Spo02296 (gene) | SpinachBase

Overview


Name	Spo02296
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Histone H1.2
Location	chr5 : 2397027 .. 2402076 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATACACCGCTGATAGTTATAAACCGTTGATAAAATACCATCCAACGATTAATAATTAAAATTAAAAAAAGAGACAGCGATCCGTGTGAGGGTCCTCTCGACCAATCAGAGCTCACCTTTTGGGATTTTGTTCACGTACATTTCTGACTATTTAAATGCCCTGAGATTAACGTTCATCTTCGCTCATAACCAACACCACCCTCCTCCTAGATCTTAACCGTCGACCCTTCAATTCCGACAGATAGTTTTCTCTCTCTTTCCTTGATTTTCGAACCCTAGATTTCAGCTTCGATTTGTTGTAGTAATGGCGGCGACTGAGGAACCAATTGTTGCAGCACCGGTGGAGCAAGAGGTTGCTTCTGTTCCGGCAGTGGAGGAAGCTCCGGTGGAGACGACTCCCGCCGCTGAAGAGGTCGCCGGAAAGGCGAAGAAAGTGAAGGAGACTAAGCCGAAGAAAGCTGTGACTGGTCCTAAGAAGGCGAGGAAAGCTTCTACTCATCCTACTTACTACGAGGTACGATAATCTGAGAAATGCTGCTGAAATGCTGAATGTTTGAATTCTACACTGATAATTTTTAGATTTTTTAGGTTTTTCGATTGGTTGATTGATTGAATTGAATTTTCTATTTGGAATTCAGATGATGAGTGAGGCGATTTCCACGTTGAAGGAGAGGAACGGTTCAAGTCAGAAGGCGATTCAGAAATTCATTGAGGAGAAACATAAGAATCTTCCACCGACGTTCAGGAAGCTTCTTCTTGTTAACTTGAGGAAATTCGTTGCTTCTGGTCGTTTTGTTAAGGTCAAGGGATCCTACAAGCTTCCTCCTACTCGTTCTGCAGCTCCCAAAGCTGAGGCTGCTCCAGCCAAGAAGTCAAAGACCGCTGCTGTTAAGTCAAAGGCCCCTGCTGCGAAGAAGAAAGCCCCTGCTGCTGCGAAGAAGAAAGCCCCTGCTGCTAAGCCGAAAGCTGTAGCTGCCAAGCCGAAAGCTAAGGCAAAAGCTGTTGTTGCTAAGCCTAAAGCAGCTGAAGCCAAGCCGAAGCCTAAGGCCAAAGCTAAGCCAGCTGCCAAAGCCAAGGCAGTGGTGGCTGCTGCTCCTTCTAGATCAAGAGCTGGTTCTAAGAGGAAAGCTGTGGCTGCTGTGAAGCCGAAGGAGAAGCCGGCTAAGGTTGCGAAGACAGCAGCGAAATCAACTCCATCTAAGAAGGCGGCTCCTGCTCCTGCTAAGAAGGTTACTCCTGCAAAGAAGGCCGCTGCTCCGGCTAAGAAGGCTGCCGCAGTGAAGAGTGTTAAGCCGAAGAGTGTGAAGTCTCCGGCGAAGAGAACAATGCCCAAGAGAGGGAAGAAATGATGATTTTTGATTGTGTTTTTAGATAGTTTTGGGATGTGGTGGGTTGTCTGTAGGGTTTGATTGGGATGAATAGTTTCTGTATATGTTCCGATGTTTTAGTGGGTGTAATGTTGAGACGAGTTATTAGCGCCCATATATACATGGAAGTTGGAGTTCCTCTTTCTTTAATTTTACCTTTTTAGATGTTTTTATTTAAATCTGAGAATGTTATTTAGCTGTAGTGTTTAAGATAATCATTTATGAAATATGAGATGAAAATTTTAGATTCAATTCCGTGTTTATCTCTAATGGTTGTCGCTGATATCTCTTTGTTGGTGAATTGCGCAATTGATTGATCGAAAATCTGTAGTTCCAAGCTCAATGGTATGTTAATTGTCTTCTGTTTTGGTTAATTTATGAACTGTAATGTTTATAATTGATTTCGAAGTTGTTCAATTTAATTCAATCGTAGTATCTGAGTTGAATTTGTTCTCTATGATTTTCAGAGATGAGCTGTCTTCAAGGGGGAGTTTGATAAGCTTGAAGCACACACATGTTCATTTGAAATATGCAGTAAGTCATTATGCAGTTCTGTATATTTAGTTCAATTTTGTTGGAATTGCAATTGAATGCAGTAAGTGATTATGCAGTTCTGTATATATAGTTCAATTTTGTTGGAGCAATTGAAATTGGGTTTCTTGTGATGTTGAATCCTTTTTGCAATTGTCATTGGAAGAACATGGATTAGATTAAGTGACCATTTGAATTGTGTTTAGCCTTTGTGTTTAGTTGTTTGTCATCAGAGTATATGAAAACAATGATGCTGTGAATCTGTGTGTTGTGCAATGTGCATTGTATTCTCTTACTCATTGTTATAGCCGAGAACAACTGAACATTGTGCGATTATTTGTTGGCGCGATATGTGAGGTGATCTCAATCAAGATCATCAATGATGCTGTGAAATTTTATAAGGATCTAACAAAAAGTAGTATAACGGGTGGTGAGGGTTTGAAGTTCCTGAGATATTGGAGAAATTATATTTCAGGATGGTCAATTAGTAATGGTAACTTGGTGAGCTATCTGGTATTCTGGTTACATGAGTTCCTCTTACTTGAGTTGTATTTCTATGTGCCTTTGGGTCAAGTACCATAGCTTACAGAGTTGCAGAGAAGAGTGTAGACTGTAGAATAGATTCTGCTTGTAGGGAGAGTGCTCATCATGTTCCTCTAGTTTCTTCCTGTTCCAGTGAACTTTTATGAACTGATCCATCTATGTTATTGTATGGTGAATACTGAAGAAGATACTTTTCTTTTTCTTTTTATAACCCTTTTCTTTTGCTTCTTATAACCTGTCTTTTCGCTCGACTTTGAAAACTCCGTGCTCAACTAAATTCTTCATCTTTTGTTTGTTACTCTATACCAATCATCTGCATTAATACTGTTTCTGTTGGTTCCATGTCTCTGATCTGTACGTTAAGGGGTGTTAACTGGGTGATATGACATTACCGTTCGTCTGTTCTACTTCAGTTATGGAAGTGAAGCAAATAAACTTATAATCATCACAGTTTTTTGTTTGTATTTTCTGATTAAGTGAGTGTGACCTAAAGTTTTCATGCTTGTTCTCGAACTGTCCGTGCATAATGGCTGGTTATGTTTTCGAACTTATAATGTGCATATTCTTCTCTTACTCATTGTTATATGCTGAGAACAACTCAACAATGTGGGATTATTTGTTGGCGCGATATGTGAGGTGATCTCAATCAAGATCATTCAATGATGCTGTAAAACTTATAAGGATCGAACAAAAAAAATTTGTATAACGGGTGCTGAGGGTTTGAAGTTCCTGAGGTATTTGAGAAATTATATTTCAGGATGGTCAATTGGTAACGGTGACTTGGTGAGCTATCTGGTTGTATGAGTTGAGCTTCCTTGACTTGTGTTTTTATGTGCCTTTGGATCAAGAACCATAGGCCATAGCTTACAGAGAAGAGTGTAGTGGAATAGATTCTGCTTGTATGGAGAGTGCTCATCATGTTCCTCTGGTTTCTTCCTGTTTCAGTGATGAACTGATCTGTCTATGTTGATTGCATGGTGAATACTGAAGAAGATTCTTTTCTTTTGCTTCTTATAACCTGTCTTTTCTCTCGACTTTGAAAACTTCGAGCTAACCAAAAATTTTCACCTTTTGTTCATGCTTGTTCTCTACGGTAGAACTGTCCATGCATAACCCCCTGTTCTTCAACTGATTTGAACTGCTTCTATTCTCCTCCCTTGAAATAATGGCTGGTTATGTTTGGTATTACCCGACATTAGGTAGGTATTAGGACGAATGGAGCCGGTTAGCTTTGTTATTACCCAACATTAGGTTGGTTTAAAGATGAATTGAACTGGTCACTGCAAGTAGAGATGTCTGATTCTGATGAACAATTATGAGAGAAATAGGAATCTATAAGAACAATTATGAGAGTTATTCTGGTTCGGAAGCATACTTTGGTTGTGTAATGTGTATGCATTGATGCAGATGCCAAGTCTCATATTGGACTTTTGTTGGACTACATAGCTTTGTTAGTGAACTTGTAAAAAGATGATAAACAATAAAAAAGAAGCTTTCTTTGTGTTGATAGTATCCATCTCATCAACACGCTTTTATAGCCTCAAGCCCTCAACTGCTCTTCTTTAAAAGGATTGAATAACACTAAAGTAGGGATGGCTTTTACTCTTGCCTTCCTCGTGTCATGTAAAACTTCCTATTTTCAATGTATATTATGATGTTGCATATGCTAATTTAGGGGATACTCAGTTAATGAAGAATGAAATCATGGAATATTGTCTGCTCGTCTGAGAGATGCCTGCAGTTGGTGTACCTGCATTCAGTTCTCGTGTGGATGATGGATTTGGAATTTGGAAGTTTTTTAGGCTGTTCCTTGATTAGAATTTTGGTCCTGACTGTTACTGGACTTCGTTGCTGCCCTCATTCTCATTGATTACTCTTCTCTTTCTGCCTCTTGGTCATATGTGCACAGTACATTTGTTTTGCGTTGGAGCTGTTATTAAATATTAGGTGTGCTATTCTTGTTTCTCTAACCAGGAAATAGACTCCTTTTATGCCTAGTATTCGACAATTGTTACAAAATGACTTCTCAAAATTATTCTATTATCAGAAGACATTCTTCAGGACACATGCTAGATGTAAACAAAGAATGCAACAAAGCTAAGATGTTTAATTTGAAATTATCAAAAGCTAGAAGAAAATGTTGTTTTATGAGATAAGCTATGTGAATATTGTGTTGTACCGGTGAATTTGCTGATATTCATGAATGAGAACTGAAGACCAAAAGGTTGTTTTAGGGTTGGCATTAGGACTTGAATATGTCATGGTGGTTGTTTGGTTGTCAGCGTGATACAACTTAATGGAATCACATTGTGGAAAGCACACTGCTACTTGTGCTTTATTGATCCCAAAATGATGCTGCAGCTGTAAAATCTAAATTGATATTTGCAAGTTAGATGTGCTTGGACCTACTATGAACCTTTAACTTTGTTTTAGCAGAACTTCTATGGAATTCAGGATTGCTGAACGAGAAGCTGGAGATGGTGGCAGATTTCAGCTTGCAGCCTTTTGGAATTCCGGCATATAGCTCTTATGGATTCTGGAAGCTTGTCTTGTTATTTTTGGTATCTATCAACCCTTCAACTCTTTGAATTGAGTACTTTAGTTCCTGT

