Spo02383 (gene)

Overview
NameSpo02383
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionDownstream neighbor of son, putative isoform 1
Locationchr5 : 2614505 .. 2615698 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAGTACCACCTCTACTAAAGGTCATGGAATCAAAGTTGGTCCTAGTTATCTTAAATATGGAAGTGGTCTTAATCAAACTAAACGGTCTGTACCTCCAAACCATTTCAACTGCCTGTTTTCGTATTTGTTCAACTTGTGAATTGTCATTCTGCAGGTGAGATGCAAAGAGATCAAGAGAGTCGATGCTTTGCAGTCAAAAGGGTTGGCGGCAAAAGATGTGGAATTCCTTGGTTCTAAGAGTAGTGTCTGCTACAGTATTGAAGTAAAGGATGCTTATCTTCCTCCCTGGATAATTTGCTCCCTATGCGCAGCAATGGGGTCTGAGGGGAGAAGTTTTGAGGCAAGGTGTGTGCTCCACTATCCTTTACTATTTTCAGGCTAGGAAGATGGTGATAGGCTAGATAATGTTGTAAACTGTACTTGATGGCTTGAGATGTTAAATAACTTTTTTGAACTGGCTTTCATGCAGCTTTTTGACAGACTCGAATACCATGGGATTGAATGCTGCTATTGAAGCAGTCAGCCAAAAATCCAACACTAATACCGATGAGACAACCGGAGATTCACAAGAAGATACATATACGTTTGGTATTTCAGCAGCTGTGGTTAATTCTGGATTATATTCCTCATATCTGAAGGCGGTGAAGTATTCAAATGGGTCTTATGTAGCTGCACTTTCTCCTGTTTGAACAACAAATGAAACTTTTGCTGTCTTCTTGGAGGCAGTGACTAATGAGGCCAGTGTTTGATTCTCCCCTTGGTTTGTTTATAAGTTCTTTAAGACGTACTCATCCTCAGTGTATAATGAATCCAATACAATGTACGTTTTTAAATGGGAAGGGTTTAAAACTGTGGTCATTTTGAATGTTTCAAATGAATTGTAATCTGTTTTTGGATAAACTTACACATTACCCTATCTCATGAATGAGTAAGTTGACTATTGAGATAAAACTTATTTTCTGGATAGGAGAATGTATTTCAAGTAGAGAGAGAAGGGAGGAGGAAAAGTATTGACGAGATAGAGGAGAGAGGGAAATTGGGTTAGTCAGGTCGGCCCAGAGGTTGTAGAGGCCATTGTGCTAAATACTTTGTATTAAATTTAGGCCCCTAAAAATGGTTATTGTTTTATAAAAGCAACTAAGAACGTGAAATTCTAGAAATTTGAAAAGAAAAAACAGATACTCCCTCC

mRNA sequence

ATGCCAAGTACCACCTCTACTAAAGGTCATGGAATCAAAGTGAGATGCAAAGAGATCAAGAGAGTCGATGCTTTGCAGTCAAAAGGGTTGGCGGCAAAAGATGTGGAATTCCTTGGTTCTAAGAGTAGTGTCTGCTACAGTATTGAAGTAAAGGATGCTTATCTTCCTCCCTGGATAATTTGCTCCCTATGCGCAGCAATGGGGTCTGAGGGGAGAAGTTTTGAGGCAAGCTTTTTGACAGACTCGAATACCATGGGATTGAATGCTGCTATTGAAGCAGTCAGCCAAAAATCCAACACTAATACCGATGAGACAACCGGAGATTCACAAGAAGATACATATACGTTTGGTATTTCAGCAGCTGTGGTTAATTCTGGATTATATTCCTCATATCTGAAGGCGGTGAAGTATTCAAATGGGTCTTATGTAGCTGCACTTTCTCCTGTTTGAACAACAAATGAAACTTTTGCTGTCTTCTTGGAGGCAGTGACTAATGAGGCCAGTGTTTGATTCTCCCCTTGGTTTGTTTATAAGTTCTTTAAGACGTACTCATCCTCAGTGTATAATGAATCCAATACAATGTACGTTTTTAAATGGGAAGGGTTTAAAACTGTGGTCATTTTGAATGTTTCAAATGAATTGTAATCTGTTTTTGGATAAACTTACACATTACCCTATCTCATGAATGAGTAAGTTGACTATTGAGATAAAACTTATTTTCTGGATAGGAGAATGTATTTCAAGTAGAGAGAGAAGGGAGGAGGAAAAGTATTGACGAGATAGAGGAGAGAGGGAAATTGGGTTAGTCAGGTCGGCCCAGAGGTTGTAGAGGCCATTGTGCTAAATACTTTGTATTAAATTTAGGCCCCTAAAAATGGTTATTGTTTTATAAAAGCAACTAAGAACGTGAAATTCTAGAAATTTGAAAAGAAAAAACAGATACTCCCTCC

