Spo02098 (gene)

Overview
NameSpo02098
Typegene
OrganismSpinacia oleracea (Spinach)
Description30S ribosomal protein S16, chloroplastic
LocationSpoScf_00424 : 309130 .. 319813 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGGCCGCGACCACGACACAGCAGCAGCGCGGCCTACGGCCCACTGGATGTGCGTGTCCGTGTGTTTTGGCTTGCGGGCTTGCTAGCCGGCCTTGCCTCTTGGCTTGGTCAGTTAGTAAGGTTATGTAAATAACCTTACAACCTAATTTCCAACTTAACACAATCACAATTCAGATTACACACAACCCTAGGAGAAAACAGAGAACCCTAATTCTCTCTGTGCCTCCATAGTGTGTTCATCCCAAAAAGCAAAGTATCTTGATCAATTGTCTAAGCTACGATAATCAAGACGGATCTGACGTGTCGGTGAACCAAGTAGAGGAACGACAAGTGGAGTTCTTTGTTCGTGTTCGTTGACATATTATTGTGGAAAACACGCTTCGAATGTAAGTTTGCTTAAGCTGTGCTTTATACATGTTTCCTGGCTTTGGGGATTGTTCCACACATGTTATTATGTTTAACTCTATTCCCCTACAGTTTTCCAGCAAGACTCCCCCCATTGTTCATACTCAAGGTATATACATTCCAAGAGTTTTGAAGCTCTTTGGGTTACACTTTACGTTAATTAGTATATTGTGTTCAAGGCGACTCAAGACTCTATACAAGACACAACATACCAACAATTGAACAATTAAACAATTCAACAATGACACTTCATTATTTTACTTCTTTAGGACTTGTGATCAAACATAGACTCAAGTGAAATTACTCCCATTGTTCCTTCTCAAAAACACTGTTTGAGATAACCCGACATTGCCTATTAACAAGCGGGGTGTGCCCTTAGCACGAATTGTCCTTAATTCAATTCACATAGACTCTCTAACATATTCTACCCCTTGGTAGAATATATATTGCTCACTGGCAATATTCGACTGGCTCAATAATTATGCTAGACATTCTGTACTATAGCATAATAATAATAATAATAATAATAATAATAATAATAATAACAACTTGCATGCGCACTACTCATACATGCAAACCAACTTGAACAACATGTTTGACATAATTCAACGATTATAAAAGTCCATAACATGATAGTTCAATAGAATCTATAAAGCATAATTCAATTCATAACATGCTCGTTCACATAGATTCAACAATAATAATTAATAACATGCTCGTTCTTAATACTCCCTCCGTCCCATATTAGTTGTTACACTTACCTTTGCACATTGTTTTAGGTGATAAGTGGTTGTTTGATTATCAATTGTTATTTTATTGAAAAAGTAGATGTGGTAGGAGTAAGTGGGGTATTTTTTTTAATTGAATGAGAGAGGGTGTGGGGACAAAAAAGAATTTAGTGGGAAGAGAGAGACAATATAATAATTGTGGGGTCATTCCTAATTTAGAAGTGTAACAACTAATCTGGGACGGACAAAAAAGGAAAGTGTAACAACTAATCTGGGACGGAGGGAGTATCAAACATGAATTCGTAACAACATATTCATTCCCAATCATCAAACATGAATTCATAACAACATAAGTTCACATGATTCGCATTCAATACACTTCACAAAGTCCTCAAGGGATGGGTGGTCACCCTAGTCTTGTACGTACCTGGAATACCTAAGTACGGGGGCCACTGTGCGAATCACGACTCACTAGAAATCAACTCCTATAAACAAAACAAGAGAACTAAGTTATTATCCATGTTTACTAAATTTCCAGCAACTATTTAAGAAGCTAAAGCTCTTAGTTTAATTAAAAATCATTCATTAATTGGTAATTTAATAGTCTCAAATAGTCAACTCAAGTCCTAGCATAAAAACATTGACTTTTTAGCTTTAAAACCCTTAAAAACCAACCTTTTAAAGCTTATAAACATTCTGAAAATTTAGATTGATTCCCATAATTTAAATTGTCATTAAATTATGTACATCAATTGCTCAATCAATTTGAAACCAAAACCCTATCAATGGTTTAAATCCGAAAACGTGTTTTGACTTCAAAAATCAACACTTTATAAACATATAAAATCTGAAAATTATAAACTCAATCATCAAAACCAATTTCTTTAATTAAAACATACTACTAACCCAATACGGTGTTCATAACCGTTTTATTTAATCCAAATAATCCAATAATTAAACTTAATCACAATAATTAAATCAATTTAAAACTGAAAATTAATATTTTTGAAAACATAATTTGATTATCCCAATTCAACATCACACACACACACACAACAATTAATTGTGTTGTGTGTGTGTGCGTCGAACAAACAATGCAACAACAACAACACACGCACGCACCGCAGCAAGCAGTGCGCACGAGCACGCGACAAAGAGCGAGAGGGACAGGCGCTGGGCGCACAACACAGCGACGAGCGGGCACGAGGCTTGCGTGGCTGCTGGGCGGGACGACGCACACGCAACACACAGCAGCAGCGAGGGCGCTGCGCTGCGGGGCGAGGCGACGAGAGAGAGGGCAGTGAGGGCTTGCGCGCACGGCTGGGCACGAATGCCTTGGGCTGCACGCACGACTGGTCGGACGAGAGGATAGGGGAGGGTGCCGCAAGGAGGGAGAAAGTGAGGAGAGAGAGGGAGTGCTGAAATTTTTGTGAGGGTTTAATGAGAGGGTCTATTTATAGTTTTTCTCTCCTTGTGGGCTAGGTTATGGTATTTTTGAGTTGGGCTCATTACCGGGCTCATTTAAGTTTACTCCTTGTAGGCTTTGTTGGGTTTAATTAAAACAAAACGACCGGGCTTTAAGTTTATTAAATTCGTTTTTGAAATACGATCCAACAATTCCCGATTAAATAAATTCCTTGAATTTATTTAATAAAATCCGGTTTTTGAAATTCGCATTGATAAAAGCGCACTTAATTCTCATTAAATGAAATTAATTTATAAAAATACACGAAATGTTTTATAAATATAATAAAATATATTTATAATTATAGAAAAATACGAGGTATTACAATTAATTAGTTTAAAATATTAGGTGTTGTGACAAGCTAATTTAACAATTAACTTATCATTGGTTGTAGTTAGGGACTTGCTTGCAATTTGCAAAAGTCTCAAGCTACTAGCTTAACCATTGGAGTGATTTTGATAAATTACCTTTGCCAAGCAAATTAGAACAACTCTAATGGTTGTAGCTAGGAACTTGCTTGTAATTTGCAAAAAAAAAATAAGCTACTAGCTTAACCATTAGAGTGATTTTGATAAATTAGATTGGCAAACTAATTTGCTTGGGAGAAAATTTGCCAATTGGAATGCAAAGTTAAAAATGAACTGTTAATTAAAAAGTTGACTCAATTAAATAGCAAGCTAGTTTGGTAAATTAACTTGCTAATACGAAGTATGACACAAACTAGCTAGAAAACAAATTAGCTTAAAATATTAGGTGGCATAACTACCTATTTTAACAATTAGCTTGCCATTGTAGTTGATCTTAGCTTAATTGGGAAAAATTGCGCAATTGGGATGAGCTATAACTAAAAGAACAAGTAAAAATGAATTATGTTGTAGTCTTGAACTGTCGATATATCATATGTAATAAATGATCGAGGTTGTCTTTTTGAAATAGGTGGTGGTAGTGGGGTAGGTCAAGAAAGTCACAATCATACCCGATATTCAGAGCGTCATAGATAGAATTGGCGGCTGCCATAAACAAAGTCGAGAATTTCAATCCGTTTGTTGTCTCCTTCGCTAACGCTCTGTAGGGTCAACATTAGGAAATTAGTCAGATTCAGTTCTTCCTATAGTTGCAACTTATCTCATATTGTGGAGAAGTGCACCCCTCTCGATCAAAACATAATACAACTGAAAAGCAGACCTAATTAAACAACAAGCTAGTTTGATAAATTAGCTTGTCATTGAGACACAAATTAGATCGAAAATAAATTAGCTTAAAATCATAGGTGGAAAGACAAACAATTTTTAAAACTAGTTTTTCATTACAGTTGTTGTTATGAATTTCTCGGAAAACCCAAAATATATATAAAAAAATTGCTCAGTAATGTAGCCCGAGCTAGGGGTGTTAAATTTCTGATATCAGATCCGATCCGATTCGATCCAAAACTTCGAATACCCAAAATTTTCAAAACGGAAAAATGTGATACGAATCCGATCCAAAGTTTTATGACTGGATATTTCGGATAGAATATCCGAAAATCCAAAATCAATCTGAATTGAAAAAATTTAAAAATATTCACATTTTACATTATTTTTTTCGGATATCCTATTCAAAATATCCGTAACCTTGATAATTTTTTGTTCCGAATATCCGATTCGAAATATCTGAAACCTTAAAACTGAATCGGATACCCAAAATTTCGAATCATCGTATTTTCGGAATGGATCAAATGAATTGGATATTTTTGCACACCCCTTAGCTCGAGCCATATACGGGGCTCCAATCGCATAACCCACGGATCCTTGTTTGCTACTCCGTAATTTCTAACTTGGTGGGTGCTGCTGTGCTGCAGCCTTGCGCCTGTTATTGTGGTTCGTCTTCTTCCGCAGGCTCTCAAGAAAAAACGTTTAGTTCATACCGATAATACGGTGTACCAGGTAAACCCCTCCATTTCTTTCGTTCTAAAACCCTCGAGAATTCCCATTTGTAGTTCACTTTTCTGAACGAAAATATTCCAATTTAATTCATTTTTCTCACAAATATTTGATTGATTTTGTTTGAAACAGAAAAAGAAAATGGTGGTGAGAATTCGATTATCTAGATTTGGGTGTAAAAATAAGCCCTTTTATAGGGTTATGGCGGCTGATAGCAGATCTCCAAGAGATGGCAAACATATTGAAGTTCTTGGTTACTATAACCCTCTTCCAGGTTTCTCCTATTTCCCCATTTTCCCTATTTTCAAACTTTAAATCTTGGATTTTGGATTCTGAATTATTTGATGTATGCAGGTCAGGATGGGCAGAAGCGAATGGGGCTTAATTTTGATAGAGTGAAGTAAGTGACTATGCAATTCAATTTGTTTTCTTCATAATTGGTTTCGTTATTGGTTTTAAACTAATCTTACACACTTCTGCAAAAATCGTCTGTGTGTTGTGTGAGATGAATTTGGTAAGTCATACTGTATTTCAATATTTGTATAGAGTGTCAGCGTTAACTTGCAAATGACAGTGTAGCTATTAGACAGAAACTAAATAAGGTTCGACCTTAGTATGAGCTTAGGGCATGTTTGGTATAAATTTAAGGAAATGGAATTAGGGCATGTTTGGTATACTTTAGGAAACAAATCACTTGTAATGGTTAACCTTAGCAAGTGGATTGTGTTACCATGTCTCTCATGCCAAACATTTGGTAATGGAAATAGTTAAGTGATTCCATTTCCATCACTTAAAACTCTATACCAGACATGCTATTAAGGTGATCATTCTTGTTGATAAGGTAGATGAAGTGAACTTTTGAGGGTGTTTGAAGGTAATGAGTTTGGGTTTATAGAGAGGGTTGTTTGCCTTTATACGAGCTTTTAACAGTGGAAGTATTTGGCCTTTGAATTGGGATTGTTGCTACTTCTCGCCAATAGTTGTTCTAAGCCAGGGAAGTTTTTCCATTGTTATGTATACAAGGCCTTAATTATGTGTTGATAGAAACTAGTGTTCTTGTATTATCTGATTGGATGGCAAGACTAGTGTGCAAGCTATGGATTGGCAAGAAGGATTCATCATTCAGTTCATATTCACTGTTTATTTATGCACTTAGGGGTATGAACTTTGGAAAACAGTGATGTGCATGCCCAGCTATTCAGTTGATTGGTTATGCAGAGATATTATATCTGAGACGTTTCGGTAAGCGACATAAGATTGAGGGCCTGGATTGAGTTGAAAACTCCAATTGGGAAGCTAGTATGCTGCAATACACATTTTGTAAGTGGTGTTTGTCACGATGAAGTAATACCTTTAGCTGCAAATTGCTTACCTGGACAGAATTTATGCAGCCTAGGCAGGACATTTGTTTGTATAATATACTCTCCAGAGTCTCTCCACAATCTAATCACAGTGTATCAAATGTTTCACGTACTTTTTCTCTATTCAATTCCTTATTTATCTTCTTCTTTAACCTATTATGTAGATTCACGTGATGAAGTGTTTTAGTCTCAAGTCATATGCTTGTTGATTTTGTTAGAAGCTTTATATTCATTGTCGGTTTCTTTATTATGTTCCTGCTCAAAGCTTTAGCTTCGTCTATGAACAAGTTCTGTCAAGTGACTTGTTATACTCATCTTGTTTCCTGTATATGTCCCTTAAAGGTTTTGAGTAACATTTGAGTACAGGGCTCCACCTTTGACTTCAGACCCATATTCGCCTCAAGGAGCCTATTTAATTTCACTGGTCACACACATGAGATCTTAGGGGTAGCTGGTGAAGCTCATATAGAAACAAGACAGTAGCTTCAAGTTGTCCTATACCTCTGAGTAGCGTTGATGATCCAACACCCGACATTTGACCTCAGACCCATGCTCAAGAAACCCCTTTGTTATGTACTTGTATGTGGTAACTCTTTGAATAAAAATATAGAGGGAAGAGCTTCTGCCTTCTAAGCTGGTTCTAGGGTCCATGCGGTCCATTTAAATTAGTTTTGGCGTAGGATAAAAATAAGGAAGTGCATTTAAAAGATAAACTCACACCTGTTAAAAAATTGTAAATGACTACGGCAAATCTTTTAAGGAGTTGGAGGGAAGCCTTCTTTGACTGTCCAGTGGCCTTTGGAAGTTCCACATTAAAGGTTCAAGGTCATGCTTAGGAGACTTCTTTGGAAAATTCTTGGAAAATCAAGGTAATTGAGGGAGTTTCCTTGGCTCTTGAGCTGTTCACATGGAATCTGTAATCCATGGAGTTGCATATATCATCTGAATCAGGGAACTAAAATTGTTGACAAGAACCTAATTTTGAAGACGAACTCATGCCTGCGGAATTCTTTGGTCGAATAATATTTTTATTTCACCAAAAACTCAGAGTGAAACCACTTGGGTGTTAGAAAGTTTATCTGCAACTCCACACGTCTTGTTCATCCACCCAATGACACTACATTAGCACTACCACCCAACAACAGTGTAAATTCTGGTATGTAGTTTCATATTCTGCAACAATCATAATGTTTTGTTATGACAAGCTAAGTTTGTAAATTTTGGCATGTAGTTTCATGATCTGCAACTATCCCAATTTTCAATAAATGTATGCCTCTCCAGTTCTTCCACAGTGTCACTTACCTTGGAATTTCACATGAAATGCAATTATTACCTAATCCCACTCTTCCCCACCCACCCCCAAACATCTTACCATCCTTTTAGGTCCTATTCTGCTCATCTTATTTCACTTATTTCAGTACTAATAAGCTCAATAAGTTCATATAAGGGTTACCCAAGTTCAATTTACAACTAAACTAAGTTCTACTAACTTTTTTTAACAAGTTCATAAGTGCGTTTAAGTTTAGATAAGTGAAAATCAAGTAAATAAATAGAAGACACCCTTACTCCTCTCTTGGAGAATTTTCCTATATCTTTGCAAATTCCTTTATTTCCACTATTTTTTCTAATTCAGCATTTATTGAAATCTTCATGTAGGGTTCAATAATTTCATAATGCTAAATTATGAGATTTCTCCTACCATTGCTGCATTTACATGGTTGTTTTTCTCATGTTTGTCGTTTATACTCAAGTTCATTATCATTAATTTGTTTGCTAGAATTTCTATAGCAGATGTTGGTTATTGTTATTCTGTTTTTCATTTCTTTTTGTTCTTCTTTCTTCTAGAATTTTATCATTAGTGGGGTTCTGTGTAGTTGTTTACAGGATGTATTACCAACTTTTTTTTTGCGTTTTCGTATTATGTTTGCATAAGTTACACGTTACACTAGTTCGTCTCTTAAAAAAAAATACACTAGTTGATCCAGTTTGCTTTGGGGAAAGTAATTTACCAATTTGATATCAAATTATGAGAAAGACTACAAGAATGAGTATCTTTCTCGTATTTTCCGGCGGGGAGTGGAAAAGCAAGCTCAAATTGGATCACTAGTTGATAAATCACGAAGGTGGTCGTATTCCACATATAAGACCTCCCTTTGTTCTCCCAGTTATGCGGAATTTTTTTCTTTTTTACTGGTCAGCTTTTTTATTCAGAAAACCTTTGTTATCTTTGCTTGTAAAAGTCAAAATCACCTCAATGCTTCTACAGAGCCTCCAATCTTAGGTGTTTTGAGGAGGTTTAGATGCTTTCAGCCTTACCCTACGACGATTGAGAGGCTGTTTCCAACCAACCTTGAATGCTTGTGCTCTCATATAATGTTGTAATTGCTAGCAATTTCTGCAACCAGATGATTGGGAGATGGTACCATGTGACAGGGTCTGGCAAATGCTACTTTACCATAGGTTGGCTTGGATCACTTCAATTTTAGCAAAATGTCTAGTAGGTATGCGATGAATAGAGAGATTCAAAAGTCATTGGTACTTGGTAGCACTAGATATTGAGGGTTGAGGGGTGGGTTTTCTCACTTGGTTAGTGGAGTATCTCAAGAATTTCGCGCATGAACTGTCTCTCGATTCTGTCGTGACATGCTCTGTTGATAGCAGATATAGCAGATATAGCAGATATTGAGGGTTGAGTGGTGGGTTTTCTGACTGGGGTTAGTGGAGTATCTCAGGAATTTCGCTCAAGAACTGTCTCTCGATTCTGTCATGACACGCTCTGTTGATAGCTGCATATCCTCCTTTTTGCATGAGTTTGATTTCTTGTTCCTGCAAAAGGTTTTCTTTAGAGCTGCATGTAACTTCCATGGATCTTCATTCATCCCTTATTTTTGAATATTTAAAATAATTAACTTTCACATTCCCTTTTAGATTTATTCATTTTTCTTCTTTGTTCGACCACTGTAAGTTGATATATGTTGCTGGTTTTTTATATAAGCATTCAGGAATTTCATGATCATTTGGTTCTTTGGTCTTGATTGCAATGTATACTTTAGTAGAGCAGGATGTATGTCTAGCCGTAATCTAAGCTGCTTTGGTATTGTGCTCTGATATATAATGGCAAATAGGAATCTGTTATTGGGGGACATAGGTGTATGAACAACTATGTAAAGCATTTTTTCTCTTCTTATGTGATTCAGAAATGATTCTTAGGTTCCATTTGATTCGACACAAAACACTTTCCTGGAAAAAAGATTTTCCCATTTCCCTTTGTTGTTTTGTTAAGGGGTGGAATTTTTTTTCCAAATGTGGAAAACAACTTTTTCGAAGGTGGAAAACAACTTTCCCAATGTGGAAGACATTTTCCTTTTGTAAAGAAGGATTGCCATATTTTCCTCCCTAACGTCCTTACTTCCTTACATTTCTTGTTATATCCTCCCATCCATCGTCTCCTTTCTACCTCCATTTTGTTTTTCTCCATACTTTTTCTTGTAACAAAACAAACAAAGGAAAACTATTTAACCATTGTGTTTTCTCTTAAAAATTATTCTCCATTGAAAATGTTTTCCGTTGAAACAAAGGAGCCTTAAATGGATAGATTCTTCTGTGGGAAATCAGGAACTTTGTATTCTGGATTAAAATGTTGAACGGTTTGGTGATGAATTTCGGCTTCTAGTTGCTAGATAGGCCTCATTTTTTATTTTGTTTTTGCTTCAAACGGTGATTTGTGTCCCCCGTTATATTTTTGCCATTAGTCCAGCACAAATTTCTACTGCAACTTTTTTTTTTTCACTTTGTATGCTGGATACTTGGATGGATTTTCTTACCTCTCCCAAATTATGGACAATACTGTGTCTCTGGTTCAATGTACCATCTTGCATAGTGACAAGAGTGGCCAGAAGATGCTATTGTTTCCTGCTTTGATGTCCACAAAGTCTTCAAAGGAGCTGTATCAGCTAATTATTTGGTTGTTCTATTTTGGGCTTCTCTTTTCGTAAGCTGCACGCAACGCCAACCTTTAATCAGACCAAGTTAAGGTCAATCTTTTGCTAAAGATAGTTGTGGGCCAGGGCGAGCCCATGCCAAGCCCACTCTGCATCGGGTCGGGCTGGGTCAAAATTTTCAAAACAGGGCCCATCCGTCGTGCCTAAGCCTAATTTTGCTCAATTTAACGTGCTTTGTTGTATCGGGTCGAGTCGTGCCGTGCTTTGTCGTGCTTTTTCCAAAAAAAAAGCGGCCCCGACCCACGACTTCATGCTAGTGCCGAGCCGGGCTTTTTTCATAGCCCGGCCTGGCACACAAGCATCTTTAGTATTAGCCATTGGGCTTTTCCAGGATGAGGGGCTTGTGGGGAGTTTGAGCTTCGTTGCTATGAGTTGTTTTATTTGTATATTGTTTGAATGAGCTACCCGTAGGGATGACTGTAGATACTATGATGCATAGAGCTGGACAGAATGTTTGCACTTGATTTTACAAATTATTTTGTCTGTGACTTGAGATTCTGAGAGTTGTGTTTTGACAGCCTATTACTGTCCCTTAATTATGTCTCTTAACCTGCAATACAGGTATTGGCTTTCAGTTGGAGCCCAACCATCAGATCCAGTTCAACGAGTTCTGTTTAGATCCGGGTTACTCCCTCCTCCACCGATGATGGCAATGGGACGAAAAGGTGGGGCACGTGATACCCGGTCTGTTGATGCCATGACTGGACGTATTTTGTCTCCTGGAAAGCCTAGCAGTTCAGAAGACACTGACAATCCCAACATCGAGGATGCAGAAATAGTGGATACCACAACCACTTCATGA