mRNA sequence

AATACACCGCTGATAGTTATAAACCGTTGATAAAATACCATCCAACGATTAATAATTAAAATTAAAAAAAGAGACAGCGATCCGTGTGAGGGTCCTCTCGACCAATCAGAGCTCACCTTTTGGGATTTTGTTCACGTACATTTCTGACTATTTAAATGCCCTGAGATTAACGTTCATCTTCGCTCATAACCAACACCACCCTCCTCCTAGATCTTAACCGTCGACCCTTCAATTCCGACAGATAGTTTTCTCTCTCTTTCCTTGATTTTCGAACCCTAGATTTCAGCTTCGATTTGTTGTAGTAATGGCGGCGACTGAGGAACCAATTGTTGCAGCACCGGTGGAGCAAGAGGTTGCTTCTGTTCCGGCAGTGGAGGAAGCTCCGGTGGAGACGACTCCCGCCGCTGAAGAGGTCGCCGGAAAGGCGAAGAAAGTGAAGGAGACTAAGCCGAAGAAAGCTGTGACTGGTCCTAAGAAGGCGAGGAAAGCTTCTACTCATCCTACTTACTACGAGATGATGAGTGAGGCGATTTCCACGTTGAAGGAGAGGAACGGTTCAAGTCAGAAGGCGATTCAGAAATTCATTGAGGAGAAACATAAGAATCTTCCACCGACGTTCAGGAAGCTTCTTCTTGTTAACTTGAGGAAATTCGTTGCTTCTGGTCGTTTTGTTAAGGTCAAGGGATCCTACAAGCTTCCTCCTACTCGTTCTGCAGCTCCCAAAGCTGAGGCTGCTCCAGCCAAGAAGTCAAAGACCGCTGCTGTTAAGTCAAAGGCCCCTGCTGCGAAGAAGAAAGCCCCTGCTGCTGCGAAGAAGAAAGCCCCTGCTGCTAAGCCGAAAGCTGTAGCTGCCAAGCCGAAAGCTAAGGCAAAAGCTGTTGTTGCTAAGCCTAAAGCAGCTGAAGCCAAGCCGAAGCCTAAGGCCAAAGCTAAGCCAGCTGCCAAAGCCAAGGCAGTGGTGGCTGCTGCTCCTTCTAGATCAAGAGCTGGTTCTAAGAGGAAAGCTGTGGCTGCTGTGAAGCCGAAGGAGAAGCCGGCTAAGGTTGCGAAGACAGCAGCGAAATCAACTCCATCTAAGAAGGCGGCTCCTGCTCCTGCTAAGAAGGTTACTCCTGCAAAGAAGGCCGCTGCTCCGGCTAAGAAGGCTGCCGCAGTGAAGAGTGTTAAGCCGAAGAGTGTGAAGTCTCCGGCGAAGAGAACAATGCCCAAGAGAGGGAAGAAATGATGATTTTTGATTGTGTTTTTAGATAGTTTTGGGATGTGGTGGGTTGTCTGTAGGGTTTGATTGGGATGAATAGTTTCTGTATATGTTCCGATGTTTTAGTGGGTGTAATGTTGAGACGAGTTATTAGCGCCCATATATACATGGAAGTTGGAGTTCCTCTTTCTTTAATTTTACCTTTTTAGATGTTTTTATTTAAATCTGAGAATGTTATTTAGCTGTAGTGTTTAAGATAATCATTTATGAAATATGAGATGAAAATTTTAGATTCAATTCCGTGTTTATCTCTAATGGTTGTCGCTGATATCTCTTTGTTGGTGAATTGCGCAATTGATTGATCGAAAATCTGTAGTTCCAAGCTCAATGAGATGAGCTGTCTTCAAGGGGGAGTTTGATAAGCTTGAAGCACACACATGTTCATTTGAAATATGCAAACTTCTATGGAATTCAGGATTGCTGAACGAGAAGCTGGAGATGGTGGCAGATTTCAGCTTGCAGCCTTTTGGAATTCCGGCATATAGCTCTTATGGATTCTGGAAGCTTGTCTTGTTATTTTTGGTATCTATCAACCCTTCAACTCTTTGAATTGAGTACTTTAGTTCCTGT

