Spo01942 (gene)

Overview
NameSpo01942
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSmall heat shock protein
LocationSpoScf_02959 : 12842 .. 15128 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACCAAGTTTTACTAAATAACGTACACAAACTCGATACTCGATTACTCGTGTATCTTTTTGCTAGGAGAAGCCACGTTACTTTGCTTGATTAGAAACAAAGAGCATCAACATTAGAAATGAGGCTTCTCATAGCAAAAAGAAAAGACACACACACAGACACACTTACAAAGTTACAAGACAAGAACTCAACAAGTTATCATACATTACTATAAATAAGCTCCCAATGAATGAATAAAAATACAACTAAAACTTTCCACTCTTATTTTATTACTCAAAAATTGTTTTTAATTCTTAGTAATTTCTAGTGTTCTACTAATCTTGTTCAATGGCAAGCAAATTGCTGACATGTTCTGCTGCTTCAACTCTGGTATCGAACAGGGCCTCATCCTACCCATTACCAATCGGGCTGGGCCTAGGTTCTGGGCTGCCACCAAAACCGTCAATTAGGAGGACCCCTTCTTCAAGGCCCTCTTTGGTGGTGAAAGCCCAACAGGGAATTGAGCCAATGTCAGGTGAAAAGTTCCACCAAAAGGTTGCACTACTTAACACCTCTCCTTATGGTAAATATTCCACCCCTTCAACTGCTTTGCTATCTTACATAGGTGAGGAGGATTCCTTCTCTCCTTAATACATTACTCGTCCGTCCTTAAAAACAAAAGGTTGGTTTTCTGATTACAAAAGGTCTTACACACATAAGATGTACAATAAATTAATTGTGCACCAGAATAACTTTTACCTATTTTTTTTTTACAACAACAACAACAACAAAGTCTTAGTCCCAAAATGTTAGTTTTTTTTGTAGTTTTTAATATATTTTGATTAATTTTTATATTATAAGAATTTTGATAGATAAACATTTTAAAATGTTAAATGATAATTTTATACACTATTAGTGATTTTAAAGAAATAATTTTAATTAAAATTAAAAAAAATTATCACTAAAAAATAGAAAACTTTTACATACTATACGTAGTATATATAAGAGTAACTTTTAAATATTTTAAGTCAATTATTGTTCTGATATACAGTATTTATTGTACACTACATGTAAATAAAAATTTGTGTTCATGTTAACCGCTTTTTAAAATATTGTAACCCTTACCGACAGATTGTCATTTTACTTGTTTATTGAGGATACATTAGCTAGGTTTGTATGAAGGCAAGTTCTATTTGGTTTGACAAAGAAAAGTTCCGGTTCATCAAGTTTATATATTTGGCTACCATTAAAATTATTATTTAATTTTATCCTACAACTACTAACTAGTATTCCCTCCGTTTCAAGTTTTTCTGTTTTAGTTCGTTTCATAATGTTATTTATACTTTGTTTTAATCCATTTTTGGACATGAAAATTTACTACCTTACCGTTTTTACCTCATCATATTTATATATTTCCAGTCACTTTTCTTACTTTATTCATTTTTTTCTTATGCCCACTCACCTGTTTCCACATTTCTCTCGCTTTATACATATTTTATTATATTCAACTAAATTTTCTACTTTTGTCTTAATATTTGTGCAAATAGTAACGGTATAGATTTTTATAAAACAGAAGTAGTAGTAAACTACCCTAAACAATGTAAACTACATCCTAGCTAGATTGTACCATACCTCCATAGGATCGACATTCAATAACGTCGTAAATTAGCTTATCGTAACATAAACGGTAATAATTGGTATCTTAATTTTGCAGTGCGAACTCCCTGGAATACTTCAGAGGACGAGCACGAGATCAGGATGTGGTTCGACATGCCAGGACTCGCAGCTGAGAACTTAGAAGTTGAAACTGTGGATGATTTGCTTGTCATTAGAGGTGACGGTGGCGTCGACGCGTTCGGAAACAAGATCTTGAGTCCATATGATAGCAGGGTTCAGCTTCCAAACAACTCATGGAAGGAAGAAATTACTGCTGTGTTCAAGAATGGTGTGCTCTACATTACTGTCCCTAAGATTACCAAGTTTGAGCACAAGATTATCCATGTTCCTGTTAGAGCCATTCAGTAATCATCATAATTTATTGCTCGTGAAATTAATTAATTAATTTAATTAATTAATTAATTAAGTAATTTATTAATTGGTCTTCTAAACTTTATGGGAGACGTATGGAATGTTTTATTAAGATCTTAATTTGCTTTGAATTAATGTACGTGTAAAAGAGAAGCTCAAAGTGCTCAACTCTAAGTTGTACGGCTCACTTGCTTGATGTGGCTACGTACCTATTATAATAATAAGACAATTGATCGCTGCGATCGATATATTCTGGTAATGGCATGTTCATAAAATTTTCA

