Spo01986 (gene) | SpinachBase

Overview


Name	Spo01986
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Homeobox-leucine zipper protein ATHB-52 (HD-ZIP protein ATHB-52) (Homeodomain transcription factor ATHB-52)
Location	SpoScf_00564 : 45678 .. 46157 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTCCACTATGAAAACACAACATCCACAACCCAAACCCAAATGCACTAGGAAGAGGCTAACCCAAGACCAAGTTAGGCTATTAGAGGCCAGTTTCAAGTTAGAACGAAAACTCGACATGGACCGGAAGTTCCACTTGGCTCAAGAATTAGGCATTCCTACACGACAAGTCGCGATATGGTACCAAAATAAGCGGGCTAGGTGGAAGAGCCAAAGCCTAGAGATGGGCTATACGACCCTCCAAAAAAGGCTTGAGATTGCCTTAGTCGAGAACCAGAGGCTCGAGAGGGAAGTCCAAAGACTTAGCCAAGAGCTTAAAAATGTGGGCCAGATGTTGGTGGCTTCAACCTCGTCACCAAATTCATATGGTTGTCATCATGAAGAAGGTAGCTCGGGTTTGATAATTGGTGAGCCTGGTAGATGCTTACATAATGAGCTTTATGCTTGTTTTATTGCTACTAATGAAGAACAACTTTAA

mRNA sequence

ATGTACTCCACTATGAAAACACAACATCCACAACCCAAACCCAAATGCACTAGGAAGAGGCTAACCCAAGACCAAGTTAGGCTATTAGAGGCCAGTTTCAAGTTAGAACGAAAACTCGACATGGACCGGAAGTTCCACTTGGCTCAAGAATTAGGCATTCCTACACGACAAGTCGCGATATGGTACCAAAATAAGCGGGCTAGGTGGAAGAGCCAAAGCCTAGAGATGGGCTATACGACCCTCCAAAAAAGGCTTGAGATTGCCTTAGTCGAGAACCAGAGGCTCGAGAGGGAAGTCCAAAGACTTAGCCAAGAGCTTAAAAATGTGGGCCAGATGTTGGTGGCTTCAACCTCGTCACCAAATTCATATGGTTGTCATCATGAAGAAGGTAGCTCGGGTTTGATAATTGGTGAGCCTGGTAGATGCTTACATAATGAGCTTTATGCTTGTTTTATTGCTACTAATGAAGAACAACTTTAA

Coding sequence (CDS)

ATGTACTCCACTATGAAAACACAACATCCACAACCCAAACCCAAATGCACTAGGAAGAGGCTAACCCAAGACCAAGTTAGGCTATTAGAGGCCAGTTTCAAGTTAGAACGAAAACTCGACATGGACCGGAAGTTCCACTTGGCTCAAGAATTAGGCATTCCTACACGACAAGTCGCGATATGGTACCAAAATAAGCGGGCTAGGTGGAAGAGCCAAAGCCTAGAGATGGGCTATACGACCCTCCAAAAAAGGCTTGAGATTGCCTTAGTCGAGAACCAGAGGCTCGAGAGGGAAGTCCAAAGACTTAGCCAAGAGCTTAAAAATGTGGGCCAGATGTTGGTGGCTTCAACCTCGTCACCAAATTCATATGGTTGTCATCATGAAGAAGGTAGCTCGGGTTTGATAATTGGTGAGCCTGGTAGATGCTTACATAATGAGCTTTATGCTTGTTTTATTGCTACTAATGAAGAACAACTTTAA

Protein sequence

MYSTMKTQHPQPKPKCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSLEMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSYGCHHEEGSSGLIIGEPGRCLHNELYACFIATNEEQL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo01986.1	Spo01986.1	mRNA

Homology

[Close]

BLAST of Spo01986.1 vs. NCBI nr
Match: gi|731350392|ref|XP_010686481.1| (PREDICTED: homeobox-leucine zipper protein ATHB-52 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 210.3 bits (534), Expect = 2.500e-51
Identity = 116/157 (73.89%), Postives = 131/157 (83.44%), Query Frame = 1


