Spo01938 (gene) | SpinachBase

Overview


Name	Spo01938
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Location	chr2 : 39612697 .. 39615473 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAGCCATGAAATGCAACATGAGATGCATGCGTACAAACTTGTACAAACACCATTTTAATTGCTAGCCATCTATCCAACCAACCAACCAACCAACCAACCAATCCCCCACATTAAACCTAATTAATTAATCAATCAAATATAGACCCTAATTAATTTCTTGTTATAAATGTTCAACTATATAATTTGACCTCATTTGTCAACCCCTTTGTTTAACTTTTTAGGAGTGTCATCAAAATTTTGCCTTTTTTCTCTCCTCCACATAAACTATTCCATTCATTGGCCTTTTCTATCTCTTCTTTCTCTATCCAAAATTCAGAAAACTAAGAAAAATAAATAAAAAAAGAATGGAAGAATATGTGATTAACTTAATAATGGTGGGAGTAATTTCATGGACTACCCTTTTCTTGTTGACAAGAAAATTGTTTGCAAATTACTCGTTTGAGTTTTGCAACAGAATAGTGTCAACAACTCATGCTACTTTAGCTGTGATATTAGCTTCTCAAACTGTTGAAGATTGGAGTTGCCCAGTTTGTCCATTAAACTCAAGTTCTTCTCCTAAACAGGTACGACAATTTTGATTATACAGCCGGTTGTAACTTGTAATATTAATTTGTTTAATTTTTGTTGTAATGTAGATGCAAACATTAGCAGTAACAGTGGGATATTTGATATATGATCTGATATGTTCTCAATTTGACAAAAAATCCAATCTTGATAACACAATTCATCATTTGGTCAGCATTATTGGAATTGCAGCTGGTCTCTCATACCAAAAGGTAATTCTTAAAGCTATGTTCAATATAATTACAACTGAAAATGCGTGATTTTGTTTTGACGGGTTAAGTTTGGAAATTGCAGTGTGGATCAGAGATGGTAGCAGCATTGTTCATAACAGAGATATCAAGTCCATTTCTACACCTAAGGGAGTTTCTCAAAGAAATTGGCTACAAGGACACTGATCTTAATTTGGCTGCTGATGTGAGTTTTTTCCCCAAAATTTCAAGAATTTGTCAGTTTATAATTACAATTTGATCAGTCGTAAGCCACTCGTGACCAAGGAAAAATCAATGTAGTAATAGATTTAATAACTTTATGCTATTTGAAGACACACAAATCATGTGATTTAATTTGAAATTTCATGTTAGTGGTACGTGTTAATTACGGAGTACTGATAGTGTACCCATTATAGACTACGTCCGTTACTGAAAGTTCTTTACAACTTGGAATATGTGCCCAAAGTATGAAAACTTTGACCTTAAATTCTCACTATTATGTACATCAAAATATTAGAATGTAAGATCTTGTTAGATTAATCTCGTTATGTATTTTCAGAATATCAAAATTTATTATTTTTTACATACAAAATTAAATATATTAGTGATTAAATATTGCATTAAAAATCGTGCAAATAGTAAGCGTAACGAACTTAGAACGGAGGTAGGATATAATAGGGTTGATGGTTACATTTTACAGATGGGCTCATGTAGCCAAAATTGATATTTGGACAAATTCCCATATTTTGGCCAAAAAAAAAAAGGAAATCAGGAATTGATGAATACATACATACAACTATACAAATATGTCTTTGTTAGTGGAGATACTATCTAATTAAGGAGTACCACTTTAAATGAATGTTGCATGGCCAATTAATAATAATAGTGATGTTTGTTTGTTTTATGTGGCAGATATTGTTTGCATTAACATTTTCAGTTGCAAGAATGGTAGGAGGTCCGTATCTATTTTTTGTTACTCTATCTGCCAACAACCCACTCCTAATCAAGGTATGTATTTGAGTGTATAATATTAATGACATTGCATATATGTTGATATTTATACATTTAACGTCCTTAATTTTCTTTGTTATCCAGGCAATGGCAACAGGATTACAGCTAGTGAGTGCATTTTGGTTCTACAAAATCTTAAAAATGGTCCAGTATAAACTCACTAAACGAACCAGAGTCAAGAAGTTGGCTTGATTTTGCTTTTTAAAGTCGATCGAATTCAGAACTTGAAATATAATTTGGTAACTAATGACCCAAATTCGTCTCATATATATATATATCGGTTGCAATTTCAAGCATAAATCTAAAGTTCCAATTCGTATATTTTTAACATGATTAACAAATTGAATAGTCAAAGTACCTATTTTTTAGAAGATGATTCGTCCTCTATTCCTAAAACTTGCTATCTAAGTTAATGTGTATAATGATTATTATTTTACTAGATTTGTATTTGATATAAATTAATGAGTATGTTATATTGTTGTACCGATTACTAATTACGGAGTACTGTCGTATGTTCTCTCATTTTTTTTGCAAATTAGGCCGGTCTTACACGAGAAATCAAACGTACATGATTTGTGTCAAAAAGTTGAAACATTCTCCCTCCGTCCCTTAATACTCGCACCGATTTGACCGATGCGGAATTTAAGACATTTAAATTGACTTATTAATTTAATGGGTGATAGTTGATAGTTGGTTATTTTTTAATATAGTTAGTGGGAAATGTATAAGAGGTAGTCTACATCGTTGGTGGACAGCGATAAACTGACCCATATCCACCCTTTAAAAAAAAATATATTGGAAAGATGGCCCACCCTTAAATAAATAAATATGTACAAGTGTTGCTAACTTGTTATATACTGTCAACGATAATATAAGTATTGTCATTGTTGTATATATACTGTAATTGTTGTATTAAAATACTGTCACAATCACCCAAAAAAAAAGAAAATTATGTATACAAGTGTAATGAAATAAAAAAAGTAAAGGGAC