Coding sequence (CDS)

ATGCCAAGTACCACCTCTACTAAAGGTCATGGAATCAAAGTGAGATGCAAAGAGATCAAGAGAGTCGATGCTTTGCAGTCAAAAGGGTTGGCGGCAAAAGATGTGGAATTCCTTGGTTCTAAGAGTAGTGTCTGCTACAGTATTGAAGTAAAGGATGCTTATCTTCCTCCCTGGATAATTTGCTCCCTATGCGCAGCAATGGGGTCTGAGGGGAGAAGTTTTGAGGCAAGCTTTTTGACAGACTCGAATACCATGGGATTGAATGCTGCTATTGAAGCAGTCAGCCAAAAATCCAACACTAATACCGATGAGACAACCGGAGATTCACAAGAAGATACATATACGTTTGGTATTTCAGCAGCTGTGGTTAATTCTGGATTATATTCCTCATATCTGAAGGCGGTGAAGTATTCAAATGGGTCTTATGTAGCTGCACTTTCTCCTGTTTGA

Protein sequence

MPSTTSTKGHGIKVRCKEIKRVDALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGRSFEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYLKAVKYSNGSYVAALSPV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02383.1Spo02383.1mRNA


Homology
[Close]
BLAST of Spo02383.1 vs. NCBI nr
Match: gi|902220388|gb|KNA18589.1| (hypothetical protein SOVF_069190, partial [Spinacia oleracea])

HSP 1 Score: 262.7 bits (670), Expect = 3.900e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 14  VRCKEIKRVDALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGRS 73
           VRCKEIKRVDALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGRS
Sbjct: 1   VRCKEIKRVDALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGRS 60

Query: 74  FEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYLK 133
           FEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYLK
Sbjct: 61  FEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYLK 120

Query: 134 AVKYSNGSYVAALSPV 150
           AVKYSNGSYVAALSPV
Sbjct: 121 AVKYSNGSYVAALSPV 136
[Close]
BLAST of Spo02383.1 vs. NCBI nr
Match: gi|902197839|gb|KNA13534.1| (hypothetical protein SOVF_115840 [Spinacia oleracea])

HSP 1 Score: 249.6 bits (636), Expect = 3.400e-63
Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 1 

		  

Query: 13  KVRCKEIKRVDALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGR 72
           +VRCKEIKRVDALQSKGLA KD E LGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGR
Sbjct: 372 QVRCKEIKRVDALQSKGLAVKDGESLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGR 431

Query: 73  SFEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYL 132
           SFEASFLTD NTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAV+NSGL+S+YL
Sbjct: 432 SFEASFLTDLNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVINSGLHSTYL 491

Query: 133 KAVKYSNGSYVAALSPV 150
           KAVKYSNGSYVAALSPV
Sbjct: 492 KAVKYSNGSYVAALSPV 508
[Close]
BLAST of Spo02383.1 vs. NCBI nr
Match: gi|731333192|ref|XP_010677601.1| (PREDICTED: protein downstream neighbor of Son isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 196.8 bits (499), Expect = 2.600e-47
Identity = 104/138 (75.36%), Postives = 120/138 (86.96%), Query Frame = 1 

		  

Query: 13  KVRCKEIKRVDALQSKGLAAKDVEFL-GSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEG 72
           +V+CKEIKRVDALQSKGL +KD E + G KS VCYSIEVKD YLPPWII ++C+AM SEG
Sbjct: 495 QVKCKEIKRVDALQSKGLVSKDGESIDGPKSGVCYSIEVKDPYLPPWIISAICSAMSSEG 554