		  
Query: 1   MYSTMKTQHP--QPKPKCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQV 60
           MYS   T +   +P PKCT KRLT++QVRLLEASFKL+RKLDMDRKFHLAQELGIPTRQV
Sbjct: 1   MYSPKTTHNKKHEPHPKCTNKRLTKEQVRLLEASFKLDRKLDMDRKFHLAQELGIPTRQV 60

Query: 61  AIWYQNKRARWKSQSLEMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTS 120
           AIWYQNKRARWKSQSLEMGY TLQ+RLE ALVEN+RLE+EVQRLS EL+N+ QMLVASTS
Sbjct: 61  AIWYQNKRARWKSQSLEMGYKTLQQRLESALVENKRLEKEVQRLSNELENMNQMLVASTS 120

Query: 121 --SPNSYGCHHEEGSSGLIIG-EPGRCLHNELYACFI 153
             SPNSY C +EE +SGL+IG +P      +LYAC I
Sbjct: 121 TASPNSYVC-NEEDASGLMIGDQPNSFFPRDLYACLI 156

[Close]

BLAST of Spo01986.1 vs. NCBI nr
Match: gi|225443586|ref|XP_002273463.1| (PREDICTED: homeobox-leucine zipper protein ATHB-52 [Vitis vinifera])

HSP 1 Score: 144.8 bits (364), Expect = 1.300e-31
Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = 1


		  
Query: 6   KTQHPQPKPKCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNK 65
           ++Q  + +PK ++KRLT+DQVRLLE SF L  KLD DRK  LAQELGIP RQVAIWYQNK
Sbjct: 5   QSQARKHQPKFSKKRLTKDQVRLLETSFDLNNKLDSDRKLQLAQELGIPPRQVAIWYQNK 64

Query: 66  RARWKSQSLEMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVA-----STSSP 125
           RARWK+QSLE+ Y  LQ RL+ AL + ++LE+EV RL QEL+   ++L++     ST + 
Sbjct: 65  RARWKNQSLELEYNALQLRLDAALGDKRKLEKEVDRLKQELQKAQEVLLSCNVTYSTLTS 124

Query: 126 NSYGCHHEEGSSGLIIGEPGRCLHNELYACFIATNEE 158
            S  C  E+GSS L +G+    L  ELYAC I   ++
Sbjct: 125 LSTSC-DEDGSSSL-LGDSKLGLDKELYACLIGGGDQ 159

[Close]

BLAST of Spo01986.1 vs. NCBI nr
Match: gi|697114958|ref|XP_009611399.1| (PREDICTED: homeobox-leucine zipper protein ATHB-52-like [Nicotiana tomentosiformis])

HSP 1 Score: 142.9 bits (359), Expect = 4.800e-31
Identity = 80/143 (55.94%), Postives = 101/143 (70.63%), Query Frame = 1


		  
Query: 15  KCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSL 74
           KC +KRLTQDQVRLLE SF    KLD +RK  LAQELG+P RQVAIWYQNKRARWKSQSL
Sbjct: 14  KCHKKRLTQDQVRLLEISFNSNNKLDSNRKSQLAQELGLPPRQVAIWYQNKRARWKSQSL 73

Query: 75  EMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSY----GCHHEEG 134
           E+ Y  LQ+RL+ A+++N+RL+ EV+RL +EL    +ML+A  ++ N+Y        E G
Sbjct: 74  EVDYKALQQRLDNAMLDNERLKLEVERLKEELNKAQEMLLAFNTTTNNYSSISSSCDEVG 133

Query: 135 SSGLIIGEPGR-CLHNELYACFI 153
           SS L + +  +  L  ELYAC I
Sbjct: 134 SSCLQLHDQSKHHLDKELYACLI 156

[Close]

BLAST of Spo01986.1 vs. NCBI nr
Match: gi|698510704|ref|XP_009800499.1| (PREDICTED: homeobox-leucine zipper protein ATHB-52-like [Nicotiana sylvestris])

HSP 1 Score: 142.5 bits (358), Expect = 6.300e-31
Identity = 81/143 (56.64%), Postives = 99/143 (69.23%), Query Frame = 1


