Spo02410 (gene) | SpinachBase

Overview


Name	Spo02410
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Bet1-like SNARE 1-1 family protein
Location	chr5 : 2089083 .. 2093383 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAATGGAGTTTGTTTAAGGCATAAACAAAGGGTTAATCAAAAAGGGAAAACCTGATCTTCCTTTTTCAGGTAATGACTCATCATCACTCCTTCCACCCTTTCCCTCAATTTCGTCTTCAAATTCATTTTTCTTAAGATCCCAATTTCCCGTTCATAATTTGGTAAACCCTAAATCACACCCCCAAATCAATTTTTAAATTTATACGGAGTACCAAGTGTGTTTTTCTACTGATTGCTACGTTGTTATTCTTACTACGTTTTTCATTTTCTCTTTTTTCAGATCACTGAAAGCTTCGATCACTGATTACCTGCGCTGTTTTCTTGATCTCTTGCTCCATCTATGAATCCGAGAAGGTTTGCTTATTGATTTTTGGATTTCCTGTTGTTTTTTTGGGCTCAACTGATTGGTTTTATTGCTTATTTTCCCGTTTCCACAATTTTGTCGGCATTTCTGAAGTATGATTAGCGAGAGATTCAATTGGGAAGGGGGTTGTTGATTGATTGAATTCTGAAATTTTTGTTTTGATTTGAATCTTTTGTGGTGCTGAAGCTTTGAAGTTTAGAAATGTGATTCCTTCTATGTGTCATCAATTATCGAGCAATGTTGTGAACTGTATATCCGTGAAAAGGTCGAATGTTGTTCCGACTTTCTAGAATTGTCAGGGGTGGGATTTTGATAAGGATTTCCATGGTGCATGAAGGTAGTTGGTTTCTCATTGGATCATTTTGTTTTTCCTGATTGCAAGTAAAAGAGCTAATATTGTGCTAATTAACTGCTTGCTGATAGCTGGATCTGTAGAAAGAAACAATGGATAAACTATTAACCTCAAAAACTAAATTCCAAACCTGTTCCTGTATTCCCATATTGCTGTAATGGATAGCATATTAGCTTTTAGAACTATGGCAATGGCCTGGTTCTATCTGTGACGCTGTTGTCCATTAATGGAATGTCCAAAATTTTGCCTTCTGAGAGTTCCTGTGTCGTTCACACAATTACATTATACAAGTAATATTTAGTCAAATTACCGTGTTCCTTCCTTCGTGGGTTATGGAATTTGGTTGTACATCGTGCAAAACTTGTTCATGTGTTTGCATTAATGATAGCAAGGTCTGAGGATGCCTAGGAAGCTAGCTGTGCTGGTTTGAAGTTGACATTATATGATATCTATGAACGATGCAAAGATTACGAAGAATCTTTGTGGCATTCGAGTGATTAGTGAAGCTTTTTTATGTTAATTTAGACTTCTTTACAATGCCTGAATATATGATACATATGTATAAAAAGTTCAAGGTGCACCAAGGCGACAGCCGACAGGGGTCTTGATGTCTTGTTGCGCCAAAGTGTGCGTCATTGAAGTGAGACGCGCTGTATAAAGTTTAAAAAACCTAACTGAAGTGTGCCTCGTCACTTTAAGTGCACCTCAGGTGCCGCTTCTTTGAATGCGGCTCACCTAGAACTAAAAAAATGCTTACCCCCTAGCCTTGGCCCGTTTATCATACACTGTGTCTTACTATTAACATGTTCCCCTGAGCACGAGCCTTATTCCCCATATCGTTACAGATCAAGTTAGGTTCTGTTAGGGAATATTCTAACAAAAAATTTGGAGGCGTCGATGTTTTGAAGGGCTTAATGTTTACATTAGTTGTAAAATGATCTACTATCTCCTGCATCAGGGTGAATTGCAAGGAGGTAAAAGAAACCCCATAATGGTGTACGTGTTGCATGTTCTCACATGCTCTTCTGCTTTTTAAGACTTCTAATATTGAGCCAGAGTCTCAAGGCCCTCAAGACATCATTTGATGGCTTAACTTCATCTACCTTATATGATGTGCTGCAAGAACTGTATCCCTCAAAGAGCGGCTTATTTTGATGGTTTTCTTTGTTTATATTTCCACTCTACATGGAATCTTAACCTGACCTTCCCTTTGTTGCAGATTAAGTTTTGTGTTTTACCTGATAGATCTTTGTCTACTCCCTTGAATGTTTGTAATTTTGATGCTTTGTTGATCTCTTTTTTCCTTACTTAACGGCAGAAATGTTTTCATTGGTCATGGTCCTTTACATCTATAGCTAAAGCTTCCAACGATTTCTTGTTTGCTTGCAGGGATTATAGAGGCTCTAGAACTTCTGCTTTTGATGGCATTGAGGAGGGAGGTATCAGGGCCTCGTCCTCGTATTCCTCTCATGAAATTGATGAACATGACAATGATACAGCACTTGATGGATTGCAAGACAGAGTTAACCTTCTGAAAAGAGTATGTATTTTCTCCTTGGAGAATTGATTGCGTATCTGATTTGCTGCATCTTGGGGCTATGGCTACCTTAACCAGATCCCAATTAATTTATGTCACATTTTCATCCATCTAATGCACTCTTATTTGTGTATGAGTTTAGCTTTTTAGTTTATGTTTTTAACTTTAGGTCTGAAAACTGGTTTTCTTTGAAGAAAATGATTTTGATTTGTGAAAGCTAACGGTATGGTTACCTAATGGCCCTTAAGTCCTTAACTTCTTTTGTCTTCAAACTGCTGGCTTGTCTTTGTGTATCAGTGTATGCCCATGGAAAATTCTTGGGAATATTAGAAATTACAATGTCATTTAGTTGTTTTAGGTAACATTACCATGTGTCATGTAGCTAATGTGAAAGGCTCCTCCATCTCCAGCTTCCTAAGAATTGTATTTGGGTGATAAACATGCACTGGTAATGGAGTTGTTTTGACTCTATATATATCCCACTTTAATCCAGTCTAGAACACAACATAAAAAAGAACCTGGTTTTTGGGCAATTGCAAAATATGCGAAGTGGAAAATGCAGTCTAAGTGATAGGGACTTCCGGACTTGTATCCCTTGATGACTATTAGGCACTTATTCTTGACTACTGGGGAGACAAATGCAATTATGCCGTATTTATTCAGGACTTCGGAAGTTAGGAGGGATGTCAACTTTTGCAAACTACTACGTAGTACTGTTTTACCAACAACTAATAGAATTTGCTAGAGTTGTGTTGACTACTATAATTGTTACACCTAATTATAAATCTAGTGTGTCAACTTGCTGACCAAAGTAACTTTGGGGAGGAAAGTGGAATTATGCCACAATATCAAATTACCAATCTGTTCTCTAAGTTTTAATCTATGCCCAACATAGGTTATCTACTTCAATCTGTTCTCTAAGTTTTAATCTATGCCCAACATAGGTTATCTATTTCTATGCATACCTGAATTCAAGGCCTCTGCTAGGTTGTTCTTTTGCGTCCTTGTTTTTCTATTGTGCTTATATTCATTGACTTGTTCCATTGAAACTTAAAACCCATAATAATGGAGTCAAATAGGCGTGTTTTCTTAGACAACAAAATAAATGCAAAAGGTAAATGGTTACTTATCCCAAATGATGCACTTATTGATGATAAATATAGTAGCCAAAACTAATCTCTTGATTGGGTATTGTGCTACTCGTTGCAGTTAAGTGGTGACATAAATGAAGAAGTTGATGCTCATAACCGGATGTTGGATAGAATGGTATGTTTGTGATAATCACTCACTACTAGCTCCATATCTTGAATGGTATATGTAGTCATTTTGCTACCATATTGAGACTTTTACTTGAACTTATCAAATATACTCTTTTAGGGCAACGAGATGGATTCATCACGAGGATTCTTGTCAGGAACTGTGGATCGGTTTAAGCAGGTAAATTTGATATTCTTATGCATACTCCCTTATCGGCGCGTTTGGTAGCCGGCCATAAATGGTCTCAATGGGAATGAATTTGTATGTAAATTTGTAAGGAAAATCAATATCCATTCCCATGATAATGCTAGTTTACTCATAACAATCTCTTTTTCTTATAAATTTCCATTACCATTTGGGGAGTGGTTTTAGGTTGGAATGCAAATTTATGAAGAAAAAAACCAAGTTTGAGACCAAATCAGACTGTTTTGTGCTGACTAAATTTCCCCTTCTCACTTTGACAGGCATTCGAGACCAAATCAAGCAGACGAATGTTTACTCTTGTGGCCTCATTTGTGGTTCTTTTCCTTATTATCTACTATCTTACTAGGTAATCCCCCAAATAGCTAGAAATTGATACAACTCCAGGCTTTGTATCTGAATTGGGTTGCTAGTTCGAGTCTCTTCTTTCTCAGTTACCGTGTTTTTCACATGATATCGGTACATGCCAGATTGTAAAGAAATTATAAAGCTGTGATATGGGTACTTGAATGTATGAAGTTCTTTTGAGTGTGGTTTCAGATGTTTCCAGTTAAATGAATATATTTCTTGCCTTTTTTTTAGCTAAT