Query: 73  RSFEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSY 132
           +S+EA F+TD N+ GLNAA+EAVSQ  N+NTDET GDSQEDTYTFGISAAV NSGL S+ 
Sbjct: 555 KSYEAIFVTDPNSAGLNAALEAVSQ--NSNTDETIGDSQEDTYTFGISAAVANSGLCSAS 614

Query: 133 LKAVKYSNGSYVAALSPV 150
           LKA+KYSNGSYVA+LSPV
Sbjct: 615 LKALKYSNGSYVASLSPV 630
[Close]
BLAST of Spo02383.1 vs. NCBI nr
Match: gi|731333194|ref|XP_010677602.1| (PREDICTED: protein downstream neighbor of Son isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 196.8 bits (499), Expect = 2.600e-47
Identity = 104/138 (75.36%), Postives = 120/138 (86.96%), Query Frame = 1 

		  

Query: 13  KVRCKEIKRVDALQSKGLAAKDVEFL-GSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEG 72
           +V+CKEIKRVDALQSKGL +KD E + G KS VCYSIEVKD YLPPWII ++C+AM SEG
Sbjct: 494 QVKCKEIKRVDALQSKGLVSKDGESIDGPKSGVCYSIEVKDPYLPPWIISAICSAMSSEG 553

Query: 73  RSFEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSY 132
           +S+EA F+TD N+ GLNAA+EAVSQ  N+NTDET GDSQEDTYTFGISAAV NSGL S+ 
Sbjct: 554 KSYEAIFVTDPNSAGLNAALEAVSQ--NSNTDETIGDSQEDTYTFGISAAVANSGLCSAS 613

Query: 133 LKAVKYSNGSYVAALSPV 150
           LKA+KYSNGSYVA+LSPV
Sbjct: 614 LKALKYSNGSYVASLSPV 629
[Close]
BLAST of Spo02383.1 vs. NCBI nr
Match: gi|731384638|ref|XP_010648208.1| (PREDICTED: protein downstream neighbor of Son isoform X2 [Vitis vinifera])

HSP 1 Score: 142.9 bits (359), Expect = 4.500e-31
Identity = 77/140 (55.00%), Postives = 99/140 (70.71%), Query Frame = 1 

		  

Query: 13  KVRCKEIKRVD--ALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSE 72
           +V C+E+KR D  A   KG   KD       + + YSIE+KDAY+PPWII S+CA MGSE
Sbjct: 495 EVSCRELKRADHVAFPLKGSKMKDEAIESVSAGLSYSIEIKDAYIPPWIISSICATMGSE 554

Query: 73  GRSFEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDS-QEDTYTFGISAAVVNSGLYS 132
           GRSFEASF T+  ++GLNAA+E V QKS+T     TG++ QE TY FG+  AVV S ++S
Sbjct: 555 GRSFEASFTTEPTSIGLNAAVETVGQKSDTQA--ATGEAIQESTYAFGVPEAVVTSYMHS 614

Query: 133 SYLKAVKYSNGSYVAALSPV 150
           ++LK +KY+NGSY A LSPV
Sbjct: 615 AFLKGLKYANGSYTARLSPV 632
[Close]
BLAST of Spo02383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RI03_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_069190 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 2.700e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 14  VRCKEIKRVDALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGRS 73
           VRCKEIKRVDALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGRS
Sbjct: 1   VRCKEIKRVDALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGRS 60

Query: 74  FEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYLK 133
           FEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYLK
Sbjct: 61  FEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYLK 120

Query: 134 AVKYSNGSYVAALSPV 150
           AVKYSNGSYVAALSPV
Sbjct: 121 AVKYSNGSYVAALSPV 136
[Close]
BLAST of Spo02383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3L1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_115840 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.400e-63
Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 1 

		  

Query: 13  KVRCKEIKRVDALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGR 72
           +VRCKEIKRVDALQSKGLA KD E LGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGR
Sbjct: 372 QVRCKEIKRVDALQSKGLAVKDGESLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGR 431

Query: 73  SFEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYL 132
           SFEASFLTD NTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAV+NSGL+S+YL
Sbjct: 432 SFEASFLTDLNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVINSGLHSTYL 491

