Spo02244 (gene) | SpinachBase

Overview


Name	Spo02244
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protease inhibitor/seed storage/lipid transfer family protein
Location	chr5 : 3611613 .. 3613722 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAGAAATACCCTGCTTTTCCCCTAAACAACACTCAAACTAAACTTCCACTCTATAAATCACTCAATATATTTTACCACAAAAATTCATCAAAACAAAAAATACACCAACAAAAAAGGTACTAAAACCAAGTAAAAATGGAGAGTTTTAACCAAAACCCACATTTTACTACACTAAAAGTAGCATTAACAATCATAACCTATTTCTTAGTAGTGAGTTCAGTAAAGGCTCAAATAACTACACTATGTACAGCCTCAATGATAGCCACCTTCACACCATGTATGAACTACATCACCGGCAGCACGGCTAACGGCTCGTCTCCTTCGTCAAACTGTTGTGGTGCATTGAAATCAGTGATGAGTAGCAGTATGGACTGTGCTTGTCTAATGTTAACTGCTAGTATTCCTCTGCCTCAACTTGTTAACAGAACTCTTGCACTTGGACTTCCTAGGGTTTGTAGAAGTGGTGGTGTTCCATTGCATTGTGAAGCTTCTACTAGTCCTCTTCCTGCTCCAGGTACTATTACTTAACAGATTAGAGGGTGCACCTAGTTGTATGTAGATCTAAATGTAACCGGGTTAAAAGAACATTTTTTACGGTTTAAAAACACATTTTTATGGTTTAAAAACACATTTTTGCAGCTTAAAAGCATATTTTTACAGTTTAAGCACATACATGTTTTTTTTTCCAATTTTTTGGTTGTAAAAATGTGCTTTTAATCGGTATATATGTGCTTTTAAACAATAAAAATGTGATTTTTGAAGGAATAAAAATATAAAATGACCCGGTTGCATGTAGAGTTGCATACTTGCTTACAACCATGTGTACCTTCTAGCAATTTTCATTACTTAAATCGTTTTTCTTAATTACTCTAATAGTCGTGCTAATAGTGTAATCTGAACTAGTAATATTAAAATAAATCATGATGGATGGAGTATTTTGGAAATTCAACTCTTTAAGTTTTCATGAAAACTAGAATTATCTGCATTATGCATGCTGAATGATTGTGTTACATGTTTTTGAAGTGTTACTTAAAATAAATTGTAACTTCATGTCTTTACAGGCCCCCTGCAGTTTGGAGCACCTCCCACAGGAGCCTCACCTAGCCCAGCTTCACCTAGCCCGACTTTACCAAGGCCAGTTTCACCTAGCCCAGCTTCACCTAGCCCAACTTCACCCGGCCCAGCTTTTAGTCCCCAAGGTATTTAATTCTTTGAATATTCAACTTATTTTGACTAATTTAAAATAAAATAATTAAACAAGTTCTGACAAGTTAAAACACAAATGATACGCTACTAAGGTGTGTGTTCTCTTCACTTAAAAATAAAAACAAGTTTCATGTCTAATAAGTTGAAAACAGGTCCTATCAGGGCAGTATCTTCCAATTAGATCCTATAAGTCAACTATGCCCAGTTGACTCTTTTACAATCAAGTCTGATCATTTCTAATAAGTTCTAACCAGATTCTATTTGTTGACTAGCTCTCCCCAATTTGCTCTCTTTCAATCATGTCTAATAAGTTCCAATATATCAAATTGTATAAGTTGACTCTCTCCAGTTTACTCTCTTAGCTCAAGTTTGATCAGGTCTAATGAATTCCAATCAGTTTTGATCAGATCCTATCAGGTCAATCGAGTTTAATACATTCAGATAAATTTAGTTTTCATTCGGCGAATGGAACGCACCATAAATGATCAATTACTTGATTAATCGAATGTTTTTATTTTGTTAAAACATGATACTAGCATCCAAAGCAACCGCCTTTACACCAGCATCTGGACCAAAGGCCACAGAATTACCACCGGTACCGGTGGTGGCACCATCATCATCAGTGCAAGTCGAGGCACCATCGAGGACTCCCAGGGTTCGACCAGTGTTGACACCATCGACCTCGAGTGGTGTATCAATGATCCCTTCACCTATCACTATTTGGGCATGTATAATAGGGTTCATGACCTTCATGTTGTTCAAGTTGTAGCGTAACATGTTACATGTATCACACAAAAAATCGTGGTTAAGTGCTCCCTTAATGTATGTTGTATACTTGTATTGGGTTCAAAGCTAAAATGTGTACTAGTTACTAGTACAATTTTCCTATTTCACATTTTCCG