mRNA sequence

ATTTAATGGAGTTTGTTTAAGGCATAAACAAAGGGTTAATCAAAAAGGGAAAACCTGATCTTCCTTTTTCAGGTAATGACTCATCATCACTCCTTCCACCCTTTCCCTCAATTTCGTCTTCAAATTCATTTTTCTTAAGATCCCAATTTCCCGTTCATAATTTGATCACTGAAAGCTTCGATCACTGATTACCTGCGCTGTTTTCTTGATCTCTTGCTCCATCTATGAATCCGAGAAGGGATTATAGAGGCTCTAGAACTTCTGCTTTTGATGGCATTGAGGAGGGAGGTATCAGGGCCTCGTCCTCGTATTCCTCTCATGAAATTGATGAACATGACAATGATACAGCACTTGATGGATTGCAAGACAGAGTTAACCTTCTGAAAAGATTAAGTGGTGACATAAATGAAGAAGTTGATGCTCATAACCGGATGTTGGATAGAATGGGCAACGAGATGGATTCATCACGAGGATTCTTGTCAGGAACTGTGGATCGGTTTAAGCAGGCATTCGAGACCAAATCAAGCAGACGAATGTTTACTCTTGTGGCCTCATTTGTGGTTCTTTTCCTTATTATCTACTATCTTACTAGGTAATCCCCCAAATAGCTAGAAATTGATACAACTCCAGGCTTTGTATCTGAATTGGGTTGCTAGTTCGAGTCTCTTCTTTCTCAGTTACCGTGTTTTTCACATGATATCGGTACATGCCAGATTGTAAAGAAATTATAAAGCTGTGATATGGGTACTTGAATGTATGAAGTTCTTTTGAGTGTGGTTTCAGATGTTTCCAGTTAAATGAATATATTTCTTGCCTTTTTTTTAGCTAAT

Coding sequence (CDS)

ATGAATCCGAGAAGGGATTATAGAGGCTCTAGAACTTCTGCTTTTGATGGCATTGAGGAGGGAGGTATCAGGGCCTCGTCCTCGTATTCCTCTCATGAAATTGATGAACATGACAATGATACAGCACTTGATGGATTGCAAGACAGAGTTAACCTTCTGAAAAGATTAAGTGGTGACATAAATGAAGAAGTTGATGCTCATAACCGGATGTTGGATAGAATGGGCAACGAGATGGATTCATCACGAGGATTCTTGTCAGGAACTGTGGATCGGTTTAAGCAGGCATTCGAGACCAAATCAAGCAGACGAATGTTTACTCTTGTGGCCTCATTTGTGGTTCTTTTCCTTATTATCTACTATCTTACTAGGTAA

