Spo01252 (gene) | SpinachBase

Overview


Name	Spo01252
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protein disulfide-isomerase SCO2-like protein, putative
Location	chr4 : 74773941 .. 74777018 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAAAAAGATTCACCCTCTAAAGAACTGCCGACCCGGTTTGTACTTGAACAAAATGTGTGTTTAACCAAATATGATCCGAACCCAACCGAACAACCCGATTGTGAACCTCCACTCTGTGCCAAGACTGCCAACACTTCCGTGTTCCCCCCAACCACCACGTTGGCTCGTTCTTTCACCTCTTATCTCTCCGACTCTCATTAGTCCAGCCAAACAAACCTCTCAACCTCCAGCTTCAATGGCGACAAAACAACAATTCCAAACCCAGAATCCCCAATTACTTCAACTCTAATTCACTATTTCCAATCAAAACTCTCAACAAATCACAAGAGTCACGCAATACAATCTTAATCTTAATCTTAATCTTAATCCGTTATATATATATAAAACATGTTTTCGGCAAATTTAAGCACATCTTCTTCCTTAATCACACCCTCAACTTCAACTTCAAAACCCCACTTCCTCTCTCCTCGGTTTATTCCCACCATCTCAATACAATCCCGTGCACCCGATTTCCCGGCAGCTTCCTCCTCTTCATCATCTTCTTCTTCTAATTGGTTTCAAATCCCCGACATTTCTAGACCTCGAGGGAACGACGCCGTTTCAGGGAGTAGCAGCAGCAGCAGTAATAACGACGAGCCAATGTTGAATGGAAAAATAGAGAAGAAATGGTCGAGGAATAGAGAGAGTTATTTATTTGACGATTCTGACCCTCTTCCTCTTCCTATGACCTATCCCAATACTGCCCCTACGTCTCTTGAAGAAATCGATCGTCGTCTTCGTTGCGATCCTCTAACTGAGGTGTATTTTCTTATTAATTTCACTGAAATTGATTACTTGATTAATTCTGTCATTGTGAGTTTTTAATTGTGTTTTTTGCCTAATTGCGAACTTGTTTGAATGAAAAATTGGGTTTTGAGGTAAAGCCTGAAATGTTCGGATATTTCGAGGATGACATTGACATTTTGGGATACTTTGAAGATGAAATTGATATTTTACTACGAATGCTAATTTTTTTTGGGTGGGAGTAGATAGACGGTATTCAATCTCACGTCTGGATACCACCGGGTTCAAAACTTTACCAATTGCGCAACTAGGCTAGCTAGCATCATTGATTAATTTTTTTTGTTCTTCTTCATTGAAGAGTTGTAGAATCAAAGAATTGGGTTGTTAATCACAAATTGGATAATTTTGGTGATTTTGAAGTATTTGGTTGAATTTTTTGGGGTCACTAGCTAGAACTGCAGTTTGTTACGGCACGATTTCTAGTACTCTGTATTATTTAGTTTGCCATTTGTAGGAAGATAATATGACAATGAACCCTATGCTTTCCTAATGTTGTTTGATGGAGATAATAGATTTGGTAAATTGATGGAATTCATGTTGAGTACTGAAGTTTTCATGTGGAAATGGTGGATGGATAGATAGATCAGATTATCCAAGTTTCTGATTATGTAATACTCCCATCTTCATCTTATATGTTATCTTGTCTTATTCTGGTTTTGTTGAGTTTAGGATTGTAAGGTGCCTGTTTTTGAGTGGACGGGGAAGTGTCGGAGTTGCCAAGGATCAGGGTATGTCAACTACTACAACAAAAGAGGGAAGACTACTTGCAAATGCATACCATGTATGGGAATTGGTAAGAATTCTGGAGTTGTTCTGTATTTAGTTTTAATTTCAAATTCCTTTTTTCTGAGGCAAGTTTAGTCATAGCAATCTGTATAACTTTATATTGCCAACGTTGTTATAGAATTTTAGATGCAGTCACAAAGTTTGAAGGCAGGATTAATTAATGAACTGCAATTTTTTGAGCTTTAGTATGTAGTTTCTCTAGGAAAGGTTGAGGGAAAAAAAAGGAAGAGGAGCTCTTCTGTAAAGATCAAAGCTCCTGTGCAAGATTAAGAGTACTTAGATTATAGGCTAATCATAAGTTTGAAGTGTCCTGTCTCAAACAAATGGTAAGAACAGTATGTACACGCAACTATTCTTCATGAGAAATGTTGTACTCGTAGTTCACAAGTGTGCGTCTGAGCAGCATACTGCGAGTCTGCATCCTCTTTACTGATTGTTCATACAAGTATTTGATTAGTGGTATTCTGTTTTTTTATTCTCTAATGTGAAATCTAATTTGGACATTGGTGTTCATTACTTGTAATCCTCTCAGTGAGGATTGTAGTAAGACTACTTGAATGCCGCATTCCTAAGGTCATTCCTTTGAGTATCATTATCACCAGCACTTTCATCACTCTCCATAGCTTTTCCCTTTTTCCAACTGTCCATCCTACTCCCGGGTGTAAAAGTACTCTTGGGTTTCTCTTGGATGGAATTGTGATCAATGGCATTTTGAGTTTCTCATCTTGTAACTTTTTCATTGGGTAATATAGGGGCTGTGGGCCCTGTGGCTTATCTATCTGTATCATCTCGTCTCCTTTCGAATTAGTTAATTTTGTTGTAATCTTCTGCTATTGATGTTTAGCCGATAAGTGCTTATGTAGTGAGTTAGTGAAAGGTAAATCTTATAACTTGTGTTGTATGTTATTTCTTGGCTGCAGGATATGTTCAGAAGATATCGGCCAGAAGGGAGTTTGAATCGATGGAGGATTAAGTAATAGAAACCCACCTTGATCTCATTAGCGACTTGTTAGTTCTTCTTGCTTCAATGTGTAACTCTGTACATTAAAGAATATTCTGATGAGAAATGTTCCTATAACCATATTAATATCAAATTTATAGGGGAAAAAAAGAAGAGAATTTATAAATTTTGTTACGGCAGCATCAGAGCTTCTTAATCTGGAACTTTTTGTTCCATATTTTGTACATAATCTTTAAATTGTAGGGTTGTTTATGCCAAGGTTGAAGCCTAGAAAGGGTCGATGCAACCTGGGAAGAAACACATTAACGTCCTCATGCTACTTATGCTGATAGGATTATGTACTCTTCATTAGTATACTTTGTTGCCATTCCTGTCAATTATTTCCTTGTTAGCAAACAGACTGCAATTGGTCATTTTCGTATAATTTACCCCCTGAAGATTTTGTCAACGTTGCTTGTTAATGTTATGGAGTATTGTGATTTGTG