mRNA sequence

GACCAAGTTTTACTAAATAACGTACACAAACTCGATACTCGATTACTCGTGTATCTTTTTGCTAGGAGAAGCCACGTTACTTTGCTTGATTAGAAACAAAGAGCATCAACATTAGAAATGAGGCTTCTCATAGCAAAAAGAAAAGACACACACACAGACACACTTACAAAGTTACAAGACAAGAACTCAACAAGTTATCATACATTACTATAAATAAGCTCCCAATGAATGAATAAAAATACAACTAAAACTTTCCACTCTTATTTTATTACTCAAAAATTGTTTTTAATTCTTAGTAATTTCTAGTGTTCTACTAATCTTGTTCAATGGCAAGCAAATTGCTGACATGTTCTGCTGCTTCAACTCTGGTATCGAACAGGGCCTCATCCTACCCATTACCAATCGGGCTGGGCCTAGGTTCTGGGCTGCCACCAAAACCGTCAATTAGGAGGACCCCTTCTTCAAGGCCCTCTTTGGTGGTGAAAGCCCAACAGGGAATTGAGCCAATGTCAGGTGAAAAGTTCCACCAAAAGGTTGCACTACTTAACACCTCTCCTTATGTGCGAACTCCCTGGAATACTTCAGAGGACGAGCACGAGATCAGGATGTGGTTCGACATGCCAGGACTCGCAGCTGAGAACTTAGAAGTTGAAACTGTGGATGATTTGCTTGTCATTAGAGGTGACGGTGGCGTCGACGCGTTCGGAAACAAGATCTTGAGTCCATATGATAGCAGGGTTCAGCTTCCAAACAACTCATGGAAGGAAGAAATTACTGCTGTGTTCAAGAATGGTGTGCTCTACATTACTGTCCCTAAGATTACCAAGTTTGAGCACAAGATTATCCATGTTCCTGTTAGAGCCATTCAGTAATCATCATAATTTATTGCTCGTGAAATTAATTAATTAATTTAATTAATTAATTAATTAAGTAATTTATTAATTGGTCTTCTAAACTTTATGGGAGACGTATGGAATGTTTTATTAAGATCTTAATTTGCTTTGAATTAATGTACGTGTAAAAGAGAAGCTCAAAGTGCTCAACTCTAAGTTGTACGGCTCACTTGCTTGATGTGGCTACGTACCTATTATAATAATAAGACAATTGATCGCTGCGATCGATATATTCTGGTAATGGCATGTTCATAAAATTTTCA

Coding sequence (CDS)

ATGGCAAGCAAATTGCTGACATGTTCTGCTGCTTCAACTCTGGTATCGAACAGGGCCTCATCCTACCCATTACCAATCGGGCTGGGCCTAGGTTCTGGGCTGCCACCAAAACCGTCAATTAGGAGGACCCCTTCTTCAAGGCCCTCTTTGGTGGTGAAAGCCCAACAGGGAATTGAGCCAATGTCAGGTGAAAAGTTCCACCAAAAGGTTGCACTACTTAACACCTCTCCTTATGTGCGAACTCCCTGGAATACTTCAGAGGACGAGCACGAGATCAGGATGTGGTTCGACATGCCAGGACTCGCAGCTGAGAACTTAGAAGTTGAAACTGTGGATGATTTGCTTGTCATTAGAGGTGACGGTGGCGTCGACGCGTTCGGAAACAAGATCTTGAGTCCATATGATAGCAGGGTTCAGCTTCCAAACAACTCATGGAAGGAAGAAATTACTGCTGTGTTCAAGAATGGTGTGCTCTACATTACTGTCCCTAAGATTACCAAGTTTGAGCACAAGATTATCCATGTTCCTGTTAGAGCCATTCAGTAA

Protein sequence

MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPSLVVKAQQGIEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVRAIQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01942.1Spo01942.1mRNA


Homology
[Close]
BLAST of Spo01942.1 vs. NCBI nr
Match: gi|902193027|gb|KNA12183.1| (hypothetical protein SOVF_128390 [Spinacia oleracea])

HSP 1 Score: 364.8 bits (935), Expect = 8.900e-98
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPSLVVKAQQGIEP 60
           MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPSLVVKAQQGIEP
Sbjct: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPSLVVKAQQGIEP 60

Query: 61  MSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGD 120
           MSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGD
Sbjct: 61  MSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGD 120

Query: 121 GGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVRAI 180
           GGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVRAI
Sbjct: 121 GGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVRAI 180

Query: 181 Q 182
           Q
Sbjct: 181 Q 181
[Close]
BLAST of Spo01942.1 vs. NCBI nr
Match: gi|731327227|ref|XP_010674414.1| (PREDICTED: small heat shock protein, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 268.5 bits (685), Expect = 8.700e-69
Identity = 136/186 (73.12%), Postives = 157/186 (84.41%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPS-LVVKAQQG-- 60
           MAS +LTCSA+  + +NRA   PLPIGLG  S +   P ++  PSSRPS LVVKAQQG  
Sbjct: 1   MASNVLTCSASVLVSNNRALKSPLPIGLGPCSVVSLTPPLK-APSSRPSGLVVKAQQGGS 60

Query: 61  ---IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDL 120
              ++P+  + FH+KVALL+TSPYVRTPWNT+EDEHEIRMWFDMPGLAAEN++V  VDDL
Sbjct: 61  PKKMDPLVADHFHKKVALLDTSPYVRTPWNTNEDEHEIRMWFDMPGLAAENIDVNVVDDL 120

Query: 121 LVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIH 180
           LVI+GDGGVDAFGNKI SPYDSRVQLP NSWKEEITAVFKNGVLYITVPKITKFEHK+IH
Sbjct: 121 LVIKGDGGVDAFGNKIFSPYDSRVQLPLNSWKEEITAVFKNGVLYITVPKITKFEHKVIH 180
[Close]
BLAST of Spo01942.1 vs. NCBI nr
Match: gi|731327229|ref|XP_010674415.1| (PREDICTED: small heat shock protein, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 261.2 bits (666), Expect = 1.400e-66
Identity = 131/186 (70.43%), Postives = 154/186 (82.80%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPS-LVVKAQQG-- 60
           MAS +LTCSA++ + +NRA   P PIG G  S +   P ++  PSSRPS LVVKAQQG  
Sbjct: 1   MASNVLTCSASTLVSNNRALGSPSPIGSGPRSAVSLTPPLK-APSSRPSGLVVKAQQGGS 60

Query: 61  ---IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDL 120
              ++P+  + FH+KVALL+T+PYVRTPWNTSED+HEIRMWFDMPGLA EN++V  VDDL
Sbjct: 61  PRNVDPLVTDHFHKKVALLDTNPYVRTPWNTSEDDHEIRMWFDMPGLAGENIDVNIVDDL 120

Query: 121 LVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIH 180
           LVI+GDGGVDAFGNKI SPYDSRVQLP NSWKEE+TAVFKNGVLYITVPKITK EHKIIH
Sbjct: 121 LVIKGDGGVDAFGNKIFSPYDSRVQLPFNSWKEEVTAVFKNGVLYITVPKITKIEHKIIH 180
[Close]
BLAST of Spo01942.1 vs. NCBI nr
Match: gi|902193026|gb|KNA12182.1| (hypothetical protein SOVF_128380 [Spinacia oleracea])

