Spo02410 (gene)

Overview
NameSpo02410
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBet1-like SNARE 1-1 family protein
Locationchr5 : 2089083 .. 2093383 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAATGGAGTTTGTTTAAGGCATAAACAAAGGGTTAATCAAAAAGGGAAAACCTGATCTTCCTTTTTCAGGTAATGACTCATCATCACTCCTTCCACCCTTTCCCTCAATTTCGTCTTCAAATTCATTTTTCTTAAGATCCCAATTTCCCGTTCATAATTTGGTAAACCCTAAATCACACCCCCAAATCAATTTTTAAATTTATACGGAGTACCAAGTGTGTTTTTCTACTGATTGCTACGTTGTTATTCTTACTACGTTTTTCATTTTCTCTTTTTTCAGATCACTGAAAGCTTCGATCACTGATTACCTGCGCTGTTTTCTTGATCTCTTGCTCCATCTATGAATCCGAGAAGGTTTGCTTATTGATTTTTGGATTTCCTGTTGTTTTTTTGGGCTCAACTGATTGGTTTTATTGCTTATTTTCCCGTTTCCACAATTTTGTCGGCATTTCTGAAGTATGATTAGCGAGAGATTCAATTGGGAAGGGGGTTGTTGATTGATTGAATTCTGAAATTTTTGTTTTGATTTGAATCTTTTGTGGTGCTGAAGCTTTGAAGTTTAGAAATGTGATTCCTTCTATGTGTCATCAATTATCGAGCAATGTTGTGAACTGTATATCCGTGAAAAGGTCGAATGTTGTTCCGACTTTCTAGAATTGTCAGGGGTGGGATTTTGATAAGGATTTCCATGGTGCATGAAGGTAGTTGGTTTCTCATTGGATCATTTTGTTTTTCCTGATTGCAAGTAAAAGAGCTAATATTGTGCTAATTAACTGCTTGCTGATAGCTGGATCTGTAGAAAGAAACAATGGATAAACTATTAACCTCAAAAACTAAATTCCAAACCTGTTCCTGTATTCCCATATTGCTGTAATGGATAGCATATTAGCTTTTAGAACTATGGCAATGGCCTGGTTCTATCTGTGACGCTGTTGTCCATTAATGGAATGTCCAAAATTTTGCCTTCTGAGAGTTCCTGTGTCGTTCACACAATTACATTATACAAGTAATATTTAGTCAAATTACCGTGTTCCTTCCTTCGTGGGTTATGGAATTTGGTTGTACATCGTGCAAAACTTGTTCATGTGTTTGCATTAATGATAGCAAGGTCTGAGGATGCCTAGGAAGCTAGCTGTGCTGGTTTGAAGTTGACATTATATGATATCTATGAACGATGCAAAGATTACGAAGAATCTTTGTGGCATTCGAGTGATTAGTGAAGCTTTTTTATGTTAATTTAGACTTCTTTACAATGCCTGAATATATGATACATATGTATAAAAAGTTCAAGGTGCACCAAGGCGACAGCCGACAGGGGTCTTGATGTCTTGTTGCGCCAAAGTGTGCGTCATTGAAGTGAGACGCGCTGTATAAAGTTTAAAAAACCTAACTGAAGTGTGCCTCGTCACTTTAAGTGCACCTCAGGTGCCGCTTCTTTGAATGCGGCTCACCTAGAACTAAAAAAATGCTTACCCCCTAGCCTTGGCCCGTTTATCATACACTGTGTCTTACTATTAACATGTTCCCCTGAGCACGAGCCTTATTCCCCATATCGTTACAGATCAAGTTAGGTTCTGTTAGGGAATATTCTAACAAAAAATTTGGAGGCGTCGATGTTTTGAAGGGCTTAATGTTTACATTAGTTGTAAAATGATCTACTATCTCCTGCATCAGGGTGAATTGCAAGGAGGTAAAAGAAACCCCATAATGGTGTACGTGTTGCATGTTCTCACATGCTCTTCTGCTTTTTAAGACTTCTAATATTGAGCCAGAGTCTCAAGGCCCTCAAGACATCATTTGATGGCTTAACTTCATCTACCTTATATGATGTGCTGCAAGAACTGTATCCCTCAAAGAGCGGCTTATTTTGATGGTTTTCTTTGTTTATATTTCCACTCTACATGGAATCTTAACCTGACCTTCCCTTTGTTGCAGATTAAGTTTTGTGTTTTACCTGATAGATCTTTGTCTACTCCCTTGAATGTTTGTAATTTTGATGCTTTGTTGATCTCTTTTTTCCTTACTTAACGGCAGAAATGTTTTCATTGGTCATGGTCCTTTACATCTATAGCTAAAGCTTCCAACGATTTCTTGTTTGCTTGCAGGGATTATAGAGGCTCTAGAACTTCTGCTTTTGATGGCATTGAGGAGGGAGGTATCAGGGCCTCGTCCTCGTATTCCTCTCATGAAATTGATGAACATGACAATGATACAGCACTTGATGGATTGCAAGACAGAGTTAACCTTCTGAAAAGAGTATGTATTTTCTCCTTGGAGAATTGATTGCGTATCTGATTTGCTGCATCTTGGGGCTATGGCTACCTTAACCAGATCCCAATTAATTTATGTCACATTTTCATCCATCTAATGCACTCTTATTTGTGTATGAGTTTAGCTTTTTAGTTTATGTTTTTAACTTTAGGTCTGAAAACTGGTTTTCTTTGAAGAAAATGATTTTGATTTGTGAAAGCTAACGGTATGGTTACCTAATGGCCCTTAAGTCCTTAACTTCTTTTGTCTTCAAACTGCTGGCTTGTCTTTGTGTATCAGTGTATGCCCATGGAAAATTCTTGGGAATATTAGAAATTACAATGTCATTTAGTTGTTTTAGGTAACATTACCATGTGTCATGTAGCTAATGTGAAAGGCTCCTCCATCTCCAGCTTCCTAAGAATTGTATTTGGGTGATAAACATGCACTGGTAATGGAGTTGTTTTGACTCTATATATATCCCACTTTAATCCAGTCTAGAACACAACATAAAAAAGAACCTGGTTTTTGGGCAATTGCAAAATATGCGAAGTGGAAAATGCAGTCTAAGTGATAGGGACTTCCGGACTTGTATCCCTTGATGACTATTAGGCACTTATTCTTGACTACTGGGGAGACAAATGCAATTATGCCGTATTTATTCAGGACTTCGGAAGTTAGGAGGGATGTCAACTTTTGCAAACTACTACGTAGTACTGTTTTACCAACAACTAATAGAATTTGCTAGAGTTGTGTTGACTACTATAATTGTTACACCTAATTATAAATCTAGTGTGTCAACTTGCTGACCAAAGTAACTTTGGGGAGGAAAGTGGAATTATGCCACAATATCAAATTACCAATCTGTTCTCTAAGTTTTAATCTATGCCCAACATAGGTTATCTACTTCAATCTGTTCTCTAAGTTTTAATCTATGCCCAACATAGGTTATCTATTTCTATGCATACCTGAATTCAAGGCCTCTGCTAGGTTGTTCTTTTGCGTCCTTGTTTTTCTATTGTGCTTATATTCATTGACTTGTTCCATTGAAACTTAAAACCCATAATAATGGAGTCAAATAGGCGTGTTTTCTTAGACAACAAAATAAATGCAAAAGGTAAATGGTTACTTATCCCAAATGATGCACTTATTGATGATAAATATAGTAGCCAAAACTAATCTCTTGATTGGGTATTGTGCTACTCGTTGCAGTTAAGTGGTGACATAAATGAAGAAGTTGATGCTCATAACCGGATGTTGGATAGAATGGTATGTTTGTGATAATCACTCACTACTAGCTCCATATCTTGAATGGTATATGTAGTCATTTTGCTACCATATTGAGACTTTTACTTGAACTTATCAAATATACTCTTTTAGGGCAACGAGATGGATTCATCACGAGGATTCTTGTCAGGAACTGTGGATCGGTTTAAGCAGGTAAATTTGATATTCTTATGCATACTCCCTTATCGGCGCGTTTGGTAGCCGGCCATAAATGGTCTCAATGGGAATGAATTTGTATGTAAATTTGTAAGGAAAATCAATATCCATTCCCATGATAATGCTAGTTTACTCATAACAATCTCTTTTTCTTATAAATTTCCATTACCATTTGGGGAGTGGTTTTAGGTTGGAATGCAAATTTATGAAGAAAAAAACCAAGTTTGAGACCAAATCAGACTGTTTTGTGCTGACTAAATTTCCCCTTCTCACTTTGACAGGCATTCGAGACCAAATCAAGCAGACGAATGTTTACTCTTGTGGCCTCATTTGTGGTTCTTTTCCTTATTATCTACTATCTTACTAGGTAATCCCCCAAATAGCTAGAAATTGATACAACTCCAGGCTTTGTATCTGAATTGGGTTGCTAGTTCGAGTCTCTTCTTTCTCAGTTACCGTGTTTTTCACATGATATCGGTACATGCCAGATTGTAAAGAAATTATAAAGCTGTGATATGGGTACTTGAATGTATGAAGTTCTTTTGAGTGTGGTTTCAGATGTTTCCAGTTAAATGAATATATTTCTTGCCTTTTTTTTAGCTAAT

