Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGTGGAGGATGATGAACCTCTTGATTTATCGCTTTCGCTTTGGCATGGAAGTTGCATAGGGAAAGAGAAAGTAATCAAGAAAGTGATCAAGAAAGAAGAAGAATATTATGATGGTGATCTATGTCTTTCTCTTTCTCTTTCTCCTTCTCCTTCTCCGTCTTTCTATTATGGAACTACTTCTATAGTTGTCTATGGAAGTACTTCTACTGATTCCGAAGCCGTCCCTTCTTCTCCAAACAATCAATTTCAACCGGAGTGGACATTCACAAAACACTTGTCAAAATCCGACTGTGATAAAGGTCAAGCCCGACTTTTGCTCAACAAGCCATGGGTGAAAAACAACGTAATTGAGAATGAATTACAGAGAGAAGAAGCCATTAAGAACGGTGGTATTTCGATTGATTTCTTTGATTGGGATGAAAAATATCTACTTGGATTGAAATTGAAGAGTTGGGTAACCGGAAGTTATGTACTCACTGAAAATTGGATAGGAGGAGTTTGCCAACGAAGAGGGCTACACGAAGGAGATAAAATTGGACTTCATTGGGATAGAATTAACAGGATTTTGTATTTTGCAGTCTTGGAAAGAAAAATTCATCCTCAAATTTAGCCCTTTCTTCAAACAAAACAGATGGATTTGAAGAAATAATAGGGTTTTGATTATGCTTCCCGCCAAAAAGTGTCAACCCTAGTCAAACTTAGTTTTGTTAGTTAGATGTTATTTTTTTTAATTTTTTATAGTAAGTTTTATTTAGTCTTATAAAATTGAATAATTCTTGTATCGAGCGAGTTGCATTTGTTATGAAAAACTTCAATTTTTTTATGTAGTACTTCATACTCCCTATGTTCTGAATCTTCTTATATAATATATACGAAGTACAAGTTTTTGTTTTGTTGTGTTTTAAATGCATTCTTAATTAATACTCCATATATGTAATATAGTACATGAGAAAGTGGAGAATGTAATGTGCAAAATAGAAAATTGACTATAATGTGGGATGTTCGATTAGAAAAACGGGACTATAATTATGGGATGGAGGGAGTATTTGTTTGATTCGATCTTAGGTTCCGGTGAAAACCATCTTAGGGTGAGAACTTCTCTTAGACGGTTCTAAACGCAACCTGATTTTACTTGACGCAACCCTTTTTACTTTTATTTTTTTCATTCTAAAAAAACCCTATAAGCCTTCCTAGGAGACACAATTACTTCAAGTTTGTGATGAACTCATGACCATGAATGATTCAGATCCTTGATTCTCTGTGAGAAAAGGATTATAGTATTACACTACTACCATGTACCAACGGGCTAAAATTGACCATTTCATTACCCGACCTTGCTTTTGACCCGCACCAACCCTAGCCCGACCCGTCCAATAACCTGGTCTACTACTGACAGAGGAAACCATTGGTTTGCAGGTTGTTCGGGAGCATGATTCATTAGGGAGAGACGTTGAACTCTTTAGAAGGCACTTATATACCGAGAAAGGGGGACCTACTGTAAAAGGACGCGAAGGTGCTGAACTCGTGGAAGGACTTGAGATACACGAAGGGGATTATAAGTTGGTTAAGACGCGGTTTAGTGCATTCTTCGCTACACACCTTCATTCGTTTCTGCAGACTTCAGGAATTGATAGCTTGGTAATTGTTGGTAAGTGAAAACGAATTAAGCTTAATGTTTCAAGTTAGATTTTTTTCAACGATTTCTCTTTTGCAAAAGGTGCAGTTTTGAAGTTAGTTAGATCATGACCATCTATTACTATATATCCAGGAATTCAAACTCCTAATTGCATCAGGCAGACAGTATTTGATGCAGTAGCATTGGATTACCCTTCTGTATCTGTTATTGTTGATGCCACAGCTGCTAAAACTCCCGAAGTTCATTCTGGTAAGAGAGAAATAATTTGTTAATCTGTGCAATCAAAATTTCATCTGCTAATCTTATTTTCTGTTTTGATGAAAGAAATAGAAGTGTTAGTTCGTGTTTTTCTGTTGATCAGGGAAGCCTTATAGGCTGTTTCCAAGCGAAAACAGTTTAGTCACGTAATAATTCGGTGACAATTTGGAAATGGCTTAAATGTGTTATGACCATTTCCAAAGTGCATATGTTTGAGACAAACTATGTCATATCTAATAATCTACCAAGAAATGGTATGATAAAGAGTTCTGTTCTGATTAACTTCGGGGCAAGAAAAAAAAACTACGAGTCTCGTTCGGTATCGTTTTTTTTGTTTCCAGTTTTCTGTTTTATACAAAAACTAAAAACCAAAATATAAAAACCACAAAAAGTATAAGTTTACAGTTTTTTGTTGTCAGTTTTTAAAATCAACATGATTACTATAAGTATGGTTATTTTTAGGTTCATGATTCAATCTAAATCATATGACTTACAAAACCAAAAAAAAAAAAAAAAAACTCACATAGATACCGAACAGTTATCCTTTGCAATAGTGCCTTTTGCCTTAGTGGGATCTTTGATTACAGCCAAATATGGATCATTCTGTTCTGTTTTGGCTATATCATGTAAGTTGCTACTCTGTACTTGTATTAGATCGATTGTGGGTTAAGATTCTCGAGTTTCTCCAGTTGCATCCCCTTAATCAGTTGAACCGCCTTATTCATATTCATTTGTATTTCATTATGCTGTATTTACTGCATAATTCTCTGTTTTAGTTGATTTTTTCCTTTTTGGTATATCAGTTTTAATTTTAGGCAATAAGAGTTTAATCATATACGTGATCATATTCCGATTAATTCTTCCAAATGTTAATCTTATTCTTATATTTCAAATGTTCTTAATTACGAGTAAATGTTGTGAGTTTGTGACTAACAATGCATTGTGCTCTTCAATCAGCCAATATTTTTGACATGAAGAATATTGGGGTAGCCACTCCAACCTTGAGCGAATGGTGCGAGGCAAATTGATGCAAGTTTCTTACTTTGTTGTAACACCATTTTATATGGCCCTGTTAATAATGTACTTGCTAGTTGCTAGTTGTTGAGCCGCGATGGAAGGCAGCCCAAAAGGATTTTTGTACCATAAAGTCCATAACATACACTGATACACTTGTACTTCATCTATGTGCTGGAAAGATGAGTAATTCGCCTAAATGAATGATTATTTTTGTTTGATATAATGGTCTTTTTCTAAAGATATAGTATGGATTTTTAATTTTTTCTCCCCTCATTTGGATAAATTTAACACATTAATCAGGGTACAATATAAATTTTAACAAGAGAACATCTGGATTCTATCCCAGGTCTTGTGTATCCCAACTACCCCC ATGAATGTGGAGGATGATGAACCTCTTGATTTATCGCTTTCGCTTTGGCATGGAAGTTGCATAGGGAAAGAGAAAGTAATCAAGAAAGTGATCAAGAAAGAAGAAGAATATTATGATGGTGATCTATGTCTTTCTCTTTCTCTTTCTCCTTCTCCTTCTCCGTCTTTCTATTATGGAACTACTTCTATAGTTGTCTATGGAAGTACTTCTACTGATTCCGAAGCCGTCCCTTCTTCTCCAAACAATCAATTTCAACCGGAGTGGACATTCACAAAACACTTGTCAAAATCCGACTGTGATAAAGGTCAAGCCCGACTTTTGCTCAACAAGCCATGGGTGAAAAACAACGTAATTGAGAATGAATTACAGAGAGAAGAAGCCATTAAGAACGGTGGTATTTCGATTGATTTCTTTGATTGGGATGAAAAATATCTACTTGGATTGAAATTGAAGAGTTGGGTTGTTCGGGAGCATGATTCATTAGGGAGAGACGTTGAACTCTTTAGAAGGCACTTATATACCGAGAAAGGGGGACCTACTGTAAAAGGACGCGAAGGTGCTGAACTCGTGGAAGGACTTGAGATACACGAAGGGGATTATAAGTTGGTTAAGACGCGGTTTAGTGCATTCTTCGCTACACACCTTCATTCGTTTCTGCAGACTTCAGGAATTGATAGCTTGGTAATTGTTGGAATTCAAACTCCTAATTGCATCAGGCAGACAGTATTTGATGCAGTAGCATTGGATTACCCTTCTGTATCTGTTATTGTTGATGCCACAGCTGCTAAAACTCCCGAAGTTCATTCTGCCAATATTTTTGACATGAAGAATATTGGGGTAGCCACTCCAACCTTGAGCGAATGGTGCGAGGCAAATTGATGCAAGTTTCTTACTTTGTTGTAACACCATTTTATATGGCCCTGTTAATAATGTACTTGCTAGTTGCTAGTTGTTGAGCCGCGATGGAAGGCAGCCCAAAAGGATTTTTGTACCATAAAGTCCATAACATACACTGATACACTTGTACTTCATCTATGTGCTGGAAAGATGAGTAATTCGCCTAAATGAATGATTATTTTTGTTTGATATAATGGTCTTTTTCTAAAGATATAGTATGGATTTTTAATTTTTTCTCCCCTCATTTGGATAAATTTAACACATTAATCAGGGTACAATATAAATTTTAACAAGAGAACATCTGGATTCTATCCCAGGTCTTGTGTATCCCAACTACCCCC ATGAATGTGGAGGATGATGAACCTCTTGATTTATCGCTTTCGCTTTGGCATGGAAGTTGCATAGGGAAAGAGAAAGTAATCAAGAAAGTGATCAAGAAAGAAGAAGAATATTATGATGGTGATCTATGTCTTTCTCTTTCTCTTTCTCCTTCTCCTTCTCCGTCTTTCTATTATGGAACTACTTCTATAGTTGTCTATGGAAGTACTTCTACTGATTCCGAAGCCGTCCCTTCTTCTCCAAACAATCAATTTCAACCGGAGTGGACATTCACAAAACACTTGTCAAAATCCGACTGTGATAAAGGTCAAGCCCGACTTTTGCTCAACAAGCCATGGGTGAAAAACAACGTAATTGAGAATGAATTACAGAGAGAAGAAGCCATTAAGAACGGTGGTATTTCGATTGATTTCTTTGATTGGGATGAAAAATATCTACTTGGATTGAAATTGAAGAGTTGGGTTGTTCGGGAGCATGATTCATTAGGGAGAGACGTTGAACTCTTTAGAAGGCACTTATATACCGAGAAAGGGGGACCTACTGTAAAAGGACGCGAAGGTGCTGAACTCGTGGAAGGACTTGAGATACACGAAGGGGATTATAAGTTGGTTAAGACGCGGTTTAGTGCATTCTTCGCTACACACCTTCATTCGTTTCTGCAGACTTCAGGAATTGATAGCTTGGTAATTGTTGGAATTCAAACTCCTAATTGCATCAGGCAGACAGTATTTGATGCAGTAGCATTGGATTACCCTTCTGTATCTGTTATTGTTGATGCCACAGCTGCTAAAACTCCCGAAGTTCATTCTGCCAATATTTTTGACATGAAGAATATTGGGGTAGCCACTCCAACCTTGAGCGAATGGTGCGAGGCAAATTGA