Spo01700 (gene) | SpinachBase

Overview


Name	Spo01700
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Chlorophyll a-b binding protein 8, chloroplastic (LHCII type I CAB-8) (Precursor)
Location	chr2 : 50516738 .. 50519615 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGGTGGCGGCATCGACAGCGGCGGCGTGTCTAGGAAAGTCAGAATTGTTGGGGAATTCACTCAACTTAAGAAGTGCAACTTCCGCCCCATGTAGCACACCAAGTGTTGGTCCATGTAAGATTGTTGCTCTTTTTAATTTTGGTAAGAAGGCGGCTACTCCTCCTGCTAAGTCTAAGGCTAAGGTTGCTGTCGCTTCGCCTGCTGATGACGAGCTCGCTAAGTGGTATGGTCCTGACCGTAGGATCTTCTTGCCTGATGGTCTTTTGGACCGTGATGATATCCCTGAGTACCTCAACGGAGAAGTTCCCGGAGAGTAAGACTCTTTTTTTTTCCATGCATATGATTTATATCTTACTGATAGAGTATAAAACTAATCTTGGGGTTTCAACTATCAGCTTAAGCTTTTGGTTGAGTTGGTCCTTTGACATGGTATCAGAGCCAACGTGACGCAAAGGTCACGGGTTCGAATCTCATCCACCCCTTCTTTAAAAGTGGAATATTTCGCGCTAGGTATGAGGAGGCCTATGCTGCATCCACACTTCAAGCCCAAAGGGCTTTCATGTGAGGGGGCGTTTTAGAGTATAAAACTAATCTTGGGGTTTCAACTATCAGCTTAAGCTTTTGGTTGAGTTGGTCCCTTGACACTTACCATGTCTATATATAAGTATATAACCTTTGGGTTTTGGGATTTTTGCATGTTTTACTTTAAGGTTAATGATTTATTAGAATTATGCATTGACAATCCTTGTAAGGAGTACTGAAATAGCAACTAAAAGTAACAAAAAGTTCAATGTATATGTGTGACTATGCATTGTGGACCTCGTGGTAGACTTTGATAATGTTAGAAGGTTCGGTATCATGATTTTTAACAATATAGTTACTAGTTAGCCTTGTGTTTTGAGTAGAATTATTAGACTTCTTAACTTCTATTCAAACATCTAAACGGTTATTTTACACTAGCATAAAGTATCATTCGTGAAATTATCATTGTCTTTGTATAGATCAAAATCTACGATCGAACTAATATTACTACGGAGTAATACACTTAAAACTAACCATTATTGCGTGGTATGTTGTTTGATTTGTCCAAATGTGTATTTCAAATTATTAAATTTTCAATTATAATGAAGGACATTAATAATAGTAAAAGATTTGTCTTAGAAACCGTGAGAAATAAAATGTTGCATTGCTTGACATACATACGGTTGATTTGTTGCAGCTATGGTTACGACCCTTTTGGTCTTGGCAAGAAGCCCGAGGACTTTGCCAAGTAAGAACACTTTTCAACTGAATTATCTTATAAGTTCATAATACCTAAATGTGTAATAATGATAAAGATATTAATGAAAAATGTACATATTCAGATACCAAGCATTTGAGTTGATCCACGCCAGATGGGCAATGCTTGGAGCAGCTGGGTGTGTTATCCCAGAAGCCTTCAACAAATTTGGTGCTAACTGTGGTCCTGAAGCTGTTTGGTTCAAGGTCTTATTTTCAATTAATTAATCTAAGTACCCAGATTAATGTTTCTAATTAATTAGTCCATATGTTTAATTATTGGTGTTAATTTTGTTATTGTACAGACTGGTGCCTTGTTGCTAGATGGAAACACCTTAAACTACTTTGGAAAGAACATTCCAATCAACCTTGTTCTTGCTGTTGTTGCTGAGGTTGTTCTTCTTGGTGGTGCTGAGTACTACAGAATCACTAATGGCTTGGTATGTATACACATTTCTAGTACTGCGAGCAAACTATATTCTCTCCTTTTGTTTTCAGTTGTCGCATTACCAGTTCAGATTAAACTATCTAACATGTTTTTTTTACTTCTAAATGCAAGAAGTAATAATGGGTAAAACAGGAGGAGATTGTTGTTAGGGCTATACTAACAAATTTAGAAATTTCCAAACTTTTACTCCGTAAAAAAAAATACTGTCTATTTTGGTTTTTGGCTTTTTGGTTTTAAAAGGCTATGTGATTTAGATTGAATTATTAACTTAAAAAATAGTCATACTTATAGTTTTCATAATCACACAACAAAAAATGGAAACTAGGGCCCGCTCGGTATCACTGTAAGTTTTCAGTTTTTGGTTTTTTGGTTTTATAAGTCATAAGATTTGGATTGAATTATGAACCACAAAATAGTCATTACTACATATTGTTATCATGTTAATAATGAAAACTGACAATAAAAAACTGGAAACTACTTTTTATGGTTTTCATATTTTGGTTTTTAATTTTGTAAAAAGCAAGAAACTGGAAACAAAAAAAGATACCGAACGAGCCCGTTTGTTGTTTGCATATTTTGGTTTTTAATTTTGTAAAAAACTGGAAAATAGAAACAAAAAACGATACCAAACAATGTCGTCTCATTGTATAAAATCTATCTTGTTTTTCCTCCTTTTTAAAACTCAAAAAGAGTAGAGTTGATCAAATAATAAATTAAAAAAAAAAAAGAAAAAAAAAGAGTAACACATGGGATAAATTTCTAGCTCTTTGTATAACCAAGTACAAGATGAAACCTGTGGAGGTTCTCAATTATCTAATTGTATGAAGTTTCATTATCAAAACTAAGAATATTTTTTGAGAAATACTACACAAAATGGTTGACAGGACTTTGAGGACAAGCTTCACCCAGGAGGCCCATTTGACCCATTGGGCTTAGCAAAAGACCCAGACCAAGCAGCCTTGTTGAAGGTGAAGGAGATCAAGAATGGTAGGCTTGCAATGTTCTCAATGTTTGCATTCTTTATCCAAGCTTACGTGACGGGCCAAGGCCCAGTTGAGAATCTGTCTGCTCATCTTAGCGACCCATTCGGTAACAACTTGCTCACTGTCATTGGTGGAGCTGCTGAAAGAGTTCCCACCCTGTAA

