Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCTAATTTTGCTAATGTTAGTGTTATGTGCTTGGCAATTGCTATCCACATTCTTCATCAACTCACTATAAATATCAATCATTTCACTATGAATCATTTCCCTATGAATCATTTCACTACTCCGTAATAGCTTCTCGAGAATAGAATTTGACCGTGTTAGAATTTGTATCACCGTAGCCAATTCATATTTTAGACGTGTGTCAAAACCTTCCTCGACTTTAATTAAATTAAAAACTTTTCTAAAATAGTTTTCCTGTTTTCCTATTTTCCTATTTTCCTAGAATGAAGTACATCATAGAACAATTTTAACCCTTCAATTCACTTTCTATCAAATTCAAGTTCCTACAATCCCACTTTAAAATACTACCGATGAATAGAATAACATGACATTTGTATGAGATACTTCGTAGTTCTTCTGTATGATAAAAGTAACACCTTTCAATAATTAAACATAATTAACATTTAAGTAAACAAAAAAAAGTAGCCGGTACTCAGTACTCAGTACTCATACACTCCCTCCCATAAAGCTTTCATCTTTCCCTACAAAACCCACTCCCCTCATTCCTTCTCTCTCAAAAACACCTCACTCACGCTCAATCATTTCACCATTTTCTAGACCAATTCAGAGTTTTCTAGAGAGAGAAACTAGGGAGAGAAAATGGAGGGGAAAGAAGAGGATGTAAGACTAGGAGCAAACAAGTACTCAGAAAGGCAACCATTGGGAACATCAGCACAGTCAAAAGACTACAAAGAGGCACCACCAGCACCATTGTTTGAGCCAGGAGAGCTGCAATCATGGTCTTTTTGGAGGGCTGGAATTGCTGAGTTTATGGCAACTTTCTTGTTCCTTTACATAACTATTTTAACTGTCATGGGTGTTAAAAGAGCTCCCAATATGTGTGCTTCTGTTGGTATTCAAGGCATTGCTTGGGCTTTTGGTGGTATGATCTTTGCTCTTGTTTACTGCACTGCTGGTATTTCAGGTCACTTCTCTTTCTCTTCTGTTTTTTTTTCTATTTTTTGCTGCTTTTTTTTTTTTTTGTTTTCTGCTTTTTTTGGAGTTGTTTTTGTTCTTATATCTTGCAGTTACTTCTGGGTTTTTCTGAATTTAGGTTTTAAGAATGTCGTTCTAAGAAAAATTCAATCTTTTTAAAGAATGAAGACCTGTTTTGTCCTATTCCTTTTGGGTTTATTTCTTGGCTTCTTGCATTTGAGCTTCTAGCTTTAGAACATTTTCTGGGCTTAATTTTCTGTATTTAGGGTTTGTTTTCCTGTTAACTGTAAGTAATCAAGTAAATGTTCAAATCTTGGTTACTATAATACTAATGTTTAGCTGAATCTGAACAGGTGGTCACATAAATCCAGCAGTAACATTTGGACTGTTATTAGCAAGGAAACTGTCCTTAACAAGGGCAATGTTTTACATGATAATGCAATGTTTAGGAGCCATATGTGGTGCTGGTGTGGTAAAAGGTTTCCAACCAAACATATATGAAATGCAAGGTGGTGGTGCCAATGTGGTTAACCATGGTTACACCAAAGGTGATGGTCTTGGTGCTGAGATTATTGGTACCTTTGTCCTTGTCTACACTGTTTTCTCTGCTACTGATGCTAAGAGGAGTGCTAGAGACTCCCATGTTCCTGTAAGCTACTCTTTCTCTCTCTTCCATATCATTCCCATTATTTTCTAGTTACTCCCTTAGTTTATGCATACATTTGATGTGTTTTTAGTGATTTTGTCTAGATTTGGTTATTAACCATGGTTAACCAACTAATTTGATGTGTTTTAGTGTTTACCTTATTCCTTGAAGAGTTACTTATAATTAAAAGCATGATTAAATGTGATAGTTATCTTATTAAGTATGTGTACATGATTGAAGTGTTGTCGATCTGCTTAATCCCTAAATGATGCACTTGTAATGTGCATTGTGCAATGAAGATTCTTGGGAACGATGATTTTTTTAGGATAAAAATATAGTCAAGTGAGATCTTGTTAGATTCATCCCAACGCGTGTTTTTAACATATCAACTTTTTATATTTTTTGCTTAAATAGAATTGAAGATACAAAATGATCAAAGTTGTGTATCGGCATGCATGAAAGTGACCAATGTTGCGAGTAAAAATAAACGAAAAGAGTATTTCTCATATTTTGATGGGCTTGTAATACGGTAGCACATCTAGTGCCAAGGTGGTAGACTAGTGTCAAGTGATAATGTATACTCCCTATGTCCCTTAATACTCGACCTGTTTTGACCAGACACGTTTGCCAATGCACAACTTTGACCACCAATTTCTTTAACTACATATTATAAAAACTTATAAAAATATTAATATTTTGAAGATATATACTCCCTCCGTCCCGGAATACTCGCAACGATTTGGCTTGACACGCTTGTCGATGTACAACTTTGACCATCAATATCTTCAATTATATATTATAAAAACTCATAAAATATTAATATTTTGAAAATATATATTAAGATGAAGCCAACAATATAAATAAAATAGGGTCAAAGTGGATTATATGAATAGTGCAAAAAGTCAAACCGTTGCGAGTACTCCGGGACGGAGGGAGTATTAAGATGAAGCCAACAATATATTATATACTAACATTTGTTTTCACATACTAGAAATAAAATAGGGTCAAAGTAAATTATGTGAATAGTGCAAAAAGTCAAAACGGATCGAGTATTAAGGGACGGAGGGAGTAACATATACTTCTTATGATATATGCCTTGGTTTTTTCCCGCAAAGCTTAATCACTTTGGCAGGAATTGATTTCCAGTAAAAAAAAAAATCCCACTCTAGAGAAAAAAAAAAAAAAAAAAAAAAATTGCAGATTCCAGTGGTATACATTGGATTTCTAGGGTAAATCGAGTTGTTACTTGTTAGTTGAGATGAGATTGCAGTGATATAAATTGGATATGATCATGTTTGCTGTACAACCTGAATTTATATCAGGGGTAGAAAATTAAATGTGAACATCAGGGTCCTGAATTGTTCTGACTAATTCTTTTTCCTACAACAAAATAATGGTAACTTATAGTACTCTTGTTGACTGTTATAAATGCAGATATTGGCGCCACTGCCTATCGGATTTGCGGTGTTCCTGGTTCACTTGGCCACCATCCCCATCACAGGTACCGGAATCAACCCAGCCAGGAGTCTGGGTGCTGCTATTATCTTCAACAAGGACCATGCTTGGGATCATCATGTATGTCTTATACAGTTATACTCTTATAGTCTTATGTCTTGATCATTCTATTGCATGCATTACTCTAAAAGACCTTGTTGTTTGTTTGTTTGTTTGTGCAGTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCTTTAGCTGCATTATACCACCAGACTGTGATCAGGGCTATTCCATTCAAGTCTCGATCTTAAAAGACCCATGTTTCCAGACTGTCTGATGCTGTTTATGCTTGTGTTTTAAGTCTGAAGTATTATTTAAGTTTTAAGTTCTGATGTTTTGTAGTGAAGTTTGTATGAGGATTGAGGATGTGCATATGTTAACTTGATTTATTATGCTTAGCTTCTAAATATGGAATTCGACATAACCTTCGGGCGTGCTTTCGTCCATGTATGATCTATCTTTAGACAAAGTTCTGATCCTATTCACATCATGAGTTAAATTAGTGATCCTTATTTTAAGAACCATAATTAGCATATGCAAATCCCAGAATTTACATCACCCATTAAACATCAACAACCAACACCTAGTTACAACAAACCAGCAAACAACTCTCTGTGCTTATAGCTTACTTTCTTTCCTATATTCTTTTTTATTCTATTTTTTACACAAATTTGAATATTTTGTACAATTTTTTGAATGGTGGGAACCGTCAAT AGCTAATTTTGCTAATGTTAGTGTTATGTGCTTGGCAATTGCTATCCACATTCTTCATCAACTCACTATAAATATCAATCATTTCACTATGAATCATTTCCCTATGAATCATTTCACTACTCCGTAATAGCTTCTCGAGAATAGAATTTGACCGTGTTAGAATTTGTATCACCGTAGCCAATTCATATTTTAGACGTGTGTCAAAACCTTCCTCGACTTTAATTAAATTAAAAACTTTTCTAAAATAGTTTTCCTGTTTTCCTATTTTCCTATTTTCCTAGAATGAAGTACATCATAGAACAATTTTAACCCTTCAATTCACTTTCTATCAAATTCAAGTTCCTACAATCCCACTTTAAAATACTACCGATGAATAGAATAACATGACATTTGTATGAGATACTTCGTAGTTCTTCTGTATGATAAAAGTAACACCTTTCAATAATTAAACATAATTAACATTTAAGTAAACAAAAAAAAGTAGCCGGTACTCAGTACTCAGTACTCATACACTCCCTCCCATAAAGCTTTCATCTTTCCCTACAAAACCCACTCCCCTCATTCCTTCTCTCTCAAAAACACCTCACTCACGCTCAATCATTTCACCATTTTCTAGACCAATTCAGAGTTTTCTAGAGAGAGAAACTAGGGAGAGAAAATGGAGGGGAAAGAAGAGGATGTAAGACTAGGAGCAAACAAGTACTCAGAAAGGCAACCATTGGGAACATCAGCACAGTCAAAAGACTACAAAGAGGCACCACCAGCACCATTGTTTGAGCCAGGAGAGCTGCAATCATGGTCTTTTTGGAGGGCTGGAATTGCTGAGTTTATGGCAACTTTCTTGTTCCTTTACATAACTATTTTAACTGTCATGGGTGTTAAAAGAGCTCCCAATATGTGTGCTTCTGTTGGTATTCAAGGCATTGCTTGGGCTTTTGGTGGTATGATCTTTGCTCTTGTTTACTGCACTGCTGGTATTTCAGGTGGTCACATAAATCCAGCAGTAACATTTGGACTGTTATTAGCAAGGAAACTGTCCTTAACAAGGGCAATGTTTTACATGATAATGCAATGTTTAGGAGCCATATGTGGTGCTGGTGTGGTAAAAGGTTTCCAACCAAACATATATGAAATGCAAGGTGGTGGTGCCAATGTGGTTAACCATGGTTACACCAAAGGTGATGGTCTTGGTGCTGAGATTATTGGTACCTTTGTCCTTGTCTACACTGTTTTCTCTGCTACTGATGCTAAGAGGAGTGCTAGAGACTCCCATGTTCCTATATTGGCGCCACTGCCTATCGGATTTGCGGTGTTCCTGGTTCACTTGGCCACCATCCCCATCACAGGTACCGGAATCAACCCAGCCAGGAGTCTGGGTGCTGCTATTATCTTCAACAAGGACCATGCTTGGGATCATCATTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCTTTAGCTGCATTATACCACCAGACTGTGATCAGGGCTATTCCATTCAAGTCTCGATCTTAAAAGACCCATGTTTCCAGACTGTCTGATGCTGTTTATGCTTGTGTTTTAAGTCTGAAGTATTATTTAAGTTTTAAGTTCTGATGTTTTGTAGTGAAGTTTGTATGAGGATTGAGGATGTGCATATGTTAACTTGATTTATTATGCTTAGCTTCTAAATATGGAATTCGACATAACCTTCGGGCGTGCTTTCGTCCATGTATGATCTATCTTTAGACAAAGTTCTGATCCTATTCACATCATGAGTTAAATTAGTGATCCTTATTTTAAGAACCATAATTAGCATATGCAAATCCCAGAATTTACATCACCCATTAAACATCAACAACCAACACCTAGTTACAACAAACCAGCAAACAACTCTCTGTGCTTATAGCTTACTTTCTTTCCTATATTCTTTTTTATTCTATTTTTTACACAAATTTGAATATTTTGTACAATTTTTTGAATGGTGGGAACCGTCAAT ATGGAGGGGAAAGAAGAGGATGTAAGACTAGGAGCAAACAAGTACTCAGAAAGGCAACCATTGGGAACATCAGCACAGTCAAAAGACTACAAAGAGGCACCACCAGCACCATTGTTTGAGCCAGGAGAGCTGCAATCATGGTCTTTTTGGAGGGCTGGAATTGCTGAGTTTATGGCAACTTTCTTGTTCCTTTACATAACTATTTTAACTGTCATGGGTGTTAAAAGAGCTCCCAATATGTGTGCTTCTGTTGGTATTCAAGGCATTGCTTGGGCTTTTGGTGGTATGATCTTTGCTCTTGTTTACTGCACTGCTGGTATTTCAGGTGGTCACATAAATCCAGCAGTAACATTTGGACTGTTATTAGCAAGGAAACTGTCCTTAACAAGGGCAATGTTTTACATGATAATGCAATGTTTAGGAGCCATATGTGGTGCTGGTGTGGTAAAAGGTTTCCAACCAAACATATATGAAATGCAAGGTGGTGGTGCCAATGTGGTTAACCATGGTTACACCAAAGGTGATGGTCTTGGTGCTGAGATTATTGGTACCTTTGTCCTTGTCTACACTGTTTTCTCTGCTACTGATGCTAAGAGGAGTGCTAGAGACTCCCATGTTCCTATATTGGCGCCACTGCCTATCGGATTTGCGGTGTTCCTGGTTCACTTGGCCACCATCCCCATCACAGGTACCGGAATCAACCCAGCCAGGAGTCTGGGTGCTGCTATTATCTTCAACAAGGACCATGCTTGGGATCATCATTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCTTTAGCTGCATTATACCACCAGACTGTGATCAGGGCTATTCCATTCAAGTCTCGATCTTAA MEGKEEDVRLGANKYSERQPLGTSAQSKDYKEAPPAPLFEPGELQSWSFWRAGIAEFMATFLFLYITILTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAMFYMIMQCLGAICGAGVVKGFQPNIYEMQGGGANVVNHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDHHWIFWVGPFIGAALAALYHQTVIRAIPFKSRS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo01582.1 vs. NCBI nr