HSP 1 Score: 259.2 bits (661), Expect = 5.300e-66
Identity = 133/189 (70.37%), Postives = 154/189 (81.48%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAAST-LVSNR---ASSYPLPIGLGLGSGLPPKPSIRRTPSSRPSLVVKAQQ 60
           MAS +LTCSAA+T LVSN    +   P  IGLG  S +   PS++      PS+VV+AQQ
Sbjct: 1   MASNVLTCSAAATTLVSNNRVVSGRSPAMIGLGQRSMVSLTPSLKT-----PSMVVRAQQ 60

Query: 61  G-----IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETV 120
           G     ++P++ E FH+KVALL TSPYVRTPWNT+EDEHEIRMWFDMPGLA EN++V  +
Sbjct: 61  GGSPKKMDPVTAEHFHKKVALLETSPYVRTPWNTNEDEHEIRMWFDMPGLAGENIDVNVI 120

Query: 121 DDLLVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHK 180
           DDLLVI+GDGGVDAFGNKI SPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHK
Sbjct: 121 DDLLVIKGDGGVDAFGNKIFSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHK 180
[Close]
BLAST of Spo01942.1 vs. NCBI nr
Match: gi|731368725|ref|XP_010696304.1| (PREDICTED: small heat shock protein, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 258.5 bits (659), Expect = 9.000e-66
Identity = 132/184 (71.74%), Postives = 155/184 (84.24%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRP-SLVVKAQQG-- 60
           MA+ +LT S+ STLVS+R    PLP+GL   S L   PS  + PSSRP  LVV+AQQG  
Sbjct: 1   MATNMLT-SSPSTLVSSRGFPSPLPVGLCPPSVLSAAPS--KKPSSRPCGLVVRAQQGGG 60

Query: 61  --IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLL 120
             ++PM+GE FH+KVAL+ TSPYVRTPWNTSEDEHEI+MWFDMPGLAAEN+EV+ VD+LL
Sbjct: 61  QQMDPMTGEHFHKKVALIETSPYVRTPWNTSEDEHEIKMWFDMPGLAAENIEVDVVDNLL 120

Query: 121 VIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHV 180
           VI+G+GG+DAFG KI SPYDSRVQLP NSW+EEITA+FKNGVLYITVPKITKFEHKIIH+
Sbjct: 121 VIKGEGGIDAFGRKIFSPYDSRVQLPTNSWREEITAMFKNGVLYITVPKITKFEHKIIHI 180
[Close]
BLAST of Spo01942.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZR6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_128390 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.200e-98
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPSLVVKAQQGIEP 60
           MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPSLVVKAQQGIEP
Sbjct: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPSLVVKAQQGIEP 60

Query: 61  MSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGD 120
           MSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGD
Sbjct: 61  MSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGD 120

Query: 121 GGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVRAI 180
           GGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVRAI
Sbjct: 121 GGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVRAI 180

Query: 181 Q 182
           Q
Sbjct: 181 Q 181
[Close]
BLAST of Spo01942.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPV6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g078720 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.000e-69
Identity = 136/186 (73.12%), Postives = 157/186 (84.41%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPS-LVVKAQQG-- 60
           MAS +LTCSA+  + +NRA   PLPIGLG  S +   P ++  PSSRPS LVVKAQQG  
Sbjct: 1   MASNVLTCSASVLVSNNRALKSPLPIGLGPCSVVSLTPPLK-APSSRPSGLVVKAQQGGS 60

Query: 61  ---IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDL 120
              ++P+  + FH+KVALL+TSPYVRTPWNT+EDEHEIRMWFDMPGLAAEN++V  VDDL
Sbjct: 61  PKKMDPLVADHFHKKVALLDTSPYVRTPWNTNEDEHEIRMWFDMPGLAAENIDVNVVDDL 120