		  
Query: 15  KCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSL 74
           KC +KRLTQDQVRLLE SF    KLD DRK  LAQELG+P RQVAIWYQNKRARWKSQSL
Sbjct: 14  KCHKKRLTQDQVRLLEISFNSNNKLDSDRKSQLAQELGLPPRQVAIWYQNKRARWKSQSL 73

Query: 75  EMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSY----GCHHEEG 134
           E+ Y  LQ+RL+ A+ +N+RL+ EV+RL +EL    +ML+A  ++ N+Y        E G
Sbjct: 74  EVDYKALQQRLDNAMSDNERLKLEVERLKEELNKAQEMLLAFNTTTNNYSSISSSCDEVG 133

Query: 135 SSGLIIGEPGR-CLHNELYACFI 153
           SS L +    +  L  ELYAC I
Sbjct: 134 SSCLQLHTQSKHHLDKELYACLI 156

[Close]

BLAST of Spo01986.1 vs. NCBI nr
Match: gi|565397457|ref|XP_006364310.1| (PREDICTED: homeobox-leucine zipper protein ATHB-52-like [Solanum tuberosum])

HSP 1 Score: 135.6 bits (340), Expect = 7.700e-29
Identity = 76/145 (52.41%), Postives = 97/145 (66.90%), Query Frame = 1


		  
Query: 15  KCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSL 74
           KC +KRL QDQVRLLE SF    KLD DRK  LAQELG+P RQVAIWYQNKRARWKSQSL
Sbjct: 14  KCHKKRLNQDQVRLLEISFSSNNKLDSDRKSQLAQELGLPPRQVAIWYQNKRARWKSQSL 73

Query: 75  EMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSY-----GCHHEE 134
           E+ Y TLQ+RL+ AL +N++L+ EV+RL +EL    ++L+   ++ N+Y      C    
Sbjct: 74  EVDYKTLQQRLDNALEDNEKLKLEVERLRKELNKNQEVLLGFNTTTNNYSSISSSCDEVG 133

Query: 135 GSSGLIIGEPGRCLH--NELYACFI 153
            +S L + +  +  H   E YAC I
Sbjct: 134 STSCLQLHDQSKHNHLDKEFYACLI 158

[Close]

BLAST of Spo01986.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BTX8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g182430 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.700e-51
Identity = 116/157 (73.89%), Postives = 131/157 (83.44%), Query Frame = 1


		  
Query: 1   MYSTMKTQHP--QPKPKCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQV 60
           MYS   T +   +P PKCT KRLT++QVRLLEASFKL+RKLDMDRKFHLAQELGIPTRQV
Sbjct: 1   MYSPKTTHNKKHEPHPKCTNKRLTKEQVRLLEASFKLDRKLDMDRKFHLAQELGIPTRQV 60

Query: 61  AIWYQNKRARWKSQSLEMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTS 120
           AIWYQNKRARWKSQSLEMGY TLQ+RLE ALVEN+RLE+EVQRLS EL+N+ QMLVASTS
Sbjct: 61  AIWYQNKRARWKSQSLEMGYKTLQQRLESALVENKRLEKEVQRLSNELENMNQMLVASTS 120

Query: 121 --SPNSYGCHHEEGSSGLIIG-EPGRCLHNELYACFI 153
             SPNSY C +EE +SGL+IG +P      +LYAC I
Sbjct: 121 TASPNSYVC-NEEDASGLMIGDQPNSFFPRDLYACLI 156

[Close]

BLAST of Spo01986.1 vs. UniProtKB/TrEMBL
Match: A5C5U4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00380 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.900e-32
Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = 1


		  
Query: 6   KTQHPQPKPKCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNK 65
           ++Q  + +PK ++KRLT+DQVRLLE SF L  KLD DRK  LAQELGIP RQVAIWYQNK
Sbjct: 5   QSQARKHQPKFSKKRLTKDQVRLLETSFDLNNKLDSDRKLQLAQELGIPPRQVAIWYQNK 64