mRNA sequence

ATTTAATGGAGTTTGTTTAAGGCATAAACAAAGGGTTAATCAAAAAGGGAAAACCTGATCTTCCTTTTTCAGGTAATGACTCATCATCACTCCTTCCACCCTTTCCCTCAATTTCGTCTTCAAATTCATTTTTCTTAAGATCCCAATTTCCCGTTCATAATTTGATCACTGAAAGCTTCGATCACTGATTACCTGCGCTGTTTTCTTGATCTCTTGCTCCATCTATGAATCCGAGAAGGGATTATAGAGGCTCTAGAACTTCTGCTTTTGATGGCATTGAGGAGGGAGGTATCAGGGCCTCGTCCTCGTATTCCTCTCATGAAATTGATGAACATGACAATGATACAGCACTTGATGGATTGCAAGACAGAGTTAACCTTCTGAAAAGATTAAGTGGTGACATAAATGAAGAAGTTGATGCTCATAACCGGATGTTGGATAGAATGGGCAACGAGATGGATTCATCACGAGGATTCTTGTCAGGAACTGTGGATCGGTTTAAGCAGGCATTCGAGACCAAATCAAGCAGACGAATGTTTACTCTTGTGGCCTCATTTGTGGTTCTTTTCCTTATTATCTACTATCTTACTAGGTAATCCCCCAAATAGCTAGAAATTGATACAACTCCAGGCTTTGTATCTGAATTGGGTTGCTAGTTCGAGTCTCTTCTTTCTCAGTTACCGTGTTTTTCACATGATATCGGTACATGCCAGATTGTAAAGAAATTATAAAGCTGTGATATGGGTACTTGAATGTATGAAGTTCTTTTGAGTGTGGTTTCAGATGTTTCCAGTTAAATGAATATATTTCTTGCCTTTTTTTTAGCTAAT

Coding sequence (CDS)

ATGAATCCGAGAAGGGATTATAGAGGCTCTAGAACTTCTGCTTTTGATGGCATTGAGGAGGGAGGTATCAGGGCCTCGTCCTCGTATTCCTCTCATGAAATTGATGAACATGACAATGATACAGCACTTGATGGATTGCAAGACAGAGTTAACCTTCTGAAAAGATTAAGTGGTGACATAAATGAAGAAGTTGATGCTCATAACCGGATGTTGGATAGAATGGGCAACGAGATGGATTCATCACGAGGATTCTTGTCAGGAACTGTGGATCGGTTTAAGCAGGCATTCGAGACCAAATCAAGCAGACGAATGTTTACTCTTGTGGCCTCATTTGTGGTTCTTTTCCTTATTATCTACTATCTTACTAGGTAA

Protein sequence

MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDINEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYYLTR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02410.1Spo02410.1mRNA


Homology
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|902202425|gb|KNA14273.1| (hypothetical protein SOVF_108900 [Spinacia oleracea])