mRNA sequence

ATGGCTTCGGTGGCGGCATCGACAGCGGCGGCGTGTCTAGGAAAGTCAGAATTGTTGGGGAATTCACTCAACTTAAGAAGTGCAACTTCCGCCCCATGTAGCACACCAAGTGTTGGTCCATGTAAGATTGTTGCTCTTTTTAATTTTGGTAAGAAGGCGGCTACTCCTCCTGCTAAGTCTAAGGCTAAGGTTGCTGTCGCTTCGCCTGCTGATGACGAGCTCGCTAAGTGGTATGGTCCTGACCGTAGGATCTTCTTGCCTGATGGTCTTTTGGACCGTGATGATATCCCTGAGTACCTCAACGGAGAAGTTCCCGGAGACTATGGTTACGACCCTTTTGGTCTTGGCAAGAAGCCCGAGGACTTTGCCAAATACCAAGCATTTGAGTTGATCCACGCCAGATGGGCAATGCTTGGAGCAGCTGGGTGTGTTATCCCAGAAGCCTTCAACAAATTTGGTGCTAACTGTGGTCCTGAAGCTGTTTGGTTCAAGACTGGTGCCTTGTTGCTAGATGGAAACACCTTAAACTACTTTGGAAAGAACATTCCAATCAACCTTGTTCTTGCTGTTGTTGCTGAGGTTGTTCTTCTTGGTGGTGCTGAGTACTACAGAATCACTAATGGCTTGGACTTTGAGGACAAGCTTCACCCAGGAGGCCCATTTGACCCATTGGGCTTAGCAAAAGACCCAGACCAAGCAGCCTTGTTGAAGGTGAAGGAGATCAAGAATGGTAGGCTTGCAATGTTCTCAATGTTTGCATTCTTTATCCAAGCTTACGTGACGGGCCAAGGCCCAGTTGAGAATCTGTCTGCTCATCTTAGCGACCCATTCGGTAACAACTTGCTCACTGTCATTGGTGGAGCTGCTGAAAGAGTTCCCACCCTGTAA

Coding sequence (CDS)

ATGGCTTCGGTGGCGGCATCGACAGCGGCGGCGTGTCTAGGAAAGTCAGAATTGTTGGGGAATTCACTCAACTTAAGAAGTGCAACTTCCGCCCCATGTAGCACACCAAGTGTTGGTCCATGTAAGATTGTTGCTCTTTTTAATTTTGGTAAGAAGGCGGCTACTCCTCCTGCTAAGTCTAAGGCTAAGGTTGCTGTCGCTTCGCCTGCTGATGACGAGCTCGCTAAGTGGTATGGTCCTGACCGTAGGATCTTCTTGCCTGATGGTCTTTTGGACCGTGATGATATCCCTGAGTACCTCAACGGAGAAGTTCCCGGAGACTATGGTTACGACCCTTTTGGTCTTGGCAAGAAGCCCGAGGACTTTGCCAAATACCAAGCATTTGAGTTGATCCACGCCAGATGGGCAATGCTTGGAGCAGCTGGGTGTGTTATCCCAGAAGCCTTCAACAAATTTGGTGCTAACTGTGGTCCTGAAGCTGTTTGGTTCAAGACTGGTGCCTTGTTGCTAGATGGAAACACCTTAAACTACTTTGGAAAGAACATTCCAATCAACCTTGTTCTTGCTGTTGTTGCTGAGGTTGTTCTTCTTGGTGGTGCTGAGTACTACAGAATCACTAATGGCTTGGACTTTGAGGACAAGCTTCACCCAGGAGGCCCATTTGACCCATTGGGCTTAGCAAAAGACCCAGACCAAGCAGCCTTGTTGAAGGTGAAGGAGATCAAGAATGGTAGGCTTGCAATGTTCTCAATGTTTGCATTCTTTATCCAAGCTTACGTGACGGGCCAAGGCCCAGTTGAGAATCTGTCTGCTCATCTTAGCGACCCATTCGGTAACAACTTGCTCACTGTCATTGGTGGAGCTGCTGAAAGAGTTCCCACCCTGTAA