Protein sequence

MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDINEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYYLTR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo02410.1	Spo02410.1	mRNA

Homology

[Close]

BLAST of Spo02410.1 vs. NCBI nr
Match: gi|902202425|gb|KNA14273.1| (hypothetical protein SOVF_108900 [Spinacia oleracea])

HSP 1 Score: 236.9 bits (603), Expect = 1.900e-59
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI
Sbjct: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY
Sbjct: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Spo02410.1 vs. NCBI nr
Match: gi|731336362|ref|XP_010679212.1| (PREDICTED: bet1-like SNARE 1-1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 220.7 bits (561), Expect = 1.400e-54
Identity = 112/123 (91.06%), Postives = 119/123 (96.75%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+YRGSR +AFDGIEEGGIRAS SYSSHEIDEHDND ALDGLQDRVNLLKRLSGD+
Sbjct: 1   MNPRREYRGSRVNAFDGIEEGGIRASPSYSSHEIDEHDNDRALDGLQDRVNLLKRLSGDV 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEVDAHNRMLDRMGNEMD+SRGFLSGT+DRFKQAFETKSSRRM TLVASFVVLFLI+YY
Sbjct: 61  HEEVDAHNRMLDRMGNEMDASRGFLSGTMDRFKQAFETKSSRRMLTLVASFVVLFLIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Spo02410.1 vs. NCBI nr
Match: gi|225437830|ref|XP_002262985.1| (PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera])

HSP 1 Score: 203.8 bits (517), Expect = 1.800e-49
Identity = 102/123 (82.93%), Postives = 116/123 (94.31%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRDYRG+R + FDGIEEGGIRASSSYSSHEIDEHDN+ A+DGLQDRVNLLKRL+GDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEV++HNRMLDR+GN+MD+SRG LSGT+DRFK  FET+SSRRMFTLVASFVV+FLIIYY
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRRMFTLVASFVVIFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Spo02410.1 vs. NCBI nr
Match: gi|729291342|ref|XP_010551548.1| (PREDICTED: bet1-like SNARE 1-1 [Tarenaya hassleriana])

HSP 1 Score: 201.8 bits (512), Expect = 6.800e-49
Identity = 103/123 (83.74%), Postives = 113/123 (91.87%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRRD+RG+R+S FDGIEEGGIRA+ SYS HEIDEHDN+ ALDGLQDRVNLLKRLSGDI
Sbjct: 1   MNPRRDHRGTRSSVFDGIEEGGIRAAPSYS-HEIDEHDNERALDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEV+ HNRMLDRMGN+MDSSRG LSGT+DRFK  FETKSSRRM TLVASFV LFL++YY
Sbjct: 61  NEEVETHNRMLDRMGNDMDSSRGILSGTMDRFKTVFETKSSRRMLTLVASFVALFLVVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122

[Close]