mRNA sequence

CCCAAAAAAGATTCACCCTCTAAAGAACTGCCGACCCGGTTTGTACTTGAACAAAATGTGTGTTTAACCAAATATGATCCGAACCCAACCGAACAACCCGATTGTGAACCTCCACTCTGTGCCAAGACTGCCAACACTTCCGTGTTCCCCCCAACCACCACGTTGGCTCGTTCTTTCACCTCTTATCTCTCCGACTCTCATTAGTCCAGCCAAACAAACCTCTCAACCTCCAGCTTCAATGGCGACAAAACAACAATTCCAAACCCAGAATCCCCAATTACTTCAACTCTAATTCACTATTTCCAATCAAAACTCTCAACAAATCACAAGAGTCACGCAATACAATCTTAATCTTAATCTTAATCTTAATCCGTTATATATATATAAAACATGTTTTCGGCAAATTTAAGCACATCTTCTTCCTTAATCACACCCTCAACTTCAACTTCAAAACCCCACTTCCTCTCTCCTCGGTTTATTCCCACCATCTCAATACAATCCCGTGCACCCGATTTCCCGGCAGCTTCCTCCTCTTCATCATCTTCTTCTTCTAATTGGTTTCAAATCCCCGACATTTCTAGACCTCGAGGGAACGACGCCGTTTCAGGGAGTAGCAGCAGCAGCAGTAATAACGACGAGCCAATGTTGAATGGAAAAATAGAGAAGAAATGGTCGAGGAATAGAGAGAGTTATTTATTTGACGATTCTGACCCTCTTCCTCTTCCTATGACCTATCCCAATACTGCCCCTACGTCTCTTGAAGAAATCGATCGTCGTCTTCGTTGCGATCCTCTAACTGAGGATTGTAAGGTGCCTGTTTTTGAGTGGACGGGGAAGTGTCGGAGTTGCCAAGGATCAGGGTATGTCAACTACTACAACAAAAGAGGGAAGACTACTTGCAAATGCATACCATGTATGGGAATTGGATATGTTCAGAAGATATCGGCCAGAAGGGAGTTTGAATCGATGGAGGATTAAGTAATAGAAACCCACCTTGATCTCATTAGCGACTTGTTAGTTCTTCTTGCTTCAATGTGTAACTCTGTACATTAAAGAATATTCTGATGAGAAATGTTCCTATAACCATATTAATATCAAATTTATAGGGGAAAAAAAGAAGAGAATTTATAAATTTTGTTACGGCAGCATCAGAGCTTCTTAATCTGGAACTTTTTGTTCCATATTTTGTACATAATCTTTAAATTGTAGGGTTGTTTATGCCAAGGTTGAAGCCTAGAAAGGGTCGATGCAACCTGGGAAGAAACACATTAACGTCCTCATGCTACTTATGCTGATAGGATTATGTACTCTTCATTAGTATACTTTGTTGCCATTCCTGTCAATTATTTCCTTGTTAGCAAACAGACTGCAATTGGTCATTTTCGTATAATTTACCCCCTGAAGATTTTGTCAACGTTGCTTGTTAATGTTATGGAGTATTGTGATTTGTG

