Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAAGTCAAATGTAGTTGAAGTATCCATTAACCAGAGCTAAAAGTGGCAATTAGTCAATTACAACATCTCCATTCATCATCATCTCCTTCGAACACCAGAAATCATGAAACAAAACTTGATGCAGAAATCAATGGAAGCCCCAATGCGAATTCTAAACCCTAACCATCTCAACTTGAATTTCAATCGTCAATTATCCCCCAAATTCTTCCCCAATTCTCACTCTCTTTCTCTCATTCCCACTCTCAAATCCCGCTACTGCATTTCTCTCTCCTCAAATTCCTTCAACAATGCCACTTCCCGTCCCTTCTCTTTCCCGAATTCCTCCCAATTAGGGTTTCTCCTTTCTCTCTCCTCCAATACTCAATTCCACTCCAACAATCTCAACCACCCCAAATCCCACCCTGACAACAGCAGATTCTTCAACTGGCACAAAGCTTCTGCGCCACTCGCCGGAGCTCCCGCCACCGTAGGAAAACCCGAGGTAGCGGCTGTGATATTGGGGTGGTTAGGAGCGACGCCGAAGCATTTGAGGAGGTATGCGGAGTTGTACACTTCGAGAGGGATTGATGCAATCACCTTTGTTGTTCCTGTTAGAGACGTGCTTTGGTTTGATTTGGGGAGAAAGGTTGAGAATCGGATTCAAGAGTTGACGAATGAGATTGTTTCATGGCTTTCGAAGGCGGAAGGCGGTGGCGGAAAGCGGTGCTTAATCTTTCACACATTCAGCAACACCGGTTGGCTTGTGTAGGTTGATTCCACTTCTTCCTAATTTACCAATTTTATTTTCTATACTGTATATGTTGAAGTACTTATATTTTCTGTAGATTTAACTTTAATTGCTAAAATGGGGATTAACTTATTAGTTCAGAATACTGATGCATCATTGCAGCCACTTAAACATGTGTGCATGCATCATCAAGACAATGGGAGTTGTGTCTCGTTTGTGTAGTGATCATAAATTGCAGGAATTGCAATACATTTGTATGTAATTTCGATAGGAAATCTCATGTTTATTACATATACTCCGTAATAATATAAGGTATTTGGGGATGGACTAGGATGACATGAGGTTTTCTTTGCAGAAGAACTAATATAATCATCATCGTTACCATCATTTATTACCCCCTAAAACAGCTGTTTGGGACTTTGAAGCATAATGTGGTTAAGGATTGTAGTTCCTTATGTTGAAATAAGTGTTATTCAGTTAGTTGTCTCAACTCTCAAGTGCATTTGTGAATTTTGACAACTCATTGGCTAAATGTTGTGCTTTGATCATTGTATGTAACCTATTTCGTGAGATTCAACTGATTCTGTGAAAGGTTTGGCTGTTATAGGATCTCAATTGTTAATGGGACTGTTGACATGTGTTCAAGGAATGAATAGTGTTTTTTGTTATTTTCTGTGTACATGCAGATATGGGGCTATTCTTACTCATCTGCAGGACAGGCCGGACCTTATAGAAAGGATTAAAGGATGTGTTGTTGATTCCGGAGGGGACCCTGAACTAAATCCTAAGGTAATTGTATATGTTTATCAACTTGTTATCAGATATGCTTGAAGTTCTATTGTCAATTATTTTGCTTCAAGATACAATGAAATTTAGTCATAAGAAAATGTTCTTGTCTAGCCTTTTATTGTCTATTACTTCGTATAGAATAGCATGGTGTGCATAAGGATGACAAAAGGTTCCTGAGCATTCTCGCGTAGTCGTGTGTCACAAATTTTGCATCCCTATATCCTATATTGGTCTGGGCCAAACGTTTAGAGTTTGCTTCCATTAGGGGTTGTGCTTATCAATGACACTGTGAAAGTGTGTAGCCCTTAATTCTCGCTGATTCCGGATTAAACAGGTAAAGAAGGTTGTTATCTTGTGGGTGGTTTTCACCTATGTGTCTGAGACTTGGTGTTATATCTTATATGGTACTTATCAAGACAGGATCTTAAAGTCACTTTCTAGACCAAGTCTTGAATCTGTAGAAACCTACTGATATTTGAGAGGGATTGATGTACCATCTCCTTTTCCTGACATTGGATCTGAAAATATGCCTGGCTAGTATATGGTTAACACATTGGCTCACTGGCTCACAAGTGGCCATGATGTGGCAGCGAATGGTCTACTTATAAATAAGTAAATAACTAACTTACCGAGTTTTTTTAATACTTCAGTTTGGACTTTGGATTTTAGTACAATCCAAGGTTGTAATGGCGTATGGGTGTATGTTCTGGGTTTATTAGTTATATTAGGAGTTTTTTTTTATAATTTAGTTATTATCTTTTTATTTAGTTAAAACATTCTAGAACTTCAACCCGTATTAGGGCACCTGGCCAATTGCCACGTATCTGTCAGTGCTAAGCTATTGATCTGAAGTGTGGTGGCAGCCATAAAGGTGGTACCCAATGCAGAAGGCTCTCGCTATTTAACTCAGGGTCTAGGAAAGGTCCAAATGTACGCAATATTACCCTTATTTTCATAAAGAGATTGTTTCTAGGGATTGAACTCGTGGCCTAACCGATTGCAAGTAGACACTTGACCATTGTGCTAAGCCACAACGTGTTGAGCATAAATAAAGCTTGGACCGAAGCAATCCTGTATCGCTTACAAGCTGGCTTGGTTCATATTCTAGGCAACACTGGCTTACACGCTTTCAAATTCGTTTCTGTAACAGGACGAATTTAAAAACAAATACGGCATTATCCCAGACTCTCTTGTACACTAGGGTCTAGACTTCCGTACCATCTTAAAAGTACTTTTAAATGGTGATGTTGAGTGAACGTGTCTGCTATGAATTAGCATAGATAACAGACCATAAATCAAGAGACTAATGAAGATTTGATTAATAAACTGAAAATACAAGAAGTAACTGATATTCAAGCATTCGAGAGGCTTGATTTCTCTCCCAATGAGCTCTTAAAAGCTCAACCAAATTCCTCAACAATATTCAACATGCCCCTCCCTGTCAAAATAACCACTGTATATATAGTACTACTTCCCTAACTACCCCCTGACTTATTCCCCAGACACCCCTTCTAACTTATAAAGCTATTTCCTGAACTACCCCTCTCCATAATATCAGTTCATTGCATTACACCCCTACTAACTTATAAAGCTATTTCCTGAACTACCCCTCTCCATAATATCAGTTCATTGCAGTGTCCCTGATGACTAGAGTGCTTGTTTACAACTCTCTTATAGGGTGTCCTTCCATATTTGAGACTTTGCTCTTGTGTTTCAAGCTTTTTTAATAAAAAAATGGAGCTTTATTACATTACTCTTTCTCCAAGAAATAAGTATGAGGTAATCAATAATTGTTATTTGTGATAGGGAGATAGTGTGGCTCACCCCTAACACTGTTATCCCCTGTCACTTTAATCCCCTTAATATTTTGAGAGAAAGAATACATCTTGACCAGAGAGCAGTTCTCAGATTTCCAGTGCTTGAAATTTCGTTGTCAATTATTTTGCTTTGAGAGGCAATGTAATGTAGTATAAGCAAATTTTATTCAAAGTTTTGGTGGGTAGTTCTTGTCTTGTCTTTTGTTGTCTATTACTTTGTATGGAATAGCAAGGTGTGCATACAAGGATGACAAAATGTTCCTAAAGATTCTGGTGTGTGCCAACTTTCGCATCCCTACAATCCTATATTGATCTGGGGCAAAATTTTGGAAAGTGATTCCATGAGGGTTTGTCTTATTAACGACACTGTGAAAGCCTGAATTCTCTTTGATTTAGATTAAACGGATAAAAGAAGGTTATTTATCTTTTGGGTGGAATTCACCTATGTGTCTGAGACATGGTGTTATATTGAACCTACCAATACAAAAGGTTAAAGTGTTAGTCGCCTTGTGGAGTATCTCTTGGATCTGTAGAGACCTATTGATATTTGAGAGGGATTGAAGTACCATCTCTTTTTCCTGATATTGAATACCTGACTAATCCTCCTAGGATACTCTGACTAGTTTATGGTTAGAACATTGGCTCACAAGTGGCCACCTGGCTGACTGCCATATATTTGTCAATGCTAAGCTATTTATATGAATTGTAGCGACAGCCATGTTGAGCATAAACCAAGCTTAGACCGAAGTTATACTGCATGGCTCACTAGCTGGGTTGGTTCATATTCAAGTTGACCCCGGTCTACATGCTTCAAATGTGTTTTCCTGTTACAAGACACCTCATTAAAAATAAGTATGGCGTAATCCCAGTATCTCTTCTAAACTAGGTCTAGACTTTTGTAAAGTCTTAAAAGTGCTTTAAAATGAGATGTTGAATGGGTGACCCTGATGACTTAGAGTGCTTGTTTACAGCTCTCTTATAGGGTGTCTTGCCGTAGTTGAGAGTTAGAGACTTTTCTCGTGTTTCAACTGATAAAGTGATAATAGGAGTTTGAGCTCCATTTCATTACTCTATTCTAAGAAATAAGCTATTGGATATTCGAGATGTGTTATCTGTATGTGGAGATGGTGTGGCTGTGGCTCCCGCCTCTAATTCTTCTCCCCTGTTACTCTAGTTCTTTTAATTTTTAAGATAGAGAATACACATCATGACCAACTAGTAGTAGCTCTCTGATTTCCAGTGAGATCTTATCAGCCAAAATGCCTGGGAAGGTTTTCAATAGCTTCTGAAGCTGGAAAAAGATGAACCCATTCCTTGTCTCCTTGGAACTGGAAACCTATGTTACTCGGACTCAAGTACTAGTGTTGGACACGGGTACGTGTTCAACTCGACTAAATTGTGGAAAAAATTTCCATGATTTTAGACCAAATGAAGTGTCAGAGTGTCCATACCTATATCCGAATGTTGAGGATCCGACACGGGTATTTGAGGTAAAACGAAGAGTCTGAGTAAATATAGCTTGAAACGTAGTAAAGTAAATTTTTCTCATGATTTTCATGGAAAAACTGAACACAGAAAGTTGCATGACCGTCTGTAAGTTTCACTTATTGAGATATTTAAATTTTCCATTAGAATAATGTCTCAAATGGGAATTTATCTTGAAGGTGTTTATAGGACTCACATACTTTCATATCCCTTCGCAGGTTTGGGCAGCTGGTTTTACTGCTGCTTTGCTGAAGAAACGGAATAATGTCATGCCTCTATCATCTGAGGATGTGGAACCACGTACTGATAAAAACAAGTCAAATATGCAGGATGAAGACCCTCTCTTAATCGAGGCTTTAGTTTTTGGAGCTTTGGAGAAAATGTTTTCCTTCCTTTTTACGTTACCTGATGTCAACCAGTAAGTATTGCACATCATTCAACTTGTTAAAATTCCTGTTGTTTCACGGGGTGATTCCTTATCAATAACGGTTATCGATGAATAGTACAAATCACATGGCAAAATCGTAAGTAAGATAGACTTTCAATATATACATATAACTTCAATTTTTATTCATTTAAGCACACATTATATTCTGTTAACCTCGTATTTATTCATTTAATTCACCTTTTACGTTTCTTTTTTTATTTCCACCTTTTTTTAGTTTTCCTACCTGTTTATTTACGGAAATGTCATGTTATTTGCACTATTCACAAATAACTTTTCCTCGTTTCATGTCTTCAAAGCCAGACTGAATGAATATTTTGGTTTTTTTTTTTTAAAAAAAATTAGGAGATTGTTGAAGATCATCCATCATCTTTCGGATAATCAGCCACCATGTCCTCAGCTTTACCTGTACAGCACAGAAGATAAGGTTATCCCGTACCGGTCAGTAGAATCTTTTATCAAACACCAAAAGTCGAAGGGAAGAAGCGTCTCGTCCTTTAACTTTAAGTCTTCACCTCATGTAGATCATTACAGGACATTTCCTGATGTATATACTTCACAGGTTAACAGTTTCTTGAATCACATTTCAAGCAAACACATGTAATTTTTGTTGGCAGATTTTGGTTCAGTGTTGTGTGAGATTGGACTGAAGATAGTCAAGATACAAGCACATAACATTGATGGCACCAGCATTTTGCAATGCAATCTAGTTTAGCAACGGAAACTTCGAATTCTTACATCGGTGTTTGAATTAAGGTTTGTGTCGGAAGTTCGAAACTGTTATTTATATTCTTTCTTTATTGATGTAATTGCAAGTTGCTGAAGAATTGGTTTTGAGATCAAGTTTGTAATTGCAAGTTGCCCACAAATTTTTGTTCCTTCCCAGAGATCTGTTTACTACTCCGTATGTTGTGTATGATTGTATGAACTTTCCAACAGTGACCAGTATGTGATGTTTCGTTGGATCAGATCCATATCTATTTCTTAGTAAAGATGGTTGTGGTGTGGGCTGGGTTGTGGGCCTAAATCTAAATAGGCCAAGCCCATTTGTAACTTCTTGGACCCGGCCGGGCCAAAATATAAAAATTGGGTCA GTCAAGTCAAATGTAGTTGAAGTATCCATTAACCAGAGCTAAAAGTGGCAATTAGTCAATTACAACATCTCCATTCATCATCATCTCCTTCGAACACCAGAAATCATGAAACAAAACTTGATGCAGAAATCAATGGAAGCCCCAATGCGAATTCTAAACCCTAACCATCTCAACTTGAATTTCAATCGTCAATTATCCCCCAAATTCTTCCCCAATTCTCACTCTCTTTCTCTCATTCCCACTCTCAAATCCCGCTACTGCATTTCTCTCTCCTCAAATTCCTTCAACAATGCCACTTCCCGTCCCTTCTCTTTCCCGAATTCCTCCCAATTAGGGTTTCTCCTTTCTCTCTCCTCCAATACTCAATTCCACTCCAACAATCTCAACCACCCCAAATCCCACCCTGACAACAGCAGATTCTTCAACTGGCACAAAGCTTCTGCGCCACTCGCCGGAGCTCCCGCCACCGTAGGAAAACCCGAGGTAGCGGCTGTGATATTGGGGTGGTTAGGAGCGACGCCGAAGCATTTGAGGAGGTATGCGGAGTTGTACACTTCGAGAGGGATTGATGCAATCACCTTTGTTGTTCCTGTTAGAGACGTGCTTTGGTTTGATTTGGGGAGAAAGGTTGAGAATCGGATTCAAGAGTTGACGAATGAGATTGTTTCATGGCTTTCGAAGGCGGAAGGCGGTGGCGGAAAGCGGTGCTTAATCTTTCACACATTCAGCAACACCGGTTGGCTTGTATATGGGGCTATTCTTACTCATCTGCAGGACAGGCCGGACCTTATAGAAAGGATTAAAGGATGTGTTGTTGATTCCGGAGGGGACCCTGAACTAAATCCTAAGGTTTGGGCAGCTGGTTTTACTGCTGCTTTGCTGAAGAAACGGAATAATGTCATGCCTCTATCATCTGAGGATGTGGAACCACGTACTGATAAAAACAAGTCAAATATGCAGGATGAAGACCCTCTCTTAATCGAGGCTTTAGTTTTTGGAGCTTTGGAGAAAATGTTTTCCTTCCTTTTTACGTTACCTGATGTCAACCAGAGATTGTTGAAGATCATCCATCATCTTTCGGATAATCAGCCACCATGTCCTCAGCTTTACCTGTACAGCACAGAAGATAAGGTTATCCCGTACCGGTCAGTAGAATCTTTTATCAAACACCAAAAGTCGAAGGGAAGAAGCGTCTCGTCCTTTAACTTTAAGTCTTCACCTCATGTAGATCATTACAGGACATTTCCTGATGTATATACTTCACAGGTTAACAGTTTCTTGAATCACATTTCAAGCAAACACATGTAATTTTTGTTGGCAGATTTTGGTTCAGTGTTGTGTGAGATTGGACTGAAGATAGTCAAGATACAAGCACATAACATTGATGGCACCAGCATTTTGCAATGCAATCTAGTTTAGCAACGGAAACTTCGAATTCTTACATCGGTGTTTGAATTAAGGTTTGTGTCGGAAGTTCGAAACTGTTATTTATATTCTTTCTTTATTGATGTAATTGCAAGTTGCTGAAGAATTGGTTTTGAGATCAAGTTTGTAATTGCAAGTTGCCCACAAATTTTTGTTCCTTCCCAGAGATCTGTTTACTACTCCGTATGTTGTGTATGATTGTATGAACTTTCCAACAGTGACCAGTATGTGATGTTTCGTTGGATCAGATCCATATCTATTTCTTAGTAAAGATGGTTGTGGTGTGGGCTGGGTTGTGGGCCTAAATCTAAATAGGCCAAGCCCATTTGTAACTTCTTGGACCCGGCCGGGCCAAAATATAAAAATTGGGTCA ATGAAACAAAACTTGATGCAGAAATCAATGGAAGCCCCAATGCGAATTCTAAACCCTAACCATCTCAACTTGAATTTCAATCGTCAATTATCCCCCAAATTCTTCCCCAATTCTCACTCTCTTTCTCTCATTCCCACTCTCAAATCCCGCTACTGCATTTCTCTCTCCTCAAATTCCTTCAACAATGCCACTTCCCGTCCCTTCTCTTTCCCGAATTCCTCCCAATTAGGGTTTCTCCTTTCTCTCTCCTCCAATACTCAATTCCACTCCAACAATCTCAACCACCCCAAATCCCACCCTGACAACAGCAGATTCTTCAACTGGCACAAAGCTTCTGCGCCACTCGCCGGAGCTCCCGCCACCGTAGGAAAACCCGAGGTAGCGGCTGTGATATTGGGGTGGTTAGGAGCGACGCCGAAGCATTTGAGGAGGTATGCGGAGTTGTACACTTCGAGAGGGATTGATGCAATCACCTTTGTTGTTCCTGTTAGAGACGTGCTTTGGTTTGATTTGGGGAGAAAGGTTGAGAATCGGATTCAAGAGTTGACGAATGAGATTGTTTCATGGCTTTCGAAGGCGGAAGGCGGTGGCGGAAAGCGGTGCTTAATCTTTCACACATTCAGCAACACCGGTTGGCTTGTATATGGGGCTATTCTTACTCATCTGCAGGACAGGCCGGACCTTATAGAAAGGATTAAAGGATGTGTTGTTGATTCCGGAGGGGACCCTGAACTAAATCCTAAGGTTTGGGCAGCTGGTTTTACTGCTGCTTTGCTGAAGAAACGGAATAATGTCATGCCTCTATCATCTGAGGATGTGGAACCACGTACTGATAAAAACAAGTCAAATATGCAGGATGAAGACCCTCTCTTAATCGAGGCTTTAGTTTTTGGAGCTTTGGAGAAAATGTTTTCCTTCCTTTTTACGTTACCTGATGTCAACCAGAGATTGTTGAAGATCATCCATCATCTTTCGGATAATCAGCCACCATGTCCTCAGCTTTACCTGTACAGCACAGAAGATAAGGTTATCCCGTACCGGTCAGTAGAATCTTTTATCAAACACCAAAAGTCGAAGGGAAGAAGCGTCTCGTCCTTTAACTTTAAGTCTTCACCTCATGTAGATCATTACAGGACATTTCCTGATGTATATACTTCACAGGTTAACAGTTTCTTGAATCACATTTCAAGCAAACACATGTAA