BLAST of Spo02410.1 vs. NCBI nr
Match: gi|702263921|ref|XP_010038985.1| (PREDICTED: bet1-like SNARE 1-1 [Eucalyptus grandis])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-48
Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRD RG+R + FDGIEEGGIRASSSYSSHEIDEH+N+ A+DGLQDRVNLLKRLSGDI
Sbjct: 1   MNTRRDVRGNRAALFDGIEEGGIRASSSYSSHEIDEHENERAMDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEV+ HNRMLD MGNEMD+SRG LSGT+DRFK  FETKSSRRMF+LVASFVV+FL++YY
Sbjct: 61  NEEVETHNRMLDGMGNEMDASRGVLSGTMDRFKMVFETKSSRRMFSLVASFVVIFLVVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R438_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108900 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.300e-59
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI
Sbjct: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY
Sbjct: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3K4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120810 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.800e-55
Identity = 112/123 (91.06%), Postives = 119/123 (96.75%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+YRGSR +AFDGIEEGGIRAS SYSSHEIDEHDND ALDGLQDRVNLLKRLSGD+
Sbjct: 1   MNPRREYRGSRVNAFDGIEEGGIRASPSYSSHEIDEHDNDRALDGLQDRVNLLKRLSGDV 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEVDAHNRMLDRMGNEMD+SRGFLSGT+DRFKQAFETKSSRRM TLVASFVVLFLI+YY
Sbjct: 61  HEEVDAHNRMLDRMGNEMDASRGFLSGTMDRFKQAFETKSSRRMLTLVASFVVLFLIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: D7U2W9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02990 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.200e-49
Identity = 102/123 (82.93%), Postives = 116/123 (94.31%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRDYRG+R + FDGIEEGGIRASSSYSSHEIDEHDN+ A+DGLQDRVNLLKRL+GDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEV++HNRMLDR+GN+MD+SRG LSGT+DRFK  FET+SSRRMFTLVASFVV+FLIIYY
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRRMFTLVASFVVIFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: A0A059D2I5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01517 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 8.100e-49
Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRD RG+R + FDGIEEGGIRASSSYSSHEIDEH+N+ A+DGLQDRVNLLKRLSGDI
Sbjct: 1   MNTRRDVRGNRAALFDGIEEGGIRASSSYSSHEIDEHENERAMDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEV+ HNRMLD MGNEMD+SRG LSGT+DRFK  FETKSSRRMF+LVASFVV+FL++YY
Sbjct: 61  NEEVETHNRMLDGMGNEMDASRGVLSGTMDRFKMVFETKSSRRMFSLVASFVVIFLVVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: V4U4K5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022892mg PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.100e-48
Identity = 102/123 (82.93%), Postives = 113/123 (91.87%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRDYR S+ + FDGIEEGGIRASSSYS HEIDEHDN+ AL+GLQDRVNLLKRLSGDI
Sbjct: 1   MNSRRDYRNSKVALFDGIEEGGIRASSSYS-HEIDEHDNERALEGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVD HNRML+RMGN+MD+SRG LSGT+D+FK  FETKSSRRMFTLVASFVV+FLI+YY
Sbjct: 61  NEEVDTHNRMLERMGNDMDASRGVLSGTMDKFKMVFETKSSRRMFTLVASFVVIFLIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122

[Close]

BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
Match: BET11_ARATH (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 8.800e-49
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+ RG R+S FDGIEEGGIRA+SSYS HEI+EH+N+ AL+GLQDRV LLKRLSGDI
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYS-HEINEHENERALEGLQDRVILLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVD HNRMLDRMGN+MDSSRGFLSGT+DRFK  FETKSSRRM TLVASFV LFL+IYY
Sbjct: 61  NEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122

[Close]

BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
Match: BET12_ARATH (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4)

HSP 1 Score: 141.7 bits (356), Expect = 5.200e-33
Identity = 77/126 (61.11%), Postives = 100/126 (79.37%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAF---DGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLS 60
           MN RR+ R SRTS F   DG+EEG +RASSSY+    DE DND AL+ LQDRV+ LKR++
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVT 60

Query: 61  GDINEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLI 120
           GDI+EEV+ HNR+LD++GN+MDS+RG +SGT++RFK  FE KS+R+   L+A FV+LFLI
Sbjct: 61  GDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLI 120

Query: 121 IYYLTR 124
           +YYL R
Sbjct: 121 MYYLIR 123

[Close]

BLAST of Spo02410.1 vs. TAIR (Arabidopsis)
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A)

HSP 1 Score: 194.1 bits (492), Expect = 5.000e-50
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+ RG R+S FDGIEEGGIRA+SSYS HEI+EH+N+ AL+GLQDRV LLKRLSGDI
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYS-HEINEHENERALEGLQDRVILLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVD HNRMLDRMGN+MDSSRGFLSGT+DRFK  FETKSSRRM TLVASFV LFL+IYY
Sbjct: 61  NEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122

[Close]

BLAST of Spo02410.1 vs. TAIR (Arabidopsis)
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein)