mRNA sequence

TACAGAAATACCCTGCTTTTCCCCTAAACAACACTCAAACTAAACTTCCACTCTATAAATCACTCAATATATTTTACCACAAAAATTCATCAAAACAAAAAATACACCAACAAAAAAGGTACTAAAACCAAGTAAAAATGGAGAGTTTTAACCAAAACCCACATTTTACTACACTAAAAGTAGCATTAACAATCATAACCTATTTCTTAGTAGTGAGTTCAGTAAAGGCTCAAATAACTACACTATGTACAGCCTCAATGATAGCCACCTTCACACCATGTATGAACTACATCACCGGCAGCACGGCTAACGGCTCGTCTCCTTCGTCAAACTGTTGTGGTGCATTGAAATCAGTGATGAGTAGCAGTATGGACTGTGCTTGTCTAATGTTAACTGCTAGTATTCCTCTGCCTCAACTTGTTAACAGAACTCTTGCACTTGGACTTCCTAGGGTTTGTAGAAGTGGTGGTGTTCCATTGCATTGTGAAGCTTCTACTAGTCCTCTTCCTGCTCCAGGCCCCCTGCAGTTTGGAGCACCTCCCACAGGAGCCTCACCTAGCCCAGCTTCACCTAGCCCGACTTTACCAAGGCCAGTTTCACCTAGCCCAGCTTCACCTAGCCCAACTTCACCCGGCCCAGCTTTTAGTCCCCAAGCATCCAAAGCAACCGCCTTTACACCAGCATCTGGACCAAAGGCCACAGAATTACCACCGGTACCGGTGGTGGCACCATCATCATCAGTGCAAGTCGAGGCACCATCGAGGACTCCCAGGGTTCGACCAGTGTTGACACCATCGACCTCGAGTGGTGTATCAATGATCCCTTCACCTATCACTATTTGGGCATGTATAATAGGGTTCATGACCTTCATGTTGTTCAAGTTGTAGCGTAACATGTTACATGTATCACACAAAAAATCGTGGTTAAGTGCTCCCTTAATGTATGTTGTATACTTGTATTGGGTTCAAAGCTAAAATGTGTACTAGTTACTAGTACAATTTTCCTATTTCACATTTTCCG

Coding sequence (CDS)

ATGGAGAGTTTTAACCAAAACCCACATTTTACTACACTAAAAGTAGCATTAACAATCATAACCTATTTCTTAGTAGTGAGTTCAGTAAAGGCTCAAATAACTACACTATGTACAGCCTCAATGATAGCCACCTTCACACCATGTATGAACTACATCACCGGCAGCACGGCTAACGGCTCGTCTCCTTCGTCAAACTGTTGTGGTGCATTGAAATCAGTGATGAGTAGCAGTATGGACTGTGCTTGTCTAATGTTAACTGCTAGTATTCCTCTGCCTCAACTTGTTAACAGAACTCTTGCACTTGGACTTCCTAGGGTTTGTAGAAGTGGTGGTGTTCCATTGCATTGTGAAGCTTCTACTAGTCCTCTTCCTGCTCCAGGCCCCCTGCAGTTTGGAGCACCTCCCACAGGAGCCTCACCTAGCCCAGCTTCACCTAGCCCGACTTTACCAAGGCCAGTTTCACCTAGCCCAGCTTCACCTAGCCCAACTTCACCCGGCCCAGCTTTTAGTCCCCAAGCATCCAAAGCAACCGCCTTTACACCAGCATCTGGACCAAAGGCCACAGAATTACCACCGGTACCGGTGGTGGCACCATCATCATCAGTGCAAGTCGAGGCACCATCGAGGACTCCCAGGGTTCGACCAGTGTTGACACCATCGACCTCGAGTGGTGTATCAATGATCCCTTCACCTATCACTATTTGGGCATGTATAATAGGGTTCATGACCTTCATGTTGTTCAAGTTGTAG

