L
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 164 VTHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAP 223
           V HLRDDHKVDMH+GCTFNHRYVKSNPREVENATWMLTVF CFGQYFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 224 VYMAFLRFMGDEMEARNYSYSLEVGGYGRKLTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 283
           VYMAFLRFMGDE +ARNY+YSLEVGG GRK TWEGTPRSVRDSHRKVRDSHDGLIIQRNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 284 ALFFSGGDRKELKLRVTGRIWKEQQNPDGGACIPNLCS 322
           ALFFSGGD+KELKLRVTGRIWKEQQNPD G CI ++CS
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQQNPDSGVCITSMCS 232

The following BLAST results are available for this feature:

BLAST of Spo01202.1 vs. NCBI nr
BLAST of Spo01202.1 vs. UniProtKB/TrEMBL
BLAST of Spo01202.1 vs. ExPASy Swiss-Prot
BLAST of Spo01202.1 vs. TAIR (Arabidopsis)

BLAST of Spo01202.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902218854\|gb\|KNA18159.1\|	1.1e-196	100.	hypothetical protein SOVF_0733...	[more]
gi\|731311271\|ref\|XP_010665998.1\|	5.5e-183	93.2	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|502136338\|ref\|XP_004502650.1\|	3.4e-169	87.6	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|379055945\|emb\|CCG06554.1\|	8.5e-168	87.6	E3 ubiquitin ligase [Lotus jap...	[more]
gi\|1021532706\|ref\|XP_016163323.1\|	1.9e-167	86.6	PREDICTED: E3 ubiquitin-protei...	[more]

BLAST of Spo01202.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RGS5_SPIOL	7.9e-197	100.	E3 ubiquitin-protein ligase OS...	[more]
A0A0J8D3D6_BETVU	3.8e-183	93.2	E3 ubiquitin-protein ligase OS...	[more]
H8WVC6_LOTJA	5.9e-168	87.6	E3 ubiquitin-protein ligase OS...	[more]
A0A061G1U5_THECC	2.9e-167	84.3	E3 ubiquitin-protein ligase OS...	[more]
W9RLM0_9ROSA	5.0e-167	83.4	E3 ubiquitin-protein ligase OS...	[more]

BLAST of Spo01202.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SINA3_ARATH	5.9e-161	81.6	E3 ubiquitin-protein ligase SI...	[more]
SINA5_ARATH	2.8e-155	81.0	E3 ubiquitin-protein ligase SI...	[more]
SINA4_ARATH	5.0e-152	78.4	E3 ubiquitin-protein ligase SI...	[more]
SINA2_ARATH	4.4e-132	81.2	E3 ubiquitin-protein ligase SI...	[more]
SINA1_ARATH	1.6e-129	79.6	Putative E3 ubiquitin-protein ...	[more]

BLAST of Spo01202.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G61790.1	3.3e-162	81.6	Protein with RING/U-box and TR...	[more]
AT4G27880.1	2.8e-153	78.4	Protein with RING/U-box and TR...	[more]
AT3G58040.1	2.5e-133	81.2	seven in absentia of Arabidops...	[more]
AT2G41980.1	8.8e-131	79.6	Protein with RING/U-box and TR...	[more]
AT5G53360.1	6.5e-118	87.6	TRAF-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 59..95 score: 9
IPR004162	E3 ubiquitin-protein ligase SIN-like	PANTHER	PTHR10315	SEVEN IN ABSENTIA HOMOLOG	coord: 1..321 score: 7.2E
IPR008974	TRAF-like	GENE3D	2.60.210.10		coord: 177..304 score: 5.9
IPR008974	TRAF-like	unknown	SSF49599	TRAF domain-like	coord: 112..304 score: 2.35
IPR013010	Zinc finger, SIAH-type	PROFILE	PS51081	ZF_SIAH	coord: 112..172 score: 14
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 49..124 score: 2.5
IPR013323	SIAH-type domain	GENE3D	3.90.890.10		coord: 125..167 score: 2.2
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 101..300 score: 1.1
None	No IPR available	PANTHER	PTHR10315:SF34	E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED	coord: 1..321 score: 7.2E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 53..99 score: 1.

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0006366	transcription by RNA polymerase II
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
cellular_component	GO:0000419	DNA-directed RNA polymerase V complex
cellular_component	GO:0000418	DNA-directed RNA polymerase IV complex
cellular_component	GO:0005666	DNA-directed RNA polymerase III complex
cellular_component	GO:0005665	DNA-directed RNA polymerase II, core complex
cellular_component	GO:0005736	DNA-directed RNA polymerase I complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0001054	RNA polymerase I activity
molecular_function	GO:0001055	RNA polymerase II activity
molecular_function	GO:0001056	RNA polymerase III activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06838	0.80	Barchart \| Table
Spo18046	0.78	Barchart \| Table
Spo19839	0.74	Barchart \| Table
Spo14714	0.74	Barchart \| Table
Spo01132	0.72	Barchart \| Table
Spo13184	0.71	Barchart \| Table
Spo11339	0.70	Barchart \| Table
Spo09305	0.70	Barchart \| Table
Spo00396	0.69	Barchart \| Table
Spo24607	0.69	Barchart \| Table
Spo09180	0.68	Barchart \| Table
Spo15643	0.68	Barchart \| Table
Spo02891	0.68	Barchart \| Table
Spo18997	0.67	Barchart \| Table
Spo06145	0.67	Barchart \| Table
Spo15406	0.67	Barchart \| Table
Spo05128	0.66	Barchart \| Table
Spo25582	0.66	Barchart \| Table
Spo22108	0.66	Barchart \| Table
Spo22879	0.66	Barchart \| Table
Spo04300	0.65	Barchart \| Table
Spo23299	0.65	Barchart \| Table
Spo21396	0.65	Barchart \| Table
Spo08169	0.65	Barchart \| Table