Coding sequence (CDS)

ATGGCGGCGACTGAGGAACCAATTGTTGCAGCACCGGTGGAGCAAGAGGTTGCTTCTGTTCCGGCAGTGGAGGAAGCTCCGGTGGAGACGACTCCCGCCGCTGAAGAGGTCGCCGGAAAGGCGAAGAAAGTGAAGGAGACTAAGCCGAAGAAAGCTGTGACTGGTCCTAAGAAGGCGAGGAAAGCTTCTACTCATCCTACTTACTACGAGATGATGAGTGAGGCGATTTCCACGTTGAAGGAGAGGAACGGTTCAAGTCAGAAGGCGATTCAGAAATTCATTGAGGAGAAACATAAGAATCTTCCACCGACGTTCAGGAAGCTTCTTCTTGTTAACTTGAGGAAATTCGTTGCTTCTGGTCGTTTTGTTAAGGTCAAGGGATCCTACAAGCTTCCTCCTACTCGTTCTGCAGCTCCCAAAGCTGAGGCTGCTCCAGCCAAGAAGTCAAAGACCGCTGCTGTTAAGTCAAAGGCCCCTGCTGCGAAGAAGAAAGCCCCTGCTGCTGCGAAGAAGAAAGCCCCTGCTGCTAAGCCGAAAGCTGTAGCTGCCAAGCCGAAAGCTAAGGCAAAAGCTGTTGTTGCTAAGCCTAAAGCAGCTGAAGCCAAGCCGAAGCCTAAGGCCAAAGCTAAGCCAGCTGCCAAAGCCAAGGCAGTGGTGGCTGCTGCTCCTTCTAGATCAAGAGCTGGTTCTAAGAGGAAAGCTGTGGCTGCTGTGAAGCCGAAGGAGAAGCCGGCTAAGGTTGCGAAGACAGCAGCGAAATCAACTCCATCTAAGAAGGCGGCTCCTGCTCCTGCTAAGAAGGTTACTCCTGCAAAGAAGGCCGCTGCTCCGGCTAAGAAGGCTGCCGCAGTGAAGAGTGTTAAGCCGAAGAGTGTGAAGTCTCCGGCGAAGAGAACAATGCCCAAGAGAGGGAAGAAATGA

Protein sequence

MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKARKASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVAAKPKAKAKAVVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKPKEKPAKVAKTAAKSTPSKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTMPKRGKK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo02296.1	Spo02296.1	mRNA

Homology

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BLAST of Spo02296.1 vs. NCBI nr
Match: gi|902228895|gb|KNA21321.1| (hypothetical protein SOVF_044060 [Spinacia oleracea])

HSP 1 Score: 487.6 bits (1254), Expect = 1.500e-134
Identity = 305/306 (99.67%), Postives = 305/306 (99.67%), Query Frame = 1


		  
Query: 1   MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKAR 60
           MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKAR
Sbjct: 1   MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKAR 60

Query: 61  KASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASG 120
           KASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASG
Sbjct: 61  KASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASG 120

Query: 121 RFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKA 180
           RFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKA
Sbjct: 121 RFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKA 180

Query: 181 VAAKPKAKAKAVVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKP 240
           VAAKPKAKAKAVVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKP
Sbjct: 181 VAAKPKAKAKAVVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKP 240

Query: 241 KEKPAKVAKTAAKSTPSKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTM 300
           KEKPAKVAKTAAKSTPSKKAAPAPAKK TPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTM
Sbjct: 241 KEKPAKVAKTAAKSTPSKKAAPAPAKKATPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTM 300

Query: 301 PKRGKK 307
           PKRGKK
Sbjct: 301 PKRGKK 306

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BLAST of Spo02296.1 vs. NCBI nr
Match: gi|731336305|ref|XP_010679186.1| (PREDICTED: histone H1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 288.5 bits (737), Expect = 1.400e-74
Identity = 219/316 (69.30%), Postives = 240/316 (75.95%), Query Frame = 1


		  
Query: 1   MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKAR 60
           MAATEEPIV  P EQEVAS P VE+ P E     EE  GKAKK K  KP      P+K  
Sbjct: 1   MAATEEPIVE-PTEQEVASAPVVEDVPAEENHVVEEAGGKAKKTKAKKP----AAPRK-- 60

Query: 61  KASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASG 120
           + STHP Y+EMMSEAI+TLKERNGSSQ AIQKFIEEKHKNLP  FRKLLLVNL+KFVASG
Sbjct: 61  RNSTHPPYFEMMSEAITTLKERNGSSQHAIQKFIEEKHKNLPSNFRKLLLVNLKKFVASG 120

Query: 121 RFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKA 180
           R VKVKGS+KLP TRSAAPK E+A +KK K  A  +K   AK K  + AK K  AAKPK 
Sbjct: 121 RLVKVKGSFKLPSTRSAAPKPESASSKKPKATAAATK---AKTKTKSVAKPKTAAAKPKT 180

Query: 181 VAAKPKAKAKAV-VAKPKAAEAKPKPKA-------KAKPAAKAKAVVAAAPSRSR-AGSK 240
            AAKPKAKAK V  AKPKAA AK K KA       KAKPAAK KA  AAAP++++ AG+K
Sbjct: 181 TAAKPKAKAKTVAAAKPKAAPAKAKAKAKPAAKATKAKPAAKPKAAAAAAPAKTKTAGTK 240

Query: 241 RKAVAAVKPKEKPAKVAKTAAKSTPSKKAAPAPAKK-VTPAKKAAAPAKKAAAVKSVKPK 300
           RKAVAAVKPKEK AKVAKT+ +STPS+KAA APAKK   PAKKAAAPAKKAAAVKSVKPK
Sbjct: 241 RKAVAAVKPKEKVAKVAKTSTRSTPSRKAA-APAKKAAAPAKKAAAPAKKAAAVKSVKPK 300