HSP 1 Score: 236.9 bits (603), Expect = 1.900e-59
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI
Sbjct: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY
Sbjct: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|731336362|ref|XP_010679212.1| (PREDICTED: bet1-like SNARE 1-1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 220.7 bits (561), Expect = 1.400e-54
Identity = 112/123 (91.06%), Postives = 119/123 (96.75%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+YRGSR +AFDGIEEGGIRAS SYSSHEIDEHDND ALDGLQDRVNLLKRLSGD+
Sbjct: 1   MNPRREYRGSRVNAFDGIEEGGIRASPSYSSHEIDEHDNDRALDGLQDRVNLLKRLSGDV 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEVDAHNRMLDRMGNEMD+SRGFLSGT+DRFKQAFETKSSRRM TLVASFVVLFLI+YY
Sbjct: 61  HEEVDAHNRMLDRMGNEMDASRGFLSGTMDRFKQAFETKSSRRMLTLVASFVVLFLIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|225437830|ref|XP_002262985.1| (PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera])

HSP 1 Score: 203.8 bits (517), Expect = 1.800e-49
Identity = 102/123 (82.93%), Postives = 116/123 (94.31%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRDYRG+R + FDGIEEGGIRASSSYSSHEIDEHDN+ A+DGLQDRVNLLKRL+GDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEV++HNRMLDR+GN+MD+SRG LSGT+DRFK  FET+SSRRMFTLVASFVV+FLIIYY
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRRMFTLVASFVVIFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|729291342|ref|XP_010551548.1| (PREDICTED: bet1-like SNARE 1-1 [Tarenaya hassleriana])

HSP 1 Score: 201.8 bits (512), Expect = 6.800e-49
Identity = 103/123 (83.74%), Postives = 113/123 (91.87%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRRD+RG+R+S FDGIEEGGIRA+ SYS HEIDEHDN+ ALDGLQDRVNLLKRLSGDI
Sbjct: 1   MNPRRDHRGTRSSVFDGIEEGGIRAAPSYS-HEIDEHDNERALDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEV+ HNRMLDRMGN+MDSSRG LSGT+DRFK  FETKSSRRM TLVASFV LFL++YY
Sbjct: 61  NEEVETHNRMLDRMGNDMDSSRGILSGTMDRFKTVFETKSSRRMLTLVASFVALFLVVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|702263921|ref|XP_010038985.1| (PREDICTED: bet1-like SNARE 1-1 [Eucalyptus grandis])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-48
Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRD RG+R + FDGIEEGGIRASSSYSSHEIDEH+N+ A+DGLQDRVNLLKRLSGDI
Sbjct: 1   MNTRRDVRGNRAALFDGIEEGGIRASSSYSSHEIDEHENERAMDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEV+ HNRMLD MGNEMD+SRG LSGT+DRFK  FETKSSRRMF+LVASFVV+FL++YY
Sbjct: 61  NEEVETHNRMLDGMGNEMDASRGVLSGTMDRFKMVFETKSSRRMFSLVASFVVIFLVVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R438_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108900 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.300e-59
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI
Sbjct: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY
Sbjct: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3K4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120810 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.800e-55
Identity = 112/123 (91.06%), Postives = 119/123 (96.75%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+YRGSR +AFDGIEEGGIRAS SYSSHEIDEHDND ALDGLQDRVNLLKRLSGD+
Sbjct: 1   MNPRREYRGSRVNAFDGIEEGGIRASPSYSSHEIDEHDNDRALDGLQDRVNLLKRLSGDV 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEVDAHNRMLDRMGNEMD+SRGFLSGT+DRFKQAFETKSSRRM TLVASFVVLFLI+YY
Sbjct: 61  HEEVDAHNRMLDRMGNEMDASRGFLSGTMDRFKQAFETKSSRRMLTLVASFVVLFLIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: D7U2W9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02990 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.200e-49
Identity = 102/123 (82.93%), Postives = 116/123 (94.31%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRDYRG+R + FDGIEEGGIRASSSYSSHEIDEHDN+ A+DGLQDRVNLLKRL+GDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEV++HNRMLDR+GN+MD+SRG LSGT+DRFK  FET+SSRRMFTLVASFVV+FLIIYY
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRRMFTLVASFVVIFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: A0A059D2I5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01517 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 8.100e-49
Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRD RG+R + FDGIEEGGIRASSSYSSHEIDEH+N+ A+DGLQDRVNLLKRLSGDI
Sbjct: 1   MNTRRDVRGNRAALFDGIEEGGIRASSSYSSHEIDEHENERAMDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEV+ HNRMLD MGNEMD+SRG LSGT+DRFK  FETKSSRRMF+LVASFVV+FL++YY
Sbjct: 61  NEEVETHNRMLDGMGNEMDASRGVLSGTMDRFKMVFETKSSRRMFSLVASFVVIFLVVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: V4U4K5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022892mg PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.100e-48
Identity = 102/123 (82.93%), Postives = 113/123 (91.87%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRDYR S+ + FDGIEEGGIRASSSYS HEIDEHDN+ AL+GLQDRVNLLKRLSGDI
Sbjct: 1   MNSRRDYRNSKVALFDGIEEGGIRASSSYS-HEIDEHDNERALEGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVD HNRML+RMGN+MD+SRG LSGT+D+FK  FETKSSRRMFTLVASFVV+FLI+YY
Sbjct: 61  NEEVDTHNRMLERMGNDMDASRGVLSGTMDKFKMVFETKSSRRMFTLVASFVVIFLIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122
[Close]
BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
Match: BET11_ARATH (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 8.800e-49
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+ RG R+S FDGIEEGGIRA+SSYS HEI+EH+N+ AL+GLQDRV LLKRLSGDI
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYS-HEINEHENERALEGLQDRVILLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVD HNRMLDRMGN+MDSSRGFLSGT+DRFK  FETKSSRRM TLVASFV LFL+IYY
Sbjct: 61  NEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122
[Close]
BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
Match: BET12_ARATH (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4)