Protein sequence

MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKSKAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo01700.1	Spo01700.1	mRNA

Homology

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BLAST of Spo01700.1 vs. NCBI nr
Match: gi|902183996|gb|KNA10221.1| (hypothetical protein SOVF_146400 [Spinacia oleracea])

HSP 1 Score: 600.9 bits (1548), Expect = 1.200e-168
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKS 60
           MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKS
Sbjct: 1   MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKS 60

Query: 61  KAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPE 120
           KAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPE
Sbjct: 61  KAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPE 120

Query: 121 DFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 180
           DFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK
Sbjct: 121 DFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 180

Query: 181 NIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKE 240
           NIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKE
Sbjct: 181 NIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKE 240

Query: 241 IKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           IKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL
Sbjct: 241 IKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 295

[Close]

BLAST of Spo01700.1 vs. NCBI nr
Match: gi|731311511|ref|XP_010669870.1| (PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 522.3 bits (1344), Expect = 5.400e-145
Identity = 261/296 (88.18%), Postives = 272/296 (91.89%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRSATSA-PCSTPSVGPCKIVALFNFGKKAATPPAK 60
           MASVAASTAAACLGKSE+LGN LNLR+ATS+ P ST SVGPCKIVALF  GKK A  PAK
Sbjct: 1   MASVAASTAAACLGKSEMLGNPLNLRNATSSTPSSTSSVGPCKIVALF--GKKKAAAPAK 60

Query: 61  SKAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKP 120
             AK A  S  DDELAKWYGPDRRIFLPDGLLDR +IPEYLNGEVPGDYGYDPFGLGKKP
Sbjct: 61  --AKPAAVSATDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLGKKP 120

Query: 121 EDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 180
           EDFAKYQA+ELIHARWAMLGAAG +IPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG
Sbjct: 121 EDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 180

Query: 181 KNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVK 240
           KNIPINL+ AVVAEVVLLGGAEY+RITNGLD EDKLHPGGPFDPLGLA DPD+AALLKVK
Sbjct: 181 KNIPINLIAAVVAEVVLLGGAEYFRITNGLDLEDKLHPGGPFDPLGLANDPDKAALLKVK 240

Query: 241 EIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           EIKNGRLAMFSM  FFIQAYVTGQGPVENLSAHLSDPFGNNLLTVI G+AER+PTL
Sbjct: 241 EIKNGRLAMFSMLGFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVISGSAERIPTL 292

[Close]

BLAST of Spo01700.1 vs. NCBI nr
Match: gi|1021040808|gb|KZM98589.1| (hypothetical protein DCAR_014049 [Daucus carota subsp. sativus])

HSP 1 Score: 494.2 bits (1271), Expect = 1.600e-136
Identity = 247/295 (83.73%), Postives = 264/295 (89.49%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKS 60
           MAS+AASTAAA +G SE+LGN+LN  S T+   S+P+    K VALF  GKKAA PP K+
Sbjct: 174 MASLAASTAAASIGVSEMLGNTLNFSSRTAPSASSPAT--FKTVALF--GKKAAPPPKKA 233

Query: 61  KAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPE 120
                VA+P  DELAKWYGP+RRIFLP+GLLDR +IPEYLNGEVPGDYGYDPFGLGKKPE
Sbjct: 234 ----VVAAPESDELAKWYGPERRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLGKKPE 293

Query: 121 DFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 180
           DFAKYQA+ELIHARWAMLGAAG +IPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGK
Sbjct: 294 DFAKYQAYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGK 353

Query: 181 NIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKE 240
           NIPINLVLAVVAEVVLLGGAEYYRITNGLD EDKLHPGGPFDPLGLA DPDQAALLKVKE
Sbjct: 354 NIPINLVLAVVAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLADDPDQAALLKVKE 413

Query: 241 IKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           IKNGRLAMF+M  FFIQAYVTG+GPVENLSAHLSDPFGNNLLTVIGGAAER PTL
Sbjct: 414 IKNGRLAMFAMLGFFIQAYVTGEGPVENLSAHLSDPFGNNLLTVIGGAAERAPTL 460

[Close]

BLAST of Spo01700.1 vs. NCBI nr
Match: gi|645264703|ref|XP_008237804.1| (PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Prunus mume])

HSP 1 Score: 485.0 bits (1247), Expect = 9.600e-134
Identity = 246/297 (82.83%), Postives = 264/297 (88.89%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRS--ATSAPCSTPSVGPCKIVALFNFGKKAATPPA 60
           MAS+AASTAAA LG SELLGNSLN  S  A SAP +T +    K VALF+  KK A PP 
Sbjct: 1   MASLAASTAAASLGVSELLGNSLNNFSGAARSAPSAT-TPATFKTVALFS--KKKAAPPP 60

