Spo01827 (gene)

Overview
NameSpo01827
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNuclear transport factor 2 (NTF2) family protein
Locationchr2 : 11586247 .. 11595730 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTTACACGTATTACATTAACGACCACCGGTACCACACACATTCATCTTCCTCCCACAGACCTGAGAAATCAAAAGTAGTAAAACAATGTCACTCCTTCACACCAACTGCTTCCTCAACTCACCTCATCCCCTTCCCTTCAAACCCAGAAAGCATCATCATCATCTCCTCTCATTTTCACCCTACTTTCTCTCTCCTCCTCCTCCTCCTCCAATTTCTACAACATTCCCCAAAACAACGTACCTTCCTTTTAAACCCTCGGCGTCTCTGCAGCCGGTTTCATTTGTTGATCATAATACTTCTCCTCCATTGATTTCAGCAACTGATGTTGTCAGAAACTTCTATGGCGGTGTCAACCGTCATGATCTTTCCTCAGTTGCGCCCTTAATTGCGGATGATTGTGTTTATGAGGATCTTGTCTTTCTCCGTCCCTTTGTTGGTCGGAAGGTAACATTTTTTGAATTAGTTTATTTATTTGATTGATTTTTCTGTTCAATTAAATTGGTGATTATAATAATCAGTACAATGATTCATAGTGCAAGTGCGAGTAAGATTTTTTTAATTTTTTTTTGATTTTTATGTAAGCTTTAACAAATAGATTAAAAGTTCAGCAAATCACAGTGATAAAGTTCATGGATCAAAACATCCGAAACAAAATCGGGGGCTTGTTCAATAATACATAAATTATAGATTTATAGGTAGCTATGATATCAGTTCTGCACATTTTTGCTAATCTGTAAGCAGCATCTTTGTTAGTGTTCCTTGCCTTAAACTCAAGCCTAATCTCATGCATCCGCATAAAGAGGTCCCTGCATTGTTTAACAATAATGAAGTTAGCATCCTTGATAGTGTCCTTTTGAACAATTCTGGTTATTGCTTGTTGCGAATCCAAATTAACAATCACTCGAGTCCAGCCCCTATCCTCAATAATCTGCAGAGCTGCGAGAAAATGGCTTCCCATAAGAGTTGTTTGAGTGCAGCATTTCTGCAGAAAACCAAGCACCCATACACCAAGGTGATCTCTAGCAATTCCTGCGATACTAGCATCTGATTCCATATCTATAAAAGAGGGCTCACAATTGAATTTGAGCCAACTGGTAGGGGGGTTTCCAAGTGGGGAGGTTGCTTGTGGAATGTAAGGGAGTGTGGTGTTTCCAAGCGAGTGTTTGAGCTTCCAAATGCACCTATCCGTCGAGGTTTGTGTTGGTTAAAGACAAAGGAGTTTCTCCTTTTTCATATGGACTATAGGACCGAGGGAAAACGAGTTCTTCAAGGTACGGAAATGTGAAATGAGGAGGGGGGGGGGGGGGTTGAGTGAGGTTAGAGTGAAGCTAAAACTGAATAGGGGGTTCGAAGAATGAATAATCAACCCTGAGGTGTTGCAAAATTTCTTTCGCTTGATAACAATCCCTAAGAACAAGGAGGATGTTCTCAGGAGCCTCATTACACCAAGCACAAATATTAGAAGGGCAGATATGCCTCCCAAATAGAGCACACTTATGAGGAAGTCTATCATGGAAAGCAACCCATAGAAAAATTATAATTTTGGGAAGAGTATCCGTTTTCAAAATCCATTTCCAAGAGCAATCGAGAGTTGGAATAGAGTTTTGCACATCAGCCATTGCTTTTTGAAAATTAAATTTTTCATTTAAAGTAAACTCTGGAAAAACAAAATCATCTTGAGTTTCTAGTTGCTCATGGAGGGGGGCAGAACCACAAATCTGATTCACACAAGGGGGAAAAGAGAAAGAGAGAGAAGAAAAGTCCCACCTCCCATTTTGGATACAATGACTAACAGAGAGCTCAATCTCACACTCGAATAAAGGCCCATGAATGAGGTTACGAAGAAAAGACCCCCCAACCCACTTACCCTCCCACAAGTTGACACTAACACCGTTCCCAATTCCAAGATATCAGACTTGAACATGACCCATGGCTTTCCACAAGTGAGATCCTTCTTAAAGATGCTATTGGACTTTGAATATTTATCTTTTAAGACCCAGACAACAAAGTTCTCTTCTTGGTGGATCAATCTCCACCATCATTTGAGAGGATGCACTCTATTCAAATCCCTAACACACCTAATTCCTAAGCCCCCTCCTCTTTGGGTTTCGCAATCTTTTCCCAACTTAGTAAATGTAAGCCCCTCTTATCTCGCTCTTTTCTCAACAACTTTTTTTTCCAAACAACTATTAATGGATTTAAGGATAGACTCAGTCAAAAGGAGACATTGCATATAATAATTGGGAACCGTGTTGAGAATAGAGAAGATGAGACACAATCTGCCAGTTTTATGCATAATAAACTGACCCTTGGCCTTGGTGGAACTAGTACCCGAGATTGGAAACCCAAGTACGAGTTAATATCATTTGCCTCTTGAATTTCCAAGGCATCATTGAAGATTGATCTATCACTAGGGATGGTATTTTTTGAGAAAAGAACCCTACTCTTGCCTATGCTTATTGTTTGACCTGAGATTTCACAAAAAGTATCCAGAAAATGCTTAAGGACCGAAATATCCACTTGAAGTTTCTCCAAACAACAAAATATCATCAACCAAACAGGATATGAGAAATAGGGACATGCTTTCTACCCATGCTAAAAGGAGTCCAAGGGAGTTTCTCAACCGACTCATGAATCATTTAAGACAACACCTCCATACATATGATGAAAATATAAGGGGAAAGAGGATCGCCTTGCCGAATGCCCCTCGTTGGGATAAATGAGTCAGAAGGGATGCCATTAACTGAATCCGAGGAGGAGACCGATTAGATACAACTCATAATAAGATTGACATAATGAACACCAAGACCTAATGAACCTCCATTCTAATTTATCATATTGTGATATTGTTAATGTGTTGAATCTGCGGTGTTTCTTGTATGTACTACAATTATGTCAGCCGAAAAATTTATTGTAAGGACATTGTTATGGGCGGACAACGCTGCCTCTGCAATTGGTAAAAGGTACACCCGGTTGTACGTAGCTCTACATGCAACCGGGTAGTTTTGGTTTTTAACCCCTTAAAAAGCACAATTTCAGAGTTTAAAGCACATTTTTACAGGTTAAAGTAAAATATCTTAAAAGCAGATACATTTCAAAAGAACACATTGTTAGTACAAAAGAATATACGAGCGCGAATAATTTGAGAGGATATGTAAACTGATGTTGGTTGCTCACCTTTTAAGTTTAGGTTTTTTTCCCAATTGGAAGAAGATCGATATTCAATATCATAATATTTGAAAAACATATGTGCATTAAAATTGTAAAAATGTGCTTTTAAACTGAAAATGTGCTTTTAAACTGAAAAATGTGCTTTTTTTGAGGGATTAAAAAATACAAAACGATCCGGTTGCACGTAGAGCTACGTACAACCGGGTGTACCTAATAATTTGTGCTGCCTCTGAGTGTCACTTTGTGGCATCCACAACCGGTCCCAAGCCCGGATAAAGGAGGAGGGTTGAGGCAAGCTTGTGGCTGCCAGCGTAAAACATAGTCACATCTTCTGGACATGAATCGAACGGTTCATGTTAGCCGATCCCAATCATTTTTGGGACCAAGGCTTGAAAGAAGAAGAAGAAGAATTTCGACACTATTATGGGCAGGACAACTCAATACTTGCCAAAAGCATGGTTTTGGCACATTCCCACTTTCTTTTTTCTCGGAGGTGGGGGTTTAGAGAAGAAATTTGTTAATTAGTTTTGACATATACTAAATGGAATTGGGTTTGAACTGTGGACATGTAGTTGTGGTAGAAAAGTCTTGGAGCTGAAAAGGCATATTTAAGTAATTTAAGGACGTTTTTTGTGTTCCTCGAAAAAGATAAGGGAGTACTTTGGGAAGAATAAGGTTGACTGTGAAGGAAGGGGGATTCCTTTCTTGTGGAAATGGAAGATACCCTGTGACACTTGTGTTAGGGACTTAGGATCAATGGTTGCAAGCTCCATCATAATTCCGCCAGCATACCTTTGCGCCTTTGCTTTTAGCGCTTGATGTGGCTCCACTTTGCGCCTACTAAACTTGTTTAGACGTGTTCTTCACTTTCCCATTAAACGAGTTCTTTGCTTCACTTTCCTATTATAATTTATTTAGACGTGTTTTTCATTCACCATAGTGCAATTCAGAAATAATCCCTGTTCAATCATCAAATATAAAGGTGAAAGGTTACTACTGATAGATGGAATGGACTGGTGGGCTTGTATATTTCTTCCGAACTTTCCATCCCCTTCACAATCAATTTTGAATGTTTAAAATATGCAAAAAACATCAACTTTCTCTTCTGCACTTTTCAGCTGGCTAGTGACCTTCGAAGAGTCGATTCATAATGGAAATGCAAGGTTAGACCATTTTTAGTGTGTCTTGAGTATGACTGGAGCACTTTTACATATTCCATGAAGTTTCACCTTATCACAGTCCATTTGACTAATGAAGAAGCTCTGATAATCTTCAGTGTGCGTGACCTGCAGATTCATCTTAATTACATAAATTCTCTACCTTTGAACTTTGGAGTTTGTTCAGAAATTGAAGAACCCTGGGATTTTTGAGTCCCTTTTAGAATGTGTACTGATTGTAAATAGTGTGGGTAATCTCATATCTTACAGTTTGCTCTAGTTCTAGACTGAATCGTAGAGGTCCATTAAGCTTGACTGCTGAGATAGCTATTGTGCTTTTTCTGTCGTCAGTTTTATGCGTGCTTGCTCACCTATTAGTATACCACTGATAGGCTGATAGCAATATTATGATCTATGGGTTAAAACAATCCTCCCCCTAGGAAAAAATCACGACCTTTATTTCTCTTTTATCTCAATTCTCAACCTTATTTTCATATTTTTTTCATTATGAAGCTTCACATTTCACTTTCGGGTATCCACAGTCTATCCTGGAGTTCTTCGGGAAGTTTACTGATTATGTCAGCACCAGTTTGCAGTTTGTGATTGATGCTATCTCCGAGGAAGATTCATCTGCTGTTGGTGTGACATGGCATTTGGGTAATAGAAAAAATATTTGAATCTCTTCCTATGTTATCCTTGGTATATTTTGATGGCAACTGACTGAAGAAATACAGAATGGAATGGGCGCCCCTTTCCGTTTAGCAAAGGTTGCAGCTTTTATCAATTGAGGGTAGTAAATGGTATTCGACAAATAATGTAAGGCTGCGTTCTATTCACCTGATTTTCACTTATTTTTTCTGAACTTATTAGAATTTATAAAAACTTATTTTAGTTATAAATTGTACTTGGGTATCCCTTATTTTTCCGGAACTTATCTTATCTGAAGTTATTTTAACTAAAATAAGTGAAAATATGGTGAACAAAACAGAACCTAAGTATCAATTTTTCCAGGATACAACTATCTGGAATCTGGATATTCATTATTGTATACATAATGATTTGAACTGGCGTGGTACTTATTTGCTATAGTTGATGTTCCTCTCCTCTCGAGGAAGAGAAGGGGTGGGGGGCAGAAATAGGGGTGCGTTGCTGAATCTCGTTAGGTATCTTATAATTTTCTGTTTTGTAATTCGACTATCTTCTTACATTGTACAGTAAATATTCACCTTCTCATAGGGTCAAAAGATTGCTCACCTGTTGAACATGCTTTGCTCATCACGAGTAAAACTTTTCAAGAAATTGTAAGCCTGCTCTCAAATTTTAGAAGCTTCAGTGAGTGTTTGTTGGGTACAATCAGGGGTTTTAGAAATCTTTTTTCCTTTTCTGCTATGGGATGGAGTCTATTCTGGTCAAGAATCTAATCTCCTTGTCCAGATTTAGGAGTACATTGTCAGATTTCCTTATATTACGTAATTTGATAGAACATGACTTTACAAAATACGAATGCAAGTAACCTTTATAATAGTTGTCAGTTGTGCCATTATTATCCACTCTCTACTTATTTTTAGTGATAAACCATTACTTTCTAGGAAAGATAACTCTTCCAAATCTTTACGTGAATGTTTCTCTGTGTCTAAAACAGTTATGCTCGAGATAGCGTGGAACCTGCAGTTAAACCTGGAGAATCAGCTTTGGTAAGTTAATTTATTCTTTCAATGATCTAATTTCCTGCCTTCATTATGTGGACCTAATATCATGACAACCAAACAAATCATTTTTTTTTTTTTTTTTGGATAAGCAAGAGAAAATTTTGTATTACTTTGTCAAAAAGAATTTACAACCTAAACAAGCAAAGAAGGAAAGCGAACCTTCTAGGAAGGACCCCCTATTCCTAGACACTTGTAAAACTATAGTAGAGACTTAAACAAAGTCTCCTACATACACCAGCTTTCTAACTATGACAAACAATGCTACTTACAAAGAATTAAGCCTATCTTTATCTATATTTCTGGCTGTACTATTTAAAACAAGGTATGCTCTAGACTTTACAAAGTATTGTATCTGCTGTATTGTTTTGTCCAACATAGGAACCTTCAGGTTGAGGAGGCTTCCAATTTTTATTTTTTATGTAGACATTATGCACCCATTTAACCCACAGATTATACACCTTTTACGCAAGGCCCACACATGCTTTCCTATTGCAGCTTGATTCCAAAGTAGAATGTTCTTAATACACCATGTAACCATGTTTATTACCCTTACTAACACCATGCCAGAAAACATTATTGATCTTCTGCTGAACCGTCTTTGGGAGTAGAAAAATCTGACTCTAGTGAACACAAACACTCATTAGGAATGAATTAACCAGTTGAAGCCTTCCTTCTTATGACAGGTGTTTAGTGCTCCAAATTCATACTCTTGTACACATTTTATCAACCAGGGCTTCACAATCAGCAACTTTAATTTTGTAAGCGCTCATGGGCAAACCCAGGTATCTAATTGGGAGCATACCTATCTTGAACCCAAAAACTCTATTTATCCTGTTTATTTCATGACTTTCCATCCCAGTACAATAGATTTCAGATTTGCTAGCATTAATATGTAACCCGTTAGTCTCAGAAAATAGTTTGAAACCTCCTAGCGCCATACTTACTGAAACCCTAGGGCACGCATCATCTCTTCTATGAAACCCCATTCCGCTGTATCTTAGGCTTTCCTTAAATCTAGTTTTAAATACAACACGCTTGTTTTTGACAACCCTTTTCACCAAATCTTGACACAGTAAGACATTTTGCATTATATTCCTTCTCGTGATGAAAGCACCTTTGGTAGGGCTGATGATATCAGGAAGGACATCATTTAGCTTTTCACAGAGAAGCTTGGTGATTCACTTGTAGATAGTAATATAGTAGAACAACATGCCATTGGTCTAAAGTCCCCTGCTGTATTAGGCACTAAGATTACAGTGGTGATGTTGAGTTAAGTAAGCATTTTACCTGTAATCATTGCATCAGCCACGTCGTTCCCAACAGTTTGCCACATAACTCCTTGAAAAAATGACTGTTGTAGCCATCTAATCCAGGCGCCTTATTTCCAGGAATGGCAAACGTAACTCTTTTGACATCCTTTCTGGTGAAATTACAGTTGAGCAAAGAAAGATCTTCATCACTAAGAGTTTCCCCTTGATTCGCTTTGTTTGTCAAAACAGTTGTTATGTTCTGTTCTCTATTCTTACTCCTAGTAAATTCTGATAAAAAGCTTTAGATACTTCAGCAGGAGTTTCCACCCATTCCCCTTGTTCATTACGGATTCCATTTATAGCATTTCTCACTTTTCTGGCCTTTATGCTGTTATATAAGAGCTTTGAATTTTCATCACCCTCCCTTAACTAGTGAAGTTTAGTTTTTTGTTTCAGTAAAGCATTATAGTTATTTAGAGCATACTCGAGGCATCATAAGCTTTCCTTTCATTTTTGTTTATCTCCACATTGCCCGGAATTTATGCATTTGATCTTGAATTTGCAATAACTCCTGCTTTGTTCTGATTTTTCTGCCTGCAAGGTGTCATGCCCCCTTGTGTCTAGAGCTTTAAGCTCATGTTTCAAAACCTTCAGTTTTGAGATTACTTGAAACACTCTGCAACTCCTGACCTTTGTATTCCAGCATTTTAAATGCTACAATTTCGTTGAATATCTCGTTAAAACACCAGTAATTAAAAGAACCTAAATGGCTTCTTCACAGAATCTCATTTCACTAACACATAGAAAACTCTATGAGCAAAGATGGATCTCCCTTGGGATCCTATGTTGCTCAGAAACGGATTTAAGTGTCATACACCAGTGGCTGGAGTGTCGACCTCCGATGCAAAATTTTGCCGACACGGCGATACAGTCAAATCAGTGTCTTGATTCTTGACTAGTTCTTTAGACATAGCTATCATATCATATAAAGTGCCGGAAAATTCCTACCCCTATTAGTTTAATATGTAAAAATAAGAAAGAAAAGAAAAAAAGGAGGGCACTTAGTTAACTCTCAGTTTTTTTTTTTTTTTTNAAAATAAGAAAGAAAAGAAAAAAAGGAGGGCACTTAGTTAACTCTCAGTTTTTTTTTTTTTTTTACTTTAGAGCTTTTTGGTCCAGGTAATATCTGGTAAGATTAATCTATTCACCGATGATGATTCATCTTTATCTTGGATATCACAAGTTAAACTTTTTTGCTCTATTTTTTTCTTCTCTTTTGATATCGGCACTTGATTTCGTATCCTTTTGCCGACACGGGTGTCAAACACTTTCTCGGACACTACCTGCTGAAAAATGTCATGTCATGTCGAAACCGACTCTCCCGGCCAACAAGGTGTCGAAGTAACATAGCTTGGATCCATTCGCGCAAAAGATCCTTATCCAAAAATGTTAGCAATGTAGTTAGTTGCCATTATAAGAAATTATTCTGACATGATTATTTACAGATTGCTATCAGAGGTGTTACATGGCTGCTGCAGAAATTCCCCAAGCTTGCAGAGCGGTTATAAAGTTATGATAAATAACAGTGGGAAATCAATCACCGCATGGCTTTGGGGTAATTTAGGCTCTGTTTTATTCGACTTTAAAATTTGTCCTAAAATTCTATGTTGTGTGCGTAGTAGAGCTTATTTTCTACTTATCTGCGCTTATTTTGTCGCTAAATCTAACAAAACAGGGCCATACTCGTAGGTTTTTGCAACTTCTTAACAGAAACAGGGAGCGAAGGTACCGATGCATGCTATGAAAGCAATTCCTTGAATATTGGCGAGCATAATAAGGTTTGCAACTGGTCATGTATACACGGTCATTTTGTATAGTTTGAAAGGGGAAAAGGAAAGAACCACGAGCTAGAAACCCCTTATATATCTCCTTTGTATAAGCATGTTTCCTTGTAATTAATTTGTACGGGCATGGTTCATAGCCTCATATAGTGTAGCAGTGGATCAATTTTTGTTTTGTTTTGAAAGGCAAGTAGAAAAGTACATTAAGAGTCCCTCTGTTCGTAAGAAATCACTATCTAAAATTGAAAGTAACTAAGAACCATTACAAGTGTCGGAACATTTGTAATTCAATTTGCTGCAATGCTGCTCGATTTGCTTCTTTGTAGTATTTGATATCCTATTCTTCAAAAAAAA