Protein sequence

MESFNQNPHFTTLKVALTIITYFLVVSSVKAQITTLCTASMIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLALGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPTGASPSPASPSPTLPRPVSPSPASPSPTSPGPAFSPQASKATAFTPASGPKATELPPVPVVAPSSSVQVEAPSRTPRVRPVLTPSTSSGVSMIPSPITIWACIIGFMTFMLFKL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo02244.1	Spo02244.1	mRNA

Homology

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BLAST of Spo02244.1 vs. NCBI nr
Match: gi|731336099|ref|XP_010679075.1| (PREDICTED: putative uncharacterized protein FLJ22184 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 258.5 bits (659), Expect = 1.200e-65
Identity = 164/255 (64.31%), Postives = 193/255 (75.69%), Query Frame = 1


		  
Query: 1   MESFNQNPHFTTLKVALTIITYFLVVSSVKAQ----ITTLCTASMIATFTPCMNYITGST 60
           ME   QNP  ++L++ LTI+T+ LV S VKAQ    +TT CTASMIATFTPCMNYITGS+
Sbjct: 1   MEKIKQNPQISSLRIVLTILTFLLVGSLVKAQTNGQVTTPCTASMIATFTPCMNYITGSS 60

Query: 61  ANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLALGLPRVCRSGGVPLHC 120
           A  S+PSSNCC ALK+VMSSSMDC CLM+TAS+PLPQ+VNRTLALGLPR+C++ GVP+ C
Sbjct: 61  AGDSTPSSNCCDALKTVMSSSMDCGCLMVTASVPLPQIVNRTLALGLPRICKTSGVPIQC 120

Query: 121 EASTSPLPAPGPLQFGAPPTGASPSPA-SPSPTLPRPVSPSP----ASPSPTSPGPAFSP 180
           +AS+SPLPAPGPLQFG   +G  PS   SP  +    ++P+P    A+PS   P    SP
Sbjct: 121 QASSSPLPAPGPLQFGPKSSGPPPSSTFSPQASGSPLLAPAPLQIGATPSVPPPNSGLSP 180

Query: 181 QASKATAFTPASGPKATELPPVPVVAPSSSVQVEAPSRTPRVRPVLTPSTSSGVSMIPSP 240
           QASKATAFTPAS P AT LPPV  V+PSS V+VEAPSRTPRVRPVLTPS SS  SMI SP
Sbjct: 181 QASKATAFTPASEPTATGLPPV--VSPSS-VEVEAPSRTPRVRPVLTPSVSSA-SMISSP 240

Query: 241 ITIWACIIGFMTFML 247
            TI A +I +M   L
Sbjct: 241 TTICAFLIMYMLLKL 251

[Close]

BLAST of Spo02244.1 vs. NCBI nr
Match: gi|902235098|gb|KNA23762.1| (hypothetical protein SOVF_022260 [Spinacia oleracea])

HSP 1 Score: 245.0 bits (624), Expect = 1.400e-61
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 1


		  
Query: 41  MIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLA 100
           MIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLA
Sbjct: 1   MIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLA 60

Query: 101 LGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPTGASPSPASPSPTLPRPVSPSPASP 160
           LGLPRVCRSGGVPL CEASTSPLPAPGPLQFGAPPTGASPSPASPSPTLPRPVSPSPASP
Sbjct: 61  LGLPRVCRSGGVPLQCEASTSPLPAPGPLQFGAPPTGASPSPASPSPTLPRPVSPSPASP 120

Query: 161 SPTSPGPAFSPQ 173
           SPTSPGPAFSPQ
Sbjct: 121 SPTSPGPAFSPQ 132

[Close]

BLAST of Spo02244.1 vs. NCBI nr
Match: gi|870858703|gb|KMT10191.1| (hypothetical protein BVRB_5g119520 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 222.6 bits (566), Expect = 7.500e-55
Identity = 141/211 (66.82%), Postives = 163/211 (77.25%), Query Frame = 1


