Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATATGGAGTCATGTACTGTTTCATGATTTCCTTGTGTTGAATCTAATTATAGATTTAGTTCTAGTAATTAAGCTAAATTAGTTGCCATTCATTCGACCCGATACATAAACCCGACCCATTTCTCACAATTTTGGAAAGGGCGGACTTTTTCCCCCTTCTCTAACTCGTCTCTCCAAGGTGACGGAAGATTGTACCTGGAGAACATGAAAAAGCGTCAAACTGGGTAAGATTTCATAACCTAACCCCTTTCCCATTACCCAATTGTGCCTTTGATTTCATCCCAATTTTCTTACTTTATGCTGAACCCTAATTCATTCATACAACCTTTCGTTTATGGAGAATTTTTTGGACAGAAAGTTTATTAATTTGTTGGGACAATTAGACTGGGATTGATCGGCTAAACAGGCTATACTCTGTGTGTTTATGTTCTAATTTGCTCTTCAAACAAGAATTATGATGTGGGTTTTTGTTGTTATGTGTAAATTTACTTGTAAACTTTGACAGTTTCTGAGAATTAGATCTTTGTTCACAATTTCCCAATTATGTGCTTTGATTTCTTGCCAAGTACTATTTCAATTTTCTTACTCTATGCTGAACCCTGAATGCATTCATACAACCTTTCGTTTATTGAGTAATATTTTAGACAGAAAGTTTATTAATTTGTTGGGACAATTAGACAGGGATGGATCAGCTAAACTCTATGATTTCGTGTAATTGTTGATAATTGGTAATAAAACAGGCTGTATGTTTTGATTTTCTCTTCTAACAAGAATTATGATATGGTTTTCTTGTGTGTAAATTTACCTGTAAACTTGACAGTTTCTGAGAATTAGATCTTTGTTCACAATTTCCCAACAAATGAAAGGAAAAGACAAGTTTGTGGAAACTGGAAACAGTAGGGTTTGACTAGTTTGATGATTTTGGCCTGTCCCGAATTCCCCCCTTTTTACTTATATATAAATGAGTGATTGATTAGATGTGTTTATGTTATGATTTATAATCAAAATGAACCTGATTAGTGGCAGATAGATTCGCCGTATCATAGTTGATGTCTTGATGGAAAAATTCAAGATTGTGTGCTGTTTGGTTGGAGTTTTTTCCAGCATTATAGTAGGATGTTATGGCAGGTCTGAATCCTGTATCAGACTATACAAAGAAGGTGGTGCTCCAGCTGTTCTTCATTCCCCAGAATGTTCCTTTCAGTATATTCTTCCTAGGGAACATAATCATACAACCAAATGCCAGTTTGCTTCACTTCAGGGACGAAGGAAGTATCAGGAAGATCGGGTTTTATGTGATCTCGATATGCAGATCGATCTTCTTGGTAATTGATCCTGCTACCTTTCTTTTCATCAGTTGTTTGCCTCTTTTTTTGTTGCACACATGTACCCTTGCATTTGGATGCTTTCCTTTCCAGTTTTCTAGAATGTTTAGTGAATACAGTGTATACTTTTTAGTTGAACTGTGTTATAGGTACCTCAAATTTATGTTCTCTGCTTTTATAATACCAAACGATGCATGGTTTTTTCATATATTTTCAACTCAGGCTCCGTTTGGTAGGGTGTAAAACATTTTCGTGGAAAACAATTTTCCCCTTTTAAATCATTTTCCGTTGTTTGGTTTGACAAGGTATGGAAACAATTTTCCATAACTTCCTCGAAGGAGGAAAAATATTTTCCATTTAAAAGGAAGGGAAACCACTTTTCCATCTTTCCTCTTGCCCCCATCTTTCTTTTTCCCATCAATCTTCAACCATTTTCCTTTTTCTATTAATTTTCTTGTAAGGAACCTAACAAAGGAAAACTAGTTTGAAACTGTGTTTTTCCTTGAAAAAAGTTTTGCATGGAAAATCATTTTTTATTAAAAATGTTTTACGCCAACCAAACAGAGCATTAATACGAAGTACAATTACAATATGATGCCTTCGCCTTCCGTCTTGGATGTTTTCTGCTCGAGACTTTTGTACATTATTACTTCATGAGCAGAATGTTATGCTTTCCTTTTCATTATCAGCGTGCTGATGAGTGTGAGCTATGCAAAAACAGAATCTTTGACATTTGGACAATAGCATGATTATTTAAGATGATGGTCAGTTTAATTCAAACATTTGCTGCTTGCATCAATTTGAACCTATAAAACTTGATAAAGATTCTGTTTTTCATTTCGAGATAGGACTAGAAACAGAAGAATTTGATTTGTGGAGAAGAAATCATAAGATTTGACTTTAACGCAGGCAACTTAGGTCAAGAAAACCTGAAGATTGGTATAGCAGCTGTATTTGATGGTCATGGTGGTAAGGAAGCCAGTGAATTGGCTGTTCAACTCCTTTCTCACTATCTTCAACTTCACATTAGTTTTTTAAGTAAAAAAGAAATGGATCTCTTTGAAGAGATGCACAACATGGCTTTCCCATTGGAAACGGAGTTCAATTCCTTGGAGACGCATTTTAGAAGGTTAATGCTGATCAATTTAGGACAAGAAACCAGGAAGCTGTACTTTTTACTTGGTTTCTACATTATAGTGCTTACATACCTTCATCTGGGTTTTCCTATTTTTTTTATAAAAAATTTGAGCTTCATTTTTGTCCTGAAAAACTCTTATATGAACTTAATTTTCTTTATATGAGCTTACTGGCCCTAATCTAACTCATTTTTCCTAATCTCTGTTAATCTGAATTATTGGCCTTACATGAACTTATCATTTCTGAAATTATTGACTGCGGATTTTGTTATGGGTGTGCCTTTTCCATCTCTGAACTTTCTCATGATTTCACTGTAGATTTGAGTCTTCATCAGCATTGAATATGCTGAAATCTTGTACGCTTACACTTTTCCTTTAAAATATGACTTGGTGTATCTGAATAAAGCGATCATTTTGTACTCCGTTTCAGGCGCATGAATGTATCGAAGACAATGGAAATTATACAGGAAGCAATTACCCTGACAATTCACGACATTGATTCAACATTTTCTCAAGTTTGTATCACTATCTTCATCTAGAAACCTGATTATACTTTATGAAGGTTTCTAAATGAGAAATAATTTTCATTGTTCACCCGGCATTGCAGGTGGCCTTAAGAAAACATCTGATATCTGGAACGACAGCCACCATAGCTGTTCTCGTGAATAATGAACTACTGGTTGCAAATGTTGGTGATTCAAAGGCATTCTTATGTTCAGAGGTGATGCAAAATAATGATGATAAACACAACCAAGGTAATTGGTTATAATGATTCCGTCACTGATGGACTGCATATCTCTAGCTATTTGGTAATTGGTTATAATGATTCCGTCATTGATGATGATAAATATAAATTGTCTTTTACCACCTCTTAACTACAAGATGGGCGAAAACGTTATGTGAATTAATGGGAAGTTAGGGAAAATGGTAGCTTATATACATGAAAATCGTGGGAGAAGAGAAGAAAATAAAAAATATAGTCGTTGAAATGGATCCGCATAACGTTTCCGTCCATCTTTCCGGCTAAGAGGTGGTGAAAAACAATTTTTATTTTATTTTAGGTGGTAAAAAACAATTTGTCAATTTTTTTAGGTGTTAAAAAACAATTTACCCTTTTGATTTAGTACCTTGAATTATTATAGGTACCCCCATGACCAGGTTACAAGTCATAGACCTAACTAAAGATCATCATCCTGATAGAGATGACGAAAACGCCCGCATAACAGCTTCGGGAGGGTTTGTTTCTCTATTGGGAGTGCCTAGAGTTAATGGCATTCTCGCTGTATCCCGATCAATTGGTGACTTGTACTTGAAAAGGTAACTGATCTGCACACTTTCCTTTCCGCTAATGCCTTGAGAAAAGGTAGCCCTAGCTTTTGTTGAAATTAAAATAGAGATGAGAGAGGGGAAAGAATGTAGCAAAATTATACTATATTTCATTCAATCCAATCTATACAAGAAATTGCCTTTTATATAGACTAAGTGCAAGTTTGGTATGAATCTAGGAAAGGAAATGGATTGGAAACATTTAAGGAGAAATGGTAATGTTAAGTGTTATCATTATTTGTTGTTTGGTATACCTAAGGAAAACAATCCCTTGTATCAAATTAGGGAATAAGGAGGGTAACACTTTGTTACCACAAGGTTAGGAGAGGTAACAAATTGGTGGTAATGGTTACCCTTTAGAAATGGAGTGTGTTACCCATCTCTCATACCAAACAATAGGTAATGGAATTAGTTAACTGTTTCCATTTCCAACACTTGAAAAGTACTATACCAAACATGCTCTAAGTGCATTAACTAACTGAAACTTGGGAACTAATTGCTCATGGCCTACATGGTAGTCCACTAATAACCCACTAACTCAACTAAACAATTAAACTGACTTCCTAGTACCTAATAACTTGCCACTAACTAGTTTACTTAACAATTAACATGTGTCCCTAAACTTTAGGAGTTTAGGAACACTTTGAAGGACCAAATCCAACAGATTTGCTGTCCTTGTCTAAAATAGGCATAAACTTTGCTTCCCGTACTCCGCTTTAAGTATGCTTTTTTTGTTTTTGCATACAAAATTCATAATGACACAAAAAGAGAAATATAATTGTAGACAAGTTTGGAACCCTTAAATCTTTACAAACTAGGCTAGCTGATATTCACATCTTCGAGTGTATGCTAGTTTGATTGTTTTGAAATACCAATTTAAGGAAACCGTCCCCATTATTTCGAAACGGAGGGACTTTATATCTTGTGACTTGTGAGATGTATGAATGGTTGAATTCCTCATACCTGAAAGTAACATAAATAATTTTATGCTGTACTTCTTGTCAGATATGGGGTGATAGCAGAACCAGAGGTTGATTGGCACCATTTGGATGCAAGTAAAGTCTTCCTGGTGGTTGCGTCTGACGGCATCTTTGAGGGTTTGAGCACACAAGAGGTTTGCAGTCTTTTACATGATGCACGATCTCAGGGTAAAGGCCGAAAGAATTGGAGATCATCGAAATGCCAATCCTCGTCATTGGCCGAATGTATAGTGAATATGGCGTATGAGAAAGGCAGCACTGATAACTTGTCTGTTGTTCTACTTCCACTAAGTACTCATGTTAATACTTGAAATCTACTTTGAAGCTCATTTACTGAAAACTGACTTCCTTTTGTATTTAGTTTGCAAAATTAACATAAACTGTGTTTTTTTTCATTGTATTATCGTCTCCTGCATTCCAATTCAGGTTATGTGTTTCAAGAAAAAAAATATACTCCGTACTTCAGAAGTAG