mRNA sequence

CGTTACACGTATTACATTAACGACCACCGGTACCACACACATTCATCTTCCTCCCACAGACCTGAGAAATCAAAAGTAGTAAAACAATGTCACTCCTTCACACCAACTGCTTCCTCAACTCACCTCATCCCCTTCCCTTCAAACCCAGAAAGCATCATCATCATCTCCTCTCATTTTCACCCTACTTTCTCTCTCCTCCTCCTCCTCCTCCAATTTCTACAACATTCCCCAAAACAACGTACCTTCCTTTTAAACCCTCGGCGTCTCTGCAGCCGGTTTCATTTGTTGATCATAATACTTCTCCTCCATTGATTTCAGCAACTGATGTTGTCAGAAACTTCTATGGCGGTGTCAACCGTCATGATCTTTCCTCAGTTGCGCCCTTAATTGCGGATGATTGTGTTTATGAGGATCTTGTCTTTCTCCGTCCCTTTGTTGGTCGGAAGTCTATCCTGGAGTTCTTCGGGAAGTTTACTGATTATGTCAGCACCAGTTTGCAGTTTGTGATTGATGCTATCTCCGAGGAAGATTCATCTGCTGTTGGTGTGACATGGCATTTGGAATGGAATGGGCGCCCCTTTCCGTTTAGCAAAGGTTGCAGCTTTTATCAATTGAGGGTAGTAAATGGTATTCGACAAATAATTTATGCTCGAGATAGCGTGGAACCTGCAGTTAAACCTGGAGAATCAGCTTTGATTGCTATCAGAGGTGTTACATGGCTGCTGCAGAAATTCCCCAAGCTTGCAGAGCGGTTATAAAGTTATGATAAATAACAGTGGGAAATCAATCACCGCATGGCTTTGGGGGCCATACTCGTAGGTTTTTGCAACTTCTTAACAGAAACAGGGAGCGAAGGTACCGATGCATGCTATGAAAGCAATTCCTTGAATATTGGCGAGCATAATAAGGTTTGCAACTGGTCATGTATACACGGTCATTTTGTATAGTTTGAAAGGGGAAAAGGAAAGAACCACGAGCTAGAAACCCCTTATATATCTCCTTTGTATAAGCATGTTTCCTTGTAATTAATTTGTACGGGCATGGTTCATAGCCTCATATAGTGTAGCAGTGGATCAATTTTTGTTTTGTTTTGAAAGGCAAGTAGAAAAGTACATTAAGAGTCCCTCTGTTCGTAAGAAATCACTATCTAAAATTGAAAGTAACTAAGAACCATTACAAGTGTCGGAACATTTGTAATTCAATTTGCTGCAATGCTGCTCGATTTGCTTCTTTGTAGTATTTGATATCCTATTCTTCAAAAAAAA

Coding sequence (CDS)

ATGTCACTCCTTCACACCAACTGCTTCCTCAACTCACCTCATCCCCTTCCCTTCAAACCCAGAAAGCATCATCATCATCTCCTCTCATTTTCACCCTACTTTCTCTCTCCTCCTCCTCCTCCTCCAATTTCTACAACATTCCCCAAAACAACGTACCTTCCTTTTAAACCCTCGGCGTCTCTGCAGCCGGTTTCATTTGTTGATCATAATACTTCTCCTCCATTGATTTCAGCAACTGATGTTGTCAGAAACTTCTATGGCGGTGTCAACCGTCATGATCTTTCCTCAGTTGCGCCCTTAATTGCGGATGATTGTGTTTATGAGGATCTTGTCTTTCTCCGTCCCTTTGTTGGTCGGAAGTCTATCCTGGAGTTCTTCGGGAAGTTTACTGATTATGTCAGCACCAGTTTGCAGTTTGTGATTGATGCTATCTCCGAGGAAGATTCATCTGCTGTTGGTGTGACATGGCATTTGGAATGGAATGGGCGCCCCTTTCCGTTTAGCAAAGGTTGCAGCTTTTATCAATTGAGGGTAGTAAATGGTATTCGACAAATAATTTATGCTCGAGATAGCGTGGAACCTGCAGTTAAACCTGGAGAATCAGCTTTGATTGCTATCAGAGGTGTTACATGGCTGCTGCAGAAATTCCCCAAGCTTGCAGAGCGGTTATAA

Protein sequence

MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSASLQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01827.1Spo01827.1mRNA


Homology
[Close]
BLAST of Spo01827.1 vs. NCBI nr
Match: gi|902172830|gb|KNA08172.1| (hypothetical protein SOVF_165030 isoform A [Spinacia oleracea])