HSP 1 Score: 141.7 bits (356), Expect = 5.200e-33
Identity = 77/126 (61.11%), Postives = 100/126 (79.37%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAF---DGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLS 60
           MN RR+ R SRTS F   DG+EEG +RASSSY+    DE DND AL+ LQDRV+ LKR++
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVT 60

Query: 61  GDINEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLI 120
           GDI+EEV+ HNR+LD++GN+MDS+RG +SGT++RFK  FE KS+R+   L+A FV+LFLI
Sbjct: 61  GDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLI 120

Query: 121 IYYLTR 124
           +YYL R
Sbjct: 121 MYYLIR 123
[Close]
BLAST of Spo02410.1 vs. TAIR (Arabidopsis)
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A)

HSP 1 Score: 194.1 bits (492), Expect = 5.000e-50
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+ RG R+S FDGIEEGGIRA+SSYS HEI+EH+N+ AL+GLQDRV LLKRLSGDI
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYS-HEINEHENERALEGLQDRVILLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVD HNRMLDRMGN+MDSSRGFLSGT+DRFK  FETKSSRRM TLVASFV LFL+IYY
Sbjct: 61  NEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122
[Close]
BLAST of Spo02410.1 vs. TAIR (Arabidopsis)
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein)

HSP 1 Score: 141.7 bits (356), Expect = 2.900e-34
Identity = 77/126 (61.11%), Postives = 100/126 (79.37%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAF---DGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLS 60
           MN RR+ R SRTS F   DG+EEG +RASSSY+    DE DND AL+ LQDRV+ LKR++
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVT 60

Query: 61  GDINEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLI 120
           GDI+EEV+ HNR+LD++GN+MDS+RG +SGT++RFK  FE KS+R+   L+A FV+LFLI
Sbjct: 61  GDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLI 120

Query: 121 IYYLTR 124
           +YYL R
Sbjct: 121 MYYLIR 123
The following BLAST results are available for this feature:
BLAST of Spo02410.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902202425|gb|KNA14273.1|1.9e-59100.hypothetical protein SOVF_1089... [more]
gi|731336362|ref|XP_010679212.1|1.4e-5491.0PREDICTED: bet1-like SNARE 1-1... [more]
gi|225437830|ref|XP_002262985.1|1.8e-4982.9PREDICTED: bet1-like SNARE 1-1... [more]
gi|729291342|ref|XP_010551548.1|6.8e-4983.7PREDICTED: bet1-like SNARE 1-1... [more]
gi|702263921|ref|XP_010038985.1|1.2e-4882.1PREDICTED: bet1-like SNARE 1-1... [more]
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BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R438_SPIOL1.3e-59100.Uncharacterized protein OS=Spi... [more]
A0A0J8F3K4_BETVU9.8e-5591.0Uncharacterized protein OS=Bet... [more]
D7U2W9_VITVI1.2e-4982.9Putative uncharacterized prote... [more]
A0A059D2I5_EUCGR8.1e-4982.1Uncharacterized protein OS=Euc... [more]
V4U4K5_9ROSI3.1e-4882.9Uncharacterized protein OS=Cit... [more]
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BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
BET11_ARATH8.8e-4982.9Bet1-like SNARE 1-1 OS=Arabido... [more]
BET12_ARATH5.2e-3361.1Bet1-like SNARE 1-2 OS=Arabido... [more]
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BLAST of Spo02410.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G58170.15.0e-5082.9BET1P/SFT1P-like protein 14A[more]
AT4G14455.12.9e-3461.1Target SNARE coiled-coil domai... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 28..95
score: 1.
IPR000727Target SNARE coiled-coil homology domainPROFILEPS50192T_SNAREcoord: 33..95
score: 12
NoneNo IPR availableGENE3D1.20.5.110coord: 30..94
score: 1.1
NoneNo IPR availablePANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 1..123
score: 1.0
NoneNo IPR availablePANTHERPTHR12791:SF34SUBFAMILY NOT NAMEDcoord: 1..123
score: 1.0
NoneNo IPR availableunknownSSF58038SNARE fusion complexcoord: 29..93
score: 2.22