Query: 133 KAVKYSNGSYVAALSPV 150
           KAVKYSNGSYVAALSPV
Sbjct: 492 KAVKYSNGSYVAALSPV 508
[Close]
BLAST of Spo02383.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCT3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g109140 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.800e-47
Identity = 104/138 (75.36%), Postives = 120/138 (86.96%), Query Frame = 1 

		  

Query: 13  KVRCKEIKRVDALQSKGLAAKDVEFL-GSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEG 72
           +V+CKEIKRVDALQSKGL +KD E + G KS VCYSIEVKD YLPPWII ++C+AM SEG
Sbjct: 494 QVKCKEIKRVDALQSKGLVSKDGESIDGPKSGVCYSIEVKDPYLPPWIISAICSAMSSEG 553

Query: 73  RSFEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSY 132
           +S+EA F+TD N+ GLNAA+EAVSQ  N+NTDET GDSQEDTYTFGISAAV NSGL S+ 
Sbjct: 554 KSYEAIFVTDPNSAGLNAALEAVSQ--NSNTDETIGDSQEDTYTFGISAAVANSGLCSAS 613

Query: 133 LKAVKYSNGSYVAALSPV 150
           LKA+KYSNGSYVA+LSPV
Sbjct: 614 LKALKYSNGSYVASLSPV 629
[Close]
BLAST of Spo02383.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CHL3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g109140 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.800e-47
Identity = 104/138 (75.36%), Postives = 120/138 (86.96%), Query Frame = 1 

		  

Query: 13  KVRCKEIKRVDALQSKGLAAKDVEFL-GSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEG 72
           +V+CKEIKRVDALQSKGL +KD E + G KS VCYSIEVKD YLPPWII ++C+AM SEG
Sbjct: 495 QVKCKEIKRVDALQSKGLVSKDGESIDGPKSGVCYSIEVKDPYLPPWIISAICSAMSSEG 554

Query: 73  RSFEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSY 132
           +S+EA F+TD N+ GLNAA+EAVSQ  N+NTDET GDSQEDTYTFGISAAV NSGL S+ 
Sbjct: 555 KSYEAIFVTDPNSAGLNAALEAVSQ--NSNTDETIGDSQEDTYTFGISAAVANSGLCSAS 614

Query: 133 LKAVKYSNGSYVAALSPV 150
           LKA+KYSNGSYVA+LSPV
Sbjct: 615 LKALKYSNGSYVASLSPV 630
[Close]
BLAST of Spo02383.1 vs. UniProtKB/TrEMBL
Match: D7TUE6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0017g01970 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.200e-31
Identity = 77/140 (55.00%), Postives = 99/140 (70.71%), Query Frame = 1 

		  

Query: 13  KVRCKEIKRVD--ALQSKGLAAKDVEFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSE 72
           +V C+E+KR D  A   KG   KD       + + YSIE+KDAY+PPWII S+CA MGSE
Sbjct: 495 EVSCRELKRADHVAFPLKGSKMKDEAIESVSAGLSYSIEIKDAYIPPWIISSICATMGSE 554

Query: 73  GRSFEASFLTDSNTMGLNAAIEAVSQKSNTNTDETTGDS-QEDTYTFGISAAVVNSGLYS 132
           GRSFEASF T+  ++GLNAA+E V QKS+T     TG++ QE TY FG+  AVV S ++S
Sbjct: 555 GRSFEASFTTEPTSIGLNAAVETVGQKSDTQA--ATGEAIQESTYAFGVPEAVVTSYMHS 614

Query: 133 SYLKAVKYSNGSYVAALSPV 150
           ++LK +KY+NGSY A LSPV
Sbjct: 615 AFLKGLKYANGSYTARLSPV 632
[Close]
BLAST of Spo02383.1 vs. TAIR (Arabidopsis)
Match: AT3G54750.3 (unknown protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.000e-16
Identity = 42/126 (33.33%), Postives = 76/126 (60.32%), Query Frame = 1 

		  

Query: 26  QSKGLAAKDV---EFLGSKSSVCYSIEVKDAYLPPWIICSLCAAMGSEGRSFEASFLTDS 85
           Q+  L++ ++   E + ++ + CY +E+K  Y+PPWII ++CA +G+ G++FEASF+T+ 
Sbjct: 464 QNAALSSPEIKCSEMVKTEHTSCYMVEIKGEYIPPWIISNICANVGANGQNFEASFVTEP 523