Coding sequence (CDS)

ATGTTTTCGGCAAATTTAAGCACATCTTCTTCCTTAATCACACCCTCAACTTCAACTTCAAAACCCCACTTCCTCTCTCCTCGGTTTATTCCCACCATCTCAATACAATCCCGTGCACCCGATTTCCCGGCAGCTTCCTCCTCTTCATCATCTTCTTCTTCTAATTGGTTTCAAATCCCCGACATTTCTAGACCTCGAGGGAACGACGCCGTTTCAGGGAGTAGCAGCAGCAGCAGTAATAACGACGAGCCAATGTTGAATGGAAAAATAGAGAAGAAATGGTCGAGGAATAGAGAGAGTTATTTATTTGACGATTCTGACCCTCTTCCTCTTCCTATGACCTATCCCAATACTGCCCCTACGTCTCTTGAAGAAATCGATCGTCGTCTTCGTTGCGATCCTCTAACTGAGGATTGTAAGGTGCCTGTTTTTGAGTGGACGGGGAAGTGTCGGAGTTGCCAAGGATCAGGGTATGTCAACTACTACAACAAAAGAGGGAAGACTACTTGCAAATGCATACCATGTATGGGAATTGGATATGTTCAGAAGATATCGGCCAGAAGGGAGTTTGAATCGATGGAGGATTAA

Protein sequence

MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIPDISRPRGNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAPTSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGKTTCKCIPCMGIGYVQKISARREFESMED

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo01252.1	Spo01252.1	mRNA

Homology

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BLAST of Spo01252.1 vs. NCBI nr
Match: gi|902206418|gb|KNA15462.1| (hypothetical protein SOVF_098020 [Spinacia oleracea])

HSP 1 Score: 394.0 bits (1011), Expect = 1.500e-106
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1

		  
Query: 1   MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP 60
           MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP
Sbjct: 1   MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP 60

Query: 61  DISRPRGNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAP 120
           DISRPRGNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAP
Sbjct: 61  DISRPRGNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAP 120

Query: 121 TSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGKTTCKCIPCMGIGY 180
           TSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGKTTCKCIPCMGIGY
Sbjct: 121 TSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGKTTCKCIPCMGIGY 180

Query: 181 VQKISARREFESMED 196
           VQKISARREFESMED
Sbjct: 181 VQKISARREFESMED 195

[Close]

BLAST of Spo01252.1 vs. NCBI nr
Match: gi|731358572|ref|XP_010690823.1| (PREDICTED: protein disulfide-isomerase SCO2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 266.9 bits (681), Expect = 2.700e-68
Identity = 143/199 (71.86%), Postives = 155/199 (77.89%), Query Frame = 1

		  
Query: 1   MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP 60
           MF+ANLSTSSS I+P  STSKP+FLSP    TISIQ RAPDF AASSSSS    NWFQ P
Sbjct: 1   MFAANLSTSSSFISPIPSTSKPYFLSPPHNYTISIQCRAPDFSAASSSSSP---NWFQFP 60

Query: 61  DISRPR---GNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPN 120
           DIS PR     DAV G      NN    +NGK EKKWSRNRESYL D+SDPLPLPMTYP+
Sbjct: 61  DISGPRIPREKDAVLGGG----NNGGSSINGKREKKWSRNRESYLSDNSDPLPLPMTYPD 120

Query: 121 TAPTSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGK-TTCKCIPCM 180
           T P S EEIDRRL CDP  EDC+V  +EWTGKCRSCQGSGYV+YYNKRGK TTCKCIPC 
Sbjct: 121 TTPISPEEIDRRLSCDPQIEDCRVVFYEWTGKCRSCQGSGYVDYYNKRGKSTTCKCIPCA 180

Query: 181 GIGYVQKISARREFESMED 196
           GIGYVQKI+AR++FE MED
Sbjct: 181 GIGYVQKITARKDFELMED 192

[Close]

BLAST of Spo01252.1 vs. NCBI nr
Match: gi|697097515|ref|XP_009621914.1| (PREDICTED: protein disulfide-isomerase SCO2-like isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 190.3 bits (482), Expect = 3.200e-45
Identity = 107/191 (56.02%), Postives = 128/191 (67.02%), Query Frame = 1

		  
Query: 10  SSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSS----SSSNWFQIPDISRP 69
           SS+ TP+  T    FLSP    TI I+  A   P A  SSSS    S+++    P   R 
Sbjct: 7   SSIFTPTRFTCSA-FLSPHPKTTIFIRCHAAADPPAGPSSSSFNFVSTADAASSPSAGRI 66

Query: 70  RGNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAPTSLEE 129
             N   +      S++    +NG  E+ WSRNRESYL DD +PLPLPMTYPNT+P S EE
Sbjct: 67  SQNSDGTAPVEKRSSSKNMKINGW-ERPWSRNRESYLADDGEPLPLPMTYPNTSPVSPEE 126