Query: 301 SVKSPAKRTMPKRGKK 307
           SV+SP KR MPKRG+K
Sbjct: 301 SVRSPPKRAMPKRGRK 305

[Close]

BLAST of Spo02296.1 vs. NCBI nr
Match: gi|225437255|ref|XP_002282346.1| (PREDICTED: histone H1 [Vitis vinifera])

HSP 1 Score: 184.9 bits (468), Expect = 2.100e-43
Identity = 165/306 (53.92%), Postives = 188/306 (61.44%), Query Frame = 1


		  
Query: 3   ATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKARKA 62
           A+EEP VA    + VA   A E  P E  PA +  A K KK KE K KK   G KK R  
Sbjct: 2   ASEEPTVAV---EPVAEPEAAE--PAEENPAPK--AAKTKKAKEPKAKKPA-GAKKPRSP 61

Query: 63  STHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRF 122
            THP Y EM++EAI  LKE++GSSQ AI KFIEEKHK LPP F+KLLL++L+KFVA+G+ 
Sbjct: 62  PTHPPYIEMITEAIVALKEKSGSSQYAIAKFIEEKHKQLPPNFKKLLLIHLKKFVAAGKL 121

Query: 123 VKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVA 182
           VKV+GSYKLPP+R +APK   A   K K  A K K  A  K+A     KKAP AKPKA  
Sbjct: 122 VKVRGSYKLPPSRPSAPKPTGAAPAKKKAVATKPKTAAKPKEAKNTKAKKAP-AKPKASV 181

Query: 183 AKPKAKAKA-VVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKPK 242
            KPKA AK    AKPK A AKPK  AK K AAK K V    P               KPK
Sbjct: 182 PKPKAAAKTKAAAKPKVAPAKPKVPAKPKAAAKTKTVTKPKP---------------KPK 241

Query: 243 EKPAKVAKTAAKSTPSKKAA-PAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTM 302
           EKPAK A+T+ ++TP KKAA P PA K TP KKA A        KSVKPKSVKSPAK+  
Sbjct: 242 EKPAKAARTSTRTTPGKKAAPPKPALKKTPVKKAPA--------KSVKPKSVKSPAKKAA 275

Query: 303 PKRGKK 307
            K+ KK
Sbjct: 302 AKKAKK 275

[Close]

BLAST of Spo02296.1 vs. NCBI nr
Match: gi|2623960|emb|CAA73171.1| (histone H1 [Apium graveolens])

HSP 1 Score: 184.9 bits (468), Expect = 2.100e-43
Identity = 181/322 (56.21%), Postives = 205/322 (63.66%), Query Frame = 1


		  
Query: 1   MAATEEPIVAAPVEQEVASVPA-VEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKA 60
           MAA E+PIV  P+E     VP  V EAP E  P AE+ A   KK KE KPKKA   P+K 
Sbjct: 1   MAAVEDPIV--PMEGVEEEVPVTVTEAPEEAAPPAEDPA--PKKGKELKPKKAAA-PRKP 60

Query: 61  RKASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVAS 120
           R A  HP Y EM+++AI++LKER GSSQ+AIQKF+E KHK+LP  FRK+L  NL+K VA+
Sbjct: 61  RSAPAHPPYLEMITDAITSLKERTGSSQQAIQKFLEAKHKDLPAVFRKMLSNNLKKLVAA 120

Query: 121 GRFVKVKGSYKLPPTRSAAP---KAEAAPAKKSKTA--AVKSKAPAAKKKAPAAAKKKAP 180
           G+ VKVK SYKLP  +S+AP   K  AAPAKK   A  A K  A A KKKA AA KKKAP
Sbjct: 121 GKLVKVKASYKLPSAKSSAPAKKKPAAAPAKKKAAAAPAKKKTAAAPKKKAAAAPKKKAP 180

Query: 181 AAKPKAVAAKPKAKAKAVVAKPKA-AEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRK 240
            AK K  AAKPKAKA   V KPKA A  KPK K  AKPAAKAK    A P+         
Sbjct: 181 VAKAKP-AAKPKAKA---VVKPKAKAAVKPKAKPAAKPAAKAKPAAKAKPA--------- 240

Query: 241 AVAAVKPKEKPAKVAKTAAKSTPSKKA----APAPAKKVTPAKKA-AAPAKKAAAVKSVK 300
             A  K K KPAKVA+T+ ++TP KKA    A AP KK TP KKA A P KKAA VK   
Sbjct: 241 --AKPKAKAKPAKVARTSTRTTPGKKAPAKPAAAPVKKATPVKKATATPVKKAAPVKKAA 300

Query: 301 P---KSVKSPAKRTMP-KRGKK 307
           P   KSVK+P KRT   K GKK
Sbjct: 301 PAKGKSVKTPVKRTSARKAGKK 302

[Close]

BLAST of Spo02296.1 vs. NCBI nr
Match: gi|6681423|dbj|BAA88671.1| (histone H1 [Nicotiana tabacum])

HSP 1 Score: 184.5 bits (467), Expect = 2.800e-43
Identity = 166/312 (53.21%), Postives = 192/312 (61.54%), Query Frame = 1


		  
Query: 3   ATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKARKA 62
           ATEEP+VA  +  E A V A E A  +  PA E  + + KK KETK KK    P+K R  
Sbjct: 2   ATEEPVVATEIVTEPAVVEA-EPAKEDNPPAVE--SDEPKKEKETKAKKPAA-PRK-RNP 61

Query: 63  STHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRF 122
            THP+Y+EM+ +AI TLK++ GSSQ AI KFIE+K KNLP  FRKLLLV L+K VASG+ 
Sbjct: 62  PTHPSYFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKL 121

Query: 123 VKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVA 182
           VKVK SYKLP  RSAAPKA A       TA VK K                PAAKPKA  
Sbjct: 122 VKVKSSYKLPAARSAAPKAAA-------TAPVKKK----------------PAAKPKATK 181

Query: 183 AKPKAKAKAVVAKPKAA---EAKPKPK----AKAKPAAKAKAVVAAAP-SRSRAGSKRKA 242
           AKPK K K V  K K A   +AKPKPK    AKAKPA K KA   A P +  +  +  K 
Sbjct: 182 AKPKPKPKTVAPKAKTATKPKAKPKPKAKLVAKAKPAVKPKAAAVAKPKAAEKPKTPVKT 241

Query: 243 VAAVKPKEKPAKVAKTAAKSTPSKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKS 302
            AA KPKEKPAKVA+TA +STPS+KAAP P  K  P KKA      A A KSVK K+ KS
Sbjct: 242 KAAAKPKEKPAKVARTATRSTPSRKAAPKPVAKKAPVKKA------APAAKSVKAKTAKS 279

Query: 303 PAKRTMPKRGKK 307
           PAKR   ++G+K
Sbjct: 302 PAKRASARKGRK 279

[Close]