		  
Query: 41  MIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLA 100
           MIATFTPCMNYITGS+A  S+PSSNCC ALK+VMSSSMDC CLM+TAS+PLPQ+VNRTLA
Sbjct: 1   MIATFTPCMNYITGSSAGDSTPSSNCCDALKTVMSSSMDCGCLMVTASVPLPQIVNRTLA 60

Query: 101 LGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPTGASPSPA-SPSPTLPRPVSPSP-- 160
           LGLPR+C++ GVP+ C+AS+SPLPAPGPLQFG   +G  PS   SP  +    ++P+P  
Sbjct: 61  LGLPRICKTSGVPIQCQASSSPLPAPGPLQFGPKSSGPPPSSTFSPQASGSPLLAPAPLQ 120

Query: 161 --ASPSPTSPGPAFSPQASKATAFTPASGPKATELPPVPVVAPSSSVQVEAPSRTPRVRP 220
             A+PS   P    SPQASKATAFTPAS P AT LPPV  V+PSS V+VEAPSRTPRVRP
Sbjct: 121 IGATPSVPPPNSGLSPQASKATAFTPASEPTATGLPPV--VSPSS-VEVEAPSRTPRVRP 180

Query: 221 VLTPSTSSGVSMIPSPITIWACIIGFMTFML 247
           VLTPS SS  SMI SP TI A +I +M   L
Sbjct: 181 VLTPSVSSA-SMISSPTTICAFLIMYMLLKL 207

[Close]

BLAST of Spo02244.1 vs. NCBI nr
Match: gi|590717161|ref|XP_007050547.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Theobroma cacao])

HSP 1 Score: 164.5 bits (415), Expect = 2.400e-37
Identity = 109/224 (48.66%), Postives = 141/224 (62.95%), Query Frame = 1


		  
Query: 26  VSSVKAQITTLCTASMIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLML 85
           V SV  QI+T CTASMI++FTPC+N+ITGST+NGSSP+  CCGA+KS+MS SMDCACL++
Sbjct: 18  VISVNGQISTSCTASMISSFTPCLNFITGSTSNGSSPTQGCCGAVKSLMSGSMDCACLII 77

Query: 86  TASIPLPQLVNRTLALGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPTGASPSPASP 145
           TA++P    +NRTLALGLPR C  GGVP+ C+ S +PLPAPGP+ F  PPT         
Sbjct: 78  TANVPFQLPINRTLALGLPRACNMGGVPVQCKGSGTPLPAPGPVPFLLPPT--------- 137

Query: 146 SPTLPRPVSPSPASPSPTSPGPAFSPQASKATAFTPASGPKATELPPVPVVAPSSSVQVE 205
                  + P+ ASP         SP+ASKA+A  PAS    T L  +P  AP    + E
Sbjct: 138 -------LPPTAASP--------LSPRASKASAEGPAS-ESDTPLDLIPASAPGDEDEPE 197

Query: 206 APSRT--PRVRPVLTPSTSSGVSMIPSPITIWACIIGFMTFMLF 248
            PS T  P +RPV+ PS S+   +  SP ++   +IG   F L+
Sbjct: 198 DPSATINPGIRPVVQPSASNPSYI--SPPSLLILLIGITIFKLY 214

[Close]

BLAST of Spo02244.1 vs. NCBI nr
Match: gi|629092826|gb|KCW58821.1| (hypothetical protein EUGRSUZ_H01457 [Eucalyptus grandis])

HSP 1 Score: 162.2 bits (409), Expect = 1.200e-36
Identity = 113/221 (51.13%), Postives = 147/221 (66.52%), Query Frame = 1


		  
Query: 13  LKVALTIITYFLVVSSVKAQITTLCTASMIATFTPCMNYITGSTANGSSPSSNCCGALKS 72
           L  AL +IT F+   SV AQI+T C+ASMI+TFTPC N+ITGS+ANGSSPSS+CC + K 
Sbjct: 14  LASALCVITPFM---SVDAQISTPCSASMISTFTPCFNFITGSSANGSSPSSSCCDSFKK 73

