Spo02482 (gene)

Overview
NameSpo02482
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBnaA02g37040D protein
Locationchr3 : 5257416 .. 5260483 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAATAATGAAATAAAAATAAAAATAATACAAAAAGATAAAAAGGAAAGCACAGATAAGATTATTCTTTCTGAATTGTGATCAAACCAATTATTGTTCCAATTCACAATCTAACATCTCAGGAAAAAAAAAAAAAGAGAAACTGAAGAAAGCTTAGCAATGAAGAGAATTCCTCGAATCAAATTTCCTGATAGACACCCTAAACCCTCAACTTCAACTTCTGGTATACTTTCCTTTCTTGTTTTCTCCATTTTTCCCCTGTTTTTTTTACTCTGAATTTTCCTCATTTCATTGAGTTAAAGACTGAATCTTTTTATTGTTTGAATTGGTTTTTCTGGGTTTTCAATTTCTGGGTGTGTTTTGTTGTTCTTAACTGCATATAATTTATAATAACTAGGAATTGAAAAAGAATACACCATAGCTTTTATTTACAAGTAATAATCTAGCTATAAAACCACCATCTTTTTGTGTAGTGAGAAAAGCAAGAGCAGTGATATAGACAAGATTTGATCTGAATTACTGTTACCACCTCCAAAGGGACAAGATTTTACTTGTTCTTAAGTGTAGTTGTTTTGGGTGGTGGCTTGAAAATTCTTCATTTTACTTTGGTGAACTTTTTTTTTTTTTTTTTGAGAGGGTACTTTGGTGAACTTCATATGACCATAATTGGTCAATTTGGGATTGCTTTTTTTGCCTCTTGCCTCAGTCACAAATCAGAAATGGTATAATAAGGTTGTGTACATCTGGACCTTCCGAGAGGATTGACTTCAATAGTTCAATGAGATTCATATTGGTTTATAATTGTTGTTTATCTAGGTAATTCGTATCACTTTGTAAGGAATTGTAAGTGGATTATAATTGTTTTTAGTATAATTAAAATGAACTATTGATCAGTAGAAAATATATGCTGGTGTTGGGAAGAAGATAGACTCTTGGTTGGTTTAGAATTTTGCTCCATTACAGTATATACATGTGTGAATTTTTATGTATTCATGCCGGATTTAGTTGGGACATCAAAGTACAACTAGTTCCTGACCATGATGTTCGGAAGTGCAGTGAAGTCTAACAGAATCTATGAGACGGATAGATCAAGGGCTTGTTTGGTTGACATGGGAATTTAATTTCCATTGGAAGTGATAATCCAAGGGAAACTACTTCCCTTTTCCTTAAATAGTTTGGTTGACAACATGGGAATTAGAAATTCCCATGAATTTTGATTGACCAAGGGGGCTAGATAATTTACTTCCCATGTTTTGTAGGAATTCCAACTTCCCCTGAATTCCAACTTCTTCCATTTTCACATTTTCATGTCAACCAAACAACTAATCAATCTATAAATTCCCATAAACTTCCACTTCCACCATTTTTAAATGTCTAACCAAACAACCCCCGAATGTTAAGAACATATCCTTGAAGTTCGCTTGTCGCCTTGTATATTAACCTTGAAGTTATGTCATCATCTGGTGATGGATTACACATTGTGTACATGATAGTCTTATAGTTATAAGATAAGTAAGAAAGGATTTCGAGTCATATGATTTTGTAAGGAATAATGTCCAAACATACTTTCAAATATGTGCGTATGGTGTGAGGAGTTTCTTCGTCTTAACTGCTACAATATGTGATAAGAAGAATGCCTTGTGTAATCATACAACTACAGGAATATATGTTTGCATGTCTAGTTTCTCGGTGTTCTAGTAATGCATTCCCTGTCTCAAGATAGAAAATCTCTGTTGTAGTATAGATGTTCTGTAAAGTTAAAGAAATTTCCAGAACATATTACATGCATTGTTCTATCACATATAGTAGTATTGAGAATGTCTGTTGTAGTATTGACCGTGCACCCTCTCACATTTTTTCTTTACAAGTGAGGGAAATGTAATAGGGCCCACCAATGGGCGTATAAATACCCCAATAATTTTCAGAATATATCAGCACCAATCTTATTTTCAGAATATATCAGCACCAATCTTATATTACTTGCTTTGCTGCATAGGTAATGAGTCCGCAAAGCCGTCATCGGGAAATGGAAGCACTAGTAAGCTTACAACATCGAAGTCTGACGTTCCTGCACCACCCGGTTCCTTAGGCGTAGGTGGTAAAGCTTCACTTCAGCCTAAACGCTCACCAGTCTCAAAGGAGGAGATGGAAGCTATCTTGGTAAAATTGACTTTTTCCTAACACAATTCCGAAAATGACACAGAAGAAACTAGTGATTTAAACTTTTTCCTTTGTGTAACTTGCAGTTGGGTGGCTGCGTTTAGGTCCATTTCGGAAAGTTATCAAAATGAAGGTGCTGCTTTTGAAACCTTATGTTCCTTATTTCCTTCCTTCCAGTGCTACTGCGGCCATGAGCCAAAGAAGACTGTGCTCCTAGCCACACTTGGAGTTTGCAAATTCAGATGTTTTCGCAACTATCTGATGTACTGAACTATATATAATTACTGTCAATATCATAAACTTTACCTTCTGAATGTATCAAAGTGGTGTTTTCGTTACAGCAGATCTAGTTAAATAATGGAGAAACGTAGACATATCTGATCTAATCTGAAACGACCAGGTTTACTATTTGACCTAAATGGAGTCAAAATAGTGCAGAGTTAGAACTTAGAACCGCATTATACTCCAACCCTCTAGGCATTACAACCAATATTGCCATGAATCCGAAATGTTATATGATTAAAATCGGTTTGTTTTTGGAAAAAGACTAGAATATGATCTAAATCAAATTTTACCAGGAAAAAGAAGATTAAAATTGATATGTTATTGGCAATTGACTCGAATATGATCTAACCCAAATTTTACCAGGAAAAGAATGACTAAAATTGATATGTTATTGGCAATACACTAGAAAATTATCTAATCCAAATTTTACCAGGAAATGGAACAAATGTGCAATTTGCAACCTCTTATTACATCTACAAGTACCAATGCCCGTGTAGTTCAAGCACCACAGTTACAGAGTGTTACAGAAAGGAAAAAATCGCGAGAAAAATAGAAAGACAGGCAGAAAAATCAGAATAGGAAGTGCATATAATAACATAATGCTGATTACTGACAAATGATAC