BLAST of Spo02296.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RP54_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_044060 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.100e-134
Identity = 305/306 (99.67%), Postives = 305/306 (99.67%), Query Frame = 1


		  
Query: 1   MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKAR 60
           MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKAR
Sbjct: 1   MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKAR 60

Query: 61  KASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASG 120
           KASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASG
Sbjct: 61  KASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASG 120

Query: 121 RFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKA 180
           RFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKA
Sbjct: 121 RFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKA 180

Query: 181 VAAKPKAKAKAVVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKP 240
           VAAKPKAKAKAVVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKP
Sbjct: 181 VAAKPKAKAKAVVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKP 240

Query: 241 KEKPAKVAKTAAKSTPSKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTM 300
           KEKPAKVAKTAAKSTPSKKAAPAPAKK TPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTM
Sbjct: 241 KEKPAKVAKTAAKSTPSKKAAPAPAKKATPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTM 300

Query: 301 PKRGKK 307
           PKRGKK
Sbjct: 301 PKRGKK 306

[Close]

BLAST of Spo02296.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9N4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120470 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 9.500e-75
Identity = 219/316 (69.30%), Postives = 240/316 (75.95%), Query Frame = 1


		  
Query: 1   MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKAR 60
           MAATEEPIV  P EQEVAS P VE+ P E     EE  GKAKK K  KP      P+K  
Sbjct: 1   MAATEEPIVE-PTEQEVASAPVVEDVPAEENHVVEEAGGKAKKTKAKKP----AAPRK-- 60

Query: 61  KASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASG 120
           + STHP Y+EMMSEAI+TLKERNGSSQ AIQKFIEEKHKNLP  FRKLLLVNL+KFVASG
Sbjct: 61  RNSTHPPYFEMMSEAITTLKERNGSSQHAIQKFIEEKHKNLPSNFRKLLLVNLKKFVASG 120

Query: 121 RFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKA 180
           R VKVKGS+KLP TRSAAPK E+A +KK K  A  +K   AK K  + AK K  AAKPK 
Sbjct: 121 RLVKVKGSFKLPSTRSAAPKPESASSKKPKATAAATK---AKTKTKSVAKPKTAAAKPKT 180

Query: 181 VAAKPKAKAKAV-VAKPKAAEAKPKPKA-------KAKPAAKAKAVVAAAPSRSR-AGSK 240
            AAKPKAKAK V  AKPKAA AK K KA       KAKPAAK KA  AAAP++++ AG+K
Sbjct: 181 TAAKPKAKAKTVAAAKPKAAPAKAKAKAKPAAKATKAKPAAKPKAAAAAAPAKTKTAGTK 240

Query: 241 RKAVAAVKPKEKPAKVAKTAAKSTPSKKAAPAPAKK-VTPAKKAAAPAKKAAAVKSVKPK 300
           RKAVAAVKPKEK AKVAKT+ +STPS+KAA APAKK   PAKKAAAPAKKAAAVKSVKPK
Sbjct: 241 RKAVAAVKPKEKVAKVAKTSTRSTPSRKAA-APAKKAAAPAKKAAAPAKKAAAVKSVKPK 300

Query: 301 SVKSPAKRTMPKRGKK 307
           SV+SP KR MPKRG+K
Sbjct: 301 SVRSPPKRAMPKRGRK 305

[Close]

BLAST of Spo02296.1 vs. UniProtKB/TrEMBL
Match: F6GXM8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0141g00730 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.500e-43
Identity = 165/306 (53.92%), Postives = 188/306 (61.44%), Query Frame = 1


		  
Query: 3   ATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKARKA 62
           A+EEP VA    + VA   A E  P E  PA +  A K KK KE K KK   G KK R  
Sbjct: 2   ASEEPTVAV---EPVAEPEAAE--PAEENPAPK--AAKTKKAKEPKAKKPA-GAKKPRSP 61

Query: 63  STHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRF 122
            THP Y EM++EAI  LKE++GSSQ AI KFIEEKHK LPP F+KLLL++L+KFVA+G+ 
Sbjct: 62  PTHPPYIEMITEAIVALKEKSGSSQYAIAKFIEEKHKQLPPNFKKLLLIHLKKFVAAGKL 121

Query: 123 VKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVA 182
           VKV+GSYKLPP+R +APK   A   K K  A K K  A  K+A     KKAP AKPKA  
Sbjct: 122 VKVRGSYKLPPSRPSAPKPTGAAPAKKKAVATKPKTAAKPKEAKNTKAKKAP-AKPKASV 181

Query: 183 AKPKAKAKA-VVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKPK 242
            KPKA AK    AKPK A AKPK  AK K AAK K V    P               KPK
Sbjct: 182 PKPKAAAKTKAAAKPKVAPAKPKVPAKPKAAAKTKTVTKPKP---------------KPK 241

Query: 243 EKPAKVAKTAAKSTPSKKAA-PAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTM 302
           EKPAK A+T+ ++TP KKAA P PA K TP KKA A        KSVKPKSVKSPAK+  
Sbjct: 242 EKPAKAARTSTRTTPGKKAAPPKPALKKTPVKKAPA--------KSVKPKSVKSPAKKAA 275

Query: 303 PKRGKK 307
            K+ KK
Sbjct: 302 AKKAKK 275

[Close]

BLAST of Spo02296.1 vs. UniProtKB/TrEMBL
Match: O22672_APIGR (Histone H1 OS=Apium graveolens GN=H1 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.500e-43
Identity = 181/322 (56.21%), Postives = 205/322 (63.66%), Query Frame = 1


		  
Query: 1   MAATEEPIVAAPVEQEVASVPA-VEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKA 60
           MAA E+PIV  P+E     VP  V EAP E  P AE+ A   KK KE KPKKA   P+K 
Sbjct: 1   MAAVEDPIV--PMEGVEEEVPVTVTEAPEEAAPPAEDPA--PKKGKELKPKKAAA-PRKP 60

Query: 61  RKASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVAS 120
           R A  HP Y EM+++AI++LKER GSSQ+AIQKF+E KHK+LP  FRK+L  NL+K VA+
Sbjct: 61  RSAPAHPPYLEMITDAITSLKERTGSSQQAIQKFLEAKHKDLPAVFRKMLSNNLKKLVAA 120

Query: 121 GRFVKVKGSYKLPPTRSAAP---KAEAAPAKKSKTA--AVKSKAPAAKKKAPAAAKKKAP 180
           G+ VKVK SYKLP  +S+AP   K  AAPAKK   A  A K  A A KKKA AA KKKAP
Sbjct: 121 GKLVKVKASYKLPSAKSSAPAKKKPAAAPAKKKAAAAPAKKKTAAAPKKKAAAAPKKKAP 180

Query: 181 AAKPKAVAAKPKAKAKAVVAKPKA-AEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRK 240
            AK K  AAKPKAKA   V KPKA A  KPK K  AKPAAKAK    A P+         
Sbjct: 181 VAKAKP-AAKPKAKA---VVKPKAKAAVKPKAKPAAKPAAKAKPAAKAKPA--------- 240