Query: 73  VMSSSMDCACLMLTASIPLPQLVNRTLALGLPRVCRSGGVPLHCEASTSPLPAPGPLQFG 132
           ++ +S++C CL++TA++P+P  VNRTLAL LP+ C +GG+PL C+AS SPLPAPGP  FG
Sbjct: 74  LLGTSLECTCLVVTANVPIPLPVNRTLALSLPQAC-NGGLPLQCKASGSPLPAPGPTLFG 133

Query: 133 APPTGASPSPASPSPTLPRPVSPSPASPSPTSPGPAFSPQASKAT-AFTPASGPKA-TEL 192
            PP     +PA+ SP      S SP      +P P+ SP+ASKA  A  PA  P++ T  
Sbjct: 134 PPP-----APAASSPHHHEAGSGSPH----LAPSPSLSPRASKAVIASPPAPAPESDTTA 193

Query: 193 PPVPVVAPSSSVQVEAPSRTPRVRPVLTPSTSSGVSMIPSP 232
              P   P  SV    PS TP VRP+L PS+SS +S   +P
Sbjct: 194 DATPAYPPVESV---GPSSTPGVRPILNPSSSSALSFCGNP 218

[Close]

BLAST of Spo02244.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RY43_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_022260 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 9.800e-62
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 1


		  
Query: 41  MIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLA 100
           MIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLA
Sbjct: 1   MIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLA 60

Query: 101 LGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPTGASPSPASPSPTLPRPVSPSPASP 160
           LGLPRVCRSGGVPL CEASTSPLPAPGPLQFGAPPTGASPSPASPSPTLPRPVSPSPASP
Sbjct: 61  LGLPRVCRSGGVPLQCEASTSPLPAPGPLQFGAPPTGASPSPASPSPTLPRPVSPSPASP 120

Query: 161 SPTSPGPAFSPQ 173
           SPTSPGPAFSPQ
Sbjct: 121 SPTSPGPAFSPQ 132

[Close]

BLAST of Spo02244.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F389_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g119520 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.200e-55
Identity = 141/211 (66.82%), Postives = 163/211 (77.25%), Query Frame = 1


		  
Query: 41  MIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPLPQLVNRTLA 100
           MIATFTPCMNYITGS+A  S+PSSNCC ALK+VMSSSMDC CLM+TAS+PLPQ+VNRTLA
Sbjct: 1   MIATFTPCMNYITGSSAGDSTPSSNCCDALKTVMSSSMDCGCLMVTASVPLPQIVNRTLA 60

Query: 101 LGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPTGASPSPA-SPSPTLPRPVSPSP-- 160
           LGLPR+C++ GVP+ C+AS+SPLPAPGPLQFG   +G  PS   SP  +    ++P+P  
Sbjct: 61  LGLPRICKTSGVPIQCQASSSPLPAPGPLQFGPKSSGPPPSSTFSPQASGSPLLAPAPLQ 120

Query: 161 --ASPSPTSPGPAFSPQASKATAFTPASGPKATELPPVPVVAPSSSVQVEAPSRTPRVRP 220
             A+PS   P    SPQASKATAFTPAS P AT LPPV  V+PSS V+VEAPSRTPRVRP
Sbjct: 121 IGATPSVPPPNSGLSPQASKATAFTPASEPTATGLPPV--VSPSS-VEVEAPSRTPRVRP 180

Query: 221 VLTPSTSSGVSMIPSPITIWACIIGFMTFML 247
           VLTPS SS  SMI SP TI A +I +M   L
Sbjct: 181 VLTPSVSSA-SMISSPTTICAFLIMYMLLKL 207

[Close]

BLAST of Spo02244.1 vs. UniProtKB/TrEMBL
Match: A0A061DPJ2_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Theobroma cacao GN=TCM_004316 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.700e-37
Identity = 109/224 (48.66%), Postives = 141/224 (62.95%), Query Frame = 1