Match: gi|902223487|gb|KNA19464.1| (hypothetical protein SOVF_061350 [Spinacia oleracea]) HSP 1 Score: 575.9 bits (1483), Expect = 4.000e-161 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of Spo01582.1 vs. NCBI nr
Match: gi|5912586|emb|CAB56217.1| (PM28B protein [Spinacia oleracea]) HSP 1 Score: 574.7 bits (1480), Expect = 8.900e-161 Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of Spo01582.1 vs. NCBI nr
Match: gi|731311597|ref|XP_010670234.1| (PREDICTED: probable aquaporin PIP1-5 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 553.5 bits (1425), Expect = 2.100e-154 Identity = 270/285 (94.74%), Postives = 280/285 (98.25%), Query Frame = 1
BLAST of Spo01582.1 vs. NCBI nr
Match: gi|291621325|dbj|BAI94500.1| (plasma membrane intrinsic protein [Dianthus caryophyllus]) HSP 1 Score: 534.6 bits (1376), Expect = 1.000e-148 Identity = 262/285 (91.93%), Postives = 278/285 (97.54%), Query Frame = 1
BLAST of Spo01582.1 vs. NCBI nr
Match: gi|729355009|ref|XP_010544738.1| (PREDICTED: aquaporin PIP1-1-like [Tarenaya hassleriana]) HSP 1 Score: 533.5 bits (1373), Expect = 2.300e-148 Identity = 261/286 (91.26%), Postives = 276/286 (96.50%), Query Frame = 1
BLAST of Spo01582.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKL3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_061350 PE=3 SV=1) HSP 1 Score: 575.9 bits (1483), Expect = 2.800e-161 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of Spo01582.1 vs. UniProtKB/TrEMBL
Match: Q9SM45_SPIOL (PM28B protein OS=Spinacia oleracea GN=pm28b PE=2 SV=1) HSP 1 Score: 574.7 bits (1480), Expect = 6.200e-161 Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of Spo01582.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D897_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g004520 PE=3 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 1.500e-154 Identity = 270/285 (94.74%), Postives = 280/285 (98.25%), Query Frame = 1
BLAST of Spo01582.1 vs. UniProtKB/TrEMBL
Match: D4QD78_DIACA (Plasma membrane intrinsic protein OS=Dianthus caryophyllus GN=DcPIP1 PE=2 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 7.100e-149 Identity = 262/285 (91.93%), Postives = 278/285 (97.54%), Query Frame = 1
BLAST of Spo01582.1 vs. UniProtKB/TrEMBL
Match: Q40266_MESCR (Aquaporin OS=Mesembryanthemum crystallinum GN=mipB PE=2 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 2.100e-148 Identity = 262/285 (91.93%), Postives = 275/285 (96.49%), Query Frame = 1
