Spo01391 (gene)

Overview
NameSpo01391
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01960 : 14999 .. 16498 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAGTGGCTATGCATTTGCCAGTCCCGTGTTTTTAAAAGAGGGTGTGGCATAAGTTAACTCTTTGCAGACAGCCTTAAGGTAATTCTCTTCAGTCATGACACTTTCTTATTGTGCTACCTCATACTTGTGCCTTTTGATGCTTTTTTCGAGGCCTTGTATTTATTTCTACAATTGGGTATAGACTAAGGATTGAAATTACAGATTTAAGGCTGTTGGTTTTACCCAGATATGATCTAAATTATCAGGTTTAAATAGGATAAGCGTAATCATTTTAGTTTTTTCCTTTTTTGGCGGTGTTTAGGATTTGTAGAATTTGCAAACTCAGCTACGGGGTTGAACGTGCAATGGTTGGAGTTGATCATTTCTGTTTCAAGGTTCGTGTCATTTAAATTTGGTTCAAGACACCAACTACAAGGTTTTCATGTTCTTTGGTTAATATATATTGCTTAACTCATGTCATTAAAGCAAGGAGAGATGCAGATTTTCTTGGTTTTCCTGTTTTGCCAACTGATGTCAAAGATCATCTTTCAAGGTAGTGAAAGCAACGCATACTCCATCAGAAATGCAACATTACAGTCTTTTTGGTTTTCGTCATTCCTAATTATTGTCATGTTTGTAGGTATATATGTTGAGAAATAAGAAGCATGCATTTATCAAGGATTACACTGAAGCCCATACCAAACTCAACAACCTTGGAGCCACATTTATCCCCCGAGGTCTGTCTTATTCCCAAATCTAATGTATAGGTTCTCTTTAACATTTGTATCTGGCTCTCCTCCTGTAAAACTTTTCCCCTTCTTTTGGGGTGGGTGAGGTGGTGAGCCTCATACTATTTGTATCTAAAATTTTGTGCCCTCAAACCCTAAAGCCATATATTATCTTGAAGGCCAATATAGTATCTTGAAGGCCAATTTATTATATATGAAGTACTCCCAAATACTGATTACGTTTTATTGATATATATGAAGTACCTTTTATCTTTGATCATATTTAGTGTTGCTGGATATTCTTTTTCATTCAAAATCGAGTTTTGAGTTTCGAGCATTTGACATGTTCAAGTCTTTTTCCTTGTTCTCTTTCTTTAATCTTGATGATATGTTCTCTTGTTGCACTGTAGTAAGAGATTTGCACGAAAATCATGAACCCAAAAAAAAAAAAGTATTTCATTAGTTGTCCTTGTTTTAAACAACAGCTAACATATGGGAAATAGAATGTGTTTAGAAGCTAAGATCACTGTTAGGCCAAGCCTTAACGCCTTTTGCCTTGTGAAAGATAAAAACTATTGAATTGTAGTGCTTTTATTTGGCTCTTCAGCTGAACACTTCACTATTCTGCTGTAGAATTTCAGTTGGCACAAAAGAGGTCAAGATGTGCTGAAATGCATCCGTTGTGTCGTTCCCAAATGAGTTGATCATGAACTCAGCTGAACTACAAGCTGCAGGAACTGATGACCCTCTGTACACTTTGCAGATGTACGCAATGAAGGTTTGGTAG

mRNA sequence

ATGAGATTTGTAGAATTTGCAAACTCAGCTACGGGGTTGAACGTGCAATGGTTGGAGTTGATCATTTCTGTTTCAAGATCATCTTTCAAGGTATATATGTTGAGAAATAAGAAGCATGCATTTATCAAGGATTACACTGAAGCCCATACCAAACTCAACAACCTTGGAGCCACATTTATCCCCCGAGCTGAACTACAAGCTGCAGGAACTGATGACCCTCTGTACACTTTGCAGATGTACGCAATGAAGGTTTGGTAG

Coding sequence (CDS)

ATGAGATTTGTAGAATTTGCAAACTCAGCTACGGGGTTGAACGTGCAATGGTTGGAGTTGATCATTTCTGTTTCAAGATCATCTTTCAAGGTATATATGTTGAGAAATAAGAAGCATGCATTTATCAAGGATTACACTGAAGCCCATACCAAACTCAACAACCTTGGAGCCACATTTATCCCCCGAGCTGAACTACAAGCTGCAGGAACTGATGACCCTCTGTACACTTTGCAGATGTACGCAATGAAGGTTTGGTAG

Protein sequence

MRFVEFANSATGLNVQWLELIISVSRSSFKVYMLRNKKHAFIKDYTEAHTKLNNLGATFIPRAELQAAGTDDPLYTLQMYAMKVW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01391.1Spo01391.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo01391.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01391.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01391.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01391.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
RNA-Seq Expression