Spo01514 (gene)

Overview
NameSpo01514
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01296 : 43564 .. 46186 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTCTTCAACGCCCCATCCCTGTTCTTTTCTCTCCATCAGAAAAATAAAATATAAAAAAAATACCGAAATTGGGAAACGAAAGAGGAAGGAATGATCAGGAATGGGCTTAAGCCAAAAATATTGTTAGCCCTATCTTCCTAACGGTGCTATAGGTTAGGACTACTTACGTGGGTCAACCTAATCCCCGCCTTATGTTTATAAAAAATTAAAAATGGAAATAAGTTAGCACTGTTTTCCTTTCTCCCAATCACATAAAAGATCATTATTTCATGTCACTTCATTTCATCTCCAAAGAAGCAAATCTGTAAGTCTTTGATAGACAGCTATGTATACGAGACTGTAATAAACGTGGTGGTCCTAAACTATCTAATAATTTCTATTCAGACACACATAAGGGTATAGAGAGAAGAGGGGGCACATAGAATGAATAATGGATCTCTATTTATAAGTAAGGTATTGTATATCCAATTCCTTCAATTCAAAATAACTCAGCCACCTAGCTAACAGAATGAAACATTCTTGCTTGATTCTATATTTCATCATTATTGCTACAACTTTCTGTTTCTTCACCAAATACACAGGTCTATGTTCGTCACCTCTTTTCAGTGCATCCTTTCCTACAAACAATCTACACGGACGAGCATCAAGGAGAGCTTTGAGCACACATCTCATTCAACATGAATCAGAAGCAGTTAAGGTCAGCTTATAAATAATTATCACATCTTATATGCCATCATCAAGTTAATATTTATCATTATTCACAAGACATACATCAAAATCGTGATAGTTTATATATTTCATCATTATTCACAAGATAGTTTAACATTGAAATCATGATAGTTGATATTTCATCATTATTCACGAGATAGTGTTACATCAAAATCATGATAAACACACAGGTTTTGAATGCAACTAAGCGTTCACCTCACCAAGTAGCATACAGAAGGGAAGAACCTGTGAAGAGCGGCATCGATGGTGATGAGGGAGAAGATGAATTAGTCTATCACATAGATTATCACGGTGTGACGACCCATCCTGGTTCAAATCCTAAACATGGAAAGCCATAAAACAGTCATCAGATCGTTTTTTATTCTTTTGAATATATGTAACATGATCTAGCTAATCAATGAGATGTAGTTGTTCTAATTTCATTTTACCACCTCGAACTTGAGTAAAAAAAAATGAGAGCATTGCAAACCTTACAAGCCTCAATCATGTCTATTCCGCTGTATCTTCAACACCTTATGCCATACCAAGATCTTTCAACATGAAGTAAATTAAAAATCCATTATAAAAAGATGCATCCTTCTGCAAAATATCAGACTAGAGATAGAAAGTAAATTTGATCAGCTCTCACCAGGCAAGTTTTCCTTTTAAACAGTAAGTACCACCATAATAAAATGTATGGAATAGCACAGTTGGAATAAAGCTGTGTTGCTCAACAGGAAACATCAGAGCTTGTGGAAGAGATAAATAAGCAAGACTGCAACAGTCAAGATACATATCTGTCTGGAAGGTAATGGTGAAACCAAAATCCAGGAAAAGAATGATTTGATATAATTTGATTGATTAATAATGTAAGGAAAGCATGCCGTTCATATATCGCATTCTGGCCTCCTTGTACAAGACATGCAAAGTTTTAAAGCTCTCTTTTGCATCATCAAAGAGAACTTCATTACAAAAATTCGACTTAACATGGGCAAATGCAGCCTCTGCATCTTCCTTGTGTTGATTTATAAACGACAAAGTTTCGCAAATTCCGTCTGAAGTAAAATAACAAAAATCCCGAGCGTATTCTTCTCTCCCACTGAGATGCTCGAGCCATCTGAGCCAATGAAAAGGATCATCGTCTCTCTCAACAGCCATTTGCAAAAATTCGAAAGAATCTGCAAAGCTGGATAGTTCACTTATTTTATCAGTGACTATATTGAAAATGGCTCTCTGGTTCTTGTCAAACCAGTTTTCAGTCCCTGTAGGCAAAGAACTCAAAGCAACCAAGCAAGCTTTCCGAAGCACGGGCTCAGCACTGCTAATAAGCTTGATTGCAACATGCAAAATATTCACAGAAATAGCTAACATCCCAGAAGCGTAACAAGCAATAGAATCAGGCCCTTTTTTCTGGATCCACTGATAAAGTGCAATATGCGCAAATCCTTCCCACCTGTTTTCATCAAAAGTTATCAACAGAAAGGGTAATCAGCAAACCTTAATGTCAATTAAGTTGGAACCTTGGAGGGTTAGAGGTTTACTCTGAAACCCAAGGACTTCATACCCAATGAAAAAAAAAGTTAGTAGTTAGCATGAAAGGAAATGATGGCAAGAATGTTAATGAAGGCAATGCTGAGATCAGTATCCAGGTTGTATTTAGAAAACCTAAGGGCTCAATAACTCGGGAAACGGAATAAAAATTAAATTCCGGGATCACTGGTGACTTGAAATGGAGGGGTACTTCAAATGATTGAGTAACAAGAAGATTAGAATTAGACTCAAACTATAAGCATGTGTTAATAAGACCAACATAGTGTAATGGTAAAGATAACTGGCTAAGAACTGTCTGTACCAGATCTGTAAGATTGTCATATTGAACTCAGGTACGAGGACATTACATTAAATATGTAGCCA