mRNA sequence

GGGAATAATGAAATAAAAATAAAAATAATACAAAAAGATAAAAAGGAAAGCACAGATAAGATTATTCTTTCTGAATTGTGATCAAACCAATTATTGTTCCAATTCACAATCTAACATCTCAGGAAAAAAAAAAAAAGAGAAACTGAAGAAAGCTTAGCAATGAAGAGAATTCCTCGAATCAAATTTCCTGATAGACACCCTAAACCCTCAACTTCAACTTCTGGTAATGAGTCCGCAAAGCCGTCATCGGGAAATGGAAGCACTAGTAAGCTTACAACATCGAAGTCTGACGTTCCTGCACCACCCGGTTCCTTAGGCGTAGGTGGTAAAGCTTCACTTCAGCCTAAACGCTCACCAGTCTCAAAGGAGGAGATGGAAGCTATCTTGTTGGGTGGCTGCGTTTAGGTCCATTTCGGAAAGTTATCAAAATGAAGGTGCTGCTTTTGAAACCTTATGTTCCTTATTTCCTTCCTTCCAGTGCTACTGCGGCCATGAGCCAAAGAAGACTGTGCTCCTAGCCACACTTGGAGTTTGCAAATTCAGATGTTTTCGCAACTATCTGATGTACTGAACTATATATAATTACTGTCAATATCATAAACTTTACCTTCTGAATGTATCAAAGTGGTGTTTTCGTTACAGCAGATCTAGTTAAATAATGGAGAAACGTAGACATATCTGATCTAATCTGAAACGACCAGGTTTACTATTTGACCTAAATGGAGTCAAAATAGTGCAGAGTTAGAACTTAGAACCGCATTATACTCCAACCCTCTAGGCATTACAACCAATATTGCCATGAATCCGAAATGTTATATGATTAAAATCGGTTTGTTTTTGGAAAAAGACTAGAATATGATCTAAATCAAATTTTACCAGGAAAAAGAAGATTAAAATTGATATGTTATTGGCAATTGACTCGAATATGATCTAACCCAAATTTTACCAGGAAAAGAATGACTAAAATTGATATGTTATTGGCAATACACTAGAAAATTATCTAATCCAAATTTTACCAGGAAATGGAACAAATGTGCAATTTGCAACCTCTTATTACATCTACAAGTACCAATGCCCGTGTAGTTCAAGCACCACAGTTACAGAGTGTTACAGAAAGGAAAAAATCGCGAGAAAAATAGAAAGACAGGCAGAAAAATCAGAATAGGAAGTGCATATAATAACATAATGCTGATTACTGACAAATGATAC