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010050 vegetative phase change
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0006346 methylation-dependent chromatin silencing
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0010073 meristem maintenance
biological_process GO:0010014 meristem initiation
biological_process GO:0048439 flower morphogenesis
biological_process GO:0006260 DNA replication
biological_process GO:0006281 DNA repair
biological_process GO:0061025 membrane fusion
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0046686 response to cadmium ion
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
biological_process GO:0006833 water transport
biological_process GO:0019932 second-messenger-mediated signaling
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0019307 mannose biosynthetic process
biological_process GO:0019853 L-ascorbic acid biosynthetic process
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0009298 GDP-mannose biosynthetic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0007267 cell-cell signaling
biological_process GO:0006306 DNA methylation
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009987 cellular process
biological_process GO:0016043 cellular component organization
biological_process GO:0008152 metabolic process
biological_process GO:0006721 terpenoid metabolic process
biological_process GO:0072593 reactive oxygen species metabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0046520 sphingoid biosynthetic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0015031 protein transport
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0044434 chloroplast part
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0005768 endosome
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0055029 nuclear DNA-directed RNA polymerase complex
cellular_component GO:0005773 vacuole
cellular_component GO:0032580 Golgi cisterna membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005719 nuclear euchromatin
cellular_component GO:0035101 FACT complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0031461 cullin-RING ubiquitin ligase complex
cellular_component GO:0005730 nucleolus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0004615 phosphomannomutase activity
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo266400.83Barchart | Table
Spo020130.77Barchart | Table
Spo085110.77Barchart | Table
Spo208520.76Barchart | Table
Spo101640.76Barchart | Table
Spo007830.76Barchart | Table
Spo167690.75Barchart | Table
Spo250130.75Barchart | Table
Spo015900.75Barchart | Table
Spo111900.74Barchart | Table
Spo135140.74Barchart | Table
Spo208260.73Barchart | Table
Spo226590.73Barchart | Table
Spo239300.73Barchart | Table
Spo176770.73Barchart | Table
Spo074410.73Barchart | Table
Spo141720.73Barchart | Table
Spo039500.73Barchart | Table
Spo105510.73Barchart | Table
Spo088840.73Barchart | Table
Spo089820.72Barchart | Table
Spo126590.72Barchart | Table
Spo166890.72Barchart | Table
Spo074150.72Barchart | Table
Spo003890.72Barchart | Table
Spo105500.71Barchart | Table
Spo165290.71Barchart | Table
Spo001690.71Barchart | Table
Spo063580.71Barchart | Table
Spo242320.71Barchart | Table
Spo127490.71Barchart | Table
Spo186940.71Barchart | Table
Spo221460.71Barchart | Table
Spo037300.70Barchart | Table
Spo005360.70Barchart | Table
Spo038650.70Barchart | Table
Spo095590.70Barchart | Table
Spo113550.70Barchart | Table
Spo150120.70Barchart | Table
Spo155290.70Barchart | Table