mRNA sequence

ATGCGGGCCGCGACCACGACACAGCAGCAGCGCGGCCTACGGCCCACTGGATGTGCGTGTCCGTGTGTTTTGGCTTGCGGGCTTGCTAGCCGGCCTTGCCTCTTGGCTTGCCTTGCGCCTGTTATTGTGGTTCGTCTTCTTCCGCAGGCTCTCAAGAAAAAACGTTTAGTTCATACCGATAATACGGTGTACCAGAAAAAGAAAATGGTGGTGAGAATTCGATTATCTAGATTTGGGTGTAAAAATAAGCCCTTTTATAGGGTTATGGCGGCTGATAGCAGATCTCCAAGAGATGGCAAACATATTGAAGTTCTTGGTTACTATAACCCTCTTCCAGGTCAGGATGGGCAGAAGCGAATGGGGCTTAATTTTGATAGAGTGAAGTATTGGCTTTCAGTTGGAGCCCAACCATCAGATCCAGTTCAACGAGTTCTGTTTAGATCCGGGTTACTCCCTCCTCCACCGATGATGGCAATGGGACGAAAAGGTGGGGCACGTGATACCCGGTCTGTTGATGCCATGACTGGACGTATTTTGTCTCCTGGAAAGCCTAGCAGTTCAGAAGACACTGACAATCCCAACATCGAGGATGCAGAAATAGTGGATACCACAACCACTTCATGA

Coding sequence (CDS)

ATGCGGGCCGCGACCACGACACAGCAGCAGCGCGGCCTACGGCCCACTGGATGTGCGTGTCCGTGTGTTTTGGCTTGCGGGCTTGCTAGCCGGCCTTGCCTCTTGGCTTGCCTTGCGCCTGTTATTGTGGTTCGTCTTCTTCCGCAGGCTCTCAAGAAAAAACGTTTAGTTCATACCGATAATACGGTGTACCAGAAAAAGAAAATGGTGGTGAGAATTCGATTATCTAGATTTGGGTGTAAAAATAAGCCCTTTTATAGGGTTATGGCGGCTGATAGCAGATCTCCAAGAGATGGCAAACATATTGAAGTTCTTGGTTACTATAACCCTCTTCCAGGTCAGGATGGGCAGAAGCGAATGGGGCTTAATTTTGATAGAGTGAAGTATTGGCTTTCAGTTGGAGCCCAACCATCAGATCCAGTTCAACGAGTTCTGTTTAGATCCGGGTTACTCCCTCCTCCACCGATGATGGCAATGGGACGAAAAGGTGGGGCACGTGATACCCGGTCTGTTGATGCCATGACTGGACGTATTTTGTCTCCTGGAAAGCCTAGCAGTTCAGAAGACACTGACAATCCCAACATCGAGGATGCAGAAATAGTGGATACCACAACCACTTCATGA

Protein sequence

MRAATTTQQQRGLRPTGCACPCVLACGLASRPCLLACLAPVIVVRLLPQALKKKRLVHTDNTVYQKKKMVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVKYWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGKPSSSEDTDNPNIEDAEIVDTTTTS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02098.1Spo02098.1mRNA


Homology
[Close]
BLAST of Spo02098.1 vs. NCBI nr
Match: gi|902162854|gb|KNA06743.1| (hypothetical protein SOVF_178180, partial [Spinacia oleracea])

HSP 1 Score: 339.7 bits (870), Expect = 3.500e-90
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 38  LAPVIVVRLLPQALKKKRLVHTDNTVYQKKKMVVRIRLSRFGCKNKPFYRVMAADSRSPR 97
           LAPVIVVRLLPQALKKKRLVHTDNTVYQKKKMVVRIRLSRFGCKNKPFYRVMAADSRSPR
Sbjct: 1   LAPVIVVRLLPQALKKKRLVHTDNTVYQKKKMVVRIRLSRFGCKNKPFYRVMAADSRSPR 60

Query: 98  DGKHIEVLGYYNPLPGQDGQKRMGLNFDRVKYWLSVGAQPSDPVQRVLFRSGLLPPPPMM 157
           DGKHIEVLGYYNPLPGQDGQKRMGLNFDRVKYWLSVGAQPSDPVQRVLFRSGLLPPPPMM
Sbjct: 61  DGKHIEVLGYYNPLPGQDGQKRMGLNFDRVKYWLSVGAQPSDPVQRVLFRSGLLPPPPMM 120