Coding sequence (CDS)

ATGAAGAGAATTCCTCGAATCAAATTTCCTGATAGACACCCTAAACCCTCAACTTCAACTTCTGGTAATGAGTCCGCAAAGCCGTCATCGGGAAATGGAAGCACTAGTAAGCTTACAACATCGAAGTCTGACGTTCCTGCACCACCCGGTTCCTTAGGCGTAGGTGGTAAAGCTTCACTTCAGCCTAAACGCTCACCAGTCTCAAAGGAGGAGATGGAAGCTATCTTGTTGGGTGGCTGCGTTTAG

Protein sequence

MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASLQPKRSPVSKEEMEAILLGGCV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02482.1Spo02482.1mRNA


Homology
[Close]
BLAST of Spo02482.1 vs. NCBI nr
Match: gi|902179416|gb|KNA09360.1| (hypothetical protein SOVF_154390 [Spinacia oleracea])

HSP 1 Score: 156.4 bits (394), Expect = 2.200e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASL 60
          MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASL
Sbjct: 1  MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASL 60

Query: 61 QPKRSPVSKEEMEAILLGGCV 82
          QPKRSPVSKEEMEAILLGGCV
Sbjct: 61 QPKRSPVSKEEMEAILLGGCV 81
[Close]
BLAST of Spo02482.1 vs. NCBI nr
Match: gi|731321665|ref|XP_010671476.1| (PREDICTED: uncharacterized protein LOC104888264 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 127.9 bits (320), Expect = 8.200e-27
Identity = 70/83 (84.34%), Postives = 76/83 (91.57%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNES-AKPSSGNGSTSKL-TTSKSDVPAPPGSLGVGGKA 60
          MKRIPRIKFP+RHPK STSTSGNES  KPS+GN +T K+ TTSKSDVPAPP SLGVGGKA
Sbjct: 1  MKRIPRIKFPERHPKSSTSTSGNESRTKPSTGNTNTRKVSTTSKSDVPAPPSSLGVGGKA 60

Query: 61 SLQPKRSPVSKEEMEAILLGGCV 82
          SLQPKR+PV+KEEMEAILLGGCV
Sbjct: 61 SLQPKRAPVTKEEMEAILLGGCV 83
[Close]
BLAST of Spo02482.1 vs. NCBI nr
Match: gi|702289403|ref|XP_010047001.1| (PREDICTED: uncharacterized protein LOC104435975 [Eucalyptus grandis])

HSP 1 Score: 96.3 bits (238), Expect = 2.600e-17
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNES-AKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKAS 60
          MKRIPRIKFP RHPK S S S +++ A PS+ N   +K++ S+SDVPAPP ++ VGG+AS
Sbjct: 1  MKRIPRIKFPQRHPKSSASGSASQTQAAPSTEN--VAKISASRSDVPAPPSNMAVGGQAS 60

Query: 61 LQPKRSPVSKEEMEAILLGGCV 82
          LQPKR+PVS +E+EAILLGGC+
Sbjct: 61 LQPKRTPVSDKEIEAILLGGCL 80
[Close]
BLAST of Spo02482.1 vs. NCBI nr
Match: gi|590673861|ref|XP_007039006.1| (Uncharacterized protein TCM_015378 [Theobroma cacao])

HSP 1 Score: 91.7 bits (226), Expect = 6.500e-16
Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNES-AKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKAS 60
          +KRIPRIKFP RHPK S S   +E+ A+P  GN   S +T S+SDVPAPP +  VGGKAS
Sbjct: 7  LKRIPRIKFPQRHPKSSASGCVSETQARPKYGNIIDSFITRSRSDVPAPPINTAVGGKAS 66

Query: 61 LQPKRSPVSKEEMEAILLGGC 81
          L PKR+PVS+ E+EAILLGGC
Sbjct: 67 LLPKRTPVSEREIEAILLGGC 87
[Close]
BLAST of Spo02482.1 vs. NCBI nr
Match: gi|743770720|ref|XP_010915651.1| (PREDICTED: uncharacterized protein LOC105040694 isoform X2 [Elaeis guineensis])