Query: 66  RARWKSQSLEMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVA-----STSSP 125
           RARWK+QSLE+ Y  LQ RL+ AL + ++LE+EV RL QEL+   ++L++     ST + 
Sbjct: 65  RARWKNQSLELEYNALQLRLDAALGDKRKLEKEVDRLKQELQKAQEVLLSCNVTYSTLTS 124

Query: 126 NSYGCHHEEGSSGLIIGEPGRCLHNELYACFIATNEE 158
            S  C  E+GSS L +G+    L  ELYAC I   ++
Sbjct: 125 LSTSC-DEDGSSSL-LGDSKLGLDKELYACLIGGGDQ 159

[Close]

BLAST of Spo01986.1 vs. UniProtKB/TrEMBL
Match: M1D4I8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031777 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.400e-29
Identity = 76/145 (52.41%), Postives = 97/145 (66.90%), Query Frame = 1


		  
Query: 15  KCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSL 74
           KC +KRL QDQVRLLE SF    KLD DRK  LAQELG+P RQVAIWYQNKRARWKSQSL
Sbjct: 14  KCHKKRLNQDQVRLLEISFSSNNKLDSDRKSQLAQELGLPPRQVAIWYQNKRARWKSQSL 73

Query: 75  EMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSY-----GCHHEE 134
           E+ Y TLQ+RL+ AL +N++L+ EV+RL +EL    ++L+   ++ N+Y      C    
Sbjct: 74  EVDYKTLQQRLDNALEDNEKLKLEVERLRKELNKNQEVLLGFNTTTNNYSSISSSCDEVG 133

Query: 135 GSSGLIIGEPGRCLH--NELYACFI 153
            +S L + +  +  H   E YAC I
Sbjct: 134 STSCLQLHDQSKHNHLDKEFYACLI 158

[Close]

BLAST of Spo01986.1 vs. UniProtKB/TrEMBL
Match: K4B8Y4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.400e-29
Identity = 77/146 (52.74%), Postives = 100/146 (68.49%), Query Frame = 1


		  
Query: 15  KCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSL 74
           KC +KRL QDQ+RLLE SF    KLD DRKF LAQELG+P RQ+AIWYQNKRARWKSQSL
Sbjct: 14  KCHKKRLNQDQMRLLEISFSSNNKLDSDRKFQLAQELGLPPRQIAIWYQNKRARWKSQSL 73

Query: 75  EMGYTTLQKRLEIALVENQRLEREVQRLSQEL-KNVGQMLVASTSSPNSY-----GCHHE 134
           E+ Y TLQ+RL+ AL +N++L+ EV+RL +EL KN   +L  +T++ N+Y      C   
Sbjct: 74  EVDYKTLQQRLDNALEDNEKLKLEVERLRKELNKNQEVLLGFNTTTTNNYSSISSSCDEV 133

Query: 135 EGSSGLIIGEPGRCLH--NELYACFI 153
             +S L + +  +  H   + YAC I
Sbjct: 134 GSTSCLQLHDQSKHNHLDKDFYACLI 159

[Close]

BLAST of Spo01986.1 vs. UniProtKB/TrEMBL
Match: A0A0V0GUS2_SOLCH (Putative homeobox-leucine zipper protein ATHB-52-like (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.200e-29
Identity = 76/145 (52.41%), Postives = 96/145 (66.21%), Query Frame = 1


		  
Query: 15  KCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSL 74
           KC +KRL QDQVRLLE SF    KLD DRK  LAQELG+P RQVAIWYQNKRARWKSQSL
Sbjct: 1   KCHKKRLNQDQVRLLEISFSSNNKLDSDRKSQLAQELGLPPRQVAIWYQNKRARWKSQSL 60

Query: 75  EMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSY-----GCHHEE 134
           E  Y TLQ+RL+ AL +N++L+ EV+RL +EL    ++L+   ++ N+Y      C    
Sbjct: 61  EADYKTLQQRLDNALEDNEKLKLEVERLRKELNKNQEVLLGFNTTTNNYSSISSSCDEVG 120