Query: 241 AVAAVKPKEKPAKVAKTAAKSTPSKKA----APAPAKKVTPAKKA-AAPAKKAAAVKSVK 300
             A  K K KPAKVA+T+ ++TP KKA    A AP KK TP KKA A P KKAA VK   
Sbjct: 241 --AKPKAKAKPAKVARTSTRTTPGKKAPAKPAAAPVKKATPVKKATATPVKKAAPVKKAA 300

Query: 301 P---KSVKSPAKRTMP-KRGKK 307
           P   KSVK+P KRT   K GKK
Sbjct: 301 PAKGKSVKTPVKRTSARKAGKK 302

[Close]

BLAST of Spo02296.1 vs. UniProtKB/TrEMBL
Match: Q9SLS1_TOBAC (Histone H1 OS=Nicotiana tabacum GN=NtH1 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.900e-43
Identity = 166/312 (53.21%), Postives = 192/312 (61.54%), Query Frame = 1


		  
Query: 3   ATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKARKA 62
           ATEEP+VA  +  E A V A E A  +  PA E  + + KK KETK KK    P+K R  
Sbjct: 2   ATEEPVVATEIVTEPAVVEA-EPAKEDNPPAVE--SDEPKKEKETKAKKPAA-PRK-RNP 61

Query: 63  STHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRF 122
            THP+Y+EM+ +AI TLK++ GSSQ AI KFIE+K KNLP  FRKLLLV L+K VASG+ 
Sbjct: 62  PTHPSYFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKL 121

Query: 123 VKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVA 182
           VKVK SYKLP  RSAAPKA A       TA VK K                PAAKPKA  
Sbjct: 122 VKVKSSYKLPAARSAAPKAAA-------TAPVKKK----------------PAAKPKATK 181

Query: 183 AKPKAKAKAVVAKPKAA---EAKPKPK----AKAKPAAKAKAVVAAAP-SRSRAGSKRKA 242
           AKPK K K V  K K A   +AKPKPK    AKAKPA K KA   A P +  +  +  K 
Sbjct: 182 AKPKPKPKTVAPKAKTATKPKAKPKPKAKLVAKAKPAVKPKAAAVAKPKAAEKPKTPVKT 241

Query: 243 VAAVKPKEKPAKVAKTAAKSTPSKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKS 302
            AA KPKEKPAKVA+TA +STPS+KAAP P  K  P KKA      A A KSVK K+ KS
Sbjct: 242 KAAAKPKEKPAKVARTATRSTPSRKAAPKPVAKKAPVKKA------APAAKSVKAKTAKS 279

Query: 303 PAKRTMPKRGKK 307
           PAKR   ++G+K
Sbjct: 302 PAKRASARKGRK 279

[Close]

BLAST of Spo02296.1 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.700e-38
Identity = 173/315 (54.92%), Postives = 199/315 (63.17%), Query Frame = 1


		  
Query: 3   ATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKARKA 62
           ATEEP++   V +E A+   V++   E  P A+  +GKAKK  ETK KK    P+K    
Sbjct: 2   ATEEPVIVNEVVEEQAAPETVKD---EANPPAK--SGKAKK--ETKAKKPAA-PRKRSAT 61

Query: 63  STHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRF 122
            THP Y+EM+ +AI TLKER GSSQ AI KFIEEK K+LP  F+KLLL  L+KFVAS + 
Sbjct: 62  PTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKL 121

Query: 123 VKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPK-AV 182
           VKVK SYKLP    + P A A PAKK K AA KSK PAAK KA    K K PAAK K A 
Sbjct: 122 VKVKNSYKLP--SGSKPAAAAVPAKK-KPAAAKSK-PAAKPKAAVKPKAK-PAAKAKPAA 181

Query: 183 AAKPKAKAK-AVVAKPKAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAV----- 242
            AKP AKAK A  AKP    AK KP AKAKP AKAK   AAA ++ +A  K KA      
Sbjct: 182 KAKPAAKAKPAAKAKP---AAKAKPAAKAKPVAKAKPKAAAA-AKPKAAVKPKAAPAKTK 241

Query: 243 AAVKP----KEKPAKVAKTAAKSTPSKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVKPKS 302
           AAVKP    K   AKVAKTA ++TPS+KAAP    K TPAKK   P KKA A      K+
Sbjct: 242 AAVKPNLKAKTTTAKVAKTATRTTPSRKAAP----KATPAKK--EPVKKAPA------KN 287

Query: 303 VKSPAKRTMPKRGKK 307
           VKSPAK+  PKRG+K
Sbjct: 302 VKSPAKKATPKRGRK 287

[Close]

BLAST of Spo02296.1 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.000e-34
Identity = 152/291 (52.23%), Postives = 174/291 (59.79%), Query Frame = 1


		  
Query: 10  AAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKARKASTHPTYY 69
           AA +E   A+   V +A VE  PAA+    K K VKE K KK V    K R  S+HPTY 
Sbjct: 9   AATIEGNTAADAPVTDAAVEKKPAAK--GRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYE 68

Query: 70  EMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRFVKVKGSY 129
           EM+ +AI TLKER GSSQ AIQKFIEEK K LPPTFRKLLL+NL++ VASG+ VKVK S+
Sbjct: 69  EMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASF 128

Query: 130 KLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVAAKPKAKA 189
           KLP   SA+ KA       S  AA +  APA KK A  A  K    AK K VAA  KAK 
Sbjct: 129 KLP---SASAKAS------SPKAAAEKSAPAKKKPATVAVTK----AKRK-VAAASKAK- 188

Query: 190 KAVVAKPKAAEAKP-KPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAV-AAVKPKEKPAKV 249
           K +  KPK A AK    KAKAKP  +A A          A +KRKAV A  K K +PAK 
Sbjct: 189 KTIAVKPKTAAAKKVTAKAKAKPVPRATA----------AATKRKAVDAKPKAKARPAKA 248

Query: 250 AKTAAKSTPSKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKSPAKR 299
           AKTA  ++P+KKA  A  K  T A K   P KK      VKPK+VKSPAKR
Sbjct: 249 AKTAKVTSPAKKAVAATKKVATVATKKKTPVKKV-----VKPKTVKSPAKR 267

[Close]

BLAST of Spo02296.1 vs. ExPASy Swiss-Prot
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.600e-33
Identity = 142/281 (50.53%), Postives = 165/281 (58.72%), Query Frame = 1


		  
Query: 29  ETTPAAEEVAGKAKKV---KETKPKKAVTGPKKARKASTHPTYYEMMSEAISTLKERNGS 88
           E  PAA+   GK+KK    K TK       P K +  S+HPTY EM+ +AI TLKER GS
Sbjct: 25  EKKPAAK--GGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKERTGS 84

Query: 89  SQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRFVKVKGSYKLPPTRSAAPKAEAAP 148
           SQ AIQKFIEEKHK+LPPTFRKLLLVNL++ VAS + VKVK S+K+P  RSAA    AAP
Sbjct: 85  SQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAP 144