mRNA sequence

ATTAAGCCATGAAATGCAACATGAGATGCATGCGTACAAACTTGTACAAACACCATTTTAATTGCTAGCCATCTATCCAACCAACCAACCAACCAACCAACCAATCCCCCACATTAAACCTAATTAATTAATCAATCAAATATAGACCCTAATTAATTTCTTGTTATAAATGTTCAACTATATAATTTGACCTCATTTGTCAACCCCTTTGTTTAACTTTTTAGGAGTGTCATCAAAATTTTGCCTTTTTTCTCTCCTCCACATAAACTATTCCATTCATTGGCCTTTTCTATCTCTTCTTTCTCTATCCAAAATTCAGAAAACTAAGAAAAATAAATAAAAAAAGAATGGAAGAATATGTGATTAACTTAATAATGGTGGGAGTAATTTCATGGACTACCCTTTTCTTGTTGACAAGAAAATTGTTTGCAAATTACTCGTTTGAGTTTTGCAACAGAATAGTGTCAACAACTCATGCTACTTTAGCTGTGATATTAGCTTCTCAAACTGTTGAAGATTGGAGTTGCCCAGTTTGTCCATTAAACTCAAGTTCTTCTCCTAAACAGATGCAAACATTAGCAGTAACAGTGGGATATTTGATATATGATCTGATATGTTCTCAATTTGACAAAAAATCCAATCTTGATAACACAATTCATCATTTGGTCAGCATTATTGGAATTGCAGCTGGTCTCTCATACCAAAAGTGTGGATCAGAGATGGTAGCAGCATTGTTCATAACAGAGATATCAAGTCCATTTCTACACCTAAGGGAGTTTCTCAAAGAAATTGGCTACAAGGACACTGATCTTAATTTGGCTGCTGATATATTGTTTGCATTAACATTTTCAGTTGCAAGAATGGTAGGAGGTCCGTATCTATTTTTTGTTACTCTATCTGCCAACAACCCACTCCTAATCAAGGCAATGGCAACAGGATTACAGCTAGTGAGTGCATTTTGGTTCTACAAAATCTTAAAAATGGTCCAGTATAAACTCACTAAACGAACCAGAGTCAAGAAGTTGGCTTGATTTTGCTTTTTAAAGTCGATCGAATTCAGAACTTGAAATATAATTTGGTAACTAATGACCCAAATTCGTCTCATATATATATATATCGGTTGCAATTTCAAGCATAAATCTAAAGTTCCAATTCGTATATTTTTAACATGATTAACAAATTGAATAGTCAAAGTACCTATTTTTTAGAAGATGATTCGTCCTCTATTCCTAAAACTTGCTATCTAAGTTAATGTGTATAATGATTATTATTTTACTAGATTTGTATTTGATATAAATTAATGAGTATGTTATATTGTTGTACCGATTACTAATTACGGAGTACTGTCGTATGTTCTCTCATTTTTTTTGCAAATTAGGCCGGTCTTACACGAGAAATCAAACGTACATGATTTGTGTCAAAAAGTTGAAACATTCTCCCTCCGTCCCTTAATACTCGCACCGATTTGACCGATGCGGAATTTAAGACATTTAAATTGACTTATTAATTTAATGGGTGATAGTTGATAGTTGGTTATTTTTTAATATAGTTAGTGGGAAATGTATAAGAGGTAGTCTACATCGTTGGTGGACAGCGATAAACTGACCCATATCCACCCTTTAAAAAAAAATATATTGGAAAGATGGCCCACCCTTAAATAAATAAATATGTACAAGTGTTGCTAACTTGTTATATACTGTCAACGATAATATAAGTATTGTCATTGTTGTATATATACTGTAATTGTTGTATTAAAATACTGTCACAATCACCCAAAAAAAAAGAAAATTATGTATACAAGTGTAATGAAATAAAAAAAGTAAAGGGAC

Coding sequence (CDS)

ATGGAAGAATATGTGATTAACTTAATAATGGTGGGAGTAATTTCATGGACTACCCTTTTCTTGTTGACAAGAAAATTGTTTGCAAATTACTCGTTTGAGTTTTGCAACAGAATAGTGTCAACAACTCATGCTACTTTAGCTGTGATATTAGCTTCTCAAACTGTTGAAGATTGGAGTTGCCCAGTTTGTCCATTAAACTCAAGTTCTTCTCCTAAACAGATGCAAACATTAGCAGTAACAGTGGGATATTTGATATATGATCTGATATGTTCTCAATTTGACAAAAAATCCAATCTTGATAACACAATTCATCATTTGGTCAGCATTATTGGAATTGCAGCTGGTCTCTCATACCAAAAGTGTGGATCAGAGATGGTAGCAGCATTGTTCATAACAGAGATATCAAGTCCATTTCTACACCTAAGGGAGTTTCTCAAAGAAATTGGCTACAAGGACACTGATCTTAATTTGGCTGCTGATATATTGTTTGCATTAACATTTTCAGTTGCAAGAATGGTAGGAGGTCCGTATCTATTTTTTGTTACTCTATCTGCCAACAACCCACTCCTAATCAAGGCAATGGCAACAGGATTACAGCTAGTGAGTGCATTTTGGTTCTACAAAATCTTAAAAATGGTCCAGTATAAACTCACTAAACGAACCAGAGTCAAGAAGTTGGCTTGA