Query: 86  NTMGLNAAIEAVSQKSNTNTDETTGDSQEDTYTFGISAAVVNSGLYSSYLKAVKYSNGSY 145
            ++ LN  +  V +K++  +    G  + +     I  +V+   L S +LK +KY N SY
Sbjct: 524 TSVNLNIGLPQVPEKTDPESRVIEGTGETNDNASDIPGSVICPQLQSGHLKNLKYCNKSY 583

Query: 146 VAALSP 149
             +LSP
Sbjct: 584 TVSLSP 589
The following BLAST results are available for this feature:
BLAST of Spo02383.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902220388|gb|KNA18589.1|3.9e-67100.hypothetical protein SOVF_0691... [more]
gi|902197839|gb|KNA13534.1|3.4e-6394.1hypothetical protein SOVF_1158... [more]
gi|731333192|ref|XP_010677601.1|2.6e-4775.3PREDICTED: protein downstream ... [more]
gi|731333194|ref|XP_010677602.1|2.6e-4775.3PREDICTED: protein downstream ... [more]
gi|731384638|ref|XP_010648208.1|4.5e-3155.0PREDICTED: protein downstream ... [more]
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BLAST of Spo02383.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RI03_SPIOL2.7e-67100.Uncharacterized protein (Fragm... [more]
A0A0K9R3L1_SPIOL2.4e-6394.1Uncharacterized protein OS=Spi... [more]
A0A0J8CCT3_BETVU1.8e-4775.3Uncharacterized protein OS=Bet... [more]
A0A0J8CHL3_BETVU1.8e-4775.3Uncharacterized protein OS=Bet... [more]
D7TUE6_VITVI3.2e-3155.0Putative uncharacterized prote... [more]
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BLAST of Spo02383.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo02383.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G54750.32.0e-1633.3unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024861DonsonPANTHERPTHR12972DOWNSTREAM NEIGHBOR OF SONcoord: 13..149
score: 1.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006486 protein glycosylation
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0009249 protein lipoylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0009107 lipoate biosynthetic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006546 glycine catabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0009965 leaf morphogenesis
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005840 ribosome
cellular_component GO:0044446 intracellular organelle part
cellular_component GO:0005759 mitochondrial matrix
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity
molecular_function GO:0016992 lipoate synthase activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0005515 protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo046860.76Barchart | Table
Spo235270.73Barchart | Table
Spo173860.72Barchart | Table
Spo037160.72Barchart | Table
Spo123680.72Barchart | Table
Spo022310.71Barchart | Table
Spo233550.71Barchart | Table
Spo051270.71Barchart | Table
Spo104270.71Barchart | Table
Spo248900.71Barchart | Table
Spo192450.71Barchart | Table
Spo270040.70Barchart | Table
Spo236640.70Barchart | Table
Spo008120.69Barchart | Table
Spo204970.69Barchart | Table
Spo021750.69Barchart | Table
Spo240660.69Barchart | Table
Spo027470.69Barchart | Table
Spo268330.68Barchart | Table
Spo154240.68Barchart | Table
Spo099930.68Barchart | Table
Spo018400.68Barchart | Table
Spo036080.68Barchart | Table
Spo041320.68Barchart | Table
Spo226260.68Barchart | Table
Spo052710.68Barchart | Table
Spo213510.68Barchart | Table
Spo064640.68Barchart | Table
Spo064650.68Barchart | Table
Spo075860.68Barchart | Table
Spo273520.67Barchart | Table
Spo013560.67Barchart | Table
Spo015310.67Barchart | Table
Spo066810.67Barchart | Table
Spo067290.67Barchart | Table
Spo110150.67Barchart | Table
Spo121620.67Barchart | Table
Spo126630.67Barchart | Table
Spo131790.67Barchart | Table
Spo137060.67Barchart | Table
Spo163860.67Barchart | Table
Spo172350.67Barchart | Table
Spo177550.67Barchart | Table
Spo206000.67Barchart | Table
Spo211320.67Barchart | Table
Spo233200.67Barchart | Table
Spo259170.67Barchart | Table
Spo266370.67Barchart | Table
Spo268060.67Barchart | Table
Spo054870.66Barchart | Table
Spo235070.66Barchart | Table
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