TAATATGGAGTCATGTACTGTTTCATGATTTCCTTGTGTTGAATCTAATTATAGATTTAGTTCTAGTAATTAAGCTAAATTAGTTGCCATTCATTCGACCCGATACATAAACCCGACCCATTTCTCACAATTTTGGAAAGGGCGGACTTTTTCCCCCTTCTCTAACTCGTCTCTCCAAGGTGACGGAAGATTGTACCTGGAGAACATGAAAAAGCGTCAAACTGGGTCTGAATCCTGTATCAGACTATACAAAGAAGGTGGTGCTCCAGCTGTTCTTCATTCCCCAGAATATCGATCTTCTTGGCGCATGAATGTATCGAAGACAATGGAAATTATACAGGAAGCAATTACCCTGACAATTCACGACATTGATTCAACATTTTCTCAAGTGGCCTTAAGAAAACATCTGATATCTGGAACGACAGCCACCATAGCTGTTCTCGTGAATAATGAACTACTGGTTGCAAATGTTGGTGATTCAAAGGCATTCTTATGTTCAGAGGTGATGCAAAATAATGATGATAAACACAACCAAGGTACCCCCATGACCAGGTTACAAGTCATAGACCTAACTAAAGATCATCATCCTGATAGAGATGACGAAAACGCCCGCATAACAGCTTCGGGAGGGTTTGTTTCTCTATTGGGAGTGCCTAGAGTTAATGGCATTCTCGCTGTATCCCGATCAATTGGTGACTTGTACTTGAAAAGATATGGGGTGATAGCAGAACCAGAGGTTGATTGGCACCATTTGGATGCAAGTAAAGTCTTCCTGGTGGTTGCGTCTGACGGCATCTTTGAGGGTTTGAGCACACAAGAGGTTTGCAGTCTTTTACATGATGCACGATCTCAGGGTAAAGGCCGAAAGAATTGGAGATCATCGAAATGCCAATCCTCGTCATTGGCCGAATGTATAGTGAATATGGCGTATGAGAAAGGCAGCACTGATAACTTGTCTGTTGTTCTACTTCCACTAAGTACTCATGTTAATACTTGAAATCTACTTTGAAGCTCATTTACTGAAAACTGACTTCCTTTTGTATTTAGTTTGCAAAATTAACATAAACTGTGTTTTTTTTCATTGTATTATCGTCTCCTGCATTCCAATTCAGGTTATGTGTTTCAAGAAAAAAAATATACTCCGTACTTCAGAAGTAG ATGAAAAAGCGTCAAACTGGGTCTGAATCCTGTATCAGACTATACAAAGAAGGTGGTGCTCCAGCTGTTCTTCATTCCCCAGAATATCGATCTTCTTGGCGCATGAATGTATCGAAGACAATGGAAATTATACAGGAAGCAATTACCCTGACAATTCACGACATTGATTCAACATTTTCTCAAGTGGCCTTAAGAAAACATCTGATATCTGGAACGACAGCCACCATAGCTGTTCTCGTGAATAATGAACTACTGGTTGCAAATGTTGGTGATTCAAAGGCATTCTTATGTTCAGAGGTGATGCAAAATAATGATGATAAACACAACCAAGGTACCCCCATGACCAGGTTACAAGTCATAGACCTAACTAAAGATCATCATCCTGATAGAGATGACGAAAACGCCCGCATAACAGCTTCGGGAGGGTTTGTTTCTCTATTGGGAGTGCCTAGAGTTAATGGCATTCTCGCTGTATCCCGATCAATTGGTGACTTGTACTTGAAAAGATATGGGGTGATAGCAGAACCAGAGGTTGATTGGCACCATTTGGATGCAAGTAAAGTCTTCCTGGTGGTTGCGTCTGACGGCATCTTTGAGGGTTTGAGCACACAAGAGGTTTGCAGTCTTTTACATGATGCACGATCTCAGGGTAAAGGCCGAAAGAATTGGAGATCATCGAAATGCCAATCCTCGTCATTGGCCGAATGTATAGTGAATATGGCGTATGAGAAAGGCAGCACTGATAACTTGTCTGTTGTTCTACTTCCACTAAGTACTCATGTTAATACTTGA MKKRQTGSESCIRLYKEGGAPAVLHSPEYRSSWRMNVSKTMEIIQEAITLTIHDIDSTFSQVALRKHLISGTTATIAVLVNNELLVANVGDSKAFLCSEVMQNNDDKHNQGTPMTRLQVIDLTKDHHPDRDDENARITASGGFVSLLGVPRVNGILAVSRSIGDLYLKRYGVIAEPEVDWHHLDASKVFLVVASDGIFEGLSTQEVCSLLHDARSQGKGRKNWRSSKCQSSSLAECIVNMAYEKGSTDNLSVVLLPLSTHVNT Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02264.1 vs. NCBI nr