HSP 1 Score: 88.2 bits (217), Expect = 7.200e-15
Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASL 60
          MKRIPRIKFP RHPKP  + S  +S  PSSG     +    KSDVPAPP +  +GGKASL
Sbjct: 7  MKRIPRIKFPQRHPKPQGAASQPQSP-PSSGEVPNYRF---KSDVPAPPSNTAIGGKASL 66

Query: 61 QPKRSPVSKEEMEAILLGGC 81
           PKR+PVS++E+EAILLGGC
Sbjct: 67 LPKRTPVSEKEIEAILLGGC 82
[Close]
BLAST of Spo02482.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQ12_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154390 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.500e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASL 60
          MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASL
Sbjct: 1  MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASL 60

Query: 61 QPKRSPVSKEEMEAILLGGCV 82
          QPKRSPVSKEEMEAILLGGCV
Sbjct: 61 QPKRSPVSKEEMEAILLGGCV 81
[Close]
BLAST of Spo02482.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CR46_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g052150 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.700e-27
Identity = 70/83 (84.34%), Postives = 76/83 (91.57%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNES-AKPSSGNGSTSKL-TTSKSDVPAPPGSLGVGGKA 60
          MKRIPRIKFP+RHPK STSTSGNES  KPS+GN +T K+ TTSKSDVPAPP SLGVGGKA
Sbjct: 1  MKRIPRIKFPERHPKSSTSTSGNESRTKPSTGNTNTRKVSTTSKSDVPAPPSSLGVGGKA 60

Query: 61 SLQPKRSPVSKEEMEAILLGGCV 82
          SLQPKR+PV+KEEMEAILLGGCV
Sbjct: 61 SLQPKRAPVTKEEMEAILLGGCV 83
[Close]
BLAST of Spo02482.1 vs. UniProtKB/TrEMBL
Match: A0A061G2R7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015378 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.500e-16
Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNES-AKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKAS 60
          +KRIPRIKFP RHPK S S   +E+ A+P  GN   S +T S+SDVPAPP +  VGGKAS
Sbjct: 7  LKRIPRIKFPQRHPKSSASGCVSETQARPKYGNIIDSFITRSRSDVPAPPINTAVGGKAS 66

Query: 61 LQPKRSPVSKEEMEAILLGGC 81
          L PKR+PVS+ E+EAILLGGC
Sbjct: 67 LLPKRTPVSEREIEAILLGGC 87
[Close]
BLAST of Spo02482.1 vs. UniProtKB/TrEMBL
Match: A0A0D2MWS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G111400 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 9.500e-14
Identity = 48/83 (57.83%), Postives = 55/83 (66.27%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSK---SDVPAPPGSLGVGGK 60
          +KRIPRIKFP RHPKPS S S +E+       G            SDVPAPP +  VGGK
Sbjct: 7  LKRIPRIKFPQRHPKPSPSGSISETQATRKDGGVIGNFIARSRLSSDVPAPPSNTAVGGK 66

Query: 61 ASLQPKRSPVSKEEMEAILLGGC 81
          ASL PKR+PVS+ E+EAILLGGC
Sbjct: 67 ASLLPKRTPVSEREIEAILLGGC 89
[Close]
BLAST of Spo02482.1 vs. UniProtKB/TrEMBL
Match: M4EKS7_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.200e-13
Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGS-TSKLTTSKSDVPAPPGSLGVGGKAS 60
          MKRIPRIKFP RH  PS+S++ +    P+SG+ S  +K  T+ SDVPA P +  VGGKAS
Sbjct: 1  MKRIPRIKFPQRH-SPSSSSAISSGPGPTSGSVSGGNKNITASSDVPAAPKNTAVGGKAS 60

Query: 61 LQPKRSPVSKEEMEAILLGGCV 82
          LQPKR+PVS +E+E+I+LGGC+
Sbjct: 61 LQPKRTPVSDKEIESIMLGGCI 81
[Close]
BLAST of Spo02482.1 vs. TAIR (Arabidopsis)
Match: AT5G24165.1 (unknown protein)

HSP 1 Score: 75.5 bits (184), Expect = 1.700e-14
Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASL 60
          M+RIPRIKFP RH     S S      P S +G   K  T+ SDVPA P +   GGKASL
Sbjct: 1  MRRIPRIKFPQRH-----SISSGSGPAPGSVSG-VKKNVTASSDVPAAPKNTADGGKASL 60