MKQNLMQKSMEAPMRILNPNHLNLNFNRQLSPKFFPNSHSLSLIPTLKSRYCISLSSNSFNNATSRPFSFPNSSQLGFLLSLSSNTQFHSNNLNHPKSHPDNSRFFNWHKASAPLAGAPATVGKPEVAAVILGWLGATPKHLRRYAELYTSRGIDAITFVVPVRDVLWFDLGRKVENRIQELTNEIVSWLSKAEGGGGKRCLIFHTFSNTGWLVYGAILTHLQDRPDLIERIKGCVVDSGGDPELNPKVWAAGFTAALLKKRNNVMPLSSEDVEPRTDKNKSNMQDEDPLLIEALVFGALEKMFSFLFTLPDVNQRLLKIIHHLSDNQPPCPQLYLYSTEDKVIPYRSVESFIKHQKSKGRSVSSFNFKSSPHVDHYRTFPDVYTSQVNSFLNHISSKHM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo01496.1 vs. NCBI nr
Match: gi|902205306|gb|KNA15139.1| (hypothetical protein SOVF_100920 [Spinacia oleracea]) HSP 1 Score: 791.2 bits (2042), Expect = 8.500e-226 Identity = 389/391 (99.49%), Postives = 390/391 (99.74%), Query Frame = 1
BLAST of Spo01496.1 vs. NCBI nr
Match: gi|731337367|ref|XP_010679748.1| (PREDICTED: transmembrane protein 53 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 554.7 bits (1428), Expect = 1.300e-154 Identity = 288/396 (72.73%), Postives = 325/396 (82.07%), Query Frame = 1
BLAST of Spo01496.1 vs. NCBI nr
Match: gi|731387087|ref|XP_010649126.1| (PREDICTED: transmembrane protein 53 [Vitis vinifera]) HSP 1 Score: 377.5 bits (968), Expect = 2.900e-101 Identity = 212/408 (51.96%), Postives = 260/408 (63.73%), Query Frame = 1
BLAST of Spo01496.1 vs. NCBI nr
Match: gi|297735134|emb|CBI17496.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 374.4 bits (960), Expect = 2.500e-100 Identity = 208/396 (52.53%), Postives = 257/396 (64.90%), Query Frame = 1
BLAST of Spo01496.1 vs. NCBI nr
Match: gi|719975192|ref|XP_010246905.1| (PREDICTED: transmembrane protein 53 [Nelumbo nucifera]) HSP 1 Score: 373.6 bits (958), Expect = 4.200e-100 Identity = 216/423 (51.06%), Postives = 269/423 (63.59%), Query Frame = 1
BLAST of Spo01496.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R834_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_100920 PE=4 SV=1) HSP 1 Score: 791.2 bits (2042), Expect = 5.900e-226 Identity = 389/391 (99.49%), Postives = 390/391 (99.74%), Query Frame = 1
BLAST of Spo01496.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CB63_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g129030 PE=4 SV=1) HSP 1 Score: 554.7 bits (1428), Expect = 9.300e-155 Identity = 288/396 (72.73%), Postives = 325/396 (82.07%), Query Frame = 1