mRNA sequence

ACTCTTCAACGCCCCATCCCTGTTCTTTTCTCTCCATCAGAAAAATAAAATATAAAAAAAATACCGAAATTGGGAAACGAAAGAGGAAGGAATGATCAGGAATGGGCTTAAGCCAAAAATATTGTTAGCCCTATCTTCCTAACGGTGCTATAGGTTAGGACTACTTACGTGGGTCAACCTAATCCCCGCCTTATGTTTATAAAAAATTAAAAATGGAAATAAGTTAGCACTGTTTTCCTTTCTCCCAATCACATAAAAGATCATTATTTCATGTCACTTCATTTCATCTCCAAAGAAGCAAATCTGTAAGTCTTTGATAGACAGCTATGTATACGAGACTGTAATAAACGTGGTGGTCCTAAACTATCTAATAATTTCTATTCAGACACACATAAGGGTATAGAGAGAAGAGGGGGCACATAGAATGAATAATGGATCTCTATTTATAAGTAAGGTATTGTATATCCAATTCCTTCAATTCAAAATAACTCAGCCACCTAGCTAACAGAATGAAACATTCTTGCTTGATTCTATATTTCATCATTATTGCTACAACTTTCTGTTTCTTCACCAAATACACAGGTCTATGTTCGTCACCTCTTTTCAGTGCATCCTTTCCTACAAACAATCTACACGGACGAGCATCAAGGAGAGCTTTGAGCACACATCTCATTCAACATGAATCAGAAGCAGTTAAGGTTTTGAATGCAACTAAGCGTTCACCTCACCAAGTAGCATACAGAAGGGAAGAACCTGTGAAGAGCGGCATCGATGGTGATGAGGGAGAAGATGAATTAGTCTATCACATAGATTATCACGGTGTGACGACCCATCCTGGTTCAAATCCTAAACATGGAAAGCCATAAAACAGTCATCAGATCGTTTTTTATTCTTTTGAATATATGTAACATGATCTAGCTAATCAATGAGATGTAGTTGTTCTAATTTCATTTTACCACCTCGAACTTGAGTAAAAAAAAATGAGAGCATTGCAAACCTTACAAGCCTCAATCATGTCTATTCCGCTGTATCTTCAACACCTTATGCCATACCAAGATCTTTCAACATGAAGTAAATTAAAAATCCATTATAAAAAGATGCATCCTTCTGCAAAATATCAGACTAGAGATAGAAAGTAAATTTGATCAGCTCTCACCAGGCAAGTTTTCCTTTTAAACAGTAAGTACCACCATAATAAAATGTATGGAATAGCACAGTTGGAATAAAGCTGTGTTGCTCAACAGGAAACATCAGAGCTTGTGGAAGAGATAAATAAGCAAGACTGCAACAGTCAAGATACATATCTGTCTGGAAGGTAATGGTGAAACCAAAATCCAGGAAAAGAATGATTTGATATAATTTGATTGATTAATAATGTAAGGAAAGCATGCCGTTCATATATCGCATTCTGGCCTCCTTGTACAAGACATGCAAAGTTTTAAAGCTCTCTTTTGCATCATCAAAGAGAACTTCATTACAAAAATTCGACTTAACATGGGCAAATGCAGCCTCTGCATCTTCCTTGTGTTGATTTATAAACGACAAAGTTTCGCAAATTCCGTCTGAAGTAAAATAACAAAAATCCCGAGCGTATTCTTCTCTCCCACTGAGATGCTCGAGCCATCTGAGCCAATGAAAAGGATCATCGTCTCTCTCAACAGCCATTTGCAAAAATTCGAAAGAATCTGCAAAGCTGGATAGTTCACTTATTTTATCAGTGACTATATTGAAAATGGCTCTCTGGTTCTTGTCAAACCAGTTTTCAGTCCCTGTAGGCAAAGAACTCAAAGCAACCAAGCAAGCTTTCCGAAGCACGGGCTCAGCACTGCTAATAAGCTTGATTGCAACATGCAAAATATTCACAGAAATAGCTAACATCCCAGAAGCGTAACAAGCAATAGAATCAGGCCCTTTTTTCTGGATCCACTGATAAAGTGCAATATGCGCAAATCCTTCCCACCTGTTTTCATCAAAAGTTATCAACAGAAAGGGTAATCAGCAAACCTTAATGTCAATTAAGTTGGAACCTTGGAGGGTTAGAGGTTTACTCTGAAACCCAAGGACTTCATACCCAATGAAAAAAAAAGTTAGTAGTTAGCATGAAAGGAAATGATGGCAAGAATGTTAATGAAGGCAATGCTGAGATCAGTATCCAGGTTGTATTTAGAAAACCTAAGGGCTCAATAACTCGGGAAACGGAATAAAAATTAAATTCCGGGATCACTGGTGACTTGAAATGGAGGGGTACTTCAAATGATTGAGTAACAAGAAGATTAGAATTAGACTCAAACTATAAGCATGTGTTAATAAGACCAACATAGTGTAATGGTAAAGATAACTGGCTAAGAACTGTCTGTACCAGATCTGTAAGATTGTCATATTGAACTCAGGTACGAGGACATTACATTAAATATGTAGCCA