Match: gi|902151420|gb|KNA05525.1| (hypothetical protein SOVF_189480 isoform C [Spinacia oleracea]) HSP 1 Score: 452.6 bits (1163), Expect = 4.700e-124 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo02264.1 vs. NCBI nr
Match: gi|902151418|gb|KNA05523.1| (hypothetical protein SOVF_189480 isoform A [Spinacia oleracea]) HSP 1 Score: 452.6 bits (1163), Expect = 4.700e-124 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo02264.1 vs. NCBI nr
Match: gi|902151421|gb|KNA05526.1| (hypothetical protein SOVF_189480 isoform D [Spinacia oleracea]) HSP 1 Score: 450.7 bits (1158), Expect = 1.800e-123 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1
BLAST of Spo02264.1 vs. NCBI nr
Match: gi|697117738|ref|XP_009612814.1| (PREDICTED: probable protein phosphatase 2C 51 isoform X2 [Nicotiana tomentosiformis]) HSP 1 Score: 230.3 bits (586), Expect = 3.800e-57 Identity = 122/231 (52.81%), Postives = 167/231 (72.29%), Query Frame = 1
BLAST of Spo02264.1 vs. NCBI nr
Match: gi|698551086|ref|XP_009769196.1| (PREDICTED: probable protein phosphatase 2C 51 isoform X1 [Nicotiana sylvestris]) HSP 1 Score: 227.3 bits (578), Expect = 3.200e-56 Identity = 118/232 (50.86%), Postives = 162/232 (69.83%), Query Frame = 1
BLAST of Spo02264.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFR2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189480 PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 3.300e-124 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo02264.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QE35_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189480 PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 3.300e-124 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo02264.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QG32_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189480 PE=4 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 1.200e-123 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1
BLAST of Spo02264.1 vs. UniProtKB/TrEMBL
Match: K4CAR5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 2.100e-54 Identity = 119/240 (49.58%), Postives = 163/240 (67.92%), Query Frame = 1
BLAST of Spo02264.1 vs. UniProtKB/TrEMBL
Match: D7T3F9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0179g00110 PE=3 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.700e-51 Identity = 114/221 (51.58%), Postives = 159/221 (71.95%), Query Frame = 1
BLAST of Spo02264.1 vs. ExPASy Swiss-Prot