Query: 158 AMGRKGGARDTRSVDAMTGRILSPGKPSSSEDTDNPNIEDAEIVDTTTTS 208
           AMGRKGGARDTRSVDAMTGRILSPGKPSSSEDTDNPNIEDAEIVDTTTTS
Sbjct: 121 AMGRKGGARDTRSVDAMTGRILSPGKPSSSEDTDNPNIEDAEIVDTTTTS 170
[Close]
BLAST of Spo02098.1 vs. NCBI nr
Match: gi|731337893|ref|XP_010680033.1| (PREDICTED: 37S ribosomal protein S16, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 263.5 bits (672), Expect = 3.200e-67
Identity = 125/139 (89.93%), Postives = 133/139 (95.68%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           MVVR+RLSRFGCKNKPFYRVMAA SRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDR+K
Sbjct: 1   MVVRLRLSRFGCKNKPFYRVMAASSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRMK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGKPSSSE 188
           YWLSVGAQPSDPVQR+LFR+GLLPPPPMMAMGRKGGARDTR VD MTGR+L+PGKPSSSE
Sbjct: 61  YWLSVGAQPSDPVQRILFRAGLLPPPPMMAMGRKGGARDTRPVDPMTGRVLTPGKPSSSE 120

Query: 189 DTDNPNIEDAEIVDTTTTS 208
            +DNPNIED EIVDT T+S
Sbjct: 121 SSDNPNIEDVEIVDTATSS 139
[Close]
BLAST of Spo02098.1 vs. NCBI nr
Match: gi|629117420|gb|KCW82095.1| (hypothetical protein EUGRSUZ_C03473 [Eucalyptus grandis])

HSP 1 Score: 224.6 bits (571), Expect = 1.600e-55
Identity = 106/132 (80.30%), Postives = 116/132 (87.88%), Query Frame = 1 

		  

Query: 67  KKMVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDR 126
           KKMVVRIRL+RFGCKN+PFYRVMAADSRSPRDGKH+EVLGYYNPLPGQDG KRMGL FDR
Sbjct: 87  KKMVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLKFDR 146

Query: 127 VKYWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGKPSS 186
           VKYWLSVGAQPSDPVQR+LFR+GLLPPPPM+AMGRKGG RDTR VD +TGR++SP K + 
Sbjct: 147 VKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPLTGRVISPEKQAV 206

Query: 187 SEDTDNPNIEDA 199
               D    EDA
Sbjct: 207 PSKADESTPEDA 218
[Close]
BLAST of Spo02098.1 vs. NCBI nr
Match: gi|743848592|ref|XP_011028272.1| (PREDICTED: 28S ribosomal protein S16, mitochondrial [Populus euphratica])

HSP 1 Score: 224.6 bits (571), Expect = 1.600e-55
Identity = 112/138 (81.16%), Postives = 119/138 (86.23%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           MVVRIRLSRFGC NKPFYRVMAADSRSPRDGKH+EVLGYYNPLPGQDG KRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGK-PSSS 188
           YWLSVGAQPS+PVQR+LFR+GLLPPPPMM MGRKGG RDTR VD MTGR LSP K PSSS
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 189 EDTDNPNIEDAEIVDTTT 206
           +   + N  D E   TTT
Sbjct: 121 QSNASKN--DTEAATTTT 136
[Close]
BLAST of Spo02098.1 vs. NCBI nr
Match: gi|694323190|ref|XP_009352675.1| (PREDICTED: 37S ribosomal protein S16, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 223.8 bits (569), Expect = 2.800e-55
Identity = 103/121 (85.12%), Postives = 115/121 (95.04%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           MVVRIRL+RFGCKN+PFYRVMAADSRSPRDGKH+EVLGYYNPLPGQDG KRMGLNF+RVK
Sbjct: 1   MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGKPSSSE 188
           YWLSVGAQPSDPVQR+LFR+GLLPPPPM+AMGRKGG RDTR VDAM+GR ++P KP++S 
Sbjct: 61  YWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDAMSGRFVTPEKPAASG 120

Query: 189 D 190
           D
Sbjct: 121 D 121
[Close]
BLAST of Spo02098.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJ74_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_178180 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.400e-90
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 38  LAPVIVVRLLPQALKKKRLVHTDNTVYQKKKMVVRIRLSRFGCKNKPFYRVMAADSRSPR 97
           LAPVIVVRLLPQALKKKRLVHTDNTVYQKKKMVVRIRLSRFGCKNKPFYRVMAADSRSPR
Sbjct: 1   LAPVIVVRLLPQALKKKRLVHTDNTVYQKKKMVVRIRLSRFGCKNKPFYRVMAADSRSPR 60

Query: 98  DGKHIEVLGYYNPLPGQDGQKRMGLNFDRVKYWLSVGAQPSDPVQRVLFRSGLLPPPPMM 157
           DGKHIEVLGYYNPLPGQDGQKRMGLNFDRVKYWLSVGAQPSDPVQRVLFRSGLLPPPPMM
Sbjct: 61  DGKHIEVLGYYNPLPGQDGQKRMGLNFDRVKYWLSVGAQPSDPVQRVLFRSGLLPPPPMM 120

Query: 158 AMGRKGGARDTRSVDAMTGRILSPGKPSSSEDTDNPNIEDAEIVDTTTTS 208
           AMGRKGGARDTRSVDAMTGRILSPGKPSSSEDTDNPNIEDAEIVDTTTTS
Sbjct: 121 AMGRKGGARDTRSVDAMTGRILSPGKPSSSEDTDNPNIEDAEIVDTTTTS 170
[Close]
BLAST of Spo02098.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCM1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g131530 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.200e-67
Identity = 125/139 (89.93%), Postives = 133/139 (95.68%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           MVVR+RLSRFGCKNKPFYRVMAA SRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDR+K
Sbjct: 1   MVVRLRLSRFGCKNKPFYRVMAASSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRMK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGKPSSSE 188
           YWLSVGAQPSDPVQR+LFR+GLLPPPPMMAMGRKGGARDTR VD MTGR+L+PGKPSSSE
Sbjct: 61  YWLSVGAQPSDPVQRILFRAGLLPPPPMMAMGRKGGARDTRPVDPMTGRVLTPGKPSSSE 120

