Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCATGATAAAATAATCCATCTAGTATAGAATAGACAATGCCTACATGAAAAATTCAAAATAAATAATGAAAATTGAATTGGTGATACTTATCTTTGAAAGTTAATCAAATCAAATCAAGTTTGTTATCTCATAATAATAGTCACAATTCATACAATTCCAAATTATCCCCGTAAACTTATCATCTTATCCACACAATCTTCCCACGCGCACAGACTGACACACCTTCACTTCTCCCTCTTTCTTCTTGCAATTTCCATTTCCCCCTTCACCGAAAAAGAGGATCAAAATTTTCTGACCAACCAAGCACTCCCTAAACTCATCCCCAATGTCGATATCCGGATTAACGAATACTTTCTCAAACCCTAACCCTAAAATCCTGAATTCCCCCAATATCTCAAATTTAAATGGAAACTGCAGGTTCAAACTTAGGGTTTGTGCGAAAGTTACAACTCCTGAACCAAATGCTAAAGTGTACGGTCAATTCTCTGCTCCAGTGAAGCCTAGTGGTAGTAGTAGTAGCTCAACGACGTCGTCTTCTTCCCCGAAGAAGAAGAAAGAGGATGAACAGAAACAAGATTATTATATCAATATGGGTTACGCTATTCGCTGCTTGCGTGAGGAATTTCCTGAATTGTTTTCCAGAGAGCCCAATTTCGATATTTACAGGTTTTTATTCTTAATTCCCCCCCTGAATTGGTTTGGTTAGATATGGTATATTGTACAGTATTTTGCTGGAACTTAGATCCGTAATATTTATTGTTCATTATCTGTTTTGAATTAGTTGTCTTTCTCCTGCTAATTATGATTTTATTTAAAGATGTGAAATTTGTGTGTGTAATAATACGATAGCTTATGCTGCTTCACCGATATTGGTGTAATTGTCTAATTGATTGATTGGCTGAGCCCATGAGATACTATGATCAATTTTGATGGGAATCCTTGATTTGGTACCATGTTAATGCCTTAGAAAACATCAGACACGGCGAAACCTGTCAAATCTTGTTTAGTGTTTTGATAAGTGAAGGGGAAGGGAGAGCCGGAGAGGAAGAAGAGAAAGAAAAGAACTATATTTTGCCGTGTTTGGCTAAACGAAAGGAATCGAAACATTAAGGGATCGATAAGAATATAACCGATAAATTATGCAACTTACTAAATTTCTTGGCTTGATCTAAAAATACATTTATACACATGAAGCTGTGAGTTCATTGTAGATTTGTAGCTAGTTTTAGATGGTGCAATATCTAGAAATATGATGCAACATCAGCTTTATAAATTCTCAAAATTCCACTCGCTTCGATCGATTTTAGATTGTCTCGATTAATATAACCATTCATATTAAGCAATGCTAAAACTGAGCAACAGTATGCATTAATTGCACAAATTAACATAGAGTAATAAGGTAAGGAAAATCCAAGTGAGACATTGTGTTTTCCTTGATCTCAATTTCTGGTGTGAATGATTGTCTATGCAGTAATTAGCCGAGCAAACAGCTGAGAGAAAGAGAGAAGTTTGAATTACTTTAGTTATTCGGAAAATTGTCAAAAAGTACCTTCTTTTTCACTCATTTTGTGAACCTTGTTCAATTTTGTAAAATAGCACCTTAAATTTAAAAAGTTATATCAAAAATGGAACCTTAGGACAGTTATCCGGCCAATTTGTCAACTCTCCGGCCATTGTCTCCGTTTGTTGGCACAATTTGAGTAGGAAATATACACGTGTGAACACGCTCTCAATAATCATACATTCTGATCTTGAAGATTTCCCACCAAAAATACCAGAATATTTTCCACCAAAAAACTTTGAGTTGGATCTAAGATTTTAGGTTTTGTTCTTATAAAAGTGTTAGAGAGACGCGTGTTTTTTTTTGTTTTACACGCACAATGTTTTGGAGGAAAGCATGAGTCAATGGCCGGAAAGTTGACAAACTGGCTGGATAGTTGCCCTAAGGTGCCATTTTTAATAAAACTTTACTTTAAGGTGTTATTTGACAAAATTGAACACATAAGGTACTAGTTCACAAAGTGTTTGAAAAAAGGTACTTTTTGACAATTTTACCTAGTTATTCAAGAAAATAAGAATTAGATTTTGTTGTGTGTACAAATGTGAAGTTGCAAACATCTCGCGTGTTTTCAAATTATCTTCATTATTGGATGTCAATTAGATTAGAAAGAAAAGGGATGAAGTTTAAGTCTTTCAACCCAGTGCCGTTTTCTATCATGTGACACCATTGATCAAATTATAACTAATTTATTCTTATTGGGATTCTGTTTTAGGGATGATATTGTGTTCAAAGATCCCTTAAATACCTTTGCTGGCATTGAGAACTACAAATCGTTATTCTGGGCATTGCGATTCCATGGAAGGATATTTTTCAAAGCTTTATGGGTTGAAATTCTAAGTGTGTGGCAACCTTCAGAGAATGTCATCTTGGTTCGTTGGACTGTCCATGGAATCCCACGAGTCCCATGGGAGAGCCGTGGTCGTTTTGACGGCCTTTCAGAGTACAAACTTGATAGAAATGGGAAGATTTATCAGCATAAAGTCGACAACATTGCTCTCAATTCTCCTCGCAAGTTCCAGGTACTCTCTGTCCAGGAGTTAATCTTGTCACTCGGTTACCCTACAACTCCAAAGCCTACCTGCTTTGAGCTCACTTCTTCCACAAAACTCCACCCATTTGCCGGAGAAACGGAATTTTTAAGTCATTACTTGAATTATGTCCTGGATTTTTCACATATACACGAGGCAGAAACTTGTCAGAAATAATGATAGCCTTATGGTGATAAGTTTTGCTAGTTTTTGAATGCCTAGAGCTTGGTCATCCTTAGCGTTGGAGAGCTATATAGTTTCCTTTATGCTTCTCGAACGATAAAGTAATACACCTGTATGTTATTATACTAATAGTCATTTCAGAATGCTGGAGCTTGATTAAGTGTAGTATGAACAAAACCTCACCACCTGCTCATATGTAATTAAGCATGATATAATAGTCTTGTGAACATTGTAGATTTTGTATATATCTAAACATAAAGTTGAGATATCAGTTTCTTCTTGCTGCATTTTGTTTCCAGTTTATTCCAATTTCATTCATGCCTTTAAAATACAACCACAGTAAAGATGGCCGTGGACCGGGGCCGGGTTGGGCTGATCCCACGACAGGCCCATATTGTTTTGGCCCGACCTGAAAAGTTCAAAGCCCACAGACTTTTGTG ATTTCATGATAAAATAATCCATCTAGTATAGAATAGACAATGCCTACATGAAAAATTCAAAATAAATAATGAAAATTGAATTGGTGATACTTATCTTTGAAAGTTAATCAAATCAAATCAAGTTTGTTATCTCATAATAATAGTCACAATTCATACAATTCCAAATTATCCCCGTAAACTTATCATCTTATCCACACAATCTTCCCACGCGCACAGACTGACACACCTTCACTTCTCCCTCTTTCTTCTTGCAATTTCCATTTCCCCCTTCACCGAAAAAGAGGATCAAAATTTTCTGACCAACCAAGCACTCCCTAAACTCATCCCCAATGTCGATATCCGGATTAACGAATACTTTCTCAAACCCTAACCCTAAAATCCTGAATTCCCCCAATATCTCAAATTTAAATGGAAACTGCAGGTTCAAACTTAGGGTTTGTGCGAAAGTTACAACTCCTGAACCAAATGCTAAAGTGTACGGTCAATTCTCTGCTCCAGTGAAGCCTAGTGGTAGTAGTAGTAGCTCAACGACGTCGTCTTCTTCCCCGAAGAAGAAGAAAGAGGATGAACAGAAACAAGATTATTATATCAATATGGGTTACGCTATTCGCTGCTTGCGTGAGGAATTTCCTGAATTGTTTTCCAGAGAGCCCAATTTCGATATTTACAGGGATGATATTGTGTTCAAAGATCCCTTAAATACCTTTGCTGGCATTGAGAACTACAAATCGTTATTCTGGGCATTGCGATTCCATGGAAGGATATTTTTCAAAGCTTTATGGGTTGAAATTCTAAGTGTGTGGCAACCTTCAGAGAATGTCATCTTGGTTCGTTGGACTGTCCATGGAATCCCACGAGTCCCATGGGAGAGCCGTGGTCGTTTTGACGGCCTTTCAGAGTACAAACTTGATAGAAATGGGAAGATTTATCAGCATAAAGTCGACAACATTGCTCTCAATTCTCCTCGCAAGTTCCAGGTACTCTCTGTCCAGGAGTTAATCTTGTCACTCGGTTACCCTACAACTCCAAAGCCTACCTGCTTTGAGCTCACTTCTTCCACAAAACTCCACCCATTTGCCGGAGAAACGGAATTTTTAAGTCATTACTTGAATTATGTCCTGGATTTTTCACATATACACGAGGCAGAAACTTGTCAGAAATAATGATAGCCTTATGGTGATAAGTTTTGCTAGTTTTTGAATGCCTAGAGCTTGGTCATCCTTAGCGTTGGAGAGCTATATAGTTTCCTTTATGCTTCTCGAACGATAAAGTAATACACCTGTATGTTATTATACTAATAGTCATTTCAGAATGCTGGAGCTTGATTAAGTGTAGTATGAACAAAACCTCACCACCTGCTCATATGTAATTAAGCATGATATAATAGTCTTGTGAACATTGTAGATTTTGTATATATCTAAACATAAAGTTGAGATATCAGTTTCTTCTTGCTGCATTTTGTTTCCAGTTTATTCCAATTTCATTCATGCCTTTAAAATACAACCACAGTAAAGATGGCCGTGGACCGGGGCCGGGTTGGGCTGATCCCACGACAGGCCCATATTGTTTTGGCCCGACCTGAAAAGTTCAAAGCCCACAGACTTTTGTG