Protein sequence

MEEYVINLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSCPVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFFVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTRVKKLA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo01938.1	Spo01938.1	mRNA

Homology

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BLAST of Spo01938.1 vs. NCBI nr
Match: gi|731312164|ref|XP_010672861.1| (PREDICTED: transmembrane protein 136-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 381.3 bits (978), Expect = 1.200e-102
Identity = 193/229 (84.28%), Postives = 211/229 (92.14%), Query Frame = 1

		  
Query: 1   MEEYVINLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSC 60
           ME+YV+++IMVGVISWTTLF+LTRKL  NYSFEFCNR+VSTTHAT+AVILAS TV+DWSC
Sbjct: 1   MEDYVMSIIMVGVISWTTLFMLTRKLLQNYSFEFCNRLVSTTHATIAVILASLTVQDWSC 60

Query: 61  PVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDK--KSNLDNTIHHLVSIIGIAAGLSY 120
           P+ PLNS SSPKQMQTLAVTV YLIYD+ICSQFDK  KSN+DNTIHHLVSI+GI AGL Y
Sbjct: 61  PLSPLNSDSSPKQMQTLAVTVAYLIYDMICSQFDKRSKSNVDNTIHHLVSIVGIGAGLFY 120

Query: 121 QKCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYL 180
           QKCG+EMV ALFITEISSPFLHLREFLKE+GYKDTD+NLAADILFA+ FS+ARMV GPYL
Sbjct: 121 QKCGTEMVTALFITEISSPFLHLREFLKELGYKDTDVNLAADILFAVIFSIARMVIGPYL 180

Query: 181 FFVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTRVKKLA 228
            +VTLSANNPLLIKAMA GLQLVSAFWFYKIL MVQYK TKRT VKKLA
Sbjct: 181 SYVTLSANNPLLIKAMAIGLQLVSAFWFYKILIMVQYKFTKRTTVKKLA 229

[Close]

BLAST of Spo01938.1 vs. NCBI nr
Match: gi|902196680|gb|KNA13172.1| (hypothetical protein SOVF_118930, partial [Spinacia oleracea])

HSP 1 Score: 370.9 bits (951), Expect = 1.600e-99
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1

		  
Query: 38  IVSTTHATLAVILASQTVEDWSCPVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKS 97
           IVSTTHATLAVILASQTVEDWSCPVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKS
Sbjct: 1   IVSTTHATLAVILASQTVEDWSCPVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKS 60

Query: 98  NLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNL 157
           NLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNL
Sbjct: 61  NLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNL 120

Query: 158 AADILFALTFSVARMVGGPYLFFVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKL 217
           AADILFALTFSVARMVGGPYLFFVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKL
Sbjct: 121 AADILFALTFSVARMVGGPYLFFVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKL 180

Query: 218 TKRTRVKKLA 228
           TKRTRVKKLA
Sbjct: 181 TKRTRVKKLA 190

[Close]

BLAST of Spo01938.1 vs. NCBI nr
Match: gi|823224143|ref|XP_012444836.1| (PREDICTED: transmembrane protein 136 [Gossypium raimondii])

HSP 1 Score: 345.5 bits (885), Expect = 7.000e-92
Identity = 173/222 (77.93%), Postives = 195/222 (87.84%), Query Frame = 1

		  
Query: 2   EEY-VINLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSC 61
           EEY ++NLI +GVISWTT+FLL RK+F++ SFE CNRIVST H  LAVILAS +VEDWSC
Sbjct: 3   EEYDIVNLIALGVISWTTVFLLVRKIFSDRSFELCNRIVSTIHGILAVILASLSVEDWSC 62

Query: 62  PVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQK 121
           PVCPL S+S+PKQ Q LAVTV YLIYDLIC  FD K  LDNT+HHLVSI+G+AAGL++Q 
Sbjct: 63  PVCPLASASTPKQRQVLAVTVAYLIYDLICCLFDVKFTLDNTVHHLVSIVGLAAGLAFQL 122

Query: 122 CGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFF 181
           CGSE VAALFITEISSPFLH RE LKE GY+DTDLNLAAD+LFA+ FSVARMVGGPYL F
Sbjct: 123 CGSEQVAALFITEISSPFLHARELLKEFGYRDTDLNLAADVLFAVIFSVARMVGGPYLTF 182

Query: 182 VTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTR 223
           VTL+ANNPLLIKAMA GLQLVSAFWFYKI+KMV+YKLTKR +
Sbjct: 183 VTLTANNPLLIKAMAVGLQLVSAFWFYKIVKMVKYKLTKRRK 224

[Close]

BLAST of Spo01938.1 vs. NCBI nr
Match: gi|802595020|ref|XP_012071929.1| (PREDICTED: transmembrane protein 136 [Jatropha curcas])

HSP 1 Score: 344.0 bits (881), Expect = 2.000e-91
Identity = 168/226 (74.34%), Postives = 198/226 (87.61%), Query Frame = 1