Query: 61 QPKRSPVSKEEMEAILLGGCV 82
          QPKR+PVS +E+E+I+LGGC+
Sbjct: 61 QPKRTPVSDKEIESIMLGGCI 75
[Close]
BLAST of Spo02482.1 vs. TAIR (Arabidopsis)
Match: AT4G23885.1 (unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.100e-10
Identity = 39/81 (48.15%), Postives = 48/81 (59.26%), Query Frame = 1 

		  

Query: 1  MKRIPRIKFPDRHPKPSTSTSGNESAKPSSGNGSTSKLTTSKSDVPAPPGSLGVGGKASL 60
          +KRIPRIKFP RH  PS S   ++ A  +     ++     K+           GGKAS 
Sbjct: 7  LKRIPRIKFPQRHINPSASEGKSQVANEADTLFFSNLNNIQKT----------TGGKASS 66

Query: 61 QPKRSPVSKEEMEAILLGGCV 82
          QPKR+PVS EEMEAILLGGC+
Sbjct: 67 QPKRTPVSNEEMEAILLGGCI 77
The following BLAST results are available for this feature:
BLAST of Spo02482.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902179416|gb|KNA09360.1|2.2e-35100.hypothetical protein SOVF_1543... [more]
gi|731321665|ref|XP_010671476.1|8.2e-2784.3PREDICTED: uncharacterized pro... [more]
gi|702289403|ref|XP_010047001.1|2.6e-1763.4PREDICTED: uncharacterized pro... [more]
gi|590673861|ref|XP_007039006.1|6.5e-1664.2Uncharacterized protein TCM_01... [more]
gi|743770720|ref|XP_010915651.1|7.2e-1562.5PREDICTED: uncharacterized pro... [more]
back to top
BLAST of Spo02482.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QQ12_SPIOL1.5e-35100.Uncharacterized protein OS=Spi... [more]
A0A0J8CR46_BETVU5.7e-2784.3Uncharacterized protein OS=Bet... [more]
A0A061G2R7_THECC4.5e-1664.2Uncharacterized protein OS=The... [more]
A0A0D2MWS0_GOSRA9.5e-1457.8Uncharacterized protein OS=Gos... [more]
M4EKS7_BRARP1.2e-1358.5Uncharacterized protein OS=Bra... [more]
back to top
BLAST of Spo02482.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo02482.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G24165.11.7e-1454.3unknown protein[more]
AT4G23885.11.1e-1048.1unknown protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35751FAMILY NOT NAMEDcoord: 1..81
score: 6.0
NoneNo IPR availablePANTHERPTHR35751:SF1SUBFAMILY NOT NAMEDcoord: 1..81
score: 6.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0007033 vacuole organization
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007030 Golgi organization
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0009409 response to cold
biological_process GO:0046838 phosphorylated carbohydrate dephosphorylation
biological_process GO:0042732 D-xylose metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0007623 circadian rhythm
biological_process GO:0009909 regulation of flower development
biological_process GO:0006096 glycolytic process
biological_process GO:0002213 defense response to insect
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0005983 starch catabolic process
biological_process GO:0050832 defense response to fungus
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0048046 apoplast
cellular_component GO:0000785 chromatin
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009507 chloroplast
molecular_function GO:0004034 aldose 1-epimerase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0050308 sugar-phosphatase activity
molecular_function GO:2001070 starch binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0004672 protein kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo108610.82Barchart | Table
Spo173380.79Barchart | Table
Spo197880.78Barchart | Table
Spo198740.77Barchart | Table
Spo025130.77Barchart | Table
Spo264270.76Barchart | Table
Spo101710.75Barchart | Table
Spo115200.75Barchart | Table
Spo134910.73Barchart | Table
Spo103160.73Barchart | Table
Spo260130.73Barchart | Table
Spo247900.73Barchart | Table
Spo273740.73Barchart | Table
Spo206860.73Barchart | Table
Spo036540.73Barchart | Table
Spo187460.73Barchart | Table
Spo103600.73Barchart | Table
Spo001140.73Barchart | Table
Spo128940.73Barchart | Table
Spo260450.73Barchart | Table
