Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCACACATAACACTCACCTCTTCCTTTAAAAAAAAAACAGATGAACTAAAACCACCAAACTCACAAAACCAGAAAAAAAAACTTCCATTTTCTCTCTCCTCCATGAAAATTCAGTCCAACCGCTTCACCTTTTCTCTGAGAAATAATGGCAGGATATTCGTGTGAGTTTGAACATTGATTTTCTTTTTGTGTTTTTTATTTCATTTTTTTTTCCAAATTAAGGAAAGAAAACCCTAAAAAAAAGTGAGTTTACTTAGCAGAGTTTACAAGTTATTCCATGCTTTACCTCGCAAATCACAAGGTGATGAAGTTGAACAATTTCTAGGGTATAATTTAAGCTTAATCTTTCTCGGATTCCGTGAATTATAAACCAAAATTTTTGTTTTGTTTATCGCTTTTTTCTTTGGAGATGCGAGAAATGGCGATGAAGCGCGATTTGAAGATTATCTACATCGATTGAAATTCGCGATTAAAAAATTAAATTCGAGCTGAAAATTCGTGTTTTTTGGGAGGTTAAAATGACAAAAATGGAGTTCCGAGGAATTGATAACTGTGACAAAACTTCATCAGAGTTAGTGTAGTACAGCGACATAGAGGAGAGTAGAAGAGGAGAGAGAGAGAAAGTGAGAGACTGCTCAGACTGGTTGTGGCTTTGATTATGCCTTTGACGATGAAGATTCAGCCTATTGACGCCGGCATCGGCGAAATTCCGGCGACTGAGCCAGCAAAGCCGCCGATGGTGAAGTCAAGGCTTAAACGGCTCTTCAGGATCTCTGTCTCTGAGCCGACGGTTCCATTACCAGTGGCTTCATCCGAGCTTTTCGAGCCGAGCTCAGTTTGTTTAGCTAAGATGGTCCAGAATTTCATAGAGGAGAACAACGAGAAACCCTCGCAATCCTCTGCGATGAGGTGCGGGAGAAACCGGTGTAACTGCTTTAACGGAAACGGAAGCGACGGTTCCGATGTCGAATCGGACAACACTGTTTCCTCGGCCGATGTCTGTGATTTTCTCAAGGTATGCCTAAATGCCTAATTTTATCAATTGAATTTATCAAAATTAATTTGTGTTTGATTTTGTTCAATTGGAAATGAACAGAGTTTGGTGGTGTGTGCAAGTGTGAATGAGAAGACTGTGTTGGCAGATACAACAAAGATAATCTCGGAGAAGAAGACATGCAAGAGAAAAAATGAGCTCAGGAAGATTGTTATTGAAGGTTTAATGGCTAGTGGTTATGATGCTGCAATTTGCAAATCTAAATGGGAGAAATCCCCTACTTATCCTGCTGGTAACTATCTTTCTCTCAGAATTAATCAAAGAAATTAGCTTAATTTGGTATTTTTTTGTGTGTTTATTCAGTTGATTATGTTCTTAATTTGATCTTTGAATCTTGAATGCAAGATATGGAAGTTTTAGTTATTGATTTTGTTAGAAAATATATACAGTTCCATTTATATTGCTAATACTATAAATTTGGGTTTTAATTCTCTAAATTCCTGCCTATATATCAGTGATTTCTGTTTTGGGAAGATCAATAAAAAAATAGCCTCTATATTTCTGCCAAAAAATAGTGATTTTTTGTAAAAAATCATTTACTGAGGATGTAATTGCGAAAAATCTACAGCTGTGTGTTTGCTGTAATTGATTTCTGTTGTTCATTTTTTCTACCTGAATTTCAGGAGTTGGATATTTTTTTTTGCTGATTTTGATTAATTAAATGCAATTCAATTGATTAAATTTCTGGGGAATTTGTGGAACAGGGGAATATGAGTATGTGGATGTGATTGTGGGAGGAGAGAGACTGATAATCGACATAGACTTCAGGTCTGAATTCGAGGTTGCAAGATCAACCAAGACCTACAAATCAATCCTTCAAACACTCCCTCACATCTTTGTAGGGAAATCCGATCGTCTTGCCAAGATCATTTGTATTCTCTCTGAAGCAGCCAAACAAAGCCTTAAGAAGAAGGGTATGCACATCCCTCCTTGGAGAAAAGCTGATTATGTTCAAGCCAAGTGGCTCTCTCCACCCACCCGAATCTCCACCATCACCACCACCACTGCCACTGTTACTGCCACTCCGCCACCGAGCCCACTCTCCCCAATGACCTTTATAATCAACTCCGACGGGCCGAGCCCGAATAAGGGTGCAGGGTCTGATCAACACCAGGCTGATGAGTCAGAGCTGAGCCGAAGCTCGCCACCATCGGAGTCTGTGTTCGAGATGTCCGAAAGCTCCGGCGAGGAGGATGTCAAGGAGAATAGGAATAACAACAATAAGAACAATAATAATAATAGCAATAATCCCAAGAAAACCCCTGAAGTTGAGGTTGAGGTTGAGGTTGAGGTTGAGGTTAAAGTAATCAATGGCTTAGCTTCTATCATGGAGGAGAAACCATAGAGATGAAGAACAAGAAAGAAGAAGAAATTTTGATCCTTTTTTTGTTTGTTTATTCCCCAATTTTTNGATGAAGAACAAGAAAGAAGAAGAAATTTTGATCCTTTTTTTGTTTGTTTATTCCCCAATTTTTCTTTTTTTTTTTTGGGAGGGAGTTAATTTTTGGTAATTACTACTACTAAGAAGCAAAAAAAGTTAATAGAGGGTATTATTATGTTAACTACTNTTTTGGGAGGGAGTTAATTTTTGGTAATTACTACTACTAAGAAGCAAAAAAAGTTAATAGAGGGTATTATTATGTTAACTACTACTTACTACATCTAGCTACTACTACTACTACTAGTCTATTACTACTACTACTTCTATGATCAAGAGATTTGCATGGGTGGGTGGTAGCTTTTAGACCTCTAGCTCTCTCTTCCTTTCTATCCCTTCTGGTTTTTTGTTGTAAGGGTTACATTCTACTATCTACTGATATCAATAATATACAAGAAGCAGAAAAATATATTGTTACATAGTACATCATCCAATCTCTCTATTTTTTATTCTTAATGTTCGATTTTCAGTTTTCGACTATATAAATTGATCTTGTTCTTGGTCATTTGATCTCTGTATCTTTGATTCTTGTTGATCTTGTTCTTGGTCATTTGATCTCTATATCTTTGATTCTTATTTCTTAATGTTCGATTTTCAGTTTTTGACTATATACATACACCTTTGATCTTGATCTTGTTCTTGGTCATTTAATCTCTGTATCTTCGATTTTTCCAGTTTTGAACTACATATGTCACACCTTTGATCTTGATCTTGATCTTGTTCTTGGTCATTTGATCTCTGTTTATTGACTCATATTGGATTACATACACGGATACACCTATGATCTTGTTCTTGGTCATTTGATCTCTGTATCTTTGATTCTTATTTCTTAATGTTCTATTTTCAGTAATACATTGGTCTATTTTCAGTAATACATTGGTCATTGGTCTTGTTCTTTTTTCATTCATTTGATCTCTATTGTTCGATTTTCAGTTTTCGACTATTTAATACCCCT TCACACATAACACTCACCTCTTCCTTTAAAAAAAAAACAGATGAACTAAAACCACCAAACTCACAAAACCAGAAAAAAAAACTTCCATTTTCTCTCTCCTCCATGAAAATTCAGTCCAACCGCTTCACCTTTTCTCTGAGAAATAATGGCAGGATATTCGTGTGAGTTTGAACATTGATTTTCTTTTTGTGTTTTTTATTTCATTTTTTTTTCCAAATTAAGGAAAGAAAACCCTAAAAAAAAGTGAGTTTACTTAGCAGAGTTTACAAGTTATTCCATGCTTTACCTCGCAAATCACAAGGTGATGAAGTTGAACAATTTCTAGGGTATAATTTAAGCTTAATCTTTCTCGGATTCCGTGAATTATAAACCAAAATTTTTGTTTTGTTTATCGCTTTTTTCTTTGGAGATGCGAGAAATGGCGATGAAGCGCGATTTGAAGATTATCTACATCGATTGAAATTCGCGATTAAAAAATTAAATTCGAGCTGAAAATTCGTGTTTTTTGGGAGGTTAAAATGACAAAAATGGAGTTCCGAGGAATTGATAACTGTGACAAAACTTCATCAGAGTTAGTGTAGTACAGCGACATAGAGGAGAGTAGAAGAGGAGAGAGAGAGAAAGTGAGAGACTGCTCAGACTGGTTGTGGCTTTGATTATGCCTTTGACGATGAAGATTCAGCCTATTGACGCCGGCATCGGCGAAATTCCGGCGACTGAGCCAGCAAAGCCGCCGATGGTGAAGTCAAGGCTTAAACGGCTCTTCAGGATCTCTGTCTCTGAGCCGACGGTTCCATTACCAGTGGCTTCATCCGAGCTTTTCGAGCCGAGCTCAGTTTGTTTAGCTAAGATGGTCCAGAATTTCATAGAGGAGAACAACGAGAAACCCTCGCAATCCTCTGCGATGAGGTGCGGGAGAAACCGGTGTAACTGCTTTAACGGAAACGGAAGCGACGGTTCCGATGTCGAATCGGACAACACTGTTTCCTCGGCCGATGTCTGTGATTTTCTCAAGAGTTTGGTGGTGTGTGCAAGTGTGAATGAGAAGACTGTGTTGGCAGATACAACAAAGATAATCTCGGAGAAGAAGACATGCAAGAGAAAAAATGAGCTCAGGAAGATTGTTATTGAAGGTTTAATGGCTAGTGGTTATGATGCTGCAATTTGCAAATCTAAATGGGAGAAATCCCCTACTTATCCTGCTGGGGAATATGAGTATGTGGATGTGATTGTGGGAGGAGAGAGACTGATAATCGACATAGACTTCAGGTCTGAATTCGAGGTTGCAAGATCAACCAAGACCTACAAATCAATCCTTCAAACACTCCCTCACATCTTTGTAGGGAAATCCGATCGTCTTGCCAAGATCATTTGTATTCTCTCTGAAGCAGCCAAACAAAGCCTTAAGAAGAAGGGTATGCACATCCCTCCTTGGAGAAAAGCTGATTATGTTCAAGCCAAGTGGCTCTCTCCACCCACCCGAATCTCCACCATCACCACCACCACTGCCACTGTTACTGCCACTCCGCCACCGAGCCCACTCTCCCCAATGACCTTTATAATCAACTCCGACGGGCCGAGCCCGAATAAGGGTGCAGGGTCTGATCAACACCAGGCTGATGAGTCAGAGCTGAGCCGAAGCTCGCCACCATCGGAGTCTGTGTTCGAGATGTCCGAAAGCTCCGGCGAGGAGGATGTCAAGGAGAATAGGAATAACAACAATAAGAACAATAATAATAATAGCAATAATCCCAAGAAAACCCCTGAAGTTGAGGTTGAGGTTGAGGTTGAGGTTGAGGTTAAAGTAATCAATGGCTTAGCTTCTATCATGGAGGAGAAACCATAGAGATGAAGAACAAGAAAGAAGAAGAAATTTTGATCCTTTTTTTGTTTGTTTATTCCCCAATTTTTNGATGAAGAACAAGAAAGAAGAAGAAATTTTGATCCTTTTTTTGTTTGTTTATTCCCCAATTTTTCTTTTTTTTTTTTGGGAGGGAGTTAATTTTTGGTAATTACTACTACTAAGAAGCAAAAAAATTAATAGAGGGTATTATTATGTTAACTACTACTTACTACATCTAGCTACTACTACTACTACTAGTCTATTACTACTACTACTTCTATGATCAAGAGATTTGCATGGGTGGGTGGTAGCTTTTAGACCTCTAGCTCTCTCTTCCTTTCTATCCCTTCTGGTTTTTTGTTGTAAGGGTTACATTCTACTATCTACTGATATCAATAATATACAAGAAGCAGAAAAATATATTGTTACATAGTACATCATCCAATCTCTCTATTTTTTATTCTTAATGTTCGATTTTCAGTTTTCGACTATATAAATTGATCTTGTTCTTGGTCATTTGATCTCTGTATCTTTGATTCTTGTTGATCTTGTTCTTGGTCATTTGATCTCTATATCTTTGATTCTTATTTCTTAATGTTCGATTTTCAGTTTTTGACTATATACATACACCTTTGATCTTGATCTTGTTCTTGGTCATTTAATCTCTGTATCTTCGATTTTTCCAGTTTTGAACTACATATGTCACACCTTTGATCTTGATCTTGATCTTGTTCTTGGTCATTTGATCTCTGTTTATTGACTCATATTGGATTACATACACGGATACACCTATGATCTTGTTCTTGGTCATTTGATCTCTGTATCTTTGATTCTTATTTCTTAATGTTCTATTTTCAGTAATACATTGGTCTATTTTCAGTAATACATTGGTCATTGGTCTTGTTCTTTTTTCATTCATTTGATCTCTATTGTTCGATTTTCAGTTTTCGACTATTTAATACCCCT ATGCCTTTGACGATGAAGATTCAGCCTATTGACGCCGGCATCGGCGAAATTCCGGCGACTGAGCCAGCAAAGCCGCCGATGGTGAAGTCAAGGCTTAAACGGCTCTTCAGGATCTCTGTCTCTGAGCCGACGGTTCCATTACCAGTGGCTTCATCCGAGCTTTTCGAGCCGAGCTCAGTTTGTTTAGCTAAGATGGTCCAGAATTTCATAGAGGAGAACAACGAGAAACCCTCGCAATCCTCTGCGATGAGGTGCGGGAGAAACCGGTGTAACTGCTTTAACGGAAACGGAAGCGACGGTTCCGATGTCGAATCGGACAACACTGTTTCCTCGGCCGATGTCTGTGATTTTCTCAAGAGTTTGGTGGTGTGTGCAAGTGTGAATGAGAAGACTGTGTTGGCAGATACAACAAAGATAATCTCGGAGAAGAAGACATGCAAGAGAAAAAATGAGCTCAGGAAGATTGTTATTGAAGGTTTAATGGCTAGTGGTTATGATGCTGCAATTTGCAAATCTAAATGGGAGAAATCCCCTACTTATCCTGCTGGGGAATATGAGTATGTGGATGTGATTGTGGGAGGAGAGAGACTGATAATCGACATAGACTTCAGGTCTGAATTCGAGGTTGCAAGATCAACCAAGACCTACAAATCAATCCTTCAAACACTCCCTCACATCTTTGTAGGGAAATCCGATCGTCTTGCCAAGATCATTTGTATTCTCTCTGAAGCAGCCAAACAAAGCCTTAAGAAGAAGGGTATGCACATCCCTCCTTGGAGAAAAGCTGATTATGTTCAAGCCAAGTGGCTCTCTCCACCCACCCGAATCTCCACCATCACCACCACCACTGCCACTGTTACTGCCACTCCGCCACCGAGCCCACTCTCCCCAATGACCTTTATAATCAACTCCGACGGGCCGAGCCCGAATAAGGGTGCAGGGTCTGATCAACACCAGGCTGATGAGTCAGAGCTGAGCCGAAGCTCGCCACCATCGGAGTCTGTGTTCGAGATGTCCGAAAGCTCCGGCGAGGAGGATGTCAAGGAGAATAGGAATAACAACAATAAGAACAATAATAATAATAGCAATAATCCCAAGAAAACCCCTGAAGTTGAGGTTGAGGTTGAGGTTGAGGTTGAGGTTAAAGTAATCAATGGCTTAGCTTCTATCATGGAGGAGAAACCATAG