		  
Query: 1   MEEYVINLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSC 60
           ME+YV+N+I++GVISWTT FLL RKL  N SFEFCNR+VST HATL V LAS +V+DW C
Sbjct: 1   MEDYVLNIIILGVISWTTAFLLIRKLLPNRSFEFCNRLVSTIHATLGVTLASLSVQDWRC 60

Query: 61  PVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQK 120
           PVCPL S SSP+QM+TLA++V YLIYD+IC  FDKK NLDNTIHHLVSI+G+ AGL+YQK
Sbjct: 61  PVCPLASESSPRQMRTLAISVSYLIYDMICCFFDKKFNLDNTIHHLVSIVGLVAGLAYQK 120

Query: 121 CGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFF 180
           CGSEMVAAL+ITEISSPFLHLRE LKE+GY+DTD NLAADILFA+ FS+ARMVGGPYL +
Sbjct: 121 CGSEMVAALWITEISSPFLHLREGLKELGYRDTDFNLAADILFAVVFSLARMVGGPYLTY 180

Query: 181 VTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTRVKKL 227
           VTL+A NP++IKAMA GLQLVSAFWFYKI++MV+YKL K+   K +
Sbjct: 181 VTLTAKNPIIIKAMALGLQLVSAFWFYKIVRMVKYKLAKKPISKNM 226

[Close]

BLAST of Spo01938.1 vs. NCBI nr
Match: gi|728847562|gb|KHG27005.1| (Transmembrane protein [Gossypium arboreum])

HSP 1 Score: 342.8 bits (878), Expect = 4.500e-91
Identity = 170/222 (76.58%), Postives = 195/222 (87.84%), Query Frame = 1

		  
Query: 2   EEY-VINLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSC 61
           EEY ++NLI++GVISWTT+FLL RK+F++ SFE CNRIVST H  LAVILAS +VEDWSC
Sbjct: 3   EEYDIVNLIVLGVISWTTVFLLVRKIFSDRSFELCNRIVSTIHGILAVILASLSVEDWSC 62

Query: 62  PVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQK 121
           PVCPL S+S+PKQ Q LAVTV YLIYDLIC  FD K  LDNT+HHLVSI+G+AAGL++Q 
Sbjct: 63  PVCPLASASTPKQRQVLAVTVAYLIYDLICCLFDVKFTLDNTVHHLVSIVGLAAGLAFQL 122

Query: 122 CGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFF 181
           CGSE VAA+FITEISSPFLH RE LKE GY+DTDLNLAAD+LFA+ FSVARMVGGPY+ F
Sbjct: 123 CGSEQVAAIFITEISSPFLHARELLKEFGYRDTDLNLAADVLFAVIFSVARMVGGPYVTF 182

Query: 182 VTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTR 223
           VTL+ANNPLLIKAMA GLQLVS FWFYKI+KMV+YKLTKR +
Sbjct: 183 VTLTANNPLLIKAMAVGLQLVSTFWFYKIVKMVKYKLTKRRK 224

[Close]

BLAST of Spo01938.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FYL0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g006860 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 8.000e-103
Identity = 193/229 (84.28%), Postives = 211/229 (92.14%), Query Frame = 1

		  
Query: 1   MEEYVINLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSC 60
           ME+YV+++IMVGVISWTTLF+LTRKL  NYSFEFCNR+VSTTHAT+AVILAS TV+DWSC
Sbjct: 1   MEDYVMSIIMVGVISWTTLFMLTRKLLQNYSFEFCNRLVSTTHATIAVILASLTVQDWSC 60

Query: 61  PVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDK--KSNLDNTIHHLVSIIGIAAGLSY 120
           P+ PLNS SSPKQMQTLAVTV YLIYD+ICSQFDK  KSN+DNTIHHLVSI+GI AGL Y
Sbjct: 61  PLSPLNSDSSPKQMQTLAVTVAYLIYDMICSQFDKRSKSNVDNTIHHLVSIVGIGAGLFY 120

Query: 121 QKCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYL 180
           QKCG+EMV ALFITEISSPFLHLREFLKE+GYKDTD+NLAADILFA+ FS+ARMV GPYL
Sbjct: 121 QKCGTEMVTALFITEISSPFLHLREFLKELGYKDTDVNLAADILFAVIFSIARMVIGPYL 180

Query: 181 FFVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTRVKKLA 228
            +VTLSANNPLLIKAMA GLQLVSAFWFYKIL MVQYK TKRT VKKLA
Sbjct: 181 SYVTLSANNPLLIKAMAIGLQLVSAFWFYKILIMVQYKFTKRTTVKKLA 229

[Close]

BLAST of Spo01938.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R303_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_118930 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.100e-99
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1

		  
Query: 38  IVSTTHATLAVILASQTVEDWSCPVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKS 97
           IVSTTHATLAVILASQTVEDWSCPVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKS
Sbjct: 1   IVSTTHATLAVILASQTVEDWSCPVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKS 60

Query: 98  NLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNL 157
           NLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNL
Sbjct: 61  NLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNL 120

Query: 158 AADILFALTFSVARMVGGPYLFFVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKL 217
           AADILFALTFSVARMVGGPYLFFVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKL
Sbjct: 121 AADILFALTFSVARMVGGPYLFFVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKL 180

Query: 218 TKRTRVKKLA 228
           TKRTRVKKLA
Sbjct: 181 TKRTRVKKLA 190

[Close]