Query: 121 LVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIH 180
           LVI+GDGGVDAFGNKI SPYDSRVQLP NSWKEEITAVFKNGVLYITVPKITKFEHK+IH
Sbjct: 121 LVIKGDGGVDAFGNKIFSPYDSRVQLPLNSWKEEITAVFKNGVLYITVPKITKFEHKVIH 180
[Close]
BLAST of Spo01942.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPW5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g078730 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 9.700e-67
Identity = 131/186 (70.43%), Postives = 154/186 (82.80%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSIRRTPSSRPS-LVVKAQQG-- 60
           MAS +LTCSA++ + +NRA   P PIG G  S +   P ++  PSSRPS LVVKAQQG  
Sbjct: 1   MASNVLTCSASTLVSNNRALGSPSPIGSGPRSAVSLTPPLK-APSSRPSGLVVKAQQGGS 60

Query: 61  ---IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDL 120
              ++P+  + FH+KVALL+T+PYVRTPWNTSED+HEIRMWFDMPGLA EN++V  VDDL
Sbjct: 61  PRNVDPLVTDHFHKKVALLDTNPYVRTPWNTSEDDHEIRMWFDMPGLAGENIDVNIVDDL 120

Query: 121 LVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIH 180
           LVI+GDGGVDAFGNKI SPYDSRVQLP NSWKEE+TAVFKNGVLYITVPKITK EHKIIH
Sbjct: 121 LVIKGDGGVDAFGNKIFSPYDSRVQLPFNSWKEEVTAVFKNGVLYITVPKITKIEHKIIH 180
[Close]
BLAST of Spo01942.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QY42_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_128380 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.700e-66
Identity = 133/189 (70.37%), Postives = 154/189 (81.48%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAAST-LVSNR---ASSYPLPIGLGLGSGLPPKPSIRRTPSSRPSLVVKAQQ 60
           MAS +LTCSAA+T LVSN    +   P  IGLG  S +   PS++      PS+VV+AQQ
Sbjct: 1   MASNVLTCSAAATTLVSNNRVVSGRSPAMIGLGQRSMVSLTPSLKT-----PSMVVRAQQ 60

Query: 61  G-----IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETV 120
           G     ++P++ E FH+KVALL TSPYVRTPWNT+EDEHEIRMWFDMPGLA EN++V  +
Sbjct: 61  GGSPKKMDPVTAEHFHKKVALLETSPYVRTPWNTNEDEHEIRMWFDMPGLAGENIDVNVI 120

Query: 121 DDLLVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHK 180
           DDLLVI+GDGGVDAFGNKI SPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHK
Sbjct: 121 DDLLVIKGDGGVDAFGNKIFSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHK 180
[Close]
BLAST of Spo01942.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R078_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_122130 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.200e-66
Identity = 133/193 (68.91%), Postives = 156/193 (80.83%), Query Frame = 1 

		  

Query: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSI------RRTPSSRPSLVVKA 60
           MASK+L CS  ST+VSNRA + PLP+GL     +   PS+      ++ PSSR SLVV+A
Sbjct: 1   MASKVLACSV-STVVSNRAFNSPLPVGL-----VSSAPSVVSAGQPKKKPSSRSSLVVRA 60

Query: 61  QQG-------IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLE 120
           QQG         PM+GE FH+KVALL TSPYVRTPWNTSEDE+EIRMWFDMPG AAEN+E
Sbjct: 61  QQGGGQPIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIE 120

Query: 121 VETVDDLLVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITK 180
           V+ VD+LLVI+G+GG+DAFG KI SPYD+RVQLP+NSW EEITAVFKNGVLYITVPKITK
Sbjct: 121 VDVVDNLLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITK 180
[Close]
BLAST of Spo01942.1 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.200e-23
Identity = 53/107 (49.53%), Postives = 76/107 (71.03%), Query Frame = 1 

		  

Query: 79  VRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRG-------DGGVDAFGNKIL 138
           +R PW+  ++EHEIRM FDMPGLA E+++V   DD+LVI+G        GG D++ ++  
Sbjct: 76  IRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTY 135