Query: 135 GSSGLIIGEPGRCLH--NELYACFI 153
            +S L + +  +  H   E YAC I
Sbjct: 121 STSCLQLHDQSKHNHLDKEFYACLI 145

[Close]

BLAST of Spo01986.1 vs. ExPASy Swiss-Prot
Match: ATB52_ARATH (Homeobox-leucine zipper protein ATHB-52 OS=Arabidopsis thaliana GN=ATHB-52 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.800e-22
Identity = 64/151 (42.38%), Postives = 94/151 (62.25%), Query Frame = 1


		  
Query: 8   QHPQPKPKCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRA 67
           ++ Q + K  +KRLTQDQVR LE  F + +KL+ D K  L+ +LG+P RQVA+W+QNKRA
Sbjct: 2   ENSQSQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRA 61

Query: 68  RWKSQSLEMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTS--SP---NS 127
           R+K+QSLE+ + TLQ + E AL +  +LE +VQ L  ELK     L   T+  SP   ++
Sbjct: 62  RFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQLALFTNQDSPVDNSN 121

Query: 128 YGCHHEEGSSGLIIGEPGRCLHNELYACFIA 154
            G   E+    +++        +ELYACF++
Sbjct: 122 LGSCDEDHDDQVVV-------FDELYACFVS 145

[Close]

BLAST of Spo01986.1 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.800e-16
Identity = 42/89 (47.19%), Postives = 64/89 (71.91%), Query Frame = 1


		  
Query: 18  RKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSLEMG 77
           +++L+ +QVR+LE SF+ + KL+ +RK  LA ELG+  RQVA+W+QN+RARWK++ +E  
Sbjct: 62  KRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDE 121

Query: 78  YTTLQKRLEIALVENQRLEREVQRLSQEL 107
           YT L+   E  +VE  RL+ EV  L ++L
Sbjct: 122 YTKLKNAYETTVVEKCRLDSEVIHLKEQL 150

[Close]

BLAST of Spo01986.1 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.300e-15
Identity = 49/125 (39.20%), Postives = 76/125 (60.80%), Query Frame = 1


		  
Query: 18  RKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSLEMG 77
           +KRLT  Q+  LE SF+ E KLD DRK  L++ELG+  RQ+A+W+QN+RARWK++ LE  
Sbjct: 78  KKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQL 137

Query: 78  YTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSYGCHHEEGS---SGL 137
           Y +L++  ++   E Q L  EV++L   L++ G  L+    S  +     EE +   S +
Sbjct: 138 YDSLRQEYDVVSREKQMLHDEVKKLRALLRDQG--LIKKQISAGTIKVSGEEDTVEISSV 197

Query: 138 IIGEP 140
           ++  P
Sbjct: 198 VVAHP 200

[Close]

BLAST of Spo01986.1 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.700e-15
Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 1


		  
Query: 18  RKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSLEMG 77
           ++RL+ +QV +LE SF+ ERKL+  RK HLA ELG+  +QVA+W+QN+RAR KS+ LE  
Sbjct: 63  KRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEE 122

Query: 78  YTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSYGCHHEEGSSGLIIG 137
           ++ L+   + A++    LE EV RL + L  V +  V    S  + G H   G  G I+G
Sbjct: 123 FSKLKHAHDAAILHKCHLENEVLRLKERLV-VAEEEVRRLRS--AAGSHTASGEGGDIMG 182

Query: 138 EPG 141
             G
Sbjct: 183 LGG 182

[Close]

BLAST of Spo01986.1 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.700e-15
Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 1


		  
Query: 18  RKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSLEMG 77
           ++RL+ +QV +LE SF+ ERKL+  RK HLA ELG+  +QVA+W+QN+RAR KS+ LE  
Sbjct: 63  KRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEE 122

Query: 78  YTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSYGCHHEEGSSGLIIG 137
           ++ L+   + A++    LE EV RL + L  V +  V    S  + G H   G  G I+G
Sbjct: 123 FSKLKHAHDAAILHKCHLENEVLRLKERLV-VAEEEVRRLRS--AAGSHTASGEGGDIMG 182