		  
Query: 26  VSSVKAQITTLCTASMIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLML 85
           V SV  QI+T CTASMI++FTPC+N+ITGST+NGSSP+  CCGA+KS+MS SMDCACL++
Sbjct: 18  VISVNGQISTSCTASMISSFTPCLNFITGSTSNGSSPTQGCCGAVKSLMSGSMDCACLII 77

Query: 86  TASIPLPQLVNRTLALGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPTGASPSPASP 145
           TA++P    +NRTLALGLPR C  GGVP+ C+ S +PLPAPGP+ F  PPT         
Sbjct: 78  TANVPFQLPINRTLALGLPRACNMGGVPVQCKGSGTPLPAPGPVPFLLPPT--------- 137

Query: 146 SPTLPRPVSPSPASPSPTSPGPAFSPQASKATAFTPASGPKATELPPVPVVAPSSSVQVE 205
                  + P+ ASP         SP+ASKA+A  PAS    T L  +P  AP    + E
Sbjct: 138 -------LPPTAASP--------LSPRASKASAEGPAS-ESDTPLDLIPASAPGDEDEPE 197

Query: 206 APSRT--PRVRPVLTPSTSSGVSMIPSPITIWACIIGFMTFMLF 248
            PS T  P +RPV+ PS S+   +  SP ++   +IG   F L+
Sbjct: 198 DPSATINPGIRPVVQPSASNPSYI--SPPSLLILLIGITIFKLY 214

[Close]

BLAST of Spo02244.1 vs. UniProtKB/TrEMBL
Match: A0A059AYT6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01457 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.400e-37
Identity = 113/221 (51.13%), Postives = 147/221 (66.52%), Query Frame = 1


		  
Query: 13  LKVALTIITYFLVVSSVKAQITTLCTASMIATFTPCMNYITGSTANGSSPSSNCCGALKS 72
           L  AL +IT F+   SV AQI+T C+ASMI+TFTPC N+ITGS+ANGSSPSS+CC + K 
Sbjct: 14  LASALCVITPFM---SVDAQISTPCSASMISTFTPCFNFITGSSANGSSPSSSCCDSFKK 73

Query: 73  VMSSSMDCACLMLTASIPLPQLVNRTLALGLPRVCRSGGVPLHCEASTSPLPAPGPLQFG 132
           ++ +S++C CL++TA++P+P  VNRTLAL LP+ C +GG+PL C+AS SPLPAPGP  FG
Sbjct: 74  LLGTSLECTCLVVTANVPIPLPVNRTLALSLPQAC-NGGLPLQCKASGSPLPAPGPTLFG 133

Query: 133 APPTGASPSPASPSPTLPRPVSPSPASPSPTSPGPAFSPQASKAT-AFTPASGPKA-TEL 192
            PP     +PA+ SP      S SP      +P P+ SP+ASKA  A  PA  P++ T  
Sbjct: 134 PPP-----APAASSPHHHEAGSGSPH----LAPSPSLSPRASKAVIASPPAPAPESDTTA 193

Query: 193 PPVPVVAPSSSVQVEAPSRTPRVRPVLTPSTSSGVSMIPSP 232
              P   P  SV    PS TP VRP+L PS+SS +S   +P
Sbjct: 194 DATPAYPPVESV---GPSSTPGVRPILNPSSSSALSFCGNP 218

[Close]

BLAST of Spo02244.1 vs. UniProtKB/TrEMBL
Match: B9H8A8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23360g PE=4 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 5.100e-34
Identity = 107/232 (46.12%), Postives = 142/232 (61.21%), Query Frame = 1


		  
Query: 17  LTIITYFLVVSSVKAQITTLCTASMIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSS 76
           L  I   L+V SV  QI+T CT SMI++FTPC+N+ITGST NGSSP+ +CC + KS+MS+
Sbjct: 9   LIAILSTLLVISVNGQISTPCTTSMISSFTPCINFITGSTNNGSSPTGSCCSSFKSLMST 68

Query: 77  SMDCACLMLTASIPLPQLVNRTLALGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPT 136
            MDCACL++TA++PL   +NRTLA+ LPR C+  GVP+ C+AS +PLPAPGP+  G    
Sbjct: 69  GMDCACLLITANVPLQLPINRTLAITLPRACKMSGVPMLCKASGTPLPAPGPVLLG---- 128