HSP 1 Score: 141.7 bits (356), Expect = 2.900e-34
Identity = 77/126 (61.11%), Postives = 100/126 (79.37%), Query Frame = 1

		  
Query: 1   MNPRRDYRGSRTSAF---DGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLS 60
           MN RR+ R SRTS F   DG+EEG +RASSSY+    DE DND AL+ LQDRV+ LKR++
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVT 60

Query: 61  GDINEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLI 120
           GDI+EEV+ HNR+LD++GN+MDS+RG +SGT++RFK  FE KS+R+   L+A FV+LFLI
Sbjct: 61  GDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLI 120

Query: 121 IYYLTR 124
           +YYL R
Sbjct: 121 MYYLIR 123

The following BLAST results are available for this feature:

BLAST of Spo02410.1 vs. NCBI nr
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
BLAST of Spo02410.1 vs. TAIR (Arabidopsis)

BLAST of Spo02410.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902202425\|gb\|KNA14273.1\|	1.9e-59	100.	hypothetical protein SOVF_1089...	[more]
gi\|731336362\|ref\|XP_010679212.1\|	1.4e-54	91.0	PREDICTED: bet1-like SNARE 1-1...	[more]
gi\|225437830\|ref\|XP_002262985.1\|	1.8e-49	82.9	PREDICTED: bet1-like SNARE 1-1...	[more]
gi\|729291342\|ref\|XP_010551548.1\|	6.8e-49	83.7	PREDICTED: bet1-like SNARE 1-1...	[more]
gi\|702263921\|ref\|XP_010038985.1\|	1.2e-48	82.1	PREDICTED: bet1-like SNARE 1-1...	[more]

BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9R438_SPIOL	1.3e-59	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8F3K4_BETVU	9.8e-55	91.0	Uncharacterized protein OS=Bet...	[more]
D7U2W9_VITVI	1.2e-49	82.9	Putative uncharacterized prote...	[more]
A0A059D2I5_EUCGR	8.1e-49	82.1	Uncharacterized protein OS=Euc...	[more]
V4U4K5_9ROSI	3.1e-48	82.9	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
BET11_ARATH	8.8e-49	82.9	Bet1-like SNARE 1-1 OS=Arabido...	[more]
BET12_ARATH	5.2e-33	61.1	Bet1-like SNARE 1-2 OS=Arabido...	[more]

BLAST of Spo02410.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G58170.1	5.0e-50	82.9	BET1P/SFT1P-like protein 14A	[more]
AT4G14455.1	2.9e-34	61.1	Target SNARE coiled-coil domai...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 28..95 score: 1.
IPR000727	Target SNARE coiled-coil homology domain	PROFILE	PS50192	T_SNARE	coord: 33..95 score: 12
None	No IPR available	GENE3D	1.20.5.110		coord: 30..94 score: 1.1
None	No IPR available	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 1..123 score: 1.0
None	No IPR available	PANTHER	PTHR12791:SF34	SUBFAMILY NOT NAMED	coord: 1..123 score: 1.0
None	No IPR available	unknown	SSF58038	SNARE fusion complex	coord: 29..93 score: 2.22