Query: 138 EPG 141
             G
Sbjct: 183 LGG 182

[Close]

BLAST of Spo01986.1 vs. TAIR (Arabidopsis)
Match: AT5G53980.1 (homeobox protein 52)

HSP 1 Score: 107.1 bits (266), Expect = 1.000e-23
Identity = 64/151 (42.38%), Postives = 94/151 (62.25%), Query Frame = 1


		  
Query: 8   QHPQPKPKCTRKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRA 67
           ++ Q + K  +KRLTQDQVR LE  F + +KL+ D K  L+ +LG+P RQVA+W+QNKRA
Sbjct: 2   ENSQSQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRA 61

Query: 68  RWKSQSLEMGYTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTS--SP---NS 127
           R+K+QSLE+ + TLQ + E AL +  +LE +VQ L  ELK     L   T+  SP   ++
Sbjct: 62  RFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQLALFTNQDSPVDNSN 121

Query: 128 YGCHHEEGSSGLIIGEPGRCLHNELYACFIA 154
            G   E+    +++        +ELYACF++
Sbjct: 122 LGSCDEDHDDQVVV-------FDELYACFVS 145

[Close]

BLAST of Spo01986.1 vs. TAIR (Arabidopsis)
Match: AT2G18550.1 (homeobox protein 21)

HSP 1 Score: 84.7 bits (208), Expect = 5.500e-17
Identity = 42/89 (47.19%), Postives = 64/89 (71.91%), Query Frame = 1


		  
Query: 18  RKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSLEMG 77
           +++L+ +QVR+LE SF+ + KL+ +RK  LA ELG+  RQVA+W+QN+RARWK++ +E  
Sbjct: 62  KRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDE 121

Query: 78  YTTLQKRLEIALVENQRLEREVQRLSQEL 107
           YT L+   E  +VE  RL+ EV  L ++L
Sbjct: 122 YTKLKNAYETTVVEKCRLDSEVIHLKEQL 150

[Close]

BLAST of Spo01986.1 vs. TAIR (Arabidopsis)
Match: AT5G03790.1 (homeobox 51)

HSP 1 Score: 84.3 bits (207), Expect = 7.200e-17
Identity = 49/125 (39.20%), Postives = 76/125 (60.80%), Query Frame = 1


		  
Query: 18  RKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSLEMG 77
           +KRLT  Q+  LE SF+ E KLD DRK  L++ELG+  RQ+A+W+QN+RARWK++ LE  
Sbjct: 78  KKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQL 137

Query: 78  YTTLQKRLEIALVENQRLEREVQRLSQELKNVGQMLVASTSSPNSYGCHHEEGS---SGL 137
           Y +L++  ++   E Q L  EV++L   L++ G  L+    S  +     EE +   S +
Sbjct: 138 YDSLRQEYDVVSREKQMLHDEVKKLRALLRDQG--LIKKQISAGTIKVSGEEDTVEISSV 197

Query: 138 IIGEP 140
           ++  P
Sbjct: 198 VVAHP 200

[Close]

BLAST of Spo01986.1 vs. TAIR (Arabidopsis)
Match: AT1G69780.1 (Homeobox-leucine zipper protein family)

HSP 1 Score: 82.4 bits (202), Expect = 2.700e-16
Identity = 45/118 (38.14%), Postives = 70/118 (59.32%), Query Frame = 1


		  
Query: 18  RKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSLEMG 77
           ++RL  +QV+ LE +F+L  KL+ +RK  LA+ LG+  RQ+AIW+QN+RARWK++ LE  
Sbjct: 86  KRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 145

Query: 78  YTTLQKRLEIALVENQRLEREVQRLSQE---LKNVGQMLVASTSSPNSYGCHHEEGSS 133
           Y TL+++ +    EN  L+   Q+L  E   LKN  Q    + +      C +   +S
Sbjct: 146 YDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETEGSCSNRSDNS 203

[Close]

BLAST of Spo01986.1 vs. TAIR (Arabidopsis)
Match: AT5G15150.1 (homeobox 3)

HSP 1 Score: 81.3 bits (199), Expect = 6.100e-16
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 1