Query: 130 IDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGK-TTCKCIPCMGIGYVQKI 189
           IDRRLRCDP  EDCK  V+EWTGKCRSCQG+G+V+YYNKRGK T CKCIPC GIGYVQKI
Sbjct: 127 IDRRLRCDPQIEDCKEVVYEWTGKCRSCQGTGFVSYYNKRGKETICKCIPCQGIGYVQKI 186

Query: 190 SARREFESMED 196
           +AR++ + MED
Sbjct: 187 TARKDIDVMED 195

[Close]

BLAST of Spo01252.1 vs. NCBI nr
Match: gi|778680082|ref|XP_004140700.2| (PREDICTED: protein disulfide-isomerase SCO2 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 4.700e-44
Identity = 102/210 (48.57%), Postives = 131/210 (62.38%), Query Frame = 1

		  
Query: 1   MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP 60
           MF+ N S+      P+T+T++ H +SP     +S+ +         +S   S S  F  P
Sbjct: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAA------TGDASPDPSISRLFNFP 60

Query: 61  DISRPRGNDAVSGSSSSSSNNDEPMLNGK--------------IEKKWSRNRESYLFDDS 120
            +S        S      +    P+++G               +EKKWSR+RESYL DDS
Sbjct: 61  SLSATDATGGFSLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDS 120

Query: 121 DPLPLPMTYPNTAPTSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRG 180
           D LPLPMTYP+++P S +EIDRRLRCDP  EDCK  V+EWTGKCRSCQGSGYV+YYNKRG
Sbjct: 121 DVLPLPMTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRG 180

Query: 181 K-TTCKCIPCMGIGYVQKISARREFESMED 196
           +  TCKCIPC+GIGYVQKI+AR++ E MED
Sbjct: 181 REITCKCIPCLGIGYVQKITARKDIELMED 204

[Close]

BLAST of Spo01252.1 vs. NCBI nr
Match: gi|848872777|ref|XP_012836948.1| (PREDICTED: protein disulfide-isomerase SCO2 isoform X2 [Erythranthe guttata])

HSP 1 Score: 185.3 bits (469), Expect = 1.000e-43
Identity = 97/176 (55.11%), Postives = 121/176 (68.75%), Query Frame = 1

		  
Query: 31  PTISIQSRAPDFPA----ASSSSSSSSSNWFQIPDISRPRGNDAVSGSSS------SSSN 90
           P +S+ + +P F A    A+++ ++    WF     S   G    SGSS       SSSN
Sbjct: 16  PLVSLPALSPSFAAFRCRAAAADNTYPRPWFSFASASDAAGIRIGSGSSDNTGSGISSSN 75

Query: 91  NDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAPTSLEEIDRRLRCDPLTEDCK 150
           N +  +N K E  WSR+RESY  DD D LPLPMT+PN++P S EEID+RL CDP+T+DCK
Sbjct: 76  NKDTKINAKKEN-WSRDRESYFADDGDALPLPMTHPNSSPVSPEEIDKRLNCDPVTQDCK 135

Query: 151 VPVFEWTGKCRSCQGSGYVNYYNKRGKTT-CKCIPCMGIGYVQKISARREFESMED 196
             V+EWTGKCRSCQGSG V+YYNKRGK T CKCIPC GIGYVQKI+AR++ + MED
Sbjct: 136 PMVYEWTGKCRSCQGSGLVSYYNKRGKETLCKCIPCQGIGYVQKITARKDIDVMED 190

[Close]

BLAST of Spo01252.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9J6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_098020 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.000e-106
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1

		  
Query: 1   MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP 60
           MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP
Sbjct: 1   MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP 60

Query: 61  DISRPRGNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAP 120
           DISRPRGNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAP
Sbjct: 61  DISRPRGNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAP 120

Query: 121 TSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGKTTCKCIPCMGIGY 180
           TSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGKTTCKCIPCMGIGY
Sbjct: 121 TSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGKTTCKCIPCMGIGY 180

Query: 181 VQKISARREFESMED 196
           VQKISARREFESMED
Sbjct: 181 VQKISARREFESMED 195

[Close]

BLAST of Spo01252.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BG60_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g216950 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.900e-68
Identity = 143/199 (71.86%), Postives = 155/199 (77.89%), Query Frame = 1

		  
Query: 1   MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP 60
           MF+ANLSTSSS I+P  STSKP+FLSP    TISIQ RAPDF AASSSSS    NWFQ P
Sbjct: 1   MFAANLSTSSSFISPIPSTSKPYFLSPPHNYTISIQCRAPDFSAASSSSSP---NWFQFP 60

Query: 61  DISRPR---GNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPN 120
           DIS PR     DAV G      NN    +NGK EKKWSRNRESYL D+SDPLPLPMTYP+
Sbjct: 61  DISGPRIPREKDAVLGGG----NNGGSSINGKREKKWSRNRESYLSDNSDPLPLPMTYPD 120