Query: 139 SPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVR 179
           S YD+R++LP+N  K+++ A  KNGVLYIT+PK TK E K+I V V+
Sbjct: 136 SSYDTRLKLPDNCEKDKVKAELKNGVLYITIPK-TKVERKVIDVQVQ 181
[Close]
BLAST of Spo01942.1 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.400e-21
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1 

		  

Query: 79  VRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGD-----GGVDAFGNKILSP 138
           +R PW   ++EHEIRM FDMPG++ E+++V   DD+LVI+ D     GG D +  K  S 
Sbjct: 129 IRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDCWSRKSYSC 188

Query: 139 YDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVR 179
           YD+R++LP+N  KE++ A  K+GVLYIT+PK TK E  +I V ++
Sbjct: 189 YDTRLKLPDNCEKEKVKAELKDGVLYITIPK-TKIERTVIDVQIQ 232
[Close]
BLAST of Spo01942.1 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.000e-20
Identity = 47/104 (45.19%), Postives = 74/104 (71.15%), Query Frame = 1 

		  

Query: 79  VRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRG----DGGVDAFGNKILSPY 138
           +R PW+  E+EHEI+M FDMPGL+ E++++   D++LVI+G    +   D++  + +S Y
Sbjct: 125 IRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSY 184

Query: 139 DSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVR 179
            +R+QLP+N  K++I A  KNGVL+IT+PK TK E K+I V ++
Sbjct: 185 GTRLQLPDNCEKDKIKAELKNGVLFITIPK-TKVERKVIDVQIQ 227
[Close]
BLAST of Spo01942.1 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.100e-18
Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = 1 

		  

Query: 79  VRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRG-----DGGVDAFGNKILSP 138
           +R PW+  +DE+EI+M FDMPGL+ E ++V   DD+LVI+G     + G D    +  S 
Sbjct: 138 IRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSS 197

Query: 139 YDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVR 179
           YD+R+ LP+N  K+++ A  KNGVL I++PK TK E K+  V ++
Sbjct: 198 YDTRLSLPDNVDKDKVKAELKNGVLLISIPK-TKVEKKVTDVEIK 241
[Close]
BLAST of Spo01942.1 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.300e-18
Identity = 47/105 (44.76%), Postives = 71/105 (67.62%), Query Frame = 1 

		  

Query: 79  VRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRG------DGGVDAFGNKILS 138
           +RTPW+  +DE+EI+M FDMPGL+ E+++V   +D+LVI+G      DG       +  S
Sbjct: 131 IRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYS 190

Query: 139 PYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPV 178
            YD+R+ LP+N  K++I A  KNGVL+I++PK T+ E K+I V +
Sbjct: 191 SYDTRLSLPDNVVKDKIKAELKNGVLFISIPK-TEVEKKVIDVQI 234
[Close]
BLAST of Spo01942.1 vs. TAIR (Arabidopsis)
Match: AT4G27670.1 (heat shock protein 21)

HSP 1 Score: 100.5 bits (249), Expect = 1.100e-21
Identity = 47/104 (45.19%), Postives = 74/104 (71.15%), Query Frame = 1 

		  

Query: 79  VRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRG----DGGVDAFGNKILSPY 138
           +R PW+  E+EHEI+M FDMPGL+ E++++   D++LVI+G    +   D++  + +S Y
Sbjct: 125 IRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSY 184

Query: 139 DSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPVR 179
            +R+QLP+N  K++I A  KNGVL+IT+PK TK E K+I V ++
Sbjct: 185 GTRLQLPDNCEKDKIKAELKNGVLFITIPK-TKVERKVIDVQIQ 227
[Close]
BLAST of Spo01942.1 vs. TAIR (Arabidopsis)
Match: AT5G51440.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.800e-11
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1 

		  

Query: 79  VRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGDG----GVDAFGNKILSPY 138
           VR  WN  E +  + +  DMPGL+ E++++    + LVIRG+G    G D  G+     +
Sbjct: 107 VRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDG--RRF 166