Query: 137 GASPSPASPSPTLPRPVSPSPASPSPTSPGPAFSPQASKATAFTPASGPKATELPPVPVV 196
                     PTLP           PT+  P  SP+ASKA A  PA   + T LP  P  
Sbjct: 129 ----------PTLP-----------PTAAYP-LSPRASKAVALAPAPESEIT-LPLTPAS 188

Query: 197 APSSSVQVEAPSRTPRVRPVLTPSTSSGVSMIPSPITIWACIIGFMTFMLFK 249
            P     VEAP  T  +RPVL+PS S     +PS ++  + ++ F+  M+FK
Sbjct: 189 PPE---PVEAPPATAGIRPVLSPSAS-----MPSYVSPPSSLLIFLAIMVFK 205

[Close]

BLAST of Spo02244.1 vs. TAIR (Arabidopsis)
Match: AT2G48140.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.400e-27
Identity = 81/196 (41.33%), Postives = 111/196 (56.63%), Query Frame = 1


		  
Query: 32  QITTLCTASMIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLTASIPL 91
           QI+T CT+SMI+TFTPC+N+ITGS+    +P++ CC +LK++ ++ M CACL+LTA++PL
Sbjct: 22  QISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTLTNTGMGCACLILTANVPL 81

Query: 92  PQ-LVNRTLALGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPTGASPSPASPSPTLP 151
           P   +NRTLAL LPR C+ GGVP+ C+A+ +PLPAPG + F   P              P
Sbjct: 82  PTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGQVPFLIAP--------------P 141

Query: 152 RPVSPSPASPSPTSPGPAFSPQASKATAFTPASGPKATELPPVPVVAPSSSVQVEAPSRT 211
             VS             AFSP ASKA   TP   P     P  P   P+       P+  
Sbjct: 142 PQVS-------------AFSPGASKAAGTTPTQAP----APDTPADGPT------GPTTK 180

Query: 212 PRVRPVLTPSTSSGVS 227
             +RPV  P   +G++
Sbjct: 202 SGIRPVDQPMQPTGLA 180

[Close]

BLAST of Spo02244.1 vs. TAIR (Arabidopsis)
Match: AT1G05450.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 99.4 bits (246), Expect = 3.400e-21
Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = 1


		  
Query: 27  SSVKAQITTLCTASMIATFTPCMNYITGSTANGSSPSSNCCGALKSVMSSSMDCACLMLT 86
           +S+ AQI T C+ SM+++ T C +++TG    GS P+S+CCGALKS+  + MDC CL++T
Sbjct: 23  TSILAQINTPCSPSMLSSVTGCTSFLTGG---GSFPTSDCCGALKSLTGTGMDCLCLIVT 82

Query: 87  ASIPLPQLVNRTLALGLPRVCRSGGVPLHCEASTSPLPAPGPLQFGAPPTGASPSPASPS 146
           A +P+   +NRTLA+ LPR C   GVP+ C+AS +PLP PGP  FG  PT       SP+
Sbjct: 83  AGVPISIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPASFG--PT------TSPT 142

Query: 147 PTLPRPVSPSPASPSPTSPGPAFSPQASKATAFTPASGPKATELPPVPVVAPSSS 202
            +       S +   PTSP  + +P   K  + +   G      PP P  +PSSS
Sbjct: 143 DSQTSDPEGSASFRPPTSPTTSQTPN-DKDLSGSGNGGDPMGFAPPPPSSSPSSS 185

[Close]

BLAST of Spo02244.1 vs. TAIR (Arabidopsis)
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 3.900e-17
Identity = 64/180 (35.56%), Postives = 100/180 (55.56%), Query Frame = 1


		  
Query: 15  VALTIITYFLVVSSVKAQITTL--CTASMIATFTPCMNYITGSTANGSSPSSNCCGALKS 74
           ++L +    ++   ++ Q   L  CT SM+ T +PCM +IT S++NG+SPSS+CC +L+S
Sbjct: 5   ISLVVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRS 64