Spo168810.70Barchart | Table
Spo206930.70Barchart | Table
Spo216280.70Barchart | Table
Spo229700.70Barchart | Table
Spo246540.70Barchart | Table
Spo255680.70Barchart | Table
Spo021150.69Barchart | Table
Spo003970.69Barchart | Table
Spo228590.69Barchart | Table
Spo180160.69Barchart | Table
Spo011460.69Barchart | Table
Spo125090.69Barchart | Table
Spo218280.69Barchart | Table
Spo218310.69Barchart | Table
Spo112870.69Barchart | Table
Spo109600.69Barchart | Table
Spo135350.69Barchart | Table
Spo098420.69Barchart | Table
Spo103990.69Barchart | Table
Spo017310.68Barchart | Table
Spo114820.68Barchart | Table
Spo192870.68Barchart | Table
Spo193470.68Barchart | Table
Spo115540.68Barchart | Table
Spo195540.68Barchart | Table
Spo010430.68Barchart | Table
Spo211490.68Barchart | Table
Spo224580.68Barchart | Table
Spo076940.68Barchart | Table
Spo231150.68Barchart | Table
Spo052710.68Barchart | Table
Spo140840.68Barchart | Table
Spo093500.68Barchart | Table
Spo109400.68Barchart | Table
Spo110210.68Barchart | Table
Spo050860.68Barchart | Table
Spo158740.68Barchart | Table
Spo030020.68Barchart | Table
Spo167960.68Barchart | Table
Spo168960.68Barchart | Table
Spo087260.68Barchart | Table
Spo126600.67Barchart | Table
Spo038950.67Barchart | Table
Spo037350.67Barchart | Table
Spo051920.67Barchart | Table
Spo266900.67Barchart | Table
Spo091110.67Barchart | Table
Spo065690.67Barchart | Table
Spo167590.67Barchart | Table
Spo070790.67Barchart | Table
Spo145890.67Barchart | Table
Spo107060.67Barchart | Table
Spo028480.67Barchart | Table
Spo201970.67Barchart | Table
Spo171230.67Barchart | Table
Spo219670.67Barchart | Table
Spo059480.67Barchart | Table
Spo010480.67Barchart | Table
Spo086030.67Barchart | Table
Spo062910.67Barchart | Table
Spo215990.67Barchart | Table
Spo070150.67Barchart | Table
Spo228510.67Barchart | Table
Spo119930.67Barchart | Table
Spo177840.67Barchart | Table
Spo171540.67Barchart | Table
Spo259450.67Barchart | Table
Spo234340.67Barchart | Table
Spo031520.67Barchart | Table
Spo083270.66Barchart | Table
Spo057250.66Barchart | Table
Spo086130.66Barchart | Table
Spo056700.66Barchart | Table
Spo253020.66Barchart | Table
Spo100830.66Barchart | Table
Spo053410.66Barchart | Table
Spo105950.66Barchart | Table
Spo106180.66Barchart | Table
Spo255060.66Barchart | Table
Spo116800.66Barchart | Table
Spo123970.66Barchart | Table
Spo126570.66Barchart | Table
Spo126580.66Barchart | Table
Spo042790.66Barchart | Table
Spo135340.66Barchart | Table
Spo139760.66Barchart | Table
Spo036480.66Barchart | Table
Spo149800.66Barchart | Table
Spo150030.66Barchart | Table
Spo273650.66Barchart | Table
Spo154200.66Barchart | Table
Spo257320.66Barchart | Table
Spo259360.66Barchart | Table
Spo170240.66Barchart | Table
Spo189610.66Barchart | Table
Spo194910.66Barchart | Table
Spo206090.66Barchart | Table
Spo015520.66Barchart | Table
Spo263930.66Barchart | Table
Spo220470.66Barchart | Table
Spo015070.66Barchart | Table
Spo227800.66Barchart | Table
Spo231560.66Barchart | Table
Spo239080.66Barchart | Table
Spo249820.66Barchart | Table
Spo069620.66Barchart | Table
Spo072910.66Barchart | Table
Spo060220.66Barchart | Table
Spo202890.65Barchart | Table
Spo083550.65Barchart | Table
Spo005790.65Barchart | Table
Spo184530.65Barchart | Table
Spo023470.65Barchart | Table
Spo124230.65Barchart | Table
Spo158050.65Barchart | Table
Spo144680.65Barchart | Table
Spo235800.65Barchart | Table
Spo238870.65Barchart | Table
Spo054670.65Barchart | Table
Spo220520.65Barchart | Table
Spo206960.65Barchart | Table