MPLTMKIQPIDAGIGEIPATEPAKPPMVKSRLKRLFRISVSEPTVPLPVASSELFEPSSVCLAKMVQNFIEENNEKPSQSSAMRCGRNRCNCFNGNGSDGSDVESDNTVSSADVCDFLKSLVVCASVNEKTVLADTTKIISEKKTCKRKNELRKIVIEGLMASGYDAAICKSKWEKSPTYPAGEYEYVDVIVGGERLIIDIDFRSEFEVARSTKTYKSILQTLPHIFVGKSDRLAKIICILSEAAKQSLKKKGMHIPPWRKADYVQAKWLSPPTRISTITTTTATVTATPPPSPLSPMTFIINSDGPSPNKGAGSDQHQADESELSRSSPPSESVFEMSESSGEEDVKENRNNNNKNNNNNSNNPKKTPEVEVEVEVEVEVKVINGLASIMEEKP Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02279.1 vs. NCBI nr
Match: gi|902189494|gb|KNA11381.1| (hypothetical protein SOVF_135730 [Spinacia oleracea]) HSP 1 Score: 751.5 bits (1939), Expect = 7.400e-214 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 1
BLAST of Spo02279.1 vs. NCBI nr
Match: gi|731336238|ref|XP_010679147.1| (PREDICTED: uncharacterized protein LOC104894580 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 582.0 bits (1499), Expect = 7.700e-163 Identity = 313/395 (79.24%), Postives = 340/395 (86.08%), Query Frame = 1
BLAST of Spo02279.1 vs. NCBI nr
Match: gi|567902912|ref|XP_006443944.1| (hypothetical protein CICLE_v10020512mg [Citrus clementina]) HSP 1 Score: 346.7 bits (888), Expect = 5.500e-92 Identity = 218/417 (52.28%), Postives = 276/417 (66.19%), Query Frame = 1
BLAST of Spo02279.1 vs. NCBI nr
Match: gi|641849714|gb|KDO68588.1| (hypothetical protein CISIN_1g016256mg [Citrus sinensis]) HSP 1 Score: 345.9 bits (886), Expect = 9.300e-92 Identity = 217/417 (52.04%), Postives = 276/417 (66.19%), Query Frame = 1
BLAST of Spo02279.1 vs. NCBI nr
Match: gi|823152810|ref|XP_012476238.1| (PREDICTED: uncharacterized protein LOC105792281 isoform X2 [Gossypium raimondii]) HSP 1 Score: 344.4 bits (882), Expect = 2.700e-91 Identity = 218/428 (50.93%), Postives = 275/428 (64.25%), Query Frame = 1
BLAST of Spo02279.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXW7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_135730 PE=4 SV=1) HSP 1 Score: 751.5 bits (1939), Expect = 5.100e-214 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 1