MNVEDDEPLDLSLSLWHGSCIGKEKVIKKVIKKEEEYYDGDLCLSLSLSPSPSPSFYYGTTSIVVYGSTSTDSEAVPSSPNNQFQPEWTFTKHLSKSDCDKGQARLLLNKPWVKNNVIENELQREEAIKNGGISIDFFDWDEKYLLGLKLKSWVVREHDSLGRDVELFRRHLYTEKGGPTVKGREGAELVEGLEIHEGDYKLVKTRFSAFFATHLHSFLQTSGIDSLVIVGIQTPNCIRQTVFDAVALDYPSVSVIVDATAAKTPEVHSANIFDMKNIGVATPTLSEWCEAN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02536.1 vs. NCBI nr
Match: gi|902230940|gb|KNA22050.1| (hypothetical protein SOVF_037590, partial [Spinacia oleracea]) HSP 1 Score: 319.7 bits (818), Expect = 5.300e-84 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 1
BLAST of Spo02536.1 vs. NCBI nr
Match: gi|902231917|gb|KNA22449.1| (hypothetical protein SOVF_033290 [Spinacia oleracea]) HSP 1 Score: 264.2 bits (674), Expect = 2.600e-67 Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 1
BLAST of Spo02536.1 vs. NCBI nr
Match: gi|731359614|ref|XP_010691375.1| (PREDICTED: uncharacterized protein LOC104904714 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 263.5 bits (672), Expect = 4.500e-67 Identity = 128/140 (91.43%), Postives = 132/140 (94.29%), Query Frame = 1
BLAST of Spo02536.1 vs. NCBI nr
Match: gi|330318641|gb|AEC10981.1| (isochorismatase hydrolase family protein [Camellia sinensis]) HSP 1 Score: 236.1 bits (601), Expect = 7.700e-59 Identity = 113/141 (80.14%), Postives = 129/141 (91.49%), Query Frame = 1
BLAST of Spo02536.1 vs. NCBI nr
Match: gi|828322558|ref|XP_012573053.1| (PREDICTED: probable inactive nicotinamidase At3g16190 [Cicer arietinum]) HSP 1 Score: 231.9 bits (590), Expect = 1.500e-57 Identity = 113/140 (80.71%), Postives = 124/140 (88.57%), Query Frame = 1
BLAST of Spo02536.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RR89_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_037590 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 3.700e-84 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 1
BLAST of Spo02536.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RU53_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_033290 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.800e-67 Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 1