BLAST of Spo01938.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S4P2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G199000 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.900e-92
Identity = 173/222 (77.93%), Postives = 195/222 (87.84%), Query Frame = 1

		  
Query: 2   EEY-VINLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSC 61
           EEY ++NLI +GVISWTT+FLL RK+F++ SFE CNRIVST H  LAVILAS +VEDWSC
Sbjct: 3   EEYDIVNLIALGVISWTTVFLLVRKIFSDRSFELCNRIVSTIHGILAVILASLSVEDWSC 62

Query: 62  PVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQK 121
           PVCPL S+S+PKQ Q LAVTV YLIYDLIC  FD K  LDNT+HHLVSI+G+AAGL++Q 
Sbjct: 63  PVCPLASASTPKQRQVLAVTVAYLIYDLICCLFDVKFTLDNTVHHLVSIVGLAAGLAFQL 122

Query: 122 CGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFF 181
           CGSE VAALFITEISSPFLH RE LKE GY+DTDLNLAAD+LFA+ FSVARMVGGPYL F
Sbjct: 123 CGSEQVAALFITEISSPFLHARELLKEFGYRDTDLNLAADVLFAVIFSVARMVGGPYLTF 182

Query: 182 VTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTR 223
           VTL+ANNPLLIKAMA GLQLVSAFWFYKI+KMV+YKLTKR +
Sbjct: 183 VTLTANNPLLIKAMAVGLQLVSAFWFYKIVKMVKYKLTKRRK 224

[Close]

BLAST of Spo01938.1 vs. UniProtKB/TrEMBL
Match: A0A067KQQ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04481 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.400e-91
Identity = 168/226 (74.34%), Postives = 198/226 (87.61%), Query Frame = 1

		  
Query: 1   MEEYVINLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSC 60
           ME+YV+N+I++GVISWTT FLL RKL  N SFEFCNR+VST HATL V LAS +V+DW C
Sbjct: 1   MEDYVLNIIILGVISWTTAFLLIRKLLPNRSFEFCNRLVSTIHATLGVTLASLSVQDWRC 60

Query: 61  PVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQK 120
           PVCPL S SSP+QM+TLA++V YLIYD+IC  FDKK NLDNTIHHLVSI+G+ AGL+YQK
Sbjct: 61  PVCPLASESSPRQMRTLAISVSYLIYDMICCFFDKKFNLDNTIHHLVSIVGLVAGLAYQK 120

Query: 121 CGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFF 180
           CGSEMVAAL+ITEISSPFLHLRE LKE+GY+DTD NLAADILFA+ FS+ARMVGGPYL +
Sbjct: 121 CGSEMVAALWITEISSPFLHLREGLKELGYRDTDFNLAADILFAVVFSLARMVGGPYLTY 180

Query: 181 VTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTRVKKL 227
           VTL+A NP++IKAMA GLQLVSAFWFYKI++MV+YKL K+   K +
Sbjct: 181 VTLTAKNPIIIKAMALGLQLVSAFWFYKIVRMVKYKLAKKPISKNM 226

[Close]

BLAST of Spo01938.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PPR9_GOSAR (Transmembrane protein OS=Gossypium arboreum GN=F383_09062 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.200e-91
Identity = 170/222 (76.58%), Postives = 195/222 (87.84%), Query Frame = 1

		  
Query: 2   EEY-VINLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSC 61
           EEY ++NLI++GVISWTT+FLL RK+F++ SFE CNRIVST H  LAVILAS +VEDWSC
Sbjct: 3   EEYDIVNLIVLGVISWTTVFLLVRKIFSDRSFELCNRIVSTIHGILAVILASLSVEDWSC 62

Query: 62  PVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQK 121
           PVCPL S+S+PKQ Q LAVTV YLIYDLIC  FD K  LDNT+HHLVSI+G+AAGL++Q 
Sbjct: 63  PVCPLASASTPKQRQVLAVTVAYLIYDLICCLFDVKFTLDNTVHHLVSIVGLAAGLAFQL 122

Query: 122 CGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFF 181
           CGSE VAA+FITEISSPFLH RE LKE GY+DTDLNLAAD+LFA+ FSVARMVGGPY+ F
Sbjct: 123 CGSEQVAAIFITEISSPFLHARELLKEFGYRDTDLNLAADVLFAVIFSVARMVGGPYVTF 182

Query: 182 VTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTR 223
           VTL+ANNPLLIKAMA GLQLVS FWFYKI+KMV+YKLTKR +
Sbjct: 183 VTLTANNPLLIKAMAVGLQLVSTFWFYKIVKMVKYKLTKRRK 224

[Close]

BLAST of Spo01938.1 vs. ExPASy Swiss-Prot
Match: TM136_HUMAN (Transmembrane protein 136 OS=Homo sapiens GN=TMEM136 PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-15
Identity = 63/215 (29.30%), Postives = 107/215 (49.77%), Query Frame = 1

		  
Query: 9   IMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQT-VEDWSCPVCPLNS 68
           ++  +  W +L++    L  + S+E+  R+V+ TH  L++ L++     D   P     S
Sbjct: 9   VLCSLCGWLSLYISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGS 68

Query: 69  SSSPKQMQTLAVTVGYLIYDL-ICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQKCGSEMV 128
            ++P Q+  L +T+GY I+DL  C  F  +  L    HH +SI+GI   L   + G+E+ 
Sbjct: 69  PNTPLQVHVLCLTLGYFIFDLGWCVYFQSEGAL-MLAHHTLSILGIIMALVLGESGTEVN 128