Query: 61  KSKAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKK 120
           K+KA     +PAD+ELAKWYGPDRRIFLP+GLLDR +IPEYL GEVPGDYGYDPFGLGKK
Sbjct: 61  KAKA----VAPADEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLGKK 120

Query: 121 PEDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYF 180
           PE+F+KYQA+ELIHARWAMLGAAG +IPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYF
Sbjct: 121 PENFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYF 180

Query: 181 GKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKV 240
           GKNIPINLVLAVVAEVVLLGGAEYYR+TNGLD EDKLHPGGPFDPLGLAKDPDQAALLKV
Sbjct: 181 GKNIPINLVLAVVAEVVLLGGAEYYRLTNGLDLEDKLHPGGPFDPLGLAKDPDQAALLKV 240

Query: 241 KEIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           KEIKNGRLAMFSM  FF+QAYVTG+GPVENL+ HLSDPFGNNLLTVIGG+ ER PTL
Sbjct: 241 KEIKNGRLAMFSMLGFFLQAYVTGEGPVENLAKHLSDPFGNNLLTVIGGSVERAPTL 290

[Close]

BLAST of Spo01700.1 vs. NCBI nr
Match: gi|1009143917|ref|XP_015889517.1| (PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 485.0 bits (1247), Expect = 9.600e-134
Identity = 244/296 (82.43%), Postives = 259/296 (87.50%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRS-ATSAPCSTPSVGPCKIVALFNFGKKAATPPAK 60
           MAS+AASTAAA LG SE+LGN LN    A SA  +  S    K VALF+  KK A PPAK
Sbjct: 1   MASLAASTAAASLGVSEMLGNPLNFSGVARSAAPTASSPVTFKTVALFS--KKKAAPPAK 60

Query: 61  SKAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKP 120
             AK A ASP DDELAKWYGPDRRIFLPDGLLDR +IPEYL GEVPGDYGYDPFGL KKP
Sbjct: 61  --AKPAAASPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 120

Query: 121 EDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 180
           EDFAKYQAFELIHARWAMLGAAG +IPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG
Sbjct: 121 EDFAKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 180

Query: 181 KNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVK 240
           KNIPINLV+AV+AEV+L+GGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAA+LKVK
Sbjct: 181 KNIPINLVVAVIAEVILVGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAAILKVK 240

Query: 241 EIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           EIKNGRLAMF+M  F+ QAYVTG+GPVENL+ HLSDPFGNNLLTVI G AER PTL
Sbjct: 241 EIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGNAERAPTL 292

[Close]

BLAST of Spo01700.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUQ7_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=SOVF_146400 PE=3 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 8.400e-169
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKS 60
           MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKS
Sbjct: 1   MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKS 60

Query: 61  KAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPE 120
           KAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPE
Sbjct: 61  KAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPE 120

Query: 121 DFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 180
           DFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK
Sbjct: 121 DFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 180

Query: 181 NIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKE 240
           NIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKE
Sbjct: 181 NIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKE 240

Query: 241 IKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           IKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL
Sbjct: 241 IKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 295

[Close]

BLAST of Spo01700.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D2L3_BETVU (Chlorophyll a-b binding protein, chloroplastic OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g004060 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 3.800e-145
Identity = 261/296 (88.18%), Postives = 272/296 (91.89%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRSATSA-PCSTPSVGPCKIVALFNFGKKAATPPAK 60
           MASVAASTAAACLGKSE+LGN LNLR+ATS+ P ST SVGPCKIVALF  GKK A  PAK
Sbjct: 1   MASVAASTAAACLGKSEMLGNPLNLRNATSSTPSSTSSVGPCKIVALF--GKKKAAAPAK 60

Query: 61  SKAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKP 120
             AK A  S  DDELAKWYGPDRRIFLPDGLLDR +IPEYLNGEVPGDYGYDPFGLGKKP
Sbjct: 61  --AKPAAVSATDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLGKKP 120

Query: 121 EDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 180
           EDFAKYQA+ELIHARWAMLGAAG +IPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG
Sbjct: 121 EDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 180

Query: 181 KNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVK 240
           KNIPINL+ AVVAEVVLLGGAEY+RITNGLD EDKLHPGGPFDPLGLA DPD+AALLKVK
Sbjct: 181 KNIPINLIAAVVAEVVLLGGAEYFRITNGLDLEDKLHPGGPFDPLGLANDPDKAALLKVK 240

Query: 241 EIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           EIKNGRLAMFSM  FFIQAYVTGQGPVENLSAHLSDPFGNNLLTVI G+AER+PTL
Sbjct: 241 EIKNGRLAMFSMLGFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVISGSAERIPTL 292

[Close]