Query: 121 TAPTSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGK-TTCKCIPCM 180
           T P S EEIDRRL CDP  EDC+V  +EWTGKCRSCQGSGYV+YYNKRGK TTCKCIPC 
Sbjct: 121 TTPISPEEIDRRLSCDPQIEDCRVVFYEWTGKCRSCQGSGYVDYYNKRGKSTTCKCIPCA 180

Query: 181 GIGYVQKISARREFESMED 196
           GIGYVQKI+AR++FE MED
Sbjct: 181 GIGYVQKITARKDFELMED 192

[Close]

BLAST of Spo01252.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L6G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207360 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.300e-44
Identity = 102/210 (48.57%), Postives = 131/210 (62.38%), Query Frame = 1

		  
Query: 1   MFSANLSTSSSLITPSTSTSKPHFLSPRFIPTISIQSRAPDFPAASSSSSSSSSNWFQIP 60
           MF+ N S+      P+T+T++ H +SP     +S+ +         +S   S S  F  P
Sbjct: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAA------TGDASPDPSISRLFNFP 60

Query: 61  DISRPRGNDAVSGSSSSSSNNDEPMLNGK--------------IEKKWSRNRESYLFDDS 120
            +S        S      +    P+++G               +EKKWSR+RESYL DDS
Sbjct: 61  SLSATDATGGFSLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDS 120

Query: 121 DPLPLPMTYPNTAPTSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRG 180
           D LPLPMTYP+++P S +EIDRRLRCDP  EDCK  V+EWTGKCRSCQGSGYV+YYNKRG
Sbjct: 121 DVLPLPMTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRG 180

Query: 181 K-TTCKCIPCMGIGYVQKISARREFESMED 196
           +  TCKCIPC+GIGYVQKI+AR++ E MED
Sbjct: 181 REITCKCIPCLGIGYVQKITARKDIELMED 204

[Close]

BLAST of Spo01252.1 vs. UniProtKB/TrEMBL
Match: A0A022RBP9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014322mg PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.300e-44
Identity = 97/176 (55.11%), Postives = 121/176 (68.75%), Query Frame = 1

		  
Query: 31  PTISIQSRAPDFPA----ASSSSSSSSSNWFQIPDISRPRGNDAVSGSSS------SSSN 90
           P +S+ + +P F A    A+++ ++    WF     S   G    SGSS       SSSN
Sbjct: 16  PLVSLPALSPSFAAFRCRAAAADNTYPRPWFSFASASDAAGIRIGSGSSDNTGSGISSSN 75

Query: 91  NDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAPTSLEEIDRRLRCDPLTEDCK 150
           N +  +N K E  WSR+RESY  DD D LPLPMT+PN++P S EEID+RL CDP+T+DCK
Sbjct: 76  NKDTKINAKKEN-WSRDRESYFADDGDALPLPMTHPNSSPVSPEEIDKRLNCDPVTQDCK 135

Query: 151 VPVFEWTGKCRSCQGSGYVNYYNKRGKTT-CKCIPCMGIGYVQKISARREFESMED 196
             V+EWTGKCRSCQGSG V+YYNKRGK T CKCIPC GIGYVQKI+AR++ + MED
Sbjct: 136 PMVYEWTGKCRSCQGSGLVSYYNKRGKETLCKCIPCQGIGYVQKITARKDIDVMED 190

[Close]

BLAST of Spo01252.1 vs. UniProtKB/TrEMBL
Match: V4UAH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029362mg PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.900e-42
Identity = 94/158 (59.49%), Postives = 112/158 (70.89%), Query Frame = 1

		  
Query: 42  FPAASSSSSSSSSNW---FQIPDISRPRGNDAVSGSSSSSSNNDEPMLNGKIEKKWSRNR 101
           F A+   +  +S  W       DIS   G DA   +   S    +  +N K EKKWSRNR
Sbjct: 23  FAASDIPAGPNSLRWPHFSSAADISIRVGPDAEGTAVGGSHGGVK--VNAK-EKKWSRNR 82

Query: 102 ESYLFDDSDPLPLPMTYPNTAPTSLEEIDRRLRCDPLTEDCKVPVFEWTGKCRSCQGSGY 161
           ESYL DDS+PLPLPMTYP+++P   EEID+RLRCDP  +DCK  V+EWTGKCRSCQGSGY
Sbjct: 83  ESYLTDDSEPLPLPMTYPDSSPVPREEIDKRLRCDPEVQDCKEVVYEWTGKCRSCQGSGY 142

Query: 162 VNYYNKRGK-TTCKCIPCMGIGYVQKISARREFESMED 196
           V+YYNKRGK   CKCIPC+GIGYVQKI+AR++ E MED
Sbjct: 143 VSYYNKRGKEIICKCIPCLGIGYVQKITARKDIEVMED 177

[Close]