Query: 129 AALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARM-VGGPYLFFVTLSA 188
           A LF +E+++P L +R FL+E G+  +      D LF   F+  R+ VG   LF   +S 
Sbjct: 129 AVLFGSELTNPLLQMRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSP 188

Query: 189 NNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKR 221
                +KA    +  VS  + + I +    K  K+
Sbjct: 189 TPKWFVKAGGVAMYAVSWCFMFSIWRFAWRKSIKK 222

[Close]

BLAST of Spo01938.1 vs. ExPASy Swiss-Prot
Match: TM136_BOVIN (Transmembrane protein 136 OS=Bos taurus GN=TMEM136 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.100e-15
Identity = 63/208 (30.29%), Postives = 105/208 (50.48%), Query Frame = 1

		  
Query: 16  WTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQT-VEDWSCPVCPLNSSSSPKQM 75
           W +L++   +L  + S+E+  R+V+ TH  L++ L++     D   P     S ++P Q+
Sbjct: 16  WLSLYVSFCRLNKHRSYEWNCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQV 75

Query: 76  QTLAVTVGYLIYDL-ICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITE 135
             L +T+GY I+DL  C  F  +  L    HH +SI+GI   L   + G+E+ A LF +E
Sbjct: 76  HVLCLTLGYFIFDLGWCIYFRSEGPL-MLAHHTLSILGIIVALVLGESGTEVNAVLFGSE 135

Query: 136 ISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARM-VGGPYLFFVTLSANNPLLIK 195
           I++P L +R FL+E G+  +      D LF   F+  R+ VG   LF   +S      +K
Sbjct: 136 ITNPLLQIRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPTPKWFVK 195

Query: 196 AMATGLQLVSAFWFYKILKMVQYKLTKR 221
                + +VS  + + I +    K  K+
Sbjct: 196 VGGVAMYVVSWCFMFSIWRFAWRKSIKK 222

[Close]

BLAST of Spo01938.1 vs. ExPASy Swiss-Prot
Match: TM136_MOUSE (Transmembrane protein 136 OS=Mus musculus GN=Tmem136 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.500e-14
Identity = 62/215 (28.84%), Postives = 105/215 (48.84%), Query Frame = 1

		  
Query: 9   IMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQT-VEDWSCPVCPLNS 68
           ++  +  W +L+     L  + S E+  R+V+ TH  L++ L++     D   P     S
Sbjct: 9   VLCSLGGWLSLYTSFCCLNKHRSCEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGS 68

Query: 69  SSSPKQMQTLAVTVGYLIYDL-ICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQKCGSEMV 128
            ++P Q+  L +T+GY I+DL  C  F  +  L    HH +SI+GI   L+  + G+E+ 
Sbjct: 69  PNTPLQVHVLCLTLGYFIFDLGWCIYFQSEGPL-MLAHHTLSILGIIMALALGESGTEVN 128

Query: 129 AALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFFVTLSAN 188
           A LF +EI++P L +R FL+E G+  +      D LF   F+  R+  G +L F  + + 
Sbjct: 129 AVLFGSEITNPLLQMRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGAHLLFCEMVSP 188

Query: 189 NP-LLIKAMATGLQLVSAFWFYKILKMVQYKLTKR 221
            P   +K     +  VS  +   I +    K  K+
Sbjct: 189 TPKWFVKVGGVAMYAVSWCFMVSIWRFAWKKSIKK 222

[Close]

BLAST of Spo01938.1 vs. ExPASy Swiss-Prot
Match: TM136_DANRE (Transmembrane protein 136 OS=Danio rerio GN=tmem136 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.700e-14
Identity = 56/200 (28.00%), Postives = 96/200 (48.00%), Query Frame = 1

		  
Query: 13  VISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQT---VEDWSCPVCPLNSSS 72
           +ISW  L+LL   L +    E+  R+V+  H  L + L +        W  P     + +
Sbjct: 12  LISWLFLYLLLCHLNSGRDSEWNCRLVTLFHGILIICLTAYIGFIAGPW--PFTHPGTEN 71

Query: 73  SPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQKCGSEMVAAL 132
           +  Q+ TL +++GY ++D+    + +        HH +SI GI   L   + G E  A L
Sbjct: 72  TYFQILTLVLSLGYFLFDMAWCVYFRTEGPVMLAHHTMSIFGILLALGLGESGIETCAVL 131

Query: 133 FITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFFVTLSANNPL 192
           F +EI++P L  R FLK +G  D+      D+LF L F+  R+  G  + +  L++  P 
Sbjct: 132 FGSEITNPLLQARWFLKRMGCYDSLAGDVVDLLFILLFASVRIGVGSRMLYCELTSPKPS 191

Query: 193 LIKAMATGLQLVSAFWFYKI 210
           LI  +  G+ + +  W + +
Sbjct: 192 LIVKVG-GVAIYTLSWIFMV 208

[Close]

BLAST of Spo01938.1 vs. ExPASy Swiss-Prot
Match: YL438_MIMIV (Putative TLC domain-containing protein L438 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L438 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.400e-6
Identity = 38/148 (25.68%), Postives = 80/148 (54.05%), Query Frame = 1

