Spo02168 (gene)

Overview
NameSpo02168
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionFRIGIDA-like protein
Locationchr5 : 4234595 .. 4235092 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGCTGGAAGCCCATTTTCACGGCCTGGAAAAGTCACTAAAAAGGCGTTTTCATGAGTTGGAAGACCAGGAAAAGGAATATGAAATCAAAACAATGGAAGCACAAGAGATACTAGAGAAGCGTAAAGCAGCTGTTGTGGCGAAGGAGGAGGCTTCTTTAGAGAAGCTTCAGGAGAAAAAGGATGCTGCTGTGTTTGCTATTTCAACTGCTAAAGAGAAGCAATGGAGGGTATTGTGTGAAGAATATTCTGAAGCCACCAGTGAGAGTCCGGGTGGAACCATGGAGGAAACACCAACTAATTCTATAGTATCTGTGATTACTTCTGAATACTCAAGTGGAACAGCTGAAGATGGAAGTCCAGAAGTGCAGTCAGCTGATAATGGAAATGGAGAGGTGGCATCTTATCCCGAGCTCATCAAACTATGTGAAGAGATGGATGCTGAGGGTCTTCATAATTTCATTCTGACAACCGCAAGAACCTTGCTTCAATGA

mRNA sequence

ATGGAAGAGCTGGAAGCCCATTTTCACGGCCTGGAAAAGTCACTAAAAAGGCGTTTTCATGAGTTGGAAGACCAGGAAAAGGAATATGAAATCAAAACAATGGAAGCACAAGAGATACTAGAGAAGCGTAAAGCAGCTGTTGTGGCGAAGGAGGAGGCTTCTTTAGAGAAGCTTCAGGAGAAAAAGGATGCTGCTGTGTTTGCTATTTCAACTGCTAAAGAGAAGCAATGGAGGGTATTGTGTGAAGAATATTCTGAAGCCACCAGTGAGAGTCCGGGTGGAACCATGGAGGAAACACCAACTAATTCTATAGTATCTGTGATTACTTCTGAATACTCAAGTGGAACAGCTGAAGATGGAAGTCCAGAAGTGCAGTCAGCTGATAATGGAAATGGAGAGGTGGCATCTTATCCCGAGCTCATCAAACTATGTGAAGAGATGGATGCTGAGGGTCTTCATAATTTCATTCTGACAACCGCAAGAACCTTGCTTCAATGA

Coding sequence (CDS)

ATGGAAGAGCTGGAAGCCCATTTTCACGGCCTGGAAAAGTCACTAAAAAGGCGTTTTCATGAGTTGGAAGACCAGGAAAAGGAATATGAAATCAAAACAATGGAAGCACAAGAGATACTAGAGAAGCGTAAAGCAGCTGTTGTGGCGAAGGAGGAGGCTTCTTTAGAGAAGCTTCAGGAGAAAAAGGATGCTGCTGTGTTTGCTATTTCAACTGCTAAAGAGAAGCAATGGAGGGTATTGTGTGAAGAATATTCTGAAGCCACCAGTGAGAGTCCGGGTGGAACCATGGAGGAAACACCAACTAATTCTATAGTATCTGTGATTACTTCTGAATACTCAAGTGGAACAGCTGAAGATGGAAGTCCAGAAGTGCAGTCAGCTGATAATGGAAATGGAGAGGTGGCATCTTATCCCGAGCTCATCAAACTATGTGAAGAGATGGATGCTGAGGGTCTTCATAATTTCATTCTGACAACCGCAAGAACCTTGCTTCAATGA

Protein sequence

MEELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEKKDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDGSPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTLLQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02168.1Spo02168.1mRNA


Homology
[Close]
BLAST of Spo02168.1 vs. NCBI nr
Match: gi|902222848|gb|KNA19304.1| (hypothetical protein SOVF_062870 [Spinacia oleracea])

HSP 1 Score: 307.0 bits (785), Expect = 2.000e-80
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 

		  