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0010050	vegetative phase change
biological_process	GO:0006366	transcription by RNA polymerase II
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0006346	methylation-dependent chromatin silencing
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0010073	meristem maintenance
biological_process	GO:0010014	meristem initiation
biological_process	GO:0048439	flower morphogenesis
biological_process	GO:0006260	DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0061025	membrane fusion
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009887	animal organ morphogenesis
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0016049	cell growth
biological_process	GO:0006833	water transport
biological_process	GO:0019932	second-messenger-mediated signaling
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0019307	mannose biosynthetic process
biological_process	GO:0019853	L-ascorbic acid biosynthetic process
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009298	GDP-mannose biosynthetic process
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0006306	DNA methylation
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0009987	cellular process
biological_process	GO:0016043	cellular component organization
biological_process	GO:0008152	metabolic process
biological_process	GO:0006721	terpenoid metabolic process
biological_process	GO:0072593	reactive oxygen species metabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0046520	sphingoid biosynthetic process
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005768	endosome
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0055029	nuclear DNA-directed RNA polymerase complex
cellular_component	GO:0005773	vacuole
cellular_component	GO:0032580	Golgi cisterna membrane
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005719	nuclear euchromatin
cellular_component	GO:0035101	FACT complex
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0031461	cullin-RING ubiquitin ligase complex
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0004615	phosphomannomutase activity
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo26640	0.83	Barchart \| Table
Spo02013	0.77	Barchart \| Table
Spo08511	0.77	Barchart \| Table
Spo20852	0.76	Barchart \| Table
Spo10164	0.76	Barchart \| Table
Spo00783	0.76	Barchart \| Table
Spo16769	0.75	Barchart \| Table
Spo25013	0.75	Barchart \| Table
Spo01590	0.75	Barchart \| Table
Spo11190	0.74	Barchart \| Table
Spo13514	0.74	Barchart \| Table
Spo20826	0.73	Barchart \| Table
Spo22659	0.73	Barchart \| Table
Spo23930	0.73	Barchart \| Table
Spo17677	0.73	Barchart \| Table
Spo07441	0.73	Barchart \| Table
Spo14172	0.73	Barchart \| Table
Spo03950	0.73	Barchart \| Table
Spo10551	0.73	Barchart \| Table
Spo08884	0.73	Barchart \| Table
Spo08982	0.72	Barchart \| Table
Spo12659	0.72	Barchart \| Table
Spo16689	0.72	Barchart \| Table
Spo07415	0.72	Barchart \| Table
Spo00389	0.72	Barchart \| Table
Spo10550	0.71	Barchart \| Table
Spo16529	0.71	Barchart \| Table
Spo00169	0.71	Barchart \| Table
Spo06358	0.71	Barchart \| Table
Spo24232	0.71	Barchart \| Table
Spo12749	0.71	Barchart \| Table
Spo18694	0.71	Barchart \| Table
Spo22146	0.71	Barchart \| Table
Spo03730	0.70	Barchart \| Table
Spo00536	0.70	Barchart \| Table
Spo03865	0.70	Barchart \| Table
Spo09559	0.70	Barchart \| Table
Spo11355	0.70	Barchart \| Table
Spo15012	0.70	Barchart \| Table
Spo15529	0.70	Barchart \| Table
Spo16881	0.70	Barchart \| Table
Spo20693	0.70	Barchart \| Table
Spo21628	0.70	Barchart \| Table
Spo22970	0.70	Barchart \| Table
Spo24654	0.70	Barchart \| Table
Spo25568	0.70	Barchart \| Table
Spo02115	0.69	Barchart \| Table