BLAST of Spo01252.1 vs. ExPASy Swiss-Prot
Match: SCO2_ARATH (Protein disulfide-isomerase SCO2 OS=Arabidopsis thaliana GN=SCO2 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.200e-37
Identity = 90/188 (47.87%), Postives = 113/188 (60.11%), Query Frame = 1

		  
Query: 16  STSTSKPHFLSPRFIPTISIQSRAP-DFPAASSSSSSSSSNWFQIPDISRPRGNDAVSGS 75
           S  + +P    PR +P+ S++ RA  D P                  I  PR  D+ S +
Sbjct: 9   SLPSHRPLVFLPR-LPSRSLRCRAAADIPLGDG--------------IRLPREADSTSDT 68

Query: 76  SSS------SSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAPTSLEEIDR 135
           + S      +  N E     K    WS++ ESYL DD D LPLPMTYP+T+P S + IDR
Sbjct: 69  ARSRDVSVAAGGNGEGAKWRKRRLLWSKSGESYLVDDGDALPLPMTYPDTSPVSPDVIDR 128

Query: 136 RLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGK-TTCKCIPCMGIGYVQKISAR 195
           RL+CDP+ EDC+  V+EWTGKCRSCQGSG V+YY KRGK   CKCIPC GIGYVQKI++R
Sbjct: 129 RLQCDPVVEDCREVVYEWTGKCRSCQGSGTVSYYKKRGKEVICKCIPCQGIGYVQKITSR 181

[Close]

BLAST of Spo01252.1 vs. TAIR (Arabidopsis)
Match: AT3G19220.1 (protein disulfide isomerases)

HSP 1 Score: 156.0 bits (393), Expect = 2.400e-38
Identity = 90/188 (47.87%), Postives = 113/188 (60.11%), Query Frame = 1

		  
Query: 16  STSTSKPHFLSPRFIPTISIQSRAP-DFPAASSSSSSSSSNWFQIPDISRPRGNDAVSGS 75
           S  + +P    PR +P+ S++ RA  D P                  I  PR  D+ S +
Sbjct: 9   SLPSHRPLVFLPR-LPSRSLRCRAAADIPLGDG--------------IRLPREADSTSDT 68

Query: 76  SSS------SSNNDEPMLNGKIEKKWSRNRESYLFDDSDPLPLPMTYPNTAPTSLEEIDR 135
           + S      +  N E     K    WS++ ESYL DD D LPLPMTYP+T+P S + IDR
Sbjct: 69  ARSRDVSVAAGGNGEGAKWRKRRLLWSKSGESYLVDDGDALPLPMTYPDTSPVSPDVIDR 128

Query: 136 RLRCDPLTEDCKVPVFEWTGKCRSCQGSGYVNYYNKRGK-TTCKCIPCMGIGYVQKISAR 195
           RL+CDP+ EDC+  V+EWTGKCRSCQGSG V+YY KRGK   CKCIPC GIGYVQKI++R
Sbjct: 129 RLQCDPVVEDCREVVYEWTGKCRSCQGSGTVSYYKKRGKEVICKCIPCQGIGYVQKITSR 181

The following BLAST results are available for this feature:

BLAST of Spo01252.1 vs. NCBI nr
BLAST of Spo01252.1 vs. UniProtKB/TrEMBL
BLAST of Spo01252.1 vs. ExPASy Swiss-Prot
BLAST of Spo01252.1 vs. TAIR (Arabidopsis)

BLAST of Spo01252.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902206418\|gb\|KNA15462.1\|	1.5e-106	100.	hypothetical protein SOVF_0980...	[more]
gi\|731358572\|ref\|XP_010690823.1\|	2.7e-68	71.8	PREDICTED: protein disulfide-i...	[more]
gi\|697097515\|ref\|XP_009621914.1\|	3.2e-45	56.0	PREDICTED: protein disulfide-i...	[more]
gi\|778680082\|ref\|XP_004140700.2\|	4.7e-44	48.5	PREDICTED: protein disulfide-i...	[more]
gi\|848872777\|ref\|XP_012836948.1\|	1.0e-43	55.1	PREDICTED: protein disulfide-i...	[more]

BLAST of Spo01252.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9R9J6_SPIOL	1.0e-106	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BG60_BETVU	1.9e-68	71.8	Uncharacterized protein OS=Bet...	[more]
A0A0A0L6G9_CUCSA	3.3e-44	48.5	Uncharacterized protein OS=Cuc...	[more]
A0A022RBP9_ERYGU	7.3e-44	55.1	Uncharacterized protein OS=Ery...	[more]
V4UAH8_9ROSI	8.9e-42	59.4	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo01252.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
SCO2_ARATH	4.2e-37	47.8	Protein disulfide-isomerase SC...	[more]