Coding sequence (CDS)

ATGAAACATTCTTGCTTGATTCTATATTTCATCATTATTGCTACAACTTTCTGTTTCTTCACCAAATACACAGGTCTATGTTCGTCACCTCTTTTCAGTGCATCCTTTCCTACAAACAATCTACACGGACGAGCATCAAGGAGAGCTTTGAGCACACATCTCATTCAACATGAATCAGAAGCAGTTAAGGTTTTGAATGCAACTAAGCGTTCACCTCACCAAGTAGCATACAGAAGGGAAGAACCTGTGAAGAGCGGCATCGATGGTGATGAGGGAGAAGATGAATTAGTCTATCACATAGATTATCACGGTGTGACGACCCATCCTGGTTCAAATCCTAAACATGGAAAGCCATAA

Protein sequence

MKHSCLILYFIIIATTFCFFTKYTGLCSSPLFSASFPTNNLHGRASRRALSTHLIQHESEAVKVLNATKRSPHQVAYRREEPVKSGIDGDEGEDELVYHIDYHGVTTHPGSNPKHGKP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01514.1Spo01514.1mRNA


Homology
[Close]
BLAST of Spo01514.1 vs. NCBI nr
Match: gi|902225627|gb|KNA20131.1| (hypothetical protein SOVF_054620 [Spinacia oleracea])

HSP 1 Score: 240.4 bits (612), Expect = 1.600e-60
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 1 

		  

Query: 1   MKHSCLILYFIIIATTFCFFTKYTGLCSSPLFSASFPTNNLHGRASRRALSTHLIQHESE 60
           MKHSCLILYFIIIATTFCFFTKYTGLCSSPLFSASFPTNNLHGRASRRALSTHLIQHESE
Sbjct: 1   MKHSCLILYFIIIATTFCFFTKYTGLCSSPLFSASFPTNNLHGRASRRALSTHLIQHESE 60

Query: 61  AVKVLNATKRSPHQVAYRREEPVKSGIDGDEGEDELVYHIDYHGVTTHPGSNPKHGKP 119
           AVKVL+ATKRSPHQVAYRREEPVKSGIDGDEGEDELVYHIDYHGVTTHPGSNPKHGKP
Sbjct: 61  AVKVLDATKRSPHQVAYRREEPVKSGIDGDEGEDELVYHIDYHGVTTHPGSNPKHGKP 118
[Close]
BLAST of Spo01514.1 vs. NCBI nr
Match: gi|870851641|gb|KMT03673.1| (hypothetical protein BVRB_8g190110 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 153.7 bits (387), Expect = 2.000e-34
Identity = 80/119 (67.23%), Postives = 90/119 (75.63%), Query Frame = 1 