Query: 139 DSRVQLPNNSWK-EEITAVFKNGVLYITVPKITKFE-HKIIHVPV 178
            SR++LP   +K +EI A  KNGVL + +PKI + E + I H+ V
Sbjct: 167 TSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNIRHINV 209
[Close]
BLAST of Spo01942.1 vs. TAIR (Arabidopsis)
Match: AT4G25200.1 (mitochondrion-localized small heat shock protein 23.6)

HSP 1 Score: 59.3 bits (142), Expect = 2.800e-9
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 1 

		  

Query: 80  RTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRG------DGGVDA-FGNKILS 139
           R  W+  E +  + +  DMPGL+ E++++    D LVIRG      DGG +   GN+   
Sbjct: 106 RRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNR--- 165

Query: 140 PYDSRVQLPNNSWK-EEITAVFKNGVLYITVPKITKFE 170
            + SR+ LP+  +K +EI A  KNGVL + +PK+ + E
Sbjct: 166 RFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQE 200
[Close]
BLAST of Spo01942.1 vs. TAIR (Arabidopsis)
Match: AT1G52560.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 3.800e-6
Identity = 27/114 (23.68%), Postives = 58/114 (50.88%), Query Frame = 1 

		  

Query: 74  NTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLEVETVDDLLVIRGDGGVDA-------- 133
           N +P+ +      E +   ++ +++PGL  E++++   D +L I+GD   +         
Sbjct: 119 NVNPF-QLMGQVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEED 178

Query: 134 --FGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITKFEHKIIHVPV 178
             + +K    Y++ + LP+++  E+I A  KNGVL + +P+  K +  +  + V
Sbjct: 179 EYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISV 231
The following BLAST results are available for this feature:
BLAST of Spo01942.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902193027|gb|KNA12183.1|8.9e-98100.hypothetical protein SOVF_1283... [more]
gi|731327227|ref|XP_010674414.1|8.7e-6973.1PREDICTED: small heat shock pr... [more]
gi|731327229|ref|XP_010674415.1|1.4e-6670.4PREDICTED: small heat shock pr... [more]
gi|902193026|gb|KNA12182.1|5.3e-6670.3hypothetical protein SOVF_1283... [more]
gi|731368725|ref|XP_010696304.1|9.0e-6671.7PREDICTED: small heat shock pr... [more]
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BLAST of Spo01942.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QZR6_SPIOL6.2e-98100.Uncharacterized protein OS=Spi... [more]
A0A0J8CPV6_BETVU6.0e-6973.1Uncharacterized protein OS=Bet... [more]
A0A0J8CPW5_BETVU9.7e-6770.4Uncharacterized protein OS=Bet... [more]
A0A0K9QY42_SPIOL3.7e-6670.3Uncharacterized protein OS=Spi... [more]
A0A0K9R078_SPIOL8.2e-6668.9Uncharacterized protein OS=Spi... [more]
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BLAST of Spo01942.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
HS22C_SOYBN3.2e-2349.5Small heat shock protein, chlo... [more]
HS21C_PEA1.4e-2147.6Small heat shock protein, chlo... [more]
HS25P_ARATH2.0e-2045.125.3 kDa heat shock protein, c... [more]
HS22C_PETHY3.1e-1843.8Small heat shock protein, chlo... [more]
HS21C_SOLLC5.3e-1844.7Small heat shock protein, chlo... [more]
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BLAST of Spo01942.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G27670.11.1e-2145.1heat shock protein 21[more]
AT5G51440.11.8e-1138.1HSP20-like chaperones superfam... [more]
AT4G25200.12.8e-936.7mitochondrion-localized small ... [more]
AT1G52560.13.8e-623.6HSP20-like chaperones superfam... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 86..177
score: 3.9
IPR002068Alpha crystallin/Hsp20 domainPROFILEPS01031HSP20coord: 84..164
score: 13
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 71..177
score: 1.3
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 71..177
score: 2.96
NoneNo IPR availablePANTHERPTHR11527:SF16725.3 KDA HEAT SHOCK PROTEIN, CHLOROPLASTICcoord: 79..180
score: 2.7

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo109690.71Barchart | Table
Spo197220.68Barchart | Table
Spo224370.66Barchart | Table
Spo243680.66Barchart | Table
Spo156960.65Barchart | Table