BLAST of Spo02279.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9K2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120190 PE=4 SV=1) HSP 1 Score: 582.0 bits (1499), Expect = 5.400e-163 Identity = 313/395 (79.24%), Postives = 340/395 (86.08%), Query Frame = 1
BLAST of Spo02279.1 vs. UniProtKB/TrEMBL
Match: V4VVA3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020512mg PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 3.800e-92 Identity = 218/417 (52.28%), Postives = 276/417 (66.19%), Query Frame = 1
BLAST of Spo02279.1 vs. UniProtKB/TrEMBL
Match: A0A067FMJ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016256mg PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 6.500e-92 Identity = 217/417 (52.04%), Postives = 276/417 (66.19%), Query Frame = 1
BLAST of Spo02279.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PG95_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G218200 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 1.900e-91 Identity = 218/428 (50.93%), Postives = 275/428 (64.25%), Query Frame = 1
BLAST of Spo02279.1 vs. TAIR (Arabidopsis)
Match: AT3G22970.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 315.1 bits (806), Expect = 6.200e-86 Identity = 174/313 (55.59%), Postives = 218/313 (69.65%), Query Frame = 1
BLAST of Spo02279.1 vs. TAIR (Arabidopsis)
Match: AT2G38820.2 (Protein of unknown function (DUF506) ) HSP 1 Score: 303.9 bits (777), Expect = 1.400e-82 Identity = 164/290 (56.55%), Postives = 210/290 (72.41%), Query Frame = 1
BLAST of Spo02279.1 vs. TAIR (Arabidopsis)
Match: AT4G14620.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 272.7 bits (696), Expect = 3.500e-73 Identity = 167/301 (55.48%), Postives = 213/301 (70.76%), Query Frame = 1
BLAST of Spo02279.1 vs. TAIR (Arabidopsis)
Match: AT3G54550.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 238.4 bits (607), Expect = 7.400e-63 Identity = 136/282 (48.23%), Postives = 195/282 (69.15%), Query Frame = 1
BLAST of Spo02279.1 vs. TAIR (Arabidopsis)
Match: AT3G07350.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 124.8 bits (312), Expect = 1.200e-28 Identity = 86/272 (31.62%), Postives = 136/272 (50.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02279.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02279.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02279.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo02279.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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