		  
Query: 18  RKRLTQDQVRLLEASFKLERKLDMDRKFHLAQELGIPTRQVAIWYQNKRARWKSQSLEMG 77
           +KRL  +QVR LE SF+L  KL+ +RK  LA+ LG+  RQ+AIW+QN+RARWK++ LE  
Sbjct: 116 KKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERD 175

Query: 78  YTTLQKRLEIALVENQRLEREVQRLSQEL 107
           Y +L+K+ ++   +N  L    ++L  EL
Sbjct: 176 YDSLKKQFDVLKSDNDSLLAHNKKLHAEL 204

The following BLAST results are available for this feature:

BLAST of Spo01986.1 vs. NCBI nr
BLAST of Spo01986.1 vs. UniProtKB/TrEMBL
BLAST of Spo01986.1 vs. ExPASy Swiss-Prot
BLAST of Spo01986.1 vs. TAIR (Arabidopsis)

BLAST of Spo01986.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731350392\|ref\|XP_010686481.1\|	2.5e-51	73.8	PREDICTED: homeobox-leucine zi...	[more]
gi\|225443586\|ref\|XP_002273463.1\|	1.3e-31	53.5	PREDICTED: homeobox-leucine zi...	[more]
gi\|697114958\|ref\|XP_009611399.1\|	4.8e-31	55.9	PREDICTED: homeobox-leucine zi...	[more]
gi\|698510704\|ref\|XP_009800499.1\|	6.3e-31	56.6	PREDICTED: homeobox-leucine zi...	[more]
gi\|565397457\|ref\|XP_006364310.1\|	7.7e-29	52.4	PREDICTED: homeobox-leucine zi...	[more]

BLAST of Spo01986.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8BTX8_BETVU	1.7e-51	73.8	Uncharacterized protein OS=Bet...	[more]
A5C5U4_VITVI	8.9e-32	53.5	Putative uncharacterized prote...	[more]
M1D4I8_SOLTU	5.4e-29	52.4	Uncharacterized protein OS=Sol...	[more]
K4B8Y4_SOLLC	5.4e-29	52.7	Uncharacterized protein OS=Sol...	[more]
A0A0V0GUS2_SOLCH	9.2e-29	52.4	Putative homeobox-leucine zipp...	[more]

BLAST of Spo01986.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ATB52_ARATH	1.8e-22	42.3	Homeobox-leucine zipper protei...	[more]
ATB21_ARATH	9.8e-16	47.1	Homeobox-leucine zipper protei...	[more]
ATB51_ARATH	1.3e-15	39.2	Putative homeobox-leucine zipp...	[more]
HOX14_ORYSI	1.7e-15	42.2	Homeobox-leucine zipper protei...	[more]
HOX14_ORYSJ	1.7e-15	42.2	Homeobox-leucine zipper protei...	[more]

BLAST of Spo01986.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G53980.1	1.0e-23	42.3	homeobox protein 52	[more]
AT2G18550.1	5.5e-17	47.1	homeobox protein 21	[more]
AT5G03790.1	7.2e-17	39.2	homeobox 51	[more]
AT1G69780.1	2.7e-16	38.1	Homeobox-leucine zipper protei...	[more]
AT5G15150.1	6.1e-16	46.0	homeobox 3	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 15..70 score: 8.0
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 14..76 score: 1.9
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 12..72 score: 16
IPR009057	Homeodomain-like	GENE3D	1.10.10.60		coord: 18..78 score: 1.8
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 7..73 score: 2.4
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 47..70 scor
None	No IPR available	unknown	Coil	Coil	coord: 78..112 scor
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 18..113 score: 1.8
None	No IPR available	PANTHER	PTHR24326:SF257	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-52	coord: 18..113 score: 1.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006979	response to oxidative stress
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0020037	heme binding
molecular_function	GO:0004601	peroxidase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo00279	0.72	Barchart \| Table
Spo23782	0.67	Barchart \| Table
Spo08095	0.66	Barchart \| Table
Spo01650	0.65	Barchart \| Table
Spo26539	0.65	Barchart \| Table