Query: 149 AKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVAAKPKAKAKAVVAKPKAAEAKPKP 208
            KK  T   K K   A   AP  AK KA A   K  AAK  AKAK V AKPKA     KP
Sbjct: 145 VKKKATVVAKPKGKVAAAVAP--AKAKAAAKGTKKPAAKVVAKAK-VTAKPKAKVTAAKP 204

Query: 209 KAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKPKEKPAKVAKTAAKSTPSKKAAPAPA 268
           K+K+  A      VAA P               K KE+PAK ++T+ +++P KK A APA
Sbjct: 205 KSKSVAAVSKTKAVAAKP---------------KAKERPAKASRTSTRTSPGKKVA-APA 264

Query: 269 KKVTPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTMPKRGKK 307
           KKV   KKA A        KSVK   VKSPAKR   ++ KK
Sbjct: 265 KKVAVTKKAPA--------KSVK---VKSPAKRASTRKAKK 273

[Close]

BLAST of Spo02296.1 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.500e-33
Identity = 156/310 (50.32%), Postives = 180/310 (58.06%), Query Frame = 1


		  
Query: 3   ATEEPIVAAP-VEQEVASVPAV---EEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKK 62
           ATEEPIVA   V + + + P      E P +  P AE    K KK K +KPKKA     K
Sbjct: 2   ATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAE--VEKTKKAKGSKPKKA----SK 61

Query: 63  ARKASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVA 122
            R  ++HPTY EM+ +AI +LKE+NGSSQ AI KFIEEK K LP  F+KLLL NL+K VA
Sbjct: 62  PRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVA 121

Query: 123 SGRFVKVKGSYKLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKP 182
           SG+ +KVKGS+KL    SAA K  A    K+KTAA K+K+  AK           PAAKP
Sbjct: 122 SGKLIKVKGSFKL----SAAAKKPAVAKPKAKTAA-KAKSVKAK-----------PAAKP 181

Query: 183 KAVAA-KPK--AKAKAVVAKPKAAEAKPKP-KAKAKPAAKAKAVVAAAPSRSRAGSKRKA 242
           KA A  KPK  +KAKAV AKPK A AKPK   AK KP A                +K KA
Sbjct: 182 KAKAVVKPKVASKAKAVAAKPKKAAAKPKTVAAKTKPTA----------------AKPKA 241

Query: 243 VAAVKPKEKPAKVAKTAAKSTPSKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKS 302
           V   K K KPAKVAKT+ K+T        P KKV   KK AA   K   VKSVK KSVKS
Sbjct: 242 VVKPKSKVKPAKVAKTSVKTT--------PGKKVAAVKKVAA---KKVPVKSVKAKSVKS 262

Query: 303 PAKRTMPKRG 305
           P K+   KRG
Sbjct: 302 PVKKVSVKRG 262

[Close]

BLAST of Spo02296.1 vs. ExPASy Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 3.300e-28
Identity = 143/272 (52.57%), Postives = 161/272 (59.19%), Query Frame = 1


		  
Query: 20  VPAVEEAPVET--TPAAEEVAGKAKKVKETKPKKAVTGPKKARKASTHPTYYEMMSEAIS 79
           V A  EAP +    PAA+  A KAKK          T PKK R + TH  Y EM+SEAI+
Sbjct: 13  VDAAPEAPADAPAAPAADANAAKAKKA---------TAPKK-RASPTHLPYAEMVSEAIT 72

Query: 80  TLKERNGSSQKAIQKFIEEKHK-NLPPTFRKLLLVNLRKFVASGRFVKVKGSYKLPPTRS 139
           +LKER GSS  AI KF+E+KHK  LPP FRKLL V L+K VA G+  KVK SYKL     
Sbjct: 73  SLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLSSATK 132

Query: 140 AAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVAAKPKAKAKAVVAKP 199
             PK +AAP KK KT A K KA AAK KA   AK K PA KPK  AAKPKA     V KP
Sbjct: 133 PNPKPKAAP-KKPKTGAKKPKA-AAKPKAKTPAKAK-PATKPKP-AAKPKA-----VVKP 192

Query: 200 KAAEAKPKPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKPKEKPAKVAKTAAKSTP 259
           K   AKP    KAKPAAKAK           AG+K K +A    K   AK AKT+AK TP
Sbjct: 193 K-TPAKP----KAKPAAKAKP--------KTAGAKPKPLA---KKAGRAKAAKTSAKDTP 246

Query: 260 SKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVK 289
            KK   APAKK  P+KKAA P +KA + K+ K
Sbjct: 253 GKK---APAKKAAPSKKAATPVRKAPSRKAKK 246

[Close]

BLAST of Spo02296.1 vs. TAIR (Arabidopsis)
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 145.6 bits (366), Expect = 5.100e-35
Identity = 152/291 (52.23%), Postives = 174/291 (59.79%), Query Frame = 1


		  
Query: 10  AAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKARKASTHPTYY 69
           AA +E   A+   V +A VE  PAA+    K K VKE K KK V    K R  S+HPTY 
Sbjct: 9   AATIEGNTAADAPVTDAAVEKKPAAK--GRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYE 68

Query: 70  EMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRFVKVKGSY 129
           EM+ +AI TLKER GSSQ AIQKFIEEK K LPPTFRKLLL+NL++ VASG+ VKVK S+
Sbjct: 69  EMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASF 128

Query: 130 KLPPTRSAAPKAEAAPAKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVAAKPKAKA 189
           KLP   SA+ KA       S  AA +  APA KK A  A  K    AK K VAA  KAK 
Sbjct: 129 KLP---SASAKAS------SPKAAAEKSAPAKKKPATVAVTK----AKRK-VAAASKAK- 188

Query: 190 KAVVAKPKAAEAKP-KPKAKAKPAAKAKAVVAAAPSRSRAGSKRKAV-AAVKPKEKPAKV 249
           K +  KPK A AK    KAKAKP  +A A          A +KRKAV A  K K +PAK 
Sbjct: 189 KTIAVKPKTAAAKKVTAKAKAKPVPRATA----------AATKRKAVDAKPKAKARPAKA 248

Query: 250 AKTAAKSTPSKKAAPAPAKKVTPAKKAAAPAKKAAAVKSVKPKSVKSPAKR 299
           AKTA  ++P+KKA  A  K  T A K   P KK      VKPK+VKSPAKR
Sbjct: 249 AKTAKVTSPAKKAVAATKKVATVATKKKTPVKKV-----VKPKTVKSPAKR 267

[Close]

BLAST of Spo02296.1 vs. TAIR (Arabidopsis)
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.500e-34
Identity = 142/281 (50.53%), Postives = 165/281 (58.72%), Query Frame = 1


		  
Query: 29  ETTPAAEEVAGKAKKV---KETKPKKAVTGPKKARKASTHPTYYEMMSEAISTLKERNGS 88
           E  PAA+   GK+KK    K TK       P K +  S+HPTY EM+ +AI TLKER GS
Sbjct: 25  EKKPAAK--GGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKERTGS 84