Query: 1   MEELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQE 60
           MEELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQE
Sbjct: 1   MEELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQE 60

Query: 61  KKDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDG 120
           KKDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDG
Sbjct: 61  KKDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDG 120

Query: 121 SPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTLLQ 166
           SPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTLLQ
Sbjct: 121 SPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTLLQ 165
[Close]
BLAST of Spo02168.1 vs. NCBI nr
Match: gi|731335964|ref|XP_010679002.1| (PREDICTED: FRIGIDA-like protein 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 242.7 bits (618), Expect = 4.600e-61
Identity = 130/162 (80.25%), Postives = 144/162 (88.89%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELEAHFHGLEKSLKRRFHELEDQEKEYE KT+EAQE++EKRKAAVVAKE+ASLEKLQEK
Sbjct: 41  KELEAHFHGLEKSLKRRFHELEDQEKEYESKTVEAQEMIEKRKAAVVAKEQASLEKLQEK 100

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDGS 121
           +DAAVFAI+ A+EK  RV CEEYS   SES  GTMEETPTNS++S ITS+Y+SGT EDGS
Sbjct: 101 RDAAVFAIAIAREKHRRVSCEEYSVDNSESQSGTMEETPTNSMISEITSDYTSGTVEDGS 160

Query: 122 PEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
            EVQSADNGNGEVASYPEL+KLCEEMDAEGLHNFI    + L
Sbjct: 161 SEVQSADNGNGEVASYPELVKLCEEMDAEGLHNFISDNRKNL 202
[Close]
BLAST of Spo02168.1 vs. NCBI nr
Match: gi|667713665|gb|AIG88464.1| (FRIGIDA-like protein, partial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 241.1 bits (614), Expect = 1.400e-60
Identity = 129/162 (79.63%), Postives = 143/162 (88.27%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELEAHFHGLEKSLKRRFHELEDQEKEYE KT+EAQE++EKRK AVVAKE+ASLEKLQEK
Sbjct: 20  KELEAHFHGLEKSLKRRFHELEDQEKEYESKTVEAQEMIEKRKTAVVAKEQASLEKLQEK 79

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDGS 121
           +DAAVFAI+ A+EK  RV CEEYS   SES  GTMEETPTNS++S ITS+Y+SGT EDGS
Sbjct: 80  RDAAVFAIAIAREKHRRVSCEEYSVDNSESQSGTMEETPTNSMISEITSDYTSGTVEDGS 139

Query: 122 PEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
            EVQSADNGNGEVASYPEL+KLCEEMDAEGLHNFI    + L
Sbjct: 140 SEVQSADNGNGEVASYPELVKLCEEMDAEGLHNFISDNRKNL 181
[Close]
BLAST of Spo02168.1 vs. NCBI nr
Match: gi|595800688|ref|XP_007201712.1| (hypothetical protein PRUPE_ppa003836mg [Prunus persica])

HSP 1 Score: 162.5 bits (410), Expect = 6.100e-37
Identity = 94/164 (57.32%), Postives = 122/164 (74.39%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELE HFHGLEKSLKRRFHELE QEKE+E +T+EAQ++LEKR+AAVVAKE+ASLE LQEK
Sbjct: 41  KELEEHFHGLEKSLKRRFHELESQEKEFESRTVEAQKLLEKRQAAVVAKEQASLETLQEK 100

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGG--TMEETPTNSIVSVITSEYSSGTAED 121
           +DAA++ I+TA+EKQ +V  EE S  T +  GG  ++EE P + +VS           E 
Sbjct: 101 RDAAIYVITTAREKQRKVSTEESSVVTDDGQGGPPSVEEKPPDVMVS-----------ES 160

Query: 122 GSPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
              E++SA+NG+ EV SYP+L+KLCE+MD+EGLH FI    + L
Sbjct: 161 NFEEMKSAENGSIEVMSYPQLVKLCEQMDSEGLHKFISDNRKNL 193
[Close]
BLAST of Spo02168.1 vs. NCBI nr
Match: gi|645260523|ref|XP_008235869.1| (PREDICTED: FRIGIDA-like protein 3 [Prunus mume])

HSP 1 Score: 161.4 bits (407), Expect = 1.400e-36
Identity = 93/164 (56.71%), Postives = 122/164 (74.39%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELE HFHGLEKSLKRRFHELE QEKE+E +T+EAQ++LEKR+AAVVAKE+ASLE LQEK
Sbjct: 41  KELEEHFHGLEKSLKRRFHELESQEKEFESRTVEAQKLLEKRQAAVVAKEQASLETLQEK 100

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGG--TMEETPTNSIVSVITSEYSSGTAED 121
           +DAA++ I+TA+EKQ +V  EE S  T +  GG  ++EE P + +VS           E 
Sbjct: 101 RDAAIYVITTAREKQRKVSTEESSVVTDDGQGGPPSVEEKPPDVMVS-----------ES 160

Query: 122 GSPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
              E++S++NG+ EV SYP+L+KLCE+MD+EGLH FI    + L
Sbjct: 161 NFEEMKSSENGSIEVMSYPQLVKLCEQMDSEGLHKFISDNRKNL 193
[Close]
BLAST of Spo02168.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RK56_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_062870 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.400e-80
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 

		  

Query: 1   MEELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQE 60
           MEELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQE
Sbjct: 1   MEELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQE 60

Query: 61  KKDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDG 120
           KKDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDG
Sbjct: 61  KKDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDG 120

Query: 121 SPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTLLQ 166
           SPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTLLQ
Sbjct: 121 SPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTLLQ 165
[Close]
BLAST of Spo02168.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F349_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g118980 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.200e-61
Identity = 130/162 (80.25%), Postives = 144/162 (88.89%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELEAHFHGLEKSLKRRFHELEDQEKEYE KT+EAQE++EKRKAAVVAKE+ASLEKLQEK
Sbjct: 41  KELEAHFHGLEKSLKRRFHELEDQEKEYESKTVEAQEMIEKRKAAVVAKEQASLEKLQEK 100

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDGS 121
           +DAAVFAI+ A+EK  RV CEEYS   SES  GTMEETPTNS++S ITS+Y+SGT EDGS
Sbjct: 101 RDAAVFAIAIAREKHRRVSCEEYSVDNSESQSGTMEETPTNSMISEITSDYTSGTVEDGS 160

Query: 122 PEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
            EVQSADNGNGEVASYPEL+KLCEEMDAEGLHNFI    + L
Sbjct: 161 SEVQSADNGNGEVASYPELVKLCEEMDAEGLHNFISDNRKNL 202
[Close]
BLAST of Spo02168.1 vs. UniProtKB/TrEMBL
Match: A0A075VNP0_BETVU (FRIGIDA-like protein (Fragment) OS=Beta vulgaris subsp. vulgaris PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 9.400e-61
Identity = 129/162 (79.63%), Postives = 143/162 (88.27%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELEAHFHGLEKSLKRRFHELEDQEKEYE KT+EAQE++EKRK AVVAKE+ASLEKLQEK
Sbjct: 20  KELEAHFHGLEKSLKRRFHELEDQEKEYESKTVEAQEMIEKRKTAVVAKEQASLEKLQEK 79

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDGS 121
           +DAAVFAI+ A+EK  RV CEEYS   SES  GTMEETPTNS++S ITS+Y+SGT EDGS
Sbjct: 80  RDAAVFAIAIAREKHRRVSCEEYSVDNSESQSGTMEETPTNSMISEITSDYTSGTVEDGS 139