Spo025800.72Barchart | Table
Spo232860.72Barchart | Table
Spo107520.72Barchart | Table
Spo001240.72Barchart | Table
Spo197510.72Barchart | Table
Spo251290.72Barchart | Table
Spo046630.72Barchart | Table
Spo140320.72Barchart | Table
Spo002830.72Barchart | Table
Spo018070.72Barchart | Table
Spo223640.72Barchart | Table
Spo132020.72Barchart | Table
Spo222560.72Barchart | Table
Spo200710.72Barchart | Table
Spo093170.71Barchart | Table
Spo105850.71Barchart | Table
Spo174970.71Barchart | Table
Spo016160.71Barchart | Table
Spo067920.71Barchart | Table
Spo046980.71Barchart | Table
Spo163390.71Barchart | Table
Spo097520.71Barchart | Table
Spo231720.71Barchart | Table
Spo102390.71Barchart | Table
Spo134820.70Barchart | Table
Spo012350.70Barchart | Table
Spo022520.70Barchart | Table
Spo056400.70Barchart | Table
Spo066790.70Barchart | Table
Spo068590.70Barchart | Table
Spo106530.70Barchart | Table
Spo115090.70Barchart | Table
Spo120250.70Barchart | Table
Spo141300.70Barchart | Table
Spo166520.70Barchart | Table
Spo177550.70Barchart | Table
Spo245160.70Barchart | Table
Spo248570.70Barchart | Table
Spo273520.70Barchart | Table
Spo076230.69Barchart | Table
Spo082540.69Barchart | Table
Spo119510.69Barchart | Table
Spo099180.69Barchart | Table
Spo010690.69Barchart | Table
Spo261680.69Barchart | Table
Spo003620.69Barchart | Table
Spo218020.69Barchart | Table
Spo226660.69Barchart | Table
Spo177880.69Barchart | Table
Spo173540.69Barchart | Table
Spo061410.68Barchart | Table
Spo208900.68Barchart | Table
Spo137600.68Barchart | Table
Spo060040.68Barchart | Table
Spo094990.68Barchart | Table
Spo101920.68Barchart | Table
Spo236680.68Barchart | Table
Spo150840.68Barchart | Table
Spo121070.68Barchart | Table
Spo047630.68Barchart | Table
Spo235880.68Barchart | Table
Spo172500.68Barchart | Table
Spo045460.68Barchart | Table
Spo128490.68Barchart | Table
Spo021750.68Barchart | Table
Spo271220.68Barchart | Table
Spo257870.68Barchart | Table
Spo022720.68Barchart | Table
Spo188340.68Barchart | Table
Spo108950.68Barchart | Table
Spo213510.68Barchart | Table
Spo192460.68Barchart | Table
Spo039030.68Barchart | Table
Spo232480.67Barchart | Table
Spo068290.67Barchart | Table
Spo067840.67Barchart | Table
Spo063440.67Barchart | Table
Spo135160.67Barchart | Table
Spo268340.67Barchart | Table
Spo141680.67Barchart | Table
Spo152750.67Barchart | Table
Spo157100.67Barchart | Table
Spo161900.67Barchart | Table
Spo270810.67Barchart | Table
Spo173710.67Barchart | Table
Spo179590.67Barchart | Table
Spo041360.67Barchart | Table
Spo190350.67Barchart | Table
Spo195990.67Barchart | Table
Spo041040.67Barchart | Table
Spo198510.67Barchart | Table
Spo209520.67Barchart | Table
Spo223230.67Barchart | Table
Spo236750.67Barchart | Table
Spo272240.67Barchart | Table
Spo007500.67Barchart | Table
Spo007480.67Barchart | Table
Spo130290.66Barchart | Table
Spo171610.66Barchart | Table
Spo111930.66Barchart | Table
Spo121550.66Barchart | Table
Spo268110.66Barchart | Table
Spo098970.66Barchart | Table
Spo069490.66Barchart | Table
Spo188280.66Barchart | Table
Spo024540.66Barchart | Table
Spo031950.66Barchart | Table
Spo082050.66Barchart | Table
Spo191230.66Barchart | Table
Spo012610.66Barchart | Table
Spo168830.66Barchart | Table
Spo150650.66Barchart | Table
Spo083040.66Barchart | Table
Spo044330.66Barchart | Table
Spo217680.66Barchart | Table
Spo133730.66Barchart | Table
Spo001720.66Barchart | Table
Spo114310.66Barchart | Table
Spo216580.65Barchart | Table
Spo190990.65Barchart | Table
Spo220060.65Barchart | Table
Spo222600.65Barchart | Table
Spo083590.65Barchart | Table
Spo224420.65Barchart | Table
Spo020650.65Barchart | Table
Spo238590.65Barchart | Table
Spo105000.65Barchart | Table
Spo259180.65Barchart | Table
Spo026850.65Barchart | Table
Spo002050.65Barchart | Table
Spo216760.65Barchart | Table