BLAST of Spo01252.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G19220.1	2.4e-38	47.8	protein disulfide isomerases	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36035	FAMILY NOT NAMED	coord: 78..195 score: 1.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006457	protein folding
biological_process	GO:0006412	translation
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0009555	pollen development
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0051604	protein maturation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0006508	proteolysis
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0006223	uracil salvage
biological_process	GO:0016556	mRNA modification
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0044206	UMP salvage
biological_process	GO:0032502	developmental process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009534	chloroplast thylakoid
molecular_function	GO:0003756	protein disulfide isomerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004845	uracil phosphoribosyltransferase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11688	0.86	Barchart \| Table
Spo12682	0.81	Barchart \| Table
Spo08407	0.80	Barchart \| Table
Spo00256	0.80	Barchart \| Table
Spo25008	0.79	Barchart \| Table
Spo02918	0.79	Barchart \| Table
Spo25196	0.79	Barchart \| Table
Spo12875	0.79	Barchart \| Table
Spo10835	0.78	Barchart \| Table
Spo09769	0.78	Barchart \| Table
Spo04200	0.78	Barchart \| Table
Spo14914	0.78	Barchart \| Table
Spo23332	0.78	Barchart \| Table
Spo09387	0.78	Barchart \| Table
Spo13981	0.78	Barchart \| Table
Spo09554	0.77	Barchart \| Table
Spo19288	0.77	Barchart \| Table
Spo26975	0.77	Barchart \| Table
Spo06953	0.77	Barchart \| Table
Spo23382	0.77	Barchart \| Table
Spo02696	0.77	Barchart \| Table
Spo20106	0.76	Barchart \| Table
Spo23154	0.76	Barchart \| Table
Spo00214	0.76	Barchart \| Table
Spo14256	0.75	Barchart \| Table
Spo15390	0.75	Barchart \| Table
Spo21144	0.75	Barchart \| Table
Spo18223	0.75	Barchart \| Table
Spo06637	0.75	Barchart \| Table
Spo13499	0.75	Barchart \| Table
Spo08478	0.75	Barchart \| Table
Spo19217	0.74	Barchart \| Table
Spo19341	0.74	Barchart \| Table
Spo05307	0.74	Barchart \| Table
Spo01281	0.74	Barchart \| Table
Spo00872	0.74	Barchart \| Table
Spo07548	0.74	Barchart \| Table
Spo11524	0.74	Barchart \| Table
Spo24430	0.74	Barchart \| Table
Spo25985	0.74	Barchart \| Table
Spo15499	0.73	Barchart \| Table
Spo02648	0.73	Barchart \| Table
Spo22999	0.73	Barchart \| Table
Spo27364	0.73	Barchart \| Table
Spo17740	0.73	Barchart \| Table
Spo23712	0.73	Barchart \| Table
Spo15461	0.73	Barchart \| Table
Spo05125	0.73	Barchart \| Table
Spo09798	0.73	Barchart \| Table
Spo21660	0.73	Barchart \| Table
Spo02106	0.73	Barchart \| Table
Spo04123	0.73	Barchart \| Table
Spo22167	0.73	Barchart \| Table
Spo00205	0.72	Barchart \| Table
Spo06170	0.72	Barchart \| Table
Spo09625	0.72	Barchart \| Table
Spo13783	0.72	Barchart \| Table
Spo19383	0.72	Barchart \| Table
Spo20050	0.72	Barchart \| Table
Spo21833	0.72	Barchart \| Table
Spo23415	0.72	Barchart \| Table
Spo23800	0.72	Barchart \| Table
Spo24016	0.72	Barchart \| Table
Spo26211	0.72	Barchart \| Table
Spo26697	0.72	Barchart \| Table
Spo27136	0.72	Barchart \| Table
Spo23745	0.71	Barchart \| Table
Spo21159	0.71	Barchart \| Table
Spo01054	0.71	Barchart \| Table
Spo15524	0.71	Barchart \| Table
Spo08351	0.71	Barchart \| Table
Spo18285	0.71	Barchart \| Table
Spo09232	0.71	Barchart \| Table
Spo02396	0.71	Barchart \| Table
Spo26423	0.71	Barchart \| Table
Spo10491	0.71	Barchart \| Table
Spo22998	0.71	Barchart \| Table
Spo01628	0.71	Barchart \| Table
Spo15222	0.71	Barchart \| Table
Spo07915	0.70	Barchart \| Table
Spo18578	0.70	Barchart \| Table
Spo26610	0.70	Barchart \| Table
Spo00743	0.70	Barchart \| Table
Spo20458	0.70	Barchart \| Table