Query: 122 PEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
            EVQSADNGNGEVASYPEL+KLCEEMDAEGLHNFI    + L
Sbjct: 140 SEVQSADNGNGEVASYPELVKLCEEMDAEGLHNFISDNRKNL 181
[Close]
BLAST of Spo02168.1 vs. UniProtKB/TrEMBL
Match: M5VPP4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003836mg PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.300e-37
Identity = 94/164 (57.32%), Postives = 122/164 (74.39%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELE HFHGLEKSLKRRFHELE QEKE+E +T+EAQ++LEKR+AAVVAKE+ASLE LQEK
Sbjct: 41  KELEEHFHGLEKSLKRRFHELESQEKEFESRTVEAQKLLEKRQAAVVAKEQASLETLQEK 100

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGG--TMEETPTNSIVSVITSEYSSGTAED 121
           +DAA++ I+TA+EKQ +V  EE S  T +  GG  ++EE P + +VS           E 
Sbjct: 101 RDAAIYVITTAREKQRKVSTEESSVVTDDGQGGPPSVEEKPPDVMVS-----------ES 160

Query: 122 GSPEVQSADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
              E++SA+NG+ EV SYP+L+KLCE+MD+EGLH FI    + L
Sbjct: 161 NFEEMKSAENGSIEVMSYPQLVKLCEQMDSEGLHKFISDNRKNL 193
[Close]
BLAST of Spo02168.1 vs. UniProtKB/TrEMBL
Match: A0A061DLP5_THECC (FRIGIDA-like protein isoform 1 OS=Theobroma cacao GN=TCM_002601 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.500e-34
Identity = 90/165 (54.55%), Postives = 120/165 (72.73%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELE HFHGLEKSLKRRFHELEDQEKE+E KT +A+EIL+KR+AAVVAKE+ASL +LQEK
Sbjct: 41  KELEEHFHGLEKSLKRRFHELEDQEKEFETKTRKAREILQKREAAVVAKEQASLLRLQEK 100

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGG--TMEETPTNSIVSVITSEYSSGTAED 121
           +DAAVFAI+ + EK  ++  EE ++ + +   G  ++EE P +S+ S           E 
Sbjct: 101 RDAAVFAITNSLEKHRKLSSEEPADVSCDGDSGELSVEEKPPDSVAS-----------ES 160

Query: 122 GSPEVQSA-DNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
              +++S+ +NGN EV SYP+L+KLCEEMD+EGLH FI    + L
Sbjct: 161 NLEDIKSSFENGNFEVKSYPQLVKLCEEMDSEGLHKFISDNRKNL 194
[Close]
BLAST of Spo02168.1 vs. ExPASy Swiss-Prot
Match: FRL3_ARATH (FRIGIDA-like protein 3 OS=Arabidopsis thaliana GN=FRL3 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.300e-28
Identity = 83/168 (49.40%), Postives = 114/168 (67.86%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELE HFHGLE+SLKRRFHELEDQEKEYE KT +AQE+LEK+KAAV AKE+A+LE+LQ+K
Sbjct: 41  KELEEHFHGLERSLKRRFHELEDQEKEYETKTRKAQELLEKKKAAVEAKEKAALERLQKK 100

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDGS 121
           +DAA+F I++A +K        Y+ A    P    E  P N+ V   ++ +++ +  D +
Sbjct: 101 RDAAMFTINSALDK--------YNNAPVSKP-SVGERWPQNA-VEDSSNVFAADSITDDN 160

Query: 122 P-----EVQ-SADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
           P     +VQ S   GN EV +YP+L+KLC +MD+ GLH F+    + L
Sbjct: 161 PDGIVQDVQISPVMGNYEVKAYPQLLKLCGDMDSTGLHKFVSDNRKNL 198
[Close]
BLAST of Spo02168.1 vs. TAIR (Arabidopsis)
Match: AT5G48385.1 (FRIGIDA-like protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.300e-29
Identity = 83/168 (49.40%), Postives = 114/168 (67.86%), Query Frame = 1 

		  

Query: 2   EELEAHFHGLEKSLKRRFHELEDQEKEYEIKTMEAQEILEKRKAAVVAKEEASLEKLQEK 61
           +ELE HFHGLE+SLKRRFHELEDQEKEYE KT +AQE+LEK+KAAV AKE+A+LE+LQ+K
Sbjct: 41  KELEEHFHGLERSLKRRFHELEDQEKEYETKTRKAQELLEKKKAAVEAKEKAALERLQKK 100