Query: 189 DTDNPNIEDAEIVDTTTTS 208
            +DNPNIED EIVDT T+S
Sbjct: 121 SSDNPNIEDVEIVDTATSS 139
[Close]
BLAST of Spo02098.1 vs. UniProtKB/TrEMBL
Match: B3IWG4_POPAL (30S ribosomal protein S16 OS=Populus alba GN=rps16-1 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.100e-55
Identity = 112/138 (81.16%), Postives = 119/138 (86.23%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           MVVRIRLSRFGC NKPFYRVMAADSRSPRDGKH+EVLGYYNPLPGQDG KRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGK-PSSS 188
           YWLSVGAQPS+PVQR+LFR+GLLPPPPMM MGRKGG RDTR VD MTGR LSP K PSSS
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 189 EDTDNPNIEDAEIVDTTT 206
           +   + N  D E   TTT
Sbjct: 121 QSNASKN--DTEAATTTT 136
[Close]
BLAST of Spo02098.1 vs. UniProtKB/TrEMBL
Match: A0A059CVX1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03473 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.100e-55
Identity = 106/132 (80.30%), Postives = 116/132 (87.88%), Query Frame = 1 

		  

Query: 67  KKMVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDR 126
           KKMVVRIRL+RFGCKN+PFYRVMAADSRSPRDGKH+EVLGYYNPLPGQDG KRMGL FDR
Sbjct: 87  KKMVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLKFDR 146

Query: 127 VKYWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGKPSS 186
           VKYWLSVGAQPSDPVQR+LFR+GLLPPPPM+AMGRKGG RDTR VD +TGR++SP K + 
Sbjct: 147 VKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPLTGRVISPEKQAV 206

Query: 187 SEDTDNPNIEDA 199
               D    EDA
Sbjct: 207 PSKADESTPEDA 218
[Close]
BLAST of Spo02098.1 vs. UniProtKB/TrEMBL
Match: B9N881_POPTR (Ribosomal protein S16 OS=Populus trichocarpa GN=POPTR_0004s22700g PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.600e-55
Identity = 111/138 (80.43%), Postives = 119/138 (86.23%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           MVVRIRLSRFGC NKPFYRVMAADSRSPRDGKH+EVLGYYNPLPGQDG KRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGK-PSSS 188
           YWLSVGAQPS+PVQR+LFR+G+LPPPPMM MGRKGG RDTR VD MTGR LSP K PSSS
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 189 EDTDNPNIEDAEIVDTTT 206
           +   + N  D E   TTT
Sbjct: 121 QSNASKN--DTEAATTTT 136
[Close]
BLAST of Spo02098.1 vs. ExPASy Swiss-Prot
Match: RS16_ROSDO (30S ribosomal protein S16 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rpsP PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.800e-20
Identity = 45/82 (54.88%), Postives = 63/82 (76.83%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           M ++IRL+R G K +PFYR++AADSR PRDG+ IE LG YNPL  +D ++R+ ++ +RV+
Sbjct: 1   MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDAERVQ 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGL 151
           YWL  GAQP+D V R+L  +GL
Sbjct: 61  YWLGQGAQPTDRVARMLEAAGL 82
[Close]
BLAST of Spo02098.1 vs. ExPASy Swiss-Prot
Match: RS16_SPHWW (30S ribosomal protein S16 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rpsP PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.500e-20
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           M V IRL+R G K +P+YR++ AD+RSPRDG  IE +G YNPL  +D  KR+ L+ DR K
Sbjct: 1   MAVSIRLARGGAKKRPYYRIVVADARSPRDGAFIEKIGAYNPLLAKDDPKRVVLDTDRAK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGL 151
           +WLSVGAQP+D V R L  +G+
Sbjct: 61  HWLSVGAQPTDRVARFLDAAGV 82
[Close]
BLAST of Spo02098.1 vs. ExPASy Swiss-Prot
Match: RS16_DINSH (30S ribosomal protein S16 OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) GN=rpsP PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.100e-19
Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           M ++IRL+R G K +PFYR++AADSR PRDG+ IE LG YNPL  +D + R+ ++ +RV+
Sbjct: 1   MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEDRVKMDLERVQ 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLLP 153
           YWL  GA+P+D V R+L  + +LP
Sbjct: 61  YWLGEGAKPTDRVARMLEAAEVLP 84
[Close]
BLAST of Spo02098.1 vs. ExPASy Swiss-Prot
Match: RS16_RHORT (30S ribosomal protein S16 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=rpsP PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.100e-19
Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           M +RIRL+R G K +PFYR++ ADSRSPRDG+ IE LG ++P+  +D ++R+ L  +RVK
Sbjct: 1   MSLRIRLARGGAKKRPFYRIVVADSRSPRDGRFIEKLGTFDPMLPRDHERRVVLKDERVK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGL 151
           YWL VGA PSD V R L  SGL
Sbjct: 61  YWLGVGALPSDRVARFLGLSGL 82
[Close]
BLAST of Spo02098.1 vs. ExPASy Swiss-Prot
Match: RS16_ZYMMO (30S ribosomal protein S16 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=rpsP PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.100e-19
Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           M V IRLSR G K +PFYR++ A+SRSPRDG  IE +G YNP   +D + R+ ++ DR +
Sbjct: 1   MAVSIRLSRGGAKRRPFYRIVIANSRSPRDGSFIEKIGSYNPQLPKDNENRVIVDLDRAR 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLL 152
           +WLSVGAQP+D V R L  +GLL
Sbjct: 61  HWLSVGAQPTDRVARFLDAAGLL 83
[Close]
BLAST of Spo02098.1 vs. TAIR (Arabidopsis)
Match: AT5G56940.1 (Ribosomal protein S16 family protein)