BLAST of Spo01700.1 vs. UniProtKB/TrEMBL
Match: A0A165XW56_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_014049 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 1.100e-136
Identity = 247/295 (83.73%), Postives = 264/295 (89.49%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKS 60
           MAS+AASTAAA +G SE+LGN+LN  S T+   S+P+    K VALF  GKKAA PP K+
Sbjct: 174 MASLAASTAAASIGVSEMLGNTLNFSSRTAPSASSPAT--FKTVALF--GKKAAPPPKKA 233

Query: 61  KAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPE 120
                VA+P  DELAKWYGP+RRIFLP+GLLDR +IPEYLNGEVPGDYGYDPFGLGKKPE
Sbjct: 234 ----VVAAPESDELAKWYGPERRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLGKKPE 293

Query: 121 DFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 180
           DFAKYQA+ELIHARWAMLGAAG +IPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGK
Sbjct: 294 DFAKYQAYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGK 353

Query: 181 NIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKE 240
           NIPINLVLAVVAEVVLLGGAEYYRITNGLD EDKLHPGGPFDPLGLA DPDQAALLKVKE
Sbjct: 354 NIPINLVLAVVAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLADDPDQAALLKVKE 413

Query: 241 IKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           IKNGRLAMF+M  FFIQAYVTG+GPVENLSAHLSDPFGNNLLTVIGGAAER PTL
Sbjct: 414 IKNGRLAMFAMLGFFIQAYVTGEGPVENLSAHLSDPFGNNLLTVIGGAAERAPTL 460

[Close]

BLAST of Spo01700.1 vs. UniProtKB/TrEMBL
Match: M5W8B8_PRUPE (Chlorophyll a-b binding protein, chloroplastic OS=Prunus persica GN=PRUPE_ppa009496mg PE=3 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.500e-133
Identity = 245/297 (82.49%), Postives = 263/297 (88.55%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRS--ATSAPCSTPSVGPCKIVALFNFGKKAATPPA 60
           MAS+AASTAAA LG SELLGNSLN  S  A SAP +T +    K VALF+  KK A PP 
Sbjct: 1   MASLAASTAAASLGVSELLGNSLNNFSGAARSAPSAT-TPATFKTVALFS--KKKAAPPP 60

Query: 61  KSKAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKK 120
           K+KA     +PAD+ELAKWYGPDRRIFLP+GLLDR +IPEYL GEVPGDYGYDPFGLGKK
Sbjct: 61  KAKA----VAPADEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLGKK 120

Query: 121 PEDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYF 180
           PE+F+KYQA+ELIHARWAMLGAAG +IPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYF
Sbjct: 121 PENFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYF 180

Query: 181 GKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKV 240
           GKNIPINL+ AVVAEVVLLGGAEYYRITNGLD EDKLHPGGPFDPLGLAKDPDQAALLKV
Sbjct: 181 GKNIPINLIFAVVAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQAALLKV 240

Query: 241 KEIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           KEIKNGRLAMFSM  FF+QAYVTG+GPVENL+ HLSDPFGNNLLTVIGG+ ER PTL
Sbjct: 241 KEIKNGRLAMFSMLGFFLQAYVTGEGPVENLAKHLSDPFGNNLLTVIGGSVERAPTL 290

[Close]

BLAST of Spo01700.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TRX6_GOSRA (Chlorophyll a-b binding protein, chloroplastic OS=Gossypium raimondii GN=B456_009G262000 PE=3 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 5.700e-133
Identity = 241/296 (81.42%), Postives = 256/296 (86.49%), Query Frame = 1


		  
Query: 1   MASVAASTAAACLGKSELLGNSLNLRSATSAPCSTPSVGPC-KIVALFNFGKKAATPPAK 60
           MAS+AASTAAA LG SE+LGN LN      +   TPS     K VALF+  KK A PP  
Sbjct: 1   MASLAASTAAASLGVSEMLGNPLNFSGGARSSAPTPSNSSTFKTVALFS--KKKAAPP-- 60

Query: 61  SKAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKP 120
            K K A  +PAD+ELAKWYGPDRRIFLP+GLLDR +IPEYLNGEVPGDYGYDPFGL KKP
Sbjct: 61  -KPKAAAVAPADEELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKP 120

Query: 121 EDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 180
           EDFAKYQA+ELIHARWAMLGAAG +IPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG
Sbjct: 121 EDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 180

Query: 181 KNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVK 240
           KNIPINLV+AVVAEVVL+GGAEYYRI NGLD EDKLHPGGPFDPLGLAKDPDQAALLKVK
Sbjct: 181 KNIPINLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVK 240

Query: 241 EIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           EIKNGRLAMF+M  FF+QAYVTG+GPVENLS HLSDPFGNNLLTVI G AER PTL
Sbjct: 241 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLSKHLSDPFGNNLLTVIAGTAERAPTL 291

[Close]

BLAST of Spo01700.1 vs. ExPASy Swiss-Prot
Match: CB5_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=1 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 7.100e-129
Identity = 236/288 (81.94%), Postives = 248/288 (86.11%), Query Frame = 1