		  
Query: 77  LAVTVGYLIYD--LICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITEI 136
           L +T+ Y + D  L+  +++ K N+   +HH + I+ I           + + A    E+
Sbjct: 47  LMLTLVYFLSDYYLMIVKYNPKHNV-YFVHHFIGIVSIYFSYMKYYYLIKYLFAYLTFEL 106

Query: 137 SSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFFVTLSANNPL----- 196
           S+PFL++    +  G  +   ++ +++ F + F+V R++ G YL+FVT +  + +     
Sbjct: 107 STPFLNIAIKYRNQGVYNK-CSIFSELAFFILFTVVRIIFGTYLWFVTSNTLSSIEYPYN 166

Query: 197 LIKAMATGLQLVSAFWFYKILKMVQYKL 218
            +  + T LQ ++ +W+Y+ILK+++ KL
Sbjct: 167 YLIVLPTILQFLNYWWYYRILKILRAKL 192

[Close]

BLAST of Spo01938.1 vs. TAIR (Arabidopsis)
Match: AT1G35180.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 312.8 bits (800), Expect = 1.800e-85
Identity = 152/226 (67.26%), Postives = 190/226 (84.07%), Query Frame = 1

		  
Query: 2   EEYV--INLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWS 61
           EEYV  I++  +GVISW  +F+L R++F++YSF+F  RIVST HAT+AV LA+ +++DWS
Sbjct: 3   EEYVRVISITTIGVISWGLIFILVRRIFSSYSFDFSTRIVSTLHATIAVTLATLSIQDWS 62

Query: 62  CPVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQ 121
           CPVCP+ S+SS +QM+TLA ++ Y+IYDLICS FD+  ++DN +HH V I+G  AGL YQ
Sbjct: 63  CPVCPIASTSSLRQMETLAFSLSYMIYDLICSHFDQVLSIDNAVHHSVCILGFVAGLFYQ 122

Query: 122 KCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLF 181
           KCGSEMVAAL+ITEISSPFLHLRE LKEIGY+DTDLNLAAD+ FA  FS+ARMVGGPYL 
Sbjct: 123 KCGSEMVAALWITEISSPFLHLREILKEIGYRDTDLNLAADVCFATIFSLARMVGGPYLV 182

Query: 182 FVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTRVKK 226
           +VT+SA+NP+LIKAMA GLQLVSAFWFYKILKM++YK  KR+   K
Sbjct: 183 YVTISADNPILIKAMALGLQLVSAFWFYKILKMMRYKFIKRSMSNK 228

[Close]

BLAST of Spo01938.1 vs. TAIR (Arabidopsis)
Match: AT1G35170.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 288.5 bits (737), Expect = 3.600e-78
Identity = 142/226 (62.83%), Postives = 183/226 (80.97%), Query Frame = 1

		  
Query: 2   EEYV--INLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWS 61
           EEY+  I++  + +ISW  +F+L R++F++YSF+F  RIVST HAT+AV LA+ +++DWS
Sbjct: 3   EEYIRIISITTIRIISWGLIFILVRRIFSSYSFDFSTRIVSTLHATIAVTLATLSIQDWS 62

Query: 62  CPVCPLNSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQ 121
           CPVCP+ S+SS +QM+TLA ++ Y+IYDLICS FD+  ++DN +HH V I+G  AGL YQ
Sbjct: 63  CPVCPIASTSSLRQMETLAFSLSYMIYDLICSHFDQVLSIDNAVHHSVCILGFVAGLFYQ 122

Query: 122 KCGSEMVAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLF 181
           KCGSEMVAA++ITEISSPFLHLRE LKEIG +DTDLNLAAD+ FA  FSVARMVGGPYL 
Sbjct: 123 KCGSEMVAAIWITEISSPFLHLREILKEIGCRDTDLNLAADVFFATIFSVARMVGGPYLV 182

Query: 182 FVTLSANNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTRVKK 226
           +VT+ A+NP+LIK M  GLQLVSA  FYK+LKM++YK  KR+   K
Sbjct: 183 YVTIPADNPILIKVMGLGLQLVSA--FYKLLKMMRYKFIKRSMSTK 226

[Close]

BLAST of Spo01938.1 vs. TAIR (Arabidopsis)
Match: AT1G45010.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 275.8 bits (704), Expect = 2.400e-74
Identity = 133/220 (60.45%), Postives = 173/220 (78.64%), Query Frame = 1

		  
Query: 6   INLIMVGVISWTTLFLLTRKLFANYSFEFCNRIVSTTHATLAVILASQTVEDWSCPVCPL 65
           I +I+ GVISW   F+LTR++F++YSF F NR++ST HAT+AV LA+ +V+D SCPVCPL
Sbjct: 9   IKIIVFGVISWGVAFILTRRIFSSYSFSFSNRLLSTAHATIAVTLATLSVQDLSCPVCPL 68

Query: 66  NSSSSPKQMQTLAVTVGYLIYDLICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQKCGSEM 125
            S  S KQM  +A ++ Y+IYDLIC  FD+  ++DN +HH VSI+G  AGL+YQK GSE+
Sbjct: 69  ASKPSHKQMDVMAFSLSYMIYDLICCHFDQVFSIDNAVHHFVSILGFIAGLAYQKSGSEI 128

Query: 126 VAALFITEISSPFLHLREFLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFFVTLSA 185
           VA L++ EISSPF HLRE LKEIGYKDT LNLAAD+ FA  F++AR+V GP+L +V+LSA
Sbjct: 129 VATLWVAEISSPFFHLREILKEIGYKDTKLNLAADVCFATIFTLARIVCGPFLVYVSLSA 188