HSP 1 Score: 461.5 bits (1186), Expect = 8.600e-127
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

		  

Query: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60
           MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS
Sbjct: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60

Query: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120
           LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK
Sbjct: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120

Query: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN 180
           SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN
Sbjct: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN 180

Query: 181 GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL
Sbjct: 181 GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 223
[Close]
BLAST of Spo01827.1 vs. NCBI nr
Match: gi|902172831|gb|KNA08173.1| (hypothetical protein SOVF_165030 isoform B [Spinacia oleracea])

HSP 1 Score: 433.3 bits (1113), Expect = 2.500e-118
Identity = 214/236 (90.68%), Postives = 218/236 (92.37%), Query Frame = 1 

		  

Query: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60
           MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS
Sbjct: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60

Query: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120
           LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK
Sbjct: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120

Query: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLR--- 180
           SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLR   
Sbjct: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRGQK 180

Query: 181 VVNGIRQI----------IYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           + + +  +           YARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL
Sbjct: 181 IAHLLNMLCSSRVKLFKKFYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 236
[Close]
BLAST of Spo01827.1 vs. NCBI nr
Match: gi|731362233|ref|XP_010692783.1| (PREDICTED: uncharacterized protein LOC104905846 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 289.3 bits (739), Expect = 5.900e-75
Identity = 151/227 (66.52%), Postives = 172/227 (75.77%), Query Frame = 1 

		  

Query: 1   MSLLHTNCFLNSPHPLPFKPRKHH----HHLLSFSPYFLSPPPPPPISTTFPKTTYLPFK 60
           MS +H+NC L     +  KPR H+    HHLL  S +       PP S+T  +   + F+
Sbjct: 1   MSHVHSNCCLTFTARITSKPRNHNQHHNHHLLHLSLF-------PPNSSTVSRKRGITFR 60

Query: 61  PSAS--LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLR 120
            S    L P+S +D      LI A+D+VRNFYGG+NRHDL+SV PLIA +CVYEDLVF  
Sbjct: 61  ASLDNPLPPIS-LDQTNPFQLIPASDIVRNFYGGINRHDLASVEPLIAPNCVYEDLVFPS 120

Query: 121 PFVGRKSILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFY 180
           PFVGRKSILEFFGKF DYVST LQFVIDAISEEDS+ VGVTWHLEW GRPFPFSKGCSFY
Sbjct: 121 PFVGRKSILEFFGKFIDYVSTDLQFVIDAISEEDSTTVGVTWHLEWKGRPFPFSKGCSFY 180

Query: 181 QLRVVNGIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAE 222
           +L + NGIRQIIYARDSVEPA+KPGESALIAIRGVTWLLQ+FPKLAE
Sbjct: 181 RLGIKNGIRQIIYARDSVEPAIKPGESALIAIRGVTWLLQRFPKLAE 219
[Close]
BLAST of Spo01827.1 vs. NCBI nr
Match: gi|1009137378|ref|XP_015886021.1| (PREDICTED: uncharacterized protein LOC107421316 [Ziziphus jujuba])

HSP 1 Score: 248.4 bits (633), Expect = 1.100e-62
Identity = 124/195 (63.59%), Postives = 144/195 (73.85%), Query Frame = 1 

		  

Query: 34  FLSPPPPPPISTTFPKTTYLPFKPSAS-----LQPVSFVDHNTSPPLISATDVVRNFYGG 93
           F +P P P + T  P TT      SA        P + VD +    + SA DVVR FYGG
Sbjct: 34  FSTPTPTPLLRTWSPPTTCFRLSSSAERTVSVASPATDVDDDEEGSVDSAADVVRKFYGG 93

Query: 94  VNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVSTSLQFVIDAISEED 153
           +N HDL+SV  LIAD CVYEDLVF RPFVGR+ IL+FF  F   VS  LQFVID +S ED
Sbjct: 94  INAHDLASVEELIADKCVYEDLVFPRPFVGREDILQFFKNFIGSVSKDLQFVIDKLSTED 153

Query: 154 SSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEPAVKPGESALIAIRG 213
           SSAVGVTWHLEW G+PFPFS+GCSFY+L V+NG RQIIY RDSVEPA+KPGE+AL+AIRG
Sbjct: 154 SSAVGVTWHLEWKGKPFPFSRGCSFYELEVINGKRQIIYGRDSVEPAIKPGETALVAIRG 213

Query: 214 VTWLLQKFPKLAERL 224
           VTWLLQ+FP+LA+RL
Sbjct: 214 VTWLLQQFPQLADRL 228
[Close]
BLAST of Spo01827.1 vs. NCBI nr
Match: gi|970062861|ref|XP_015058340.1| (PREDICTED: uncharacterized protein LOC107004593 [Solanum pennellii])

HSP 1 Score: 243.8 bits (621), Expect = 2.800e-61
Identity = 115/149 (77.18%), Postives = 129/149 (86.58%), Query Frame = 1 

		  