		  
Query: 11  ACLGKSELLGNSLNLR--SATSAP-CSTPSVGPCKIVALFNFGKKAATPPAKSKAKVAVA 70
           A LG SE+LG  LN R  S +SAP  S+PS    K VALF+  K A   PAKSKA     
Sbjct: 2   ASLGVSEMLGTPLNFRAVSRSSAPLASSPST--FKTVALFSKKKPA---PAKSKA----V 61

Query: 71  SPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQA 130
           S   DELAKWYGPDRRIFLPDGLLDR +IPEYLNGEV GDYGYDPFGLGKKPE+FAKYQA
Sbjct: 62  SETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQA 121

Query: 131 FELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV 190
           FELIHARWAMLGAAG +IPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV
Sbjct: 122 FELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV 181

Query: 191 LAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLA 250
           LAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNGRLA
Sbjct: 182 LAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLA 241

Query: 251 MFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           MF+M  FFIQAYVTG+GPVENL+ HLSDPFGNNLLTVI G AER PTL
Sbjct: 242 MFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280

[Close]

BLAST of Spo01700.1 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.500e-57
Identity = 128/261 (49.04%), Postives = 160/261 (61.30%), Query Frame = 1


		  
Query: 25  LRSATSAPCSTPSVGPCKIVALFNFGKKAATPPAKSKAKVAVASPADDELAKWYGPDRRI 84
           + S+T A  ST   G    V    FG+   T     +   A A PA    + WYGPDR +
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSLFGEARVT----MRKTAAKAKPAASSGSPWYGPDRVL 60

Query: 85  FLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAMLGAAGCV 144
           +L  G L  +  P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWAMLGA GCV
Sbjct: 61  YL--GPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 120

Query: 145 IPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VLAVVA-EVVLLGGAE 204
            PE   + G   G EAVWFK G+ +     L+Y G    I+   +LA+ A +VVL+G  E
Sbjct: 121 FPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIE 180

Query: 205 YYRITNGL--DFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFSMFAFFIQAY 264
            YR+  G   +  D L+PGG FDPLGLA DP+  A +KVKE+KNGRLAMFSMF FF+QA 
Sbjct: 181 GYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAI 240

Query: 265 VTGQGPVENLSAHLSDPFGNN 281
           VTG+GP+ENL+ HL+DP  NN
Sbjct: 241 VTGKGPLENLADHLADPVNNN 253

[Close]

BLAST of Spo01700.1 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 9.500e-57
Identity = 119/227 (52.42%), Postives = 147/227 (64.76%), Query Frame = 1


		  
Query: 59  KSKAKVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKK 118
           K+  K +VA+  D   + WYGPDR ++L        + P YL GE PGDYG+D  GL   
Sbjct: 47  KATGKKSVAASID---SPWYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSAD 106

Query: 119 PEDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYF 178
           PE FAK +  E+IH+RWAMLGA GCV PE   + G   G EAVWFK GA +     L+Y 
Sbjct: 107 PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYL 166

Query: 179 GKN--IPINLVLAVVA-EVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPDQA 238
           G    I    +LA+ A +V+L+G  E YR+  G   +  D ++PGG FDPLGLA DPD  
Sbjct: 167 GSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAF 226

Query: 239 ALLKVKEIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNN 281
           A LKVKEIKNGRLAMFSMF FF+QA VTG+GP+ENL+ HL+DP  NN
Sbjct: 227 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266

[Close]

BLAST of Spo01700.1 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.100e-56
Identity = 113/211 (53.55%), Postives = 138/211 (65.40%), Query Frame = 1


		  
Query: 76  KWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARW 135
           ++YGPDR  FL  G    +D PEYL GE PGDYG+D  GL   P+ FA+Y+  ELIHARW
Sbjct: 32  EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARW 91

Query: 136 AMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN---LVLAVVA 195
           A+LGA G + PE  +++      E VWFK GA +     LNY G    I+   ++  +  
Sbjct: 92  ALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAV 151

Query: 196 EVVLLGGAEYYRITNG----LDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAM 255
           +VVL+G AE YR   G    LD  D L+PGGPFDPLGLA DPD  A LKVKEIKNGRLAM
Sbjct: 152 QVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAM 211

Query: 256 FSMFAFFIQAYVTGQGPVENLSAHLSDPFGN 280
           FS   FF+QA VTG+GPV+NL+ HL+DP  N
Sbjct: 212 FSCLGFFVQAIVTGKGPVQNLTDHLADPTVN 240

[Close]

BLAST of Spo01700.1 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.100e-56
Identity = 114/216 (52.78%), Postives = 142/216 (65.74%), Query Frame = 1


		  
Query: 70  ADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFE 129
           A    + WYGPDR ++L        + P YL GE PGDYG+D  GL   PE+FAK +  E
Sbjct: 51  ASASTSPWYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELE 110

Query: 130 LIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--V 189
           +IH RWAMLGA GCV PE   + G   G EAVWFK GA +     L+Y G    ++   +
Sbjct: 111 VIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 170

Query: 190 LAVVA-EVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNG 249
           LA+ A +V+L+G  E YRI  G   +  D ++PGG FDPLGLA+DP+  A LKVKEIKNG
Sbjct: 171 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNG 230