Query: 62  KDAAVFAISTAKEKQWRVLCEEYSEATSESPGGTMEETPTNSIVSVITSEYSSGTAEDGS 121
           +DAA+F I++A +K        Y+ A    P    E  P N+ V   ++ +++ +  D +
Sbjct: 101 RDAAMFTINSALDK--------YNNAPVSKP-SVGERWPQNA-VEDSSNVFAADSITDDN 160

Query: 122 P-----EVQ-SADNGNGEVASYPELIKLCEEMDAEGLHNFILTTARTL 164
           P     +VQ S   GN EV +YP+L+KLC +MD+ GLH F+    + L
Sbjct: 161 PDGIVQDVQISPVMGNYEVKAYPQLLKLCGDMDSTGLHKFVSDNRKNL 198
The following BLAST results are available for this feature:
BLAST of Spo02168.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902222848|gb|KNA19304.1|2.0e-80100.hypothetical protein SOVF_0628... [more]
gi|731335964|ref|XP_010679002.1|4.6e-6180.2PREDICTED: FRIGIDA-like protei... [more]
gi|667713665|gb|AIG88464.1|1.4e-6079.6FRIGIDA-like protein, partial ... [more]
gi|595800688|ref|XP_007201712.1|6.1e-3757.3hypothetical protein PRUPE_ppa... [more]
gi|645260523|ref|XP_008235869.1|1.4e-3656.7PREDICTED: FRIGIDA-like protei... [more]
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BLAST of Spo02168.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RK56_SPIOL1.4e-80100.Uncharacterized protein OS=Spi... [more]
A0A0J8F349_BETVU3.2e-6180.2Uncharacterized protein OS=Bet... [more]
A0A075VNP0_BETVU9.4e-6179.6FRIGIDA-like protein (Fragment... [more]
M5VPP4_PRUPE4.3e-3757.3Uncharacterized protein OS=Pru... [more]
A0A061DLP5_THECC7.5e-3454.5FRIGIDA-like protein isoform 1... [more]
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BLAST of Spo02168.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FRL3_ARATH2.3e-2849.4FRIGIDA-like protein 3 OS=Arab... [more]
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BLAST of Spo02168.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G48385.11.3e-2949.4FRIGIDA-like protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 55..75
score: -coord: 12..42
scor
NoneNo IPR availablePANTHERPTHR31791FAMILY NOT NAMEDcoord: 2..163
score: 8.0
NoneNo IPR availablePANTHERPTHR31791:SF12FRIGIDA-LIKE PROTEIN 3coord: 2..163
score: 8.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031048 chromatin silencing by small RNA
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0016579 protein deubiquitination
biological_process GO:0000338 protein deneddylation
biological_process GO:0043687 post-translational protein modification
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009640 photomorphogenesis
biological_process GO:0048451 petal formation
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0010014 meristem initiation
biological_process GO:0006606 protein import into nucleus
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0019915 lipid storage
biological_process GO:0010305 leaf vascular tissue pattern formation
biological_process GO:0010358 leaf shaping
biological_process GO:0010338 leaf formation
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0010162 seed dormancy process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0043247 telomere maintenance in response to DNA damage
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0048443 stamen development
biological_process GO:0048453 sepal formation
biological_process GO:0009845 seed germination
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0006396 RNA processing
biological_process GO:0010332 response to gamma radiation
biological_process GO:0050826 response to freezing
biological_process GO:0032204 regulation of telomere maintenance
biological_process GO:0010082 regulation of root meristem growth
biological_process GO:0031060 regulation of histone methylation
biological_process GO:0009909 regulation of flower development
biological_process GO:0006306 DNA methylation
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0071555 cell wall organization