Query: 89  SQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRFVKVKGSYKLPPTRSAAPKAEAAP 148
           SQ AIQKFIEEKHK+LPPTFRKLLLVNL++ VAS + VKVK S+K+P  RSAA    AAP
Sbjct: 85  SQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAP 144

Query: 149 AKKSKTAAVKSKAPAAKKKAPAAAKKKAPAAKPKAVAAKPKAKAKAVVAKPKAAEAKPKP 208
            KK  T   K K   A   AP  AK KA A   K  AAK  AKAK V AKPKA     KP
Sbjct: 145 VKKKATVVAKPKGKVAAAVAP--AKAKAAAKGTKKPAAKVVAKAK-VTAKPKAKVTAAKP 204

Query: 209 KAKAKPAAKAKAVVAAAPSRSRAGSKRKAVAAVKPKEKPAKVAKTAAKSTPSKKAAPAPA 268
           K+K+  A      VAA P               K KE+PAK ++T+ +++P KK A APA
Sbjct: 205 KSKSVAAVSKTKAVAAKP---------------KAKERPAKASRTSTRTSPGKKVA-APA 264

Query: 269 KKVTPAKKAAAPAKKAAAVKSVKPKSVKSPAKRTMPKRGKK 307
           KKV   KKA A        KSVK   VKSPAKR   ++ KK
Sbjct: 265 KKVAVTKKAPA--------KSVK---VKSPAKRASTRKAKK 273

[Close]

BLAST of Spo02296.1 vs. TAIR (Arabidopsis)
Match: AT2G18050.1 (histone H1-3)

HSP 1 Score: 57.8 bits (138), Expect = 1.400e-8
Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = 1


		  
Query: 46  ETKPKKAVTGPKKARK--ASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKN-LP 105
           E K  K     KK RK   +THP Y++M+ EA+  LKE+NGSS  AI K IEEKHK+ LP
Sbjct: 3   EDKILKKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLP 62

Query: 106 PTFRKLLLVNLRKFVASGRFVKVKGSYKLPPTRSAAPKAEAAPAKKS-----KTAAVKSK 165
            +FRK L + L+  VA G+ VK++ SYKL  T     + +    KK+     K    +++
Sbjct: 63  ESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDKEITKRTR 122

Query: 166 APAAKKKAPAAAKKKAPAAKPKAVAAKPKAKAKAVVAKPKAAEA 202
           + + + K   +  K+    K K  A +PK+  K+ V K KA +A
Sbjct: 123 SSSTRPKKTVSVNKQEKKRKVKK-ARQPKS-IKSSVGKKKAMKA 164

[Close]

BLAST of Spo02296.1 vs. TAIR (Arabidopsis)
Match: AT1G54260.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 49.3 bits (116), Expect = 4.900e-6
Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 1


		  
Query: 63  STHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASGRF 122
           S    Y  M+ EA+ST+ + NGS+ K I +FIE +H+ +P  F+KLL  +L   V+  + 
Sbjct: 2   SNDARYDAMVFEAVSTINDENGSNLKEILRFIEGQHE-VPQNFKKLLSYSLGILVSQDKL 61

Query: 123 VKVKGSYKLPPTRSAAPKAEAAPAKKSK 151
            KV+  YK+  T++  P     P   +K
Sbjct: 62  KKVRNRYKISVTKAIKPTLTLRPKDSTK 88

The following BLAST results are available for this feature:

BLAST of Spo02296.1 vs. NCBI nr
BLAST of Spo02296.1 vs. UniProtKB/TrEMBL
BLAST of Spo02296.1 vs. ExPASy Swiss-Prot
BLAST of Spo02296.1 vs. TAIR (Arabidopsis)

BLAST of Spo02296.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902228895\|gb\|KNA21321.1\|	1.5e-134	99.6	hypothetical protein SOVF_0440...	[more]
gi\|731336305\|ref\|XP_010679186.1\|	1.4e-74	69.3	PREDICTED: histone H1-like [Be...	[more]
gi\|225437255\|ref\|XP_002282346.1\|	2.1e-43	53.9	PREDICTED: histone H1 [Vitis v...	[more]
gi\|2623960\|emb\|CAA73171.1\|	2.1e-43	56.2	histone H1 [Apium graveolens]	[more]
gi\|6681423\|dbj\|BAA88671.1\|	2.8e-43	53.2	histone H1 [Nicotiana tabacum]	[more]

BLAST of Spo02296.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RP54_SPIOL	1.1e-134	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8C9N4_BETVU	9.5e-75	69.3	Uncharacterized protein OS=Bet...	[more]
F6GXM8_VITVI	1.5e-43	53.9	Putative uncharacterized prote...	[more]
O22672_APIGR	1.5e-43	56.2	Histone H1 OS=Apium graveolens...	[more]
Q9SLS1_TOBAC	1.9e-43	53.2	Histone H1 OS=Nicotiana tabacu...	[more]

BLAST of Spo02296.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
H1_SOLLC	2.7e-38	54.9	Histone H1 OS=Solanum lycopers...	[more]
H11_ARATH	9.0e-34	52.2	Histone H1.1 OS=Arabidopsis th...	[more]
H12_ARATH	2.6e-33	50.5	Histone H1.2 OS=Arabidopsis th...	[more]
H1_PEA	4.5e-33	50.3	Histone H1 OS=Pisum sativum PE...	[more]
H1_MAIZE	3.3e-28	52.5	Histone H1 OS=Zea mays PE=2 SV...	[more]

BLAST of Spo02296.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G06760.1	5.1e-35	52.2	winged-helix DNA-binding trans...	[more]
AT2G30620.1	1.5e-34	50.5	winged-helix DNA-binding trans...	[more]
AT2G18050.1	1.4e-8	38.4	histone H1-3	[more]
AT1G54260.1	4.9e-6	35.2	winged-helix DNA-binding trans...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 65..131 score: 3.4
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 62..128 score: 6.5
IPR005818	Linker histone H1/H5, domain H15	PROFILE	PS51504	H15	coord: 64..133 score: 31
IPR005819	Histone H5	PRINTS	PR00624	HISTONEH5	coord: 150..164 score: 9.7E-11coord: 185..202 score: 9.7E-11coord: 51..72 score: 9.7E-11coord: 207..226 score: 9.7E-11coord: 78..95 score: 9.7
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	1.10.10.10		coord: 60..135 score: 3.6
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 62..144 score: 2.78
None	No IPR available	PANTHER	PTHR11467	HISTONE H1/H5	coord: 233..302 score: 4.0E-36coord: 60..170 score: 4.0
None	No IPR available	PANTHER	PTHR11467:SF44	SUBFAMILY NOT NAMED	coord: 233..302 score: 4.0E-36coord: 60..170 score: 4.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo15069	0.67	Barchart \| Table
Spo03731	0.67	Barchart \| Table
Spo01751	0.67	Barchart \| Table
Spo24586	0.66	Barchart \| Table
Spo21737	0.66	Barchart \| Table
Spo04571	0.66	Barchart \| Table
Spo15696	0.65	Barchart \| Table