ATGTCGATATCCGGATTAACGAATACTTTCTCAAACCCTAACCCTAAAATCCTGAATTCCCCCAATATCTCAAATTTAAATGGAAACTGCAGGTTCAAACTTAGGGTTTGTGCGAAAGTTACAACTCCTGAACCAAATGCTAAAGTGTACGGTCAATTCTCTGCTCCAGTGAAGCCTAGTGGTAGTAGTAGTAGCTCAACGACGTCGTCTTCTTCCCCGAAGAAGAAGAAAGAGGATGAACAGAAACAAGATTATTATATCAATATGGGTTACGCTATTCGCTGCTTGCGTGAGGAATTTCCTGAATTGTTTTCCAGAGAGCCCAATTTCGATATTTACAGGGATGATATTGTGTTCAAAGATCCCTTAAATACCTTTGCTGGCATTGAGAACTACAAATCGTTATTCTGGGCATTGCGATTCCATGGAAGGATATTTTTCAAAGCTTTATGGGTTGAAATTCTAAGTGTGTGGCAACCTTCAGAGAATGTCATCTTGGTTCGTTGGACTGTCCATGGAATCCCACGAGTCCCATGGGAGAGCCGTGGTCGTTTTGACGGCCTTTCAGAGTACAAACTTGATAGAAATGGGAAGATTTATCAGCATAAAGTCGACAACATTGCTCTCAATTCTCCTCGCAAGTTCCAGGTACTCTCTGTCCAGGAGTTAATCTTGTCACTCGGTTACCCTACAACTCCAAAGCCTACCTGCTTTGAGCTCACTTCTTCCACAAAACTCCACCCATTTGCCGGAGAAACGGAATTTTTAAGTCATTACTTGAATTATGTCCTGGATTTTTCACATATACACGAGGCAGAAACTTGTCAGAAATAA MSISGLTNTFSNPNPKILNSPNISNLNGNCRFKLRVCAKVTTPEPNAKVYGQFSAPVKPSGSSSSSTTSSSSPKKKKEDEQKQDYYINMGYAIRCLREEFPELFSREPNFDIYRDDIVFKDPLNTFAGIENYKSLFWALRFHGRIFFKALWVEILSVWQPSENVILVRWTVHGIPRVPWESRGRFDGLSEYKLDRNGKIYQHKVDNIALNSPRKFQVLSVQELILSLGYPTTPKPTCFELTSSTKLHPFAGETEFLSHYLNYVLDFSHIHEAETCQK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo01603.1 vs. NCBI nr
Match: gi|902193951|gb|KNA12422.1| (hypothetical protein SOVF_126130 [Spinacia oleracea]) HSP 1 Score: 568.5 bits (1464), Expect = 6.200e-159 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1
BLAST of Spo01603.1 vs. NCBI nr
Match: gi|731311463|ref|XP_010669672.1| (PREDICTED: uncharacterized protein LOC104886839 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 458.4 bits (1178), Expect = 9.000e-126 Identity = 228/281 (81.14%), Postives = 249/281 (88.61%), Query Frame = 1
BLAST of Spo01603.1 vs. NCBI nr
Match: gi|567904874|ref|XP_006444925.1| (hypothetical protein CICLE_v10021974mg [Citrus clementina]) HSP 1 Score: 311.6 bits (797), Expect = 1.400e-81 Identity = 153/243 (62.96%), Postives = 188/243 (77.37%), Query Frame = 1
BLAST of Spo01603.1 vs. NCBI nr
Match: gi|590721643|ref|XP_007051673.1| (Uncharacterized protein TCM_005233 [Theobroma cacao]) HSP 1 Score: 308.9 bits (790), Expect = 8.900e-81 Identity = 156/245 (63.67%), Postives = 189/245 (77.14%), Query Frame = 1
BLAST of Spo01603.1 vs. NCBI nr
Match: gi|645254258|ref|XP_008232957.1| (PREDICTED: uncharacterized protein LOC103332045 [Prunus mume]) HSP 1 Score: 307.4 bits (786), Expect = 2.600e-80 Identity = 148/249 (59.44%), Postives = 188/249 (75.50%), Query Frame = 1