Query: 186 NNPLLIKAMATGLQLVSAFWFYKILKMVQYKLTKRTRVKK 226
           +NP+ IKAM +GLQLVS FWFYKI  M++YKL K+ +  K
Sbjct: 189 DNPIFIKAMGSGLQLVSIFWFYKIFGMMRYKLFKKPKSNK 228

[Close]

BLAST of Spo01938.1 vs. TAIR (Arabidopsis)
Match: AT1G31300.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.600e-7
Identity = 53/206 (25.73%), Postives = 95/206 (46.12%), Query Frame = 1

		  
Query: 33  EFCNRIVSTTHA------TLAVILASQTVED-WSCPVCPLNSSSSPKQMQTLAVTVGYLI 92
           E+ NR +ST HA      +L  +  S    D W   +    SS        L +++GY +
Sbjct: 73  EWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSL--GLGISIGYFL 132

Query: 93  YDL--ICSQFDKKSNLDNTIHHLVSIIGIAAGLSYQKCGSEMVAALFITEISSPFLHLRE 152
            DL  I  ++     ++  +HH +S + +A  L +   G      + I+EI++P ++LR 
Sbjct: 133 ADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSL-FSGEGQLYTYMVLISEITTPEINLRW 192

Query: 153 FLKEIGYKDTDLNLAADILFALTFSVARMVGGPYLFF-VTLSANNPL--------LIKAM 212
           +L   G K +   +   +   L + VAR++   Y+F+ V L  N  +        L+  +
Sbjct: 193 YLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYVLVFGV 252

Query: 213 ATGLQLVSAFWFYKILKMVQYKLTKR 221
              L +++  WF KI++ V+  L KR
Sbjct: 253 PAALGVMNLIWFGKIVRGVKKTLAKR 275

The following BLAST results are available for this feature:

BLAST of Spo01938.1 vs. NCBI nr
BLAST of Spo01938.1 vs. UniProtKB/TrEMBL
BLAST of Spo01938.1 vs. ExPASy Swiss-Prot
BLAST of Spo01938.1 vs. TAIR (Arabidopsis)

BLAST of Spo01938.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|731312164\|ref\|XP_010672861.1\|	1.2e-102	84.2	PREDICTED: transmembrane prote...	[more]
gi\|902196680\|gb\|KNA13172.1\|	1.6e-99	100.	hypothetical protein SOVF_1189...	[more]
gi\|823224143\|ref\|XP_012444836.1\|	7.0e-92	77.9	PREDICTED: transmembrane prote...	[more]
gi\|802595020\|ref\|XP_012071929.1\|	2.0e-91	74.3	PREDICTED: transmembrane prote...	[more]
gi\|728847562\|gb\|KHG27005.1\|	4.5e-91	76.5	Transmembrane protein [Gossypi...	[more]

BLAST of Spo01938.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0J8FYL0_BETVU	8.0e-103	84.2	Uncharacterized protein OS=Bet...	[more]
A0A0K9R303_SPIOL	1.1e-99	100.	Uncharacterized protein (Fragm...	[more]
A0A0D2S4P2_GOSRA	4.9e-92	77.9	Uncharacterized protein OS=Gos...	[more]
A0A067KQQ8_JATCU	1.4e-91	74.3	Uncharacterized protein OS=Jat...	[more]
A0A0B0PPR9_GOSAR	3.2e-91	76.5	Transmembrane protein OS=Gossy...	[more]

BLAST of Spo01938.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
TM136_HUMAN	1.4e-15	29.3	Transmembrane protein 136 OS=H...	[more]
TM136_BOVIN	4.1e-15	30.2	Transmembrane protein 136 OS=B...	[more]
TM136_MOUSE	4.5e-14	28.8	Transmembrane protein 136 OS=M...	[more]
TM136_DANRE	7.7e-14	28.0	Transmembrane protein 136 OS=D...	[more]
YL438_MIMIV	3.4e-6	25.6	Putative TLC domain-containing...	[more]

BLAST of Spo01938.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G35180.1	1.8e-85	67.2	TRAM, LAG1 and CLN8 (TLC) lipi...	[more]
AT1G35170.1	3.6e-78	62.8	TRAM, LAG1 and CLN8 (TLC) lipi...	[more]
AT1G45010.1	2.4e-74	60.4	TRAM, LAG1 and CLN8 (TLC) lipi...	[more]
AT1G31300.1	5.6e-7	25.7	TRAM, LAG1 and CLN8 (TLC) lipi...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 33..211 score: 7.8
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 29..218 score: 1.0
IPR006634	TRAM/LAG1/CLN8 homology domain	PROFILE	PS50922	TLC	coord: 29..218 score: 36
None	No IPR available	PANTHER	PTHR31898	FAMILY NOT NAMED	coord: 1..225 score: 2.4E
None	No IPR available	PANTHER	PTHR31898:SF1	TRANSMEMBRANE PROTEIN 136	coord: 1..225 score: 2.4E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo02918	0.71	Barchart \| Table
Spo01983	0.70	Barchart \| Table
Spo16643	0.70	Barchart \| Table
Spo17320	0.68	Barchart \| Table
Spo03523	0.68	Barchart \| Table
Spo05032	0.68	Barchart \| Table
Spo13788	0.67	Barchart \| Table
Spo14914	0.66	Barchart \| Table