Query: 75  VMSSSMDCACLMLTASIPLPQLVNRTLALGLPRVCRSGGVPLHCEASTSPLPAPGPLQFG 134
           + +  M C CL++T ++P    +NRT A+ LPR C    VPL C+A+ +P  APGP    
Sbjct: 65  LTTGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAPGPAATF 124

Query: 135 AP---------PTGASPSPASPSP--TLPRPVSPSPASPSPTSP--GPAFSPQASKATAF 180
            P         P    P+PA+ +P     RP +PS    +PTS   G    P  + ++A+
Sbjct: 125 GPSMSPGPETDPIVPEPTPAAQTPQSDTTRPFTPSVDGGAPTSDDGGSTSRPSETPSSAY 184

The following BLAST results are available for this feature:

BLAST of Spo02244.1 vs. NCBI nr
BLAST of Spo02244.1 vs. UniProtKB/TrEMBL
BLAST of Spo02244.1 vs. ExPASy Swiss-Prot
BLAST of Spo02244.1 vs. TAIR (Arabidopsis)

BLAST of Spo02244.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731336099\|ref\|XP_010679075.1\|	1.2e-65	64.3	PREDICTED: putative uncharacte...	[more]
gi\|902235098\|gb\|KNA23762.1\|	1.4e-61	99.2	hypothetical protein SOVF_0222...	[more]
gi\|870858703\|gb\|KMT10191.1\|	7.5e-55	66.8	hypothetical protein BVRB_5g11...	[more]
gi\|590717161\|ref\|XP_007050547.1\|	2.4e-37	48.6	Bifunctional inhibitor/lipid-t...	[more]
gi\|629092826\|gb\|KCW58821.1\|	1.2e-36	51.1	hypothetical protein EUGRSUZ_H...	[more]

BLAST of Spo02244.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RY43_SPIOL	9.8e-62	99.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8F389_BETVU	5.2e-55	66.8	Uncharacterized protein OS=Bet...	[more]
A0A061DPJ2_THECC	1.7e-37	48.6	Bifunctional inhibitor/lipid-t...	[more]
A0A059AYT6_EUCGR	8.4e-37	51.1	Uncharacterized protein OS=Euc...	[more]
B9H8A8_POPTR	5.1e-34	46.1	Uncharacterized protein OS=Pop...	[more]

BLAST of Spo02244.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo02244.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G48140.1	1.4e-27	41.3	Bifunctional inhibitor/lipid-t...	[more]
AT1G05450.2	3.4e-21	41.7	Bifunctional inhibitor/lipid-t...	[more]
AT3G22620.1	3.9e-17	35.5	Bifunctional inhibitor/lipid-t...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 23..116 score: 8.0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 41..110 score: 7.94
None	No IPR available	GENE3D	1.10.110.10		coord: 40..109 score: 6.3
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 15..165 score: 4.7
None	No IPR available	PANTHER	PTHR33044:SF13	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN-RELATED	coord: 15..165 score: 4.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0015748	organophosphate ester transport
biological_process	GO:0015716	organic phosphonate transport
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0008152	metabolic process
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0000041	transition metal ion transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0000785	chromatin
molecular_function	GO:0004366	glycerol-3-phosphate O-acyltransferase activity
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0015416	ATPase-coupled organic phosphonate transmembrane transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo00119	0.83	Barchart \| Table
Spo08107	0.82	Barchart \| Table
Spo20985	0.82	Barchart \| Table
Spo24296	0.81	Barchart \| Table
Spo15589	0.81	Barchart \| Table
Spo21844	0.76	Barchart \| Table
Spo21915	0.75	Barchart \| Table
Spo21916	0.74	Barchart \| Table
Spo15041	0.74	Barchart \| Table
Spo02094	0.72	Barchart \| Table
Spo00496	0.72	Barchart \| Table
Spo07368	0.70	Barchart \| Table
Spo05330	0.69	Barchart \| Table
Spo01756	0.68	Barchart \| Table
Spo19880	0.67	Barchart \| Table
Spo16497	0.67	Barchart \| Table
Spo20591	0.67	Barchart \| Table
Spo21236	0.67	Barchart \| Table
Spo17763	0.66	Barchart \| Table
Spo02667	0.66	Barchart \| Table
Spo15544	0.65	Barchart \| Table