HSP 1 Score: 216.1 bits (549), Expect = 2.100e-56
Identity = 102/131 (77.86%), Postives = 114/131 (87.02%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           MVVRIRLSRFGCKN+PF+RVMAADSRSPRDGKH+EVLGY+NPLPGQDG KRMGL FDR+K
Sbjct: 1   MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDTRSVDAMTGRILSPGKPSSSE 188
           YWLSVGAQPSDPVQR+LFRSGLLPPPPM+AMGRKGGARDTR VD MTGR +     + + 
Sbjct: 61  YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNA 120

Query: 189 DTDNPNIEDAE 200
           + + P  ED E
Sbjct: 121 NDNQPKEEDTE 131
[Close]
BLAST of Spo02098.1 vs. TAIR (Arabidopsis)
Match: AT4G34620.1 (small subunit ribosomal protein 16)

HSP 1 Score: 143.7 bits (361), Expect = 1.300e-34
Identity = 65/113 (57.52%), Postives = 88/113 (77.88%), Query Frame = 1 

		  

Query: 69  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVK 128
           M V+IRL+R GCK++PFYRV+ AD +S RDGK IEVLG+Y+PL G++   R+ L FDR+K
Sbjct: 1   MTVKIRLARLGCKHRPFYRVVVADEKSRRDGKQIEVLGFYDPLQGKEDADRVSLKFDRIK 60

Query: 129 YWLSVGAQPSDPVQRVLFRSGLLPPPPMMAMGRKGGARDT-RSVDAMTGRILS 181
           YWLSVGAQP+D V+ +LFR+GL+PP PM+ +G K G + T + V  +TG IL+
Sbjct: 61  YWLSVGAQPTDTVESMLFRAGLIPPKPMVVVGSKNGQKSTSQHVSPITGEILN 113
[Close]
BLAST of Spo02098.1 vs. TAIR (Arabidopsis)
Match: ATCG00050.1 (ribosomal protein S16)

HSP 1 Score: 52.4 bits (124), Expect = 3.900e-7
Identity = 25/81 (30.86%), Postives = 45/81 (55.56%), Query Frame = 1 

		  

Query: 70  VVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHIEVLGYYNPLPGQDGQKRMGLNFDRVKY 129
           +V++RL R G K +  YR++A D R  R+G+ +  +G+Y+P+  Q       LN   +  
Sbjct: 1   MVKLRLKRCGRKQRAVYRILAIDVRYRREGRDLSKVGFYDPITNQ-----TFLNLSAILD 60

Query: 130 WLSVGAQPSDPVQRVLFRSGL 151
           +L  GAQP+     +  ++G+
Sbjct: 61  FLKKGAQPTRTAHDISKKAGI 76
The following BLAST results are available for this feature:
BLAST of Spo02098.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902162854|gb|KNA06743.1|3.5e-90100.hypothetical protein SOVF_1781... [more]
gi|731337893|ref|XP_010680033.1|3.2e-6789.9PREDICTED: 37S ribosomal prote... [more]
gi|629117420|gb|KCW82095.1|1.6e-5580.3hypothetical protein EUGRSUZ_C... [more]
gi|743848592|ref|XP_011028272.1|1.6e-5581.1PREDICTED: 28S ribosomal prote... [more]
gi|694323190|ref|XP_009352675.1|2.8e-5585.1PREDICTED: 37S ribosomal prote... [more]
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BLAST of Spo02098.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QJ74_SPIOL2.4e-90100.Uncharacterized protein (Fragm... [more]
A0A0J8CCM1_BETVU2.2e-6789.9Uncharacterized protein OS=Bet... [more]
B3IWG4_POPAL1.1e-5581.130S ribosomal protein S16 OS=P... [more]
A0A059CVX1_EUCGR1.1e-5580.3Uncharacterized protein OS=Euc... [more]
B9N881_POPTR2.6e-5580.4Ribosomal protein S16 OS=Popul... [more]
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BLAST of Spo02098.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RS16_ROSDO3.8e-2054.830S ribosomal protein S16 OS=R... [more]
RS16_SPHWW6.5e-2056.130S ribosomal protein S16 OS=S... [more]
RS16_DINSH1.1e-1952.330S ribosomal protein S16 OS=D... [more]
RS16_RHORT1.1e-1957.330S ribosomal protein S16 OS=R... [more]
RS16_ZYMMO1.1e-1955.430S ribosomal protein S16 OS=Z... [more]
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BLAST of Spo02098.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G56940.12.1e-5677.8Ribosomal protein S16 family p... [more]
AT4G34620.11.3e-3457.5small subunit ribosomal protei... [more]
ATCG00050.13.9e-730.8ribosomal protein S16[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16HAMAPMF_00385Ribosomal_S16coord: 70..148
score: 23
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 70..203
score: 4.6
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 77..138
score: 2.4
IPR000307Ribosomal protein S16TIGRFAMsTIGR00002TIGR00002coord: 71..150
score: 8.2
IPR023803Ribosomal protein S16 domainGENE3D3.30.1320.10coord: 70..156
score: 1.1
IPR023803Ribosomal protein S16 domainunknownSSF54565Ribosomal protein S16coord: 71..162
score: 7.59
NoneNo IPR availablePANTHERPTHR12919:SF2028S RIBOSOMAL PROTEIN S16, MITOCHONDRIALcoord: 70..203
score: 4.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051607 defense response to virus
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0048481 plant ovule development
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006412 translation
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016787 hydrolase activity
RNA-Seq Expression