Spo14630	0.70	Barchart \| Table
Spo18104	0.70	Barchart \| Table
Spo00943	0.70	Barchart \| Table
Spo16996	0.70	Barchart \| Table
Spo15317	0.70	Barchart \| Table
Spo24675	0.70	Barchart \| Table
Spo09335	0.70	Barchart \| Table
Spo00677	0.70	Barchart \| Table
Spo19938	0.70	Barchart \| Table
Spo00526	0.70	Barchart \| Table
Spo02232	0.70	Barchart \| Table
Spo02665	0.70	Barchart \| Table
Spo06335	0.70	Barchart \| Table
Spo21600	0.70	Barchart \| Table
Spo24010	0.70	Barchart \| Table
Spo25987	0.69	Barchart \| Table
Spo23327	0.69	Barchart \| Table
Spo23076	0.69	Barchart \| Table
Spo20912	0.69	Barchart \| Table
Spo06453	0.69	Barchart \| Table
Spo25804	0.69	Barchart \| Table
Spo10864	0.69	Barchart \| Table
Spo25783	0.69	Barchart \| Table
Spo05653	0.69	Barchart \| Table
Spo24425	0.69	Barchart \| Table
Spo08935	0.69	Barchart \| Table
Spo24495	0.68	Barchart \| Table
Spo15702	0.68	Barchart \| Table
Spo15585	0.68	Barchart \| Table
Spo13393	0.68	Barchart \| Table
Spo15266	0.68	Barchart \| Table
Spo17337	0.68	Barchart \| Table
Spo24324	0.68	Barchart \| Table
Spo00498	0.68	Barchart \| Table
Spo21155	0.68	Barchart \| Table
Spo03362	0.68	Barchart \| Table
Spo25717	0.68	Barchart \| Table
Spo25817	0.68	Barchart \| Table
Spo12965	0.68	Barchart \| Table
Spo06278	0.68	Barchart \| Table
Spo11964	0.68	Barchart \| Table
Spo11668	0.68	Barchart \| Table
Spo21808	0.68	Barchart \| Table
Spo23853	0.68	Barchart \| Table
Spo06398	0.68	Barchart \| Table
Spo16005	0.68	Barchart \| Table
Spo25573	0.67	Barchart \| Table
Spo08097	0.67	Barchart \| Table
Spo10898	0.67	Barchart \| Table
Spo11417	0.67	Barchart \| Table
Spo12228	0.67	Barchart \| Table
Spo12976	0.67	Barchart \| Table
Spo13583	0.67	Barchart \| Table
Spo26355	0.67	Barchart \| Table
Spo13788	0.67	Barchart \| Table
Spo13905	0.67	Barchart \| Table
Spo14354	0.67	Barchart \| Table
Spo03906	0.67	Barchart \| Table
Spo15995	0.67	Barchart \| Table
Spo16844	0.67	Barchart \| Table
Spo17612	0.67	Barchart \| Table
Spo18184	0.67	Barchart \| Table
Spo02979	0.67	Barchart \| Table
Spo18336	0.67	Barchart \| Table
Spo20930	0.67	Barchart \| Table
Spo21446	0.67	Barchart \| Table
Spo21566	0.67	Barchart \| Table
Spo22004	0.67	Barchart \| Table
Spo00405	0.67	Barchart \| Table
Spo24046	0.67	Barchart \| Table
Spo24623	0.67	Barchart \| Table
Spo00667	0.67	Barchart \| Table
Spo25395	0.67	Barchart \| Table
Spo08997	0.67	Barchart \| Table
Spo08824	0.67	Barchart \| Table
Spo28267	0.67	Barchart \| Table
Spo08114	0.67	Barchart \| Table
Spo23257	0.66	Barchart \| Table
Spo19431	0.66	Barchart \| Table
Spo14667	0.66	Barchart \| Table
Spo14403	0.66	Barchart \| Table
Spo14350	0.66	Barchart \| Table
Spo12954	0.66	Barchart \| Table
Spo26688	0.66	Barchart \| Table
Spo11509	0.66	Barchart \| Table
Spo01928	0.66	Barchart \| Table
Spo22811	0.66	Barchart \| Table
Spo21636	0.66	Barchart \| Table
Spo21215	0.66	Barchart \| Table
Spo23249	0.66	Barchart \| Table
Spo20174	0.66	Barchart \| Table
Spo12868	0.66	Barchart \| Table
Spo23558	0.66	Barchart \| Table
Spo23807	0.66	Barchart \| Table
Spo19123	0.66	Barchart \| Table
Spo17578	0.66	Barchart \| Table
Spo12609	0.66	Barchart \| Table
Spo17577	0.66	Barchart \| Table
Spo16960	0.66	Barchart \| Table
Spo16801	0.66	Barchart \| Table
Spo16213	0.66	Barchart \| Table
Spo09777	0.66	Barchart \| Table
Spo24657	0.66	Barchart \| Table
Spo04725	0.66	Barchart \| Table
Spo08591	0.66	Barchart \| Table
Spo05012	0.66	Barchart \| Table
Spo00877	0.65	Barchart \| Table
Spo00539	0.65	Barchart \| Table
Spo10284	0.65	Barchart \| Table
Spo02573	0.65	Barchart \| Table
Spo02649	0.65	Barchart \| Table
Spo26858	0.65	Barchart \| Table
Spo13161	0.65	Barchart \| Table
Spo00966	0.65	Barchart \| Table
Spo19018	0.65	Barchart \| Table
Spo06362	0.65	Barchart \| Table
Spo20648	0.65	Barchart \| Table
Spo05942	0.65	Barchart \| Table