Query: 75  LISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVS 134
           L SA  VVR FY G+NR DL SV  LIA+DCVYEDLVF +PFVGRK+IL+FF KFTD V 
Sbjct: 79  LESAASVVRKFYAGINRRDLDSVEELIAEDCVYEDLVFPQPFVGRKAILDFFKKFTDSVG 138

Query: 135 TSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEP 194
           + LQFVID IS+EDSSAVGVTWHLEW GRPFPFSKGCSFY+L VVNG R+I+Y RDSVEP
Sbjct: 139 SDLQFVIDDISKEDSSAVGVTWHLEWRGRPFPFSKGCSFYRLEVVNGQRKILYGRDSVEP 198

Query: 195 AVKPGESALIAIRGVTWLLQKFPKLAERL 224
           AVKPGE+AL+AIRGV WLLQKFP+LA+RL
Sbjct: 199 AVKPGETALVAIRGVAWLLQKFPQLADRL 227
[Close]
BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLQ8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165030 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 6.000e-127
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

		  

Query: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60
           MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS
Sbjct: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60

Query: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120
           LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK
Sbjct: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120

Query: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN 180
           SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN
Sbjct: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN 180

Query: 181 GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL
Sbjct: 181 GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 223
[Close]
BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNA8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165030 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.700e-118
Identity = 214/236 (90.68%), Postives = 218/236 (92.37%), Query Frame = 1 

		  

Query: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60
           MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS
Sbjct: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60

Query: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120
           LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK
Sbjct: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120

Query: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLR--- 180
           SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLR   
Sbjct: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRGQK 180

Query: 181 VVNGIRQI----------IYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           + + +  +           YARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL
Sbjct: 181 IAHLLNMLCSSRVKLFKKFYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 236
[Close]
BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BHP0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g022630 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.100e-75
Identity = 151/227 (66.52%), Postives = 172/227 (75.77%), Query Frame = 1 

		  

Query: 1   MSLLHTNCFLNSPHPLPFKPRKHH----HHLLSFSPYFLSPPPPPPISTTFPKTTYLPFK 60
           MS +H+NC L     +  KPR H+    HHLL  S +       PP S+T  +   + F+
Sbjct: 1   MSHVHSNCCLTFTARITSKPRNHNQHHNHHLLHLSLF-------PPNSSTVSRKRGITFR 60

Query: 61  PSAS--LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLR 120
            S    L P+S +D      LI A+D+VRNFYGG+NRHDL+SV PLIA +CVYEDLVF  
Sbjct: 61  ASLDNPLPPIS-LDQTNPFQLIPASDIVRNFYGGINRHDLASVEPLIAPNCVYEDLVFPS 120

Query: 121 PFVGRKSILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFY 180
           PFVGRKSILEFFGKF DYVST LQFVIDAISEEDS+ VGVTWHLEW GRPFPFSKGCSFY
Sbjct: 121 PFVGRKSILEFFGKFIDYVSTDLQFVIDAISEEDSTTVGVTWHLEWKGRPFPFSKGCSFY 180

Query: 181 QLRVVNGIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAE 222
           +L + NGIRQIIYARDSVEPA+KPGESALIAIRGVTWLLQ+FPKLAE
Sbjct: 181 RLGIKNGIRQIIYARDSVEPAIKPGESALIAIRGVTWLLQRFPKLAE 219
[Close]
BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: K4D832_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 9.800e-61
Identity = 114/149 (76.51%), Postives = 128/149 (85.91%), Query Frame = 1 

		  

Query: 75  LISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVS 134
           L SA  VVR FY G+NR DL SV  LIA+DCVYEDLVF +PFVGRK+IL+FF KFTD V 
Sbjct: 79  LESAASVVRKFYAGINRRDLDSVEELIAEDCVYEDLVFPQPFVGRKAILDFFKKFTDSVG 138

Query: 135 TSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEP 194
           + LQFVID IS+EDSSAVGVTWHLEW GRPFPFSKGCSFY+L VVNG  +I+Y RDSVEP
Sbjct: 139 SDLQFVIDDISKEDSSAVGVTWHLEWRGRPFPFSKGCSFYRLEVVNGQMKILYGRDSVEP 198

Query: 195 AVKPGESALIAIRGVTWLLQKFPKLAERL 224
           AVKPGE+AL+AIRGV WLLQKFP+LA+RL
Sbjct: 199 AVKPGETALVAIRGVAWLLQKFPQLADRL 227
[Close]
BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: B9IQB1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10370g PE=4 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 3.700e-60
Identity = 113/152 (74.34%), Postives = 130/152 (85.53%), Query Frame = 1 

		  

Query: 72  SPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTD 131
           +P + SA+DVVR+FY G+N HDL SV  LIA++CVYEDL+F RPFVGRK+ILEFF KF D
Sbjct: 64  APSVESASDVVRSFYEGINGHDLDSVEELIAENCVYEDLIFPRPFVGRKAILEFFNKFID 123