BLAST of Spo01603.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYS7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_126130 PE=4 SV=1) HSP 1 Score: 568.5 bits (1464), Expect = 4.300e-159 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1
BLAST of Spo01603.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D7N6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g003830 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 6.300e-126 Identity = 228/281 (81.14%), Postives = 249/281 (88.61%), Query Frame = 1
BLAST of Spo01603.1 vs. UniProtKB/TrEMBL
Match: A0A067H3B7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026404mg PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 9.500e-82 Identity = 153/243 (62.96%), Postives = 188/243 (77.37%), Query Frame = 1
BLAST of Spo01603.1 vs. UniProtKB/TrEMBL
Match: V4U2C3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021974mg PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 9.500e-82 Identity = 153/243 (62.96%), Postives = 188/243 (77.37%), Query Frame = 1
BLAST of Spo01603.1 vs. UniProtKB/TrEMBL
Match: A0A061DSY1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005233 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 6.200e-81 Identity = 156/245 (63.67%), Postives = 189/245 (77.14%), Query Frame = 1
BLAST of Spo01603.1 vs. TAIR (Arabidopsis)
Match: AT2G46220.1 (Uncharacterized conserved protein (DUF2358)) HSP 1 Score: 275.8 bits (704), Expect = 2.900e-74 Identity = 128/195 (65.64%), Postives = 161/195 (82.56%), Query Frame = 1
BLAST of Spo01603.1 vs. TAIR (Arabidopsis)
Match: AT1G16320.1 (Uncharacterized conserved protein (DUF2358)) HSP 1 Score: 203.8 bits (517), Expect = 1.400e-52 Identity = 95/195 (48.72%), Postives = 132/195 (67.69%), Query Frame = 1
BLAST of Spo01603.1 vs. TAIR (Arabidopsis)
Match: AT1G79510.1 (Uncharacterized conserved protein (DUF2358)) HSP 1 Score: 203.0 bits (515), Expect = 2.400e-52 Identity = 96/185 (51.89%), Postives = 131/185 (70.81%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01603.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01603.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01603.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo01603.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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