Spo01628 (gene)

Overview
NameSpo01628
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 51127592 .. 51128331 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTACGGAGAGGTGGACGGTGGTGAATGGCTAAAAAAATAGGATGTCATAAAAAAAATCTCCGCATTATAAATTCACAACTTCTCAATCACCAGTTTTCGATCACTCTTCATCCTCTTCTGTCTCTCTCTCTCTCCAACCTTTACATTCAACTATTCAATAGAGATAGAGATATTGAAACAGACACTGGCTTTTTAATTATCATTACCTTTAGAAAACACCCCCAAAATTTATTAATAATTTTCTCCAACTGGGTTTTCTTGTCTCTTTGTGCTCTCAAATACTCACTACTTATCCCCTCATTTCTCGCTCTCCTTCTTCTTCCCCTGTTTATCCCTTCATTTTCCAGCTCAGGTAATTCTTTTTCTTTTTCTGTATCATTACTTATCCACAGTACTTAATTACTACTAATTACAACTTCAGTTGACTAATTAAATTTTTTAGATTCATTTATTTTAATTATATTTTTTGTATGATTTGTATTGTTTCTGGTATTTGCCTTACTCAACAGGAGTACATGATGTCGTATGTCCAAACTCTGAGGAAGATTCTGATTCTGATTATTCATTTTTTTTACTTTCCTTATTTTCTCAAAAATAAATTCTCCTGAGAATATACTATTTGTGAGGGGATTTATTTTTCACTTTTTCTGGATTTGATCTTTTTCCGGCTTTTGTTTTAGGCGATATCCATTTGGATCTTTTGGGTACTGTAATTAATACCCAAAAGTTAATTCCTTGA

mRNA sequence

GTTACGGAGAGGTGGACGGTGGTGAATGGCTAAAAAAATAGGATGTCATAAAAAAAATCTCCGCATTATAAATTCACAACTTCTCAATCACCAGTTTTCGATCACTCTTCATCCTCTTCTGTCTCTCTCTCTCTCCAACCTTTACATTCAACTATTCAATAGAGATAGAGATATTGAAACAGACACTGGCTTTTTAATTATCATTACCTTTAGAAAACACCCCCAAAATTTATTAATAATTTTCTCCAACTGGGTTTTCTTGTCTCTTTGTGCTCTCAAATACTCACTACTTATCCCCTCATTTCTCGCTCTCCTTCTTCTTCCCCTGTTTATCCCTTCATTTTCCAGCTCAGGCGATATCCATTTGGATCTTTTGGGTACTGTAATTAATACCCAAAAGTTAATTCCTTGA

Coding sequence (CDS)

ATGGCTAAAAAAATAGGATGTCATAAAAAAAATCTCCGCATTATAAATTCACAACTTCTCAATCACCAGTTTTCGATCACTCTTCATCCTCTTCTGTCTCTCTCTCTCTCCAACCTTTACATTCAACTATTCAATAGAGATAGAGATATTGAAACAGACACTGGCTTTTTAATTATCATTACCTTTAGAAAACACCCCCAAAATTTATTAATAATTTTCTCCAACTGGGTTTTCTTGTCTCTTTGTGCTCTCAAATACTCACTACTTATCCCCTCATTTCTCGCTCTCCTTCTTCTTCCCCTGTTTATCCCTTCATTTTCCAGCTCAGGCGATATCCATTTGGATCTTTTGGGTACTGTAATTAATACCCAAAAGTTAATTCCTTGA