BLAST of Spo01496.1 vs. UniProtKB/TrEMBL
Match: F6GWV4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g02000 PE=4 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 2.000e-101 Identity = 212/408 (51.96%), Postives = 260/408 (63.73%), Query Frame = 1
BLAST of Spo01496.1 vs. UniProtKB/TrEMBL
Match: M0ZVY1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003604 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 4.900e-95 Identity = 207/397 (52.14%), Postives = 262/397 (65.99%), Query Frame = 1
BLAST of Spo01496.1 vs. UniProtKB/TrEMBL
Match: A0A0V0I5P7_SOLCH (Putative transmembrane protein 53-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 5.400e-94 Identity = 205/397 (51.64%), Postives = 260/397 (65.49%), Query Frame = 1
BLAST of Spo01496.1 vs. ExPASy Swiss-Prot
Match: TMM53_DANRE (Transmembrane protein 53 OS=Danio rerio GN=tmem53 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 6.300e-19 Identity = 75/279 (26.88%), Postives = 120/279 (43.01%), Query Frame = 1
BLAST of Spo01496.1 vs. ExPASy Swiss-Prot
Match: TMM53_MOUSE (Transmembrane protein 53 OS=Mus musculus GN=Tmem53 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.000e-16 Identity = 78/276 (28.26%), Postives = 119/276 (43.12%), Query Frame = 1
BLAST of Spo01496.1 vs. ExPASy Swiss-Prot
Match: TMM53_BOVIN (Transmembrane protein 53 OS=Bos taurus GN=TMEM53 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.700e-14 Identity = 76/269 (28.25%), Postives = 117/269 (43.49%), Query Frame = 1
BLAST of Spo01496.1 vs. TAIR (Arabidopsis)
Match: AT2G18245.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 317.4 bits (812), Expect = 1.300e-86 Identity = 173/347 (49.86%), Postives = 228/347 (65.71%), Query Frame = 1
BLAST of Spo01496.1 vs. TAIR (Arabidopsis)
Match: AT3G19970.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 246.1 bits (627), Expect = 3.600e-65 Identity = 126/300 (42.00%), Postives = 183/300 (61.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01496.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01496.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01496.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo01496.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|