		  

Query: 1   MKHSCLILYFIIIATTFCFFTKYTGLCSSPLFSASF-PTNNLHGRASRRALSTHLIQHES 60
           MKHS +ILYF II TT C F +YTGLCSSPL   SF PTNN +  A RRALSTH+ +H  
Sbjct: 1   MKHSGIILYFTII-TTLCLFIRYTGLCSSPLSCVSFSPTNNFNRIAVRRALSTHITEHVK 60

Query: 61  EAVKVLNATKRSPHQVAYRREEPVKSGIDGDEGEDELVYHIDYHGVTTHPGSNPKHGKP 119
           E VKV +  K SP + AYRREE VKSGI+GD+ EDEL+YHIDYHGVTTHP   PKHGKP
Sbjct: 61  EQVKVFHGMKHSPQEHAYRREELVKSGINGDDAEDELMYHIDYHGVTTHPSPTPKHGKP 118
[Close]
BLAST of Spo01514.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKU9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054620 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.100e-60
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 1 

		  

Query: 1   MKHSCLILYFIIIATTFCFFTKYTGLCSSPLFSASFPTNNLHGRASRRALSTHLIQHESE 60
           MKHSCLILYFIIIATTFCFFTKYTGLCSSPLFSASFPTNNLHGRASRRALSTHLIQHESE
Sbjct: 1   MKHSCLILYFIIIATTFCFFTKYTGLCSSPLFSASFPTNNLHGRASRRALSTHLIQHESE 60

Query: 61  AVKVLNATKRSPHQVAYRREEPVKSGIDGDEGEDELVYHIDYHGVTTHPGSNPKHGKP 119
           AVKVL+ATKRSPHQVAYRREEPVKSGIDGDEGEDELVYHIDYHGVTTHPGSNPKHGKP
Sbjct: 61  AVKVLDATKRSPHQVAYRREEPVKSGIDGDEGEDELVYHIDYHGVTTHPGSNPKHGKP 118
[Close]
BLAST of Spo01514.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUS8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g190110 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.400e-34
Identity = 80/119 (67.23%), Postives = 90/119 (75.63%), Query Frame = 1 

		  

Query: 1   MKHSCLILYFIIIATTFCFFTKYTGLCSSPLFSASF-PTNNLHGRASRRALSTHLIQHES 60
           MKHS +ILYF II TT C F +YTGLCSSPL   SF PTNN +  A RRALSTH+ +H  
Sbjct: 1   MKHSGIILYFTII-TTLCLFIRYTGLCSSPLSCVSFSPTNNFNRIAVRRALSTHITEHVK 60