Protein sequence

MAKKIGCHKKNLRIINSQLLNHQFSITLHPLLSLSLSNLYIQLFNRDRDIETDTGFLIIITFRKHPQNLLIIFSNWVFLSLCALKYSLLIPSFLALLLLPLFIPSFSSSGDIHLDLLGTVINTQKLIP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01628.1Spo01628.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo01628.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01628.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01628.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01628.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071554 cell wall organization or biogenesis
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0009414 response to water deprivation
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009658 chloroplast organization
biological_process GO:0006457 protein folding
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0005515 protein binding
molecular_function GO:0043621 protein self-association
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo084070.81Barchart | Table
Spo005260.77Barchart | Table
Spo233320.77Barchart | Table
Spo177260.76Barchart | Table
Spo259870.75Barchart | Table
Spo237450.75Barchart | Table
Spo026650.75Barchart | Table
Spo123320.74Barchart | Table
Spo147230.74Barchart | Table
Spo266100.74Barchart | Table
Spo233820.74Barchart | Table
Spo112850.74Barchart | Table
Spo153170.74Barchart | Table
Spo152220.74Barchart | Table
Spo108350.73Barchart | Table
Spo006770.73Barchart | Table
Spo220040.73Barchart | Table
Spo126090.73Barchart | Table
Spo158430.73Barchart | Table
Spo019250.73Barchart | Table
Spo021060.72Barchart | Table
Spo192170.72Barchart | Table
Spo059150.72Barchart | Table
Spo259850.72Barchart | Table
Spo251070.72Barchart | Table
Spo031990.72Barchart | Table
Spo157020.71Barchart | Table
Spo033620.71Barchart | Table
Spo012520.71Barchart | Table
Spo053070.71Barchart | Table
Spo238530.71Barchart | Table
Spo209300.71Barchart | Table
Spo087130.70Barchart | Table
Spo041230.70Barchart | Table
Spo247360.70Barchart | Table
Spo002560.70Barchart | Table
Spo226940.70Barchart | Table
Spo083510.70Barchart | Table
Spo273640.70Barchart | Table
Spo085520.70Barchart | Table
Spo029180.70Barchart | Table
Spo139810.70Barchart | Table
Spo095540.70Barchart | Table
Spo169960.70Barchart | Table
Spo002050.69Barchart | Table
Spo011550.69Barchart | Table
Spo094270.69Barchart | Table
Spo129540.69Barchart | Table
Spo149140.69Barchart | Table
Spo155240.69Barchart | Table
Spo161880.69Barchart | Table
Spo162400.69Barchart | Table
Spo168010.69Barchart | Table
Spo211550.69Barchart | Table
Spo231240.69Barchart | Table
Spo233270.69Barchart | Table
Spo266880.69Barchart | Table
Spo282670.69Barchart | Table
Spo180630.68Barchart | Table
Spo143540.68Barchart | Table
Spo131610.68Barchart | Table
Spo215910.68Barchart | Table
Spo081140.68Barchart | Table
Spo199380.68Barchart | Table
Spo243310.68Barchart | Table
Spo201060.68Barchart | Table
Spo152150.68Barchart | Table
Spo116880.68Barchart | Table
Spo259880.68Barchart | Table
Spo010570.68Barchart | Table
Spo100300.67Barchart | Table
Spo116680.67Barchart | Table
Spo159950.67Barchart | Table
Spo209120.67Barchart | Table
Spo094700.67Barchart | Table
Spo069530.67Barchart | Table
Spo134990.67Barchart | Table
Spo026960.67Barchart | Table
Spo126820.67Barchart | Table
Spo230760.67Barchart | Table
Spo146300.67Barchart | Table
Spo078920.67Barchart | Table
Spo078290.67Barchart | Table
Spo140160.67Barchart | Table
Spo056530.67Barchart | Table
Spo152660.67Barchart | Table
Spo188440.67Barchart | Table
Spo149110.66Barchart | Table
Spo149380.66Barchart | Table
Spo259810.66Barchart | Table
Spo115580.66Barchart | Table
Spo115240.66Barchart | Table
Spo158900.66Barchart | Table
Spo161860.66Barchart | Table
Spo011350.66Barchart | Table
Spo109650.66Barchart | Table
Spo194310.66Barchart | Table
Spo200500.66Barchart | Table
Spo202640.66Barchart | Table
Spo228110.66Barchart | Table
Spo231250.66Barchart | Table
Spo232780.66Barchart | Table
Spo269750.66Barchart | Table
Spo244300.66Barchart | Table
Spo042000.66Barchart | Table
Spo250080.66Barchart | Table
Spo251960.66Barchart | Table
Spo131710.66Barchart | Table
Spo139050.66Barchart | Table
Spo142730.66Barchart | Table
Spo255730.66Barchart | Table
Spo011870.65Barchart | Table
Spo252370.65Barchart | Table
Spo181700.65Barchart | Table
Spo090080.65Barchart | Table
Spo241330.65Barchart | Table
Spo243240.65Barchart | Table
Spo010540.65Barchart | Table
Spo112760.65Barchart | Table
Spo246750.65Barchart | Table
Spo216360.65Barchart | Table
Spo212150.65Barchart | Table
Spo227940.65Barchart | Table