Query: 250 RLAMFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNN 281
           RLAMFSMF FF+QA VTG+GP+ENL+ HL+DP  NN
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262

[Close]

BLAST of Spo01700.1 vs. TAIR (Arabidopsis)
Match: AT4G10340.1 (light harvesting complex of photosystem II 5)

HSP 1 Score: 461.5 bits (1186), Expect = 4.000e-130
Identity = 236/288 (81.94%), Postives = 248/288 (86.11%), Query Frame = 1


		  
Query: 11  ACLGKSELLGNSLNLR--SATSAP-CSTPSVGPCKIVALFNFGKKAATPPAKSKAKVAVA 70
           A LG SE+LG  LN R  S +SAP  S+PS    K VALF+  K A   PAKSKA     
Sbjct: 2   ASLGVSEMLGTPLNFRAVSRSSAPLASSPST--FKTVALFSKKKPA---PAKSKA----V 61

Query: 71  SPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQA 130
           S   DELAKWYGPDRRIFLPDGLLDR +IPEYLNGEV GDYGYDPFGLGKKPE+FAKYQA
Sbjct: 62  SETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQA 121

Query: 131 FELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV 190
           FELIHARWAMLGAAG +IPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV
Sbjct: 122 FELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV 181

Query: 191 LAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLA 250
           LAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNGRLA
Sbjct: 182 LAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLA 241

Query: 251 MFSMFAFFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 296
           MF+M  FFIQAYVTG+GPVENL+ HLSDPFGNNLLTVI G AER PTL
Sbjct: 242 MFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280

[Close]

BLAST of Spo01700.1 vs. TAIR (Arabidopsis)
Match: AT1G29930.1 (chlorophyll A/B binding protein 1)

HSP 1 Score: 213.4 bits (542), Expect = 1.900e-55
Identity = 119/245 (48.57%), Postives = 150/245 (61.22%), Query Frame = 1


		  
Query: 50  GKKAATPPAKSKA--------KVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLN 109
           GK     PA S+         +  VA P     + WYG DR  +L        + P YL 
Sbjct: 15  GKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPF---SGESPSYLT 74

Query: 110 GEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAV 169
           GE PGDYG+D  GL   PE FA+ +  E+IH+RWAMLGA GCV PE   + G   G EAV
Sbjct: 75  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAV 134

Query: 170 WFKTGALLLDGNTLNYFGKNIPINL--VLAVVA-EVVLLGGAEYYRIT-NGL--DFEDKL 229
           WFK G+ +     L+Y G    ++   +LA+ A +V+L+G  E YR+  NG   + ED L
Sbjct: 135 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLL 194

Query: 230 HPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSD 281
           +PGG FDPLGLA DP+  A LKVKE+KNGRLAMFSMF FF+QA VTG+GP+ENL+ HL+D
Sbjct: 195 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 254

[Close]

BLAST of Spo01700.1 vs. TAIR (Arabidopsis)
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2)

HSP 1 Score: 213.0 bits (541), Expect = 2.500e-55
Identity = 119/245 (48.57%), Postives = 150/245 (61.22%), Query Frame = 1


		  
Query: 50  GKKAATPPAKSKA--------KVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLN 109
           GK     PA S+         +  VA P     + WYG DR  +L        + P YL 
Sbjct: 15  GKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPF---SGESPSYLT 74

Query: 110 GEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAV 169
           GE PGDYG+D  GL   PE FA+ +  E+IH+RWAMLGA GCV PE   + G   G EAV
Sbjct: 75  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAV 134

Query: 170 WFKTGALLLDGNTLNYFGKNIPINL--VLAVVA-EVVLLGGAEYYRIT-NGL--DFEDKL 229
           WFK G+ +     L+Y G    ++   +LA+ A +V+L+G  E YR+  NG   + ED L
Sbjct: 135 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLL 194

Query: 230 HPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSD 281
           +PGG FDPLGLA DP+  A LKVKE+KNGRLAMFSMF FF+QA VTG+GP+ENL+ HL+D
Sbjct: 195 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 254

[Close]

BLAST of Spo01700.1 vs. TAIR (Arabidopsis)
Match: AT1G29910.1 (chlorophyll A/B binding protein 3)

HSP 1 Score: 213.0 bits (541), Expect = 2.500e-55
Identity = 119/245 (48.57%), Postives = 150/245 (61.22%), Query Frame = 1


		  
Query: 50  GKKAATPPAKSKA--------KVAVASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLN 109
           GK     PA S+         +  VA P     + WYG DR  +L        + P YL 
Sbjct: 15  GKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPF---SGESPSYLT 74

Query: 110 GEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAV 169
           GE PGDYG+D  GL   PE FA+ +  E+IH+RWAMLGA GCV PE   + G   G EAV
Sbjct: 75  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAV 134

Query: 170 WFKTGALLLDGNTLNYFGKNIPINL--VLAVVA-EVVLLGGAEYYRIT-NGL--DFEDKL 229
           WFK G+ +     L+Y G    ++   +LA+ A +V+L+G  E YR+  NG   + ED L
Sbjct: 135 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLL 194