Query: 132 YVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDS 191
            VS  LQFVID IS EDS AVGVTWHLEW G+ FPFSKGCSFY+L  VNG RQIIY RDS
Sbjct: 124 TVSKDLQFVIDDISNEDSFAVGVTWHLEWKGKSFPFSKGCSFYRLDAVNGKRQIIYGRDS 183

Query: 192 VEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           VEPAVKPGE+AL+AIRGVTWLLQ+FP+LA++L
Sbjct: 184 VEPAVKPGEAALVAIRGVTWLLQRFPQLADQL 215
[Close]
BLAST of Spo01827.1 vs. TAIR (Arabidopsis)
Match: AT1G71480.1 (Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 225.7 bits (574), Expect = 2.800e-59
Identity = 115/191 (60.21%), Postives = 140/191 (73.30%), Query Frame = 1 

		  

Query: 32  PYFLSPPPPPPISTTFPKTTYLPFKPSASLQPVSFVDHNTSPPLISATDVVRNFYGGVNR 91
           P  L+   PP +S ++         P+A     + V   T+P   SA++VV +FY  VN 
Sbjct: 35  PTSLTHSQPPRLSASYG--------PAAKAATANDVVPETAPT--SASEVVSSFYAAVNV 94

Query: 92  HDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVSTSLQFVIDAISEEDSSA 151
           HDLSSV  LIA DCVYEDLVF  PFVGRK+IL+FFGKF +  ST LQFVID IS EDSSA
Sbjct: 95  HDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIESTSTDLQFVIDDISTEDSSA 154

Query: 152 VGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEPAVKPGESALIAIRGVTW 211
           VGV+WHLEW G+ FPFSKGCSFY+L V++G RQI+Y RD VEPA+KPGE+ L AI+GVTW
Sbjct: 155 VGVSWHLEWKGKNFPFSKGCSFYRLEVIDGKRQIVYGRDCVEPAIKPGETVLAAIKGVTW 214

Query: 212 LLQKFPKLAER 223
           LLQKFP+LA++
Sbjct: 215 LLQKFPQLADQ 215
[Close]
BLAST of Spo01827.1 vs. TAIR (Arabidopsis)
Match: AT5G41470.1 (Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 121.7 bits (304), Expect = 5.700e-28
Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = 1 

		  

Query: 64  VSFVDH-NTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSI 123
           VS +D  N+ P  IS  D V  FY  +N  +   ++  I+ DC  +D  F +PF G++  
Sbjct: 60  VSCLDRPNSRPNQISGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEA 119

Query: 124 LEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGI 183
           +EFF +    +  +++F ++ + E D  +  V WHLEW GR  PF++GCSFY+     G 
Sbjct: 120 MEFFEELVKSMGQNVKFCVENVCEGDGHSAAVNWHLEWKGRKIPFTRGCSFYEFIDEGGR 179

Query: 184 RQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAE 222
             I  AR  +E  +KPG   L  ++ +T+L  +FPK AE
Sbjct: 180 LVIRNARILIESPIKPGGITLSLLKNITFLFDEFPKGAE 218
The following BLAST results are available for this feature:
BLAST of Spo01827.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902172830|gb|KNA08172.1|8.6e-127100.hypothetical protein SOVF_1650... [more]
gi|902172831|gb|KNA08173.1|2.5e-11890.6hypothetical protein SOVF_1650... [more]
gi|731362233|ref|XP_010692783.1|5.9e-7566.5PREDICTED: uncharacterized pro... [more]
gi|1009137378|ref|XP_015886021.1|1.1e-6263.5PREDICTED: uncharacterized pro... [more]
gi|970062861|ref|XP_015058340.1|2.8e-6177.1PREDICTED: uncharacterized pro... [more]
back to top
BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QLQ8_SPIOL6.0e-127100.Uncharacterized protein OS=Spi... [more]
A0A0K9QNA8_SPIOL1.7e-11890.6Uncharacterized protein OS=Spi... [more]
A0A0J8BHP0_BETVU4.1e-7566.5Uncharacterized protein OS=Bet... [more]
K4D832_SOLLC9.8e-6176.5Uncharacterized protein OS=Sol... [more]
B9IQB1_POPTR3.7e-6074.3Uncharacterized protein OS=Pop... [more]
back to top
BLAST of Spo01827.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo01827.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G71480.12.8e-5960.2Nuclear transport factor 2 (NT... [more]
AT5G41470.15.7e-2835.8Nuclear transport factor 2 (NT... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009959Polyketide cyclase SnoaL-like domainPFAMPF12680SnoaL_2coord: 82..177
score: 8.9
NoneNo IPR availablePANTHERPTHR33698FAMILY NOT NAMEDcoord: 77..223
score: 4.5
NoneNo IPR availablePANTHERPTHR33698:SF3SUBFAMILY NOT NAMEDcoord: 77..223
score: 4.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0006606 protein import into nucleus
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0008565 protein transporter activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo213820.72Barchart | Table
Spo259530.70Barchart | Table
Spo150790.67Barchart | Table
Spo105870.65Barchart | Table
Spo230780.65Barchart | Table
Spo272500.65Barchart | Table