biological_process GO:0051301 cell division
biological_process GO:0007155 cell adhesion
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0006312 mitotic recombination
biological_process GO:0045132 meiotic chromosome segregation
biological_process GO:0009630 gravitropism
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0016567 protein ubiquitination
biological_process GO:0045010 actin nucleation
biological_process GO:0048440 carpel development
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005768 endosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0031461 cullin-RING ubiquitin ligase complex
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005886 plasma membrane
cellular_component GO:0055029 nuclear DNA-directed RNA polymerase complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0000785 chromatin
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0042393 histone binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0005488 binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo175890.73Barchart | Table
Spo242320.73Barchart | Table
Spo224580.72Barchart | Table
Spo119930.71Barchart | Table
Spo010480.71Barchart | Table
Spo209090.71Barchart | Table
Spo059480.70Barchart | Table
Spo076960.70Barchart | Table
Spo243610.70Barchart | Table
Spo029840.70Barchart | Table
Spo171230.70Barchart | Table
Spo051240.70Barchart | Table
Spo056700.70Barchart | Table
Spo076940.69Barchart | Table
Spo003890.69Barchart | Table
Spo167590.69Barchart | Table
Spo219670.69Barchart | Table
Spo105950.69Barchart | Table
Spo031920.69Barchart | Table
Spo206930.69Barchart | Table
Spo166890.69Barchart | Table
Spo233550.69Barchart | Table
Spo250130.68Barchart | Table
Spo173880.68Barchart | Table
Spo171900.68Barchart | Table
Spo247060.68Barchart | Table
Spo117530.68Barchart | Table
Spo119190.68Barchart | Table
Spo166870.68Barchart | Table
Spo030020.68Barchart | Table
Spo003970.68Barchart | Table
Spo047030.68Barchart | Table
Spo254970.68Barchart | Table
Spo051920.68Barchart | Table
Spo011460.68Barchart | Table
Spo231150.68Barchart | Table
Spo229700.68Barchart | Table
Spo085310.68Barchart | Table
Spo184510.68Barchart | Table
Spo089630.68Barchart | Table
Spo020130.68Barchart | Table
Spo191260.67Barchart | Table
Spo002990.67Barchart | Table
Spo007830.67Barchart | Table
Spo013130.67Barchart | Table
Spo039500.67Barchart | Table
Spo050760.67Barchart | Table
Spo054670.67Barchart | Table
Spo054870.67Barchart | Table
Spo056660.67Barchart | Table
Spo092610.67Barchart | Table
Spo092660.67Barchart | Table
Spo103990.67Barchart | Table
Spo115540.67Barchart | Table
Spo116800.67Barchart | Table
Spo158740.67Barchart | Table
Spo159380.67Barchart | Table
Spo179140.67Barchart | Table
Spo181790.67Barchart | Table
Spo208220.67Barchart | Table
Spo215580.67Barchart | Table
Spo235400.67Barchart | Table
Spo240890.67Barchart | Table
Spo096180.66Barchart | Table
Spo074260.66Barchart | Table
Spo214390.66Barchart | Table
Spo001370.66Barchart | Table
Spo070920.66Barchart | Table
Spo069270.66Barchart | Table
Spo224710.66Barchart | Table
Spo060410.66Barchart | Table
Spo042280.66Barchart | Table
Spo264820.66Barchart | Table
Spo037350.66Barchart | Table
Spo160880.66Barchart | Table
Spo112600.66Barchart | Table
Spo091450.66Barchart | Table
Spo188470.66Barchart | Table
Spo085410.66Barchart | Table
Spo206960.66Barchart | Table
Spo018220.66Barchart | Table
Spo093500.65Barchart | Table
Spo170980.65Barchart | Table
Spo024850.65Barchart | Table
Spo021150.65Barchart | Table
Spo087710.65Barchart | Table
Spo152700.65Barchart | Table
Spo000990.65Barchart | Table
Spo257070.65Barchart | Table
Spo116410.65Barchart | Table
Spo100440.65Barchart | Table
Spo208520.65Barchart | Table
Spo066670.65Barchart | Table