BLAST of Spo02536.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ECW9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g221300 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 3.100e-67 Identity = 128/140 (91.43%), Postives = 132/140 (94.29%), Query Frame = 1
BLAST of Spo02536.1 vs. UniProtKB/TrEMBL
Match: F4YFC0_CAMSI (Isochorismatase hydrolase family protein OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 5.400e-59 Identity = 113/141 (80.14%), Postives = 129/141 (91.49%), Query Frame = 1
BLAST of Spo02536.1 vs. UniProtKB/TrEMBL
Match: A0A067KM17_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06317 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.700e-57 Identity = 113/141 (80.14%), Postives = 124/141 (87.94%), Query Frame = 1
BLAST of Spo02536.1 vs. ExPASy Swiss-Prot
Match: NIC4_ARATH (Probable inactive nicotinamidase At3g16190 OS=Arabidopsis thaliana GN=At3g16190 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 6.700e-55 Identity = 107/140 (76.43%), Postives = 120/140 (85.71%), Query Frame = 1
BLAST of Spo02536.1 vs. ExPASy Swiss-Prot
Match: RUTB_HALO1 (Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) GN=rutB PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.100e-9 Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 1
BLAST of Spo02536.1 vs. ExPASy Swiss-Prot
Match: RUTB_CAUST (Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=rutB PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.500e-9 Identity = 50/158 (31.65%), Postives = 79/158 (50.00%), Query Frame = 1
BLAST of Spo02536.1 vs. ExPASy Swiss-Prot
Match: RUTB_AGRFC (Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=rutB PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.300e-9 Identity = 51/177 (28.81%), Postives = 87/177 (49.15%), Query Frame = 1
BLAST of Spo02536.1 vs. ExPASy Swiss-Prot
Match: RUTB_ACIAD (Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=rutB PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.100e-8 Identity = 48/162 (29.63%), Postives = 76/162 (46.91%), Query Frame = 1
BLAST of Spo02536.1 vs. TAIR (Arabidopsis)
Match: AT3G16190.1 (Isochorismatase family protein) HSP 1 Score: 215.7 bits (548), Expect = 3.800e-56 Identity = 107/140 (76.43%), Postives = 120/140 (85.71%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02536.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02536.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02536.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo02536.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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