Spo00397	0.69	Barchart \| Table
Spo22859	0.69	Barchart \| Table
Spo18016	0.69	Barchart \| Table
Spo01146	0.69	Barchart \| Table
Spo12509	0.69	Barchart \| Table
Spo21828	0.69	Barchart \| Table
Spo21831	0.69	Barchart \| Table
Spo11287	0.69	Barchart \| Table
Spo10960	0.69	Barchart \| Table
Spo13535	0.69	Barchart \| Table
Spo09842	0.69	Barchart \| Table
Spo10399	0.69	Barchart \| Table
Spo01731	0.68	Barchart \| Table
Spo11482	0.68	Barchart \| Table
Spo19287	0.68	Barchart \| Table
Spo19347	0.68	Barchart \| Table
Spo11554	0.68	Barchart \| Table
Spo19554	0.68	Barchart \| Table
Spo01043	0.68	Barchart \| Table
Spo21149	0.68	Barchart \| Table
Spo22458	0.68	Barchart \| Table
Spo07694	0.68	Barchart \| Table
Spo23115	0.68	Barchart \| Table
Spo05271	0.68	Barchart \| Table
Spo14084	0.68	Barchart \| Table
Spo09350	0.68	Barchart \| Table
Spo10940	0.68	Barchart \| Table
Spo11021	0.68	Barchart \| Table
Spo05086	0.68	Barchart \| Table
Spo15874	0.68	Barchart \| Table
Spo03002	0.68	Barchart \| Table
Spo16796	0.68	Barchart \| Table
Spo16896	0.68	Barchart \| Table
Spo08726	0.68	Barchart \| Table
Spo12660	0.67	Barchart \| Table
Spo03895	0.67	Barchart \| Table
Spo03735	0.67	Barchart \| Table
Spo05192	0.67	Barchart \| Table
Spo26690	0.67	Barchart \| Table
Spo09111	0.67	Barchart \| Table
Spo06569	0.67	Barchart \| Table
Spo16759	0.67	Barchart \| Table
Spo07079	0.67	Barchart \| Table
Spo14589	0.67	Barchart \| Table
Spo10706	0.67	Barchart \| Table
Spo02848	0.67	Barchart \| Table
Spo20197	0.67	Barchart \| Table
Spo17123	0.67	Barchart \| Table
Spo21967	0.67	Barchart \| Table
Spo05948	0.67	Barchart \| Table
Spo01048	0.67	Barchart \| Table
Spo08603	0.67	Barchart \| Table
Spo06291	0.67	Barchart \| Table
Spo21599	0.67	Barchart \| Table
Spo07015	0.67	Barchart \| Table
Spo22851	0.67	Barchart \| Table
Spo11993	0.67	Barchart \| Table
Spo17784	0.67	Barchart \| Table
Spo17154	0.67	Barchart \| Table
Spo25945	0.67	Barchart \| Table
Spo23434	0.67	Barchart \| Table
Spo03152	0.67	Barchart \| Table
Spo08327	0.66	Barchart \| Table
Spo05725	0.66	Barchart \| Table
Spo08613	0.66	Barchart \| Table
Spo05670	0.66	Barchart \| Table
Spo25302	0.66	Barchart \| Table
Spo10083	0.66	Barchart \| Table
Spo05341	0.66	Barchart \| Table
Spo10595	0.66	Barchart \| Table
Spo10618	0.66	Barchart \| Table
Spo25506	0.66	Barchart \| Table
Spo11680	0.66	Barchart \| Table
Spo12397	0.66	Barchart \| Table
Spo12657	0.66	Barchart \| Table
Spo12658	0.66	Barchart \| Table
Spo04279	0.66	Barchart \| Table
Spo13534	0.66	Barchart \| Table
Spo13976	0.66	Barchart \| Table
Spo03648	0.66	Barchart \| Table
Spo14980	0.66	Barchart \| Table
Spo15003	0.66	Barchart \| Table
Spo27365	0.66	Barchart \| Table
Spo15420	0.66	Barchart \| Table
Spo25732	0.66	Barchart \| Table
Spo25936	0.66	Barchart \| Table
Spo17024	0.66	Barchart \| Table
Spo18961	0.66	Barchart \| Table
Spo19491	0.66	Barchart \| Table
Spo20609	0.66	Barchart \| Table
Spo01552	0.66	Barchart \| Table
Spo26393	0.66	Barchart \| Table
Spo22047	0.66	Barchart \| Table
Spo01507	0.66	Barchart \| Table
Spo22780	0.66	Barchart \| Table
Spo23156	0.66	Barchart \| Table
Spo23908	0.66	Barchart \| Table
Spo24982	0.66	Barchart \| Table
Spo06962	0.66	Barchart \| Table
Spo07291	0.66	Barchart \| Table
Spo06022	0.66	Barchart \| Table
Spo20289	0.65	Barchart \| Table
Spo08355	0.65	Barchart \| Table
Spo00579	0.65	Barchart \| Table
Spo18453	0.65	Barchart \| Table
Spo02347	0.65	Barchart \| Table
Spo12423	0.65	Barchart \| Table
Spo15805	0.65	Barchart \| Table
Spo14468	0.65	Barchart \| Table
Spo23580	0.65	Barchart \| Table
Spo23887	0.65	Barchart \| Table
Spo05467	0.65	Barchart \| Table
Spo22052	0.65	Barchart \| Table
Spo20696	0.65	Barchart \| Table