Query: 230 HPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGQGPVENLSAHLSD 281
           +PGG FDPLGLA DP+  A LKVKE+KNGRLAMFSMF FF+QA VTG+GP+ENL+ HL+D
Sbjct: 195 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 254

[Close]

BLAST of Spo01700.1 vs. TAIR (Arabidopsis)
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1)

HSP 1 Score: 212.2 bits (539), Expect = 4.200e-55
Identity = 113/209 (54.07%), Postives = 137/209 (65.55%), Query Frame = 1


		  
Query: 77  WYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 136
           WYGPDR  +L       ++ P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 49  WYGPDRPKYLGPF---SENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 108

Query: 137 MLGAAGCVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-E 196
           MLGA GC  PE  +K G   G EAVWFK G+ +     L+Y G    I    +LA+ A +
Sbjct: 109 MLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQ 168

Query: 197 VVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFSM 256
           VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMFSM
Sbjct: 169 VVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSM 228

Query: 257 FAFFIQAYVTGQGPVENLSAHLSDPFGNN 281
           F FF+QA VTG+GP+ENL  HL+DP  NN
Sbjct: 229 FGFFVQAIVTGKGPIENLFDHLADPVANN 253

The following BLAST results are available for this feature:

BLAST of Spo01700.1 vs. NCBI nr
BLAST of Spo01700.1 vs. UniProtKB/TrEMBL
BLAST of Spo01700.1 vs. ExPASy Swiss-Prot
BLAST of Spo01700.1 vs. TAIR (Arabidopsis)

BLAST of Spo01700.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902183996\|gb\|KNA10221.1\|	1.2e-168	100.	hypothetical protein SOVF_1464...	[more]
gi\|731311511\|ref\|XP_010669870.1\|	5.4e-145	88.1	PREDICTED: chlorophyll a-b bin...	[more]
gi\|1021040808\|gb\|KZM98589.1\|	1.6e-136	83.7	hypothetical protein DCAR_0140...	[more]
gi\|645264703\|ref\|XP_008237804.1\|	9.6e-134	82.8	PREDICTED: chlorophyll a-b bin...	[more]
gi\|1009143917\|ref\|XP_015889517.1\|	9.6e-134	82.4	PREDICTED: chlorophyll a-b bin...	[more]

BLAST of Spo01700.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QUQ7_SPIOL	8.4e-169	100.	Chlorophyll a-b binding protei...	[more]
A0A0J8D2L3_BETVU	3.8e-145	88.1	Chlorophyll a-b binding protei...	[more]
A0A165XW56_DAUCA	1.1e-136	83.7	Uncharacterized protein OS=Dau...	[more]
M5W8B8_PRUPE	1.5e-133	82.4	Chlorophyll a-b binding protei...	[more]
A0A0D2TRX6_GOSRA	5.7e-133	81.4	Chlorophyll a-b binding protei...	[more]

BLAST of Spo01700.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CB5_ARATH	7.1e-129	81.9	Chlorophyll a-b binding protei...	[more]
CB29_MAIZE	2.5e-57	49.0	Chlorophyll a-b binding protei...	[more]
CB2A_PINSY	9.5e-57	52.4	Chlorophyll a-b binding protei...	[more]
CB2_DUNTE	2.1e-56	53.5	Chlorophyll a-b binding protei...	[more]
CB2B_PINSY	2.1e-56	52.7	Chlorophyll a-b binding protei...	[more]

BLAST of Spo01700.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G10340.1	4.0e-130	81.9	light harvesting complex of ph...	[more]
AT1G29930.1	1.9e-55	48.5	chlorophyll A/B binding protei...	[more]
AT1G29920.1	2.5e-55	48.5	chlorophyll A/B-binding protei...	[more]
AT1G29910.1	2.5e-55	48.5	chlorophyll A/B binding protei...	[more]
AT2G05100.1	4.2e-55	54.0	photosystem II light harvestin...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 5..295 score: 2.1E
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 97..258 score: 7.3
IPR023329	Chlorophyll a/b binding protein domain	GENE3D	1.10.3460.10		coord: 94..283 score: 1.9
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 77..285 score: 4.05
None	No IPR available	PANTHER	PTHR21649:SF16	CHLOROPHYLL A-B BINDING PROTEIN CP26, CHLOROPLASTIC	coord: 5..295 score: 2.1E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009744	response to sucrose
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010196	nonphotochemical quenching
cellular_component	GO:0009517	PSII associated light-harvesting complex II
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009783	photosystem II antenna complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005524	ATP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11286	0.82	Barchart \| Table
Spo18002	0.79	Barchart \| Table
Spo25087	0.78	Barchart \| Table
Spo00116	0.77	Barchart \| Table
Spo19861	0.77	Barchart \| Table
Spo21495	0.73	Barchart \| Table
Spo11309	0.68	Barchart \| Table
Spo03202	0.68	Barchart \| Table
Spo06391	0.65	Barchart \| Table
Spo09766	0.65	Barchart \| Table