Query: 61  EAVKVLNATKRSPHQVAYRREEPVKSGIDGDEGEDELVYHIDYHGVTTHPGSNPKHGKP 119
           E VKV +  K SP + AYRREE VKSGI+GD+ EDEL+YHIDYHGVTTHP   PKHGKP
Sbjct: 61  EQVKVFHGMKHSPQEHAYRREELVKSGINGDDAEDELMYHIDYHGVTTHPSPTPKHGKP 118
The following BLAST results are available for this feature:
BLAST of Spo01514.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 2
Match NameE-valueIdentityDescription
gi|902225627|gb|KNA20131.1|1.6e-6099.1hypothetical protein SOVF_0546... [more]
gi|870851641|gb|KMT03673.1|2.0e-3467.2hypothetical protein BVRB_8g19... [more]
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BLAST of Spo01514.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0K9RKU9_SPIOL1.1e-6099.1Uncharacterized protein OS=Spi... [more]
A0A0J8BUS8_BETVU1.4e-3467.2Uncharacterized protein OS=Bet... [more]
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BLAST of Spo01514.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01514.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0033358 UDP-L-arabinose biosynthetic process
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0007031 peroxisome organization
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006508 proteolysis
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0045227 capsule polysaccharide biosynthetic process
biological_process GO:0071555 cell wall organization
biological_process GO:0006012 galactose metabolic process
biological_process GO:0006635 fatty acid beta-oxidation
cellular_component GO:0000419 DNA-directed RNA polymerase V complex
cellular_component GO:0000418 DNA-directed RNA polymerase IV complex
cellular_component GO:0005666 DNA-directed RNA polymerase III complex
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
cellular_component GO:0005736 DNA-directed RNA polymerase I complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005778 peroxisomal membrane
molecular_function GO:0050373 UDP-arabinose 4-epimerase activity
molecular_function GO:0003978 UDP-glucose 4-epimerase activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0001054 RNA polymerase I activity
molecular_function GO:0001055 RNA polymerase II activity
molecular_function GO:0001056 RNA polymerase III activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo007480.77Barchart | Table
Spo189970.77Barchart | Table
Spo142950.75Barchart | Table
Spo051950.75Barchart | Table
Spo268990.75Barchart | Table
Spo036100.75Barchart | Table
Spo041290.74Barchart | Table
Spo238520.74Barchart | Table
Spo205620.74Barchart | Table
Spo166480.73Barchart | Table
Spo135830.73Barchart | Table
Spo260130.73Barchart | Table
Spo248180.73Barchart | Table
Spo243310.73Barchart | Table
Spo271650.73Barchart | Table
Spo084940.72Barchart | Table
Spo142940.72Barchart | Table
Spo242690.72Barchart | Table
Spo240400.72Barchart | Table
Spo224360.72Barchart | Table
Spo036300.72Barchart | Table
Spo213620.72Barchart | Table
Spo201740.72Barchart | Table
Spo076460.71Barchart | Table
Spo273520.71Barchart | Table
Spo177130.71Barchart | Table
Spo072150.71Barchart | Table
Spo215250.71Barchart | Table
Spo154990.71Barchart | Table
Spo087250.71Barchart | Table
Spo031840.71Barchart | Table
Spo224030.71Barchart | Table
Spo024540.71Barchart | Table
Spo071810.71Barchart | Table
Spo169360.70Barchart | Table
Spo018760.70Barchart | Table
Spo016290.70Barchart | Table
Spo108640.70Barchart | Table
Spo253070.70Barchart | Table
Spo202640.70Barchart | Table
Spo264960.70Barchart | Table
Spo173330.70Barchart | Table
Spo143830.70Barchart | Table
Spo131840.70Barchart | Table
Spo165870.69Barchart | Table
Spo002470.69Barchart | Table
Spo003960.69Barchart | Table
Spo057810.69Barchart | Table
Spo077860.69Barchart | Table
Spo085210.69Barchart | Table
Spo131710.69Barchart | Table
Spo134990.69Barchart | Table
Spo146670.69Barchart | Table
Spo223970.69Barchart | Table
Spo249400.69Barchart | Table
Spo253500.69Barchart | Table
Spo104440.68Barchart | Table
Spo005260.68Barchart | Table
Spo227720.68Barchart | Table
Spo123690.68Barchart | Table
Spo093160.68Barchart | Table
Spo084190.68Barchart | Table
Spo185890.68Barchart | Table
Spo075570.68Barchart | Table
Spo074080.68Barchart | Table
Spo140710.68Barchart | Table
Spo101710.67Barchart | Table
Spo075150.67Barchart | Table
Spo002830.67Barchart | Table
Spo192170.67Barchart | Table
Spo173380.67Barchart | Table
Spo161900.67Barchart | Table
Spo253200.67Barchart | Table
Spo121450.67Barchart | Table
Spo096360.67Barchart | Table
Spo007220.67Barchart | Table
Spo184750.67Barchart | Table
Spo013520.67Barchart | Table
Spo233820.67Barchart | Table
Spo017920.67Barchart | Table
Spo094340.66Barchart | Table
Spo003980.66Barchart | Table
Spo139450.66Barchart | Table
Spo093440.66Barchart | Table
Spo082450.66Barchart | Table
Spo069190.66Barchart | Table
Spo060220.66Barchart | Table
Spo054050.66Barchart | Table
Spo270310.66Barchart | Table
Spo024810.66Barchart | Table
Spo007820.66Barchart | Table
Spo007080.66Barchart | Table
Spo121720.66Barchart | Table
Spo001900.65Barchart | Table
Spo003620.65Barchart | Table
Spo249930.65Barchart | Table
Spo024060.65Barchart | Table
Spo220330.65Barchart | Table
Spo206160.65Barchart | Table
Spo168010.65Barchart | Table
Spo165840.65Barchart | Table
Spo139050.65Barchart | Table
Spo024050.65Barchart | Table
Spo229980.65Barchart | Table
Spo012910.65Barchart | Table