BLAST of Spo01582.1 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 2.300e-148 Identity = 260/286 (90.91%), Postives = 272/286 (95.10%), Query Frame = 1
BLAST of Spo01582.1 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 525.8 bits (1353), Expect = 3.000e-148 Identity = 261/287 (90.94%), Postives = 272/287 (94.77%), Query Frame = 1
BLAST of Spo01582.1 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 523.5 bits (1347), Expect = 1.500e-147 Identity = 255/287 (88.85%), Postives = 273/287 (95.12%), Query Frame = 1
BLAST of Spo01582.1 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 5.600e-147 Identity = 255/286 (89.16%), Postives = 270/286 (94.41%), Query Frame = 1
BLAST of Spo01582.1 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 5.600e-147 Identity = 255/286 (89.16%), Postives = 270/286 (94.41%), Query Frame = 1
BLAST of Spo01582.1 vs. TAIR (Arabidopsis)
Match: AT1G01620.1 (plasma membrane intrinsic protein 1C) HSP 1 Score: 526.2 bits (1354), Expect = 1.300e-149 Identity = 260/286 (90.91%), Postives = 272/286 (95.10%), Query Frame = 1
BLAST of Spo01582.1 vs. TAIR (Arabidopsis)
Match: AT4G00430.1 (plasma membrane intrinsic protein 1;4) HSP 1 Score: 525.8 bits (1353), Expect = 1.700e-149 Identity = 261/287 (90.94%), Postives = 272/287 (94.77%), Query Frame = 1
BLAST of Spo01582.1 vs. TAIR (Arabidopsis)
Match: AT4G23400.1 (plasma membrane intrinsic protein 1;5) HSP 1 Score: 523.5 bits (1347), Expect = 8.300e-149 Identity = 255/287 (88.85%), Postives = 273/287 (95.12%), Query Frame = 1
BLAST of Spo01582.1 vs. TAIR (Arabidopsis)
Match: AT3G61430.1 (plasma membrane intrinsic protein 1A) HSP 1 Score: 521.5 bits (1342), Expect = 3.200e-148 Identity = 255/286 (89.16%), Postives = 270/286 (94.41%), Query Frame = 1
BLAST of Spo01582.1 vs. TAIR (Arabidopsis)
Match: AT2G45960.3 (plasma membrane intrinsic protein 1B) HSP 1 Score: 462.6 bits (1189), Expect = 1.700e-130 Identity = 228/255 (89.41%), Postives = 242/255 (94.90%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01582.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01582.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01582.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo01582.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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