Match: P2C76_ORYSJ (Putative protein phosphatase 2C 76 OS=Oryza sativa subsp. japonica GN=Os11g0586001 PE=3 SV=2) HSP 1 Score: 184.1 bits (466), Expect = 2.000e-45 Identity = 112/288 (38.89%), Postives = 168/288 (58.33%), Query Frame = 1
BLAST of Spo02264.1 vs. ExPASy Swiss-Prot
Match: P2C50_ARATH (Putative protein phosphatase 2C 50 OS=Arabidopsis thaliana GN=At3g63320 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.800e-43 Identity = 114/272 (41.91%), Postives = 167/272 (61.40%), Query Frame = 1
BLAST of Spo02264.1 vs. ExPASy Swiss-Prot
Match: P2C51_ARATH (Probable protein phosphatase 2C 51 OS=Arabidopsis thaliana GN=At3g63340 PE=2 SV=2) HSP 1 Score: 146.7 bits (369), Expect = 3.500e-34 Identity = 99/254 (38.98%), Postives = 144/254 (56.69%), Query Frame = 1
BLAST of Spo02264.1 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.800e-27 Identity = 81/238 (34.03%), Postives = 129/238 (54.20%), Query Frame = 1
BLAST of Spo02264.1 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.700e-26 Identity = 86/225 (38.22%), Postives = 121/225 (53.78%), Query Frame = 1
BLAST of Spo02264.1 vs. TAIR (Arabidopsis)
Match: AT3G63320.1 (Protein phosphatase 2C family protein) HSP 1 Score: 177.6 bits (449), Expect = 1.000e-44 Identity = 114/272 (41.91%), Postives = 167/272 (61.40%), Query Frame = 1
BLAST of Spo02264.1 vs. TAIR (Arabidopsis)
Match: AT3G63340.2 (Protein phosphatase 2C family protein) HSP 1 Score: 146.7 bits (369), Expect = 2.000e-35 Identity = 83/162 (51.23%), Postives = 109/162 (67.28%), Query Frame = 1
BLAST of Spo02264.1 vs. TAIR (Arabidopsis)
Match: AT4G31750.1 (HOPW1-1-interacting 2) HSP 1 Score: 118.2 bits (295), Expect = 7.400e-27 Identity = 78/238 (32.77%), Postives = 124/238 (52.10%), Query Frame = 1
BLAST of Spo02264.1 vs. TAIR (Arabidopsis)
Match: AT5G24940.1 (Protein phosphatase 2C family protein) HSP 1 Score: 109.8 bits (273), Expect = 2.600e-24 Identity = 73/219 (33.33%), Postives = 113/219 (51.60%), Query Frame = 1
BLAST of Spo02264.1 vs. TAIR (Arabidopsis)
Match: AT5G51760.1 (Protein phosphatase 2C family protein) HSP 1 Score: 109.4 bits (272), Expect = 3.500e-24 Identity = 77/205 (37.56%), Postives = 108/205